Citrus Sinensis ID: 025660

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAFNV
Secondary Structure (PSIPRED)
cccccccEEEcccccHHHHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHcccccccccEEEEccccccccHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHccccccccccccccccEEEHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEcccHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHcccccHHEEEEEccccccccHHHHHcccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEccccccccEcccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccEEEEcccEEEcccccccccHHHHHHHHHHcccccHHHHHHHHHccEEEHHHHHHHEEEEc
Coil and Loop (DISEMBL)
meegkgrvcvtggtgFIASWLIMRLLDHgysvtttvrseldpehrnskdlsflknlpgaseRLRIFHadlshpdgfdaaIAGCTGvlhvatpvdfedkepeeVITQRAINGTLGILKSCLKSGTVKRVVYTSsnaavfyndkdvdmmdetfWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGldlvtlipsmvvgpficpkfagSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAFNV
Flexible Loop (DISEMBL)
meegkgrvcvtgGTGFIASWLIMRLLDHGYSVTTTVrseldpehrnskdlsflkNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITqraingtlgilkSCLKSGTVKRVVYtssnaavfyndkdvdmMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAFNV
Low Complexity Region (SEG)
MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAFNV
Disordered region (IsUnstruct)
******RVCVTGGTGFIASWLIMRLLDHGYSVTTTV****************L**L*GASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAF**
Disordered Region (DISOPRED)
****KGR*CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAFNV
Disordered Region (DISEMBL)
MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAFNV
Disordered Region (DISPRO)
****KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAFNV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAFNV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	249	2.2.26 [Sep-21-2011]
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.867	0.610	0.470	5e-54
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.839	0.600	0.471	3e-52
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.839	0.602	0.467	5e-52
P51102	382	Dihydroflavonol-4-reducta	no	no	0.867	0.565	0.470	7e-51
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.831	0.544	0.472	2e-50
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.839	0.580	0.476	8e-50
P51109	217	Dihydroflavonol-4-reducta	N/A	no	0.799	0.917	0.475	2e-49
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.855	0.581	0.450	5e-49
Q500U8	326	Tetraketide alpha-pyrone	no	no	0.859	0.656	0.469	5e-49
P51110	337	Dihydroflavonol-4-reducta	no	no	0.831	0.614	0.462	8e-49

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  211 bits (536), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 148/221 (66%), Gaps = 5/221 (2%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M+  KG V VTG +GF+ SWL+M+LL  GY+V  TVR   DP   N +    L  LPGA 
Sbjct: 1   MDGNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVR---DPA--NVEKTKPLLELPGAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERL I+ ADLS    F+ AIAGCTGV HVATP+DF+ ++PE  + +  + G L I+++C 
Sbjct: 56  ERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACK 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           ++GTVKR+V+TSS  +V   ++     D+  WSD+DY R++   G  Y +SK L E+AA+
Sbjct: 116 EAGTVKRIVFTSSAGSVNIEERPRPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAM 175

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           E+A E+GLD +++IP++VVGPF+      S+ ++LALI GN
Sbjct: 176 EYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGN 216

Hordeum vulgare (taxid: 4513)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1EC: 9

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  205 bits (521), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 101/214 (47%), Positives = 143/214 (66%), Gaps = 5/214 (2%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+MRLL+HGY+V  TVR   DP   N K +  L +LP A   L ++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLEHGYTVRATVR---DP--TNQKKVKHLLDLPKAETHLTLWK 62

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GC+GV HVATP+DFE K+PE  + +  ING L ILK+C K+ TV++
Sbjct: 63  ADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRK 122

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG 187
           +V+TSS   V   +    + DE+ WSDV++ R +   G  Y +SKTL E+AA ++A+E+ 
Sbjct: 123 LVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENN 182

Query: 188 LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           +D +T+IP++V+GPF+ P    S+ + L+ IL N
Sbjct: 183 IDFITIIPTLVIGPFLMPSMPPSLITGLSPILRN 216

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  204 bits (519), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 100/214 (46%), Positives = 143/214 (66%), Gaps = 5/214 (2%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+MRLL+HGY+V  TVR   DP   N K +  L +LP A   L ++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLEHGYTVRATVR---DP--TNQKKVKHLLDLPKAETHLTLWK 62

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GC+GV HVATP+DFE ++PE  + +  ING L ILK+C K+ TV++
Sbjct: 63  ADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRK 122

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG 187
           +V+TSS   V   +    + DE+ WSDV++ R +   G  Y +SKTL E+AA ++A+E+ 
Sbjct: 123 LVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENN 182

Query: 188 LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           +D +T+IP++V+GPF+ P    S+ + L+ IL N
Sbjct: 183 IDFITIIPTLVIGPFLMPSMPPSLITGLSPILRN 216

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  200 bits (509), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 104/221 (47%), Positives = 141/221 (63%), Gaps = 5/221 (2%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M   K  VCVTG +GFI SWL+MRLL+ GY V  TVR   DP   N K +  L +LP A 
Sbjct: 1   MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVR---DP--GNLKKVQHLLDLPNAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
             L ++ ADLS    +D AI GC GV HVATP+DFE K+PE  + +  +NG LGI+K+C+
Sbjct: 56  TLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACV 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           K+ TV+R V+TSS   V   +   ++ DE  WSD+++I      G  Y +SKTL E+AA 
Sbjct: 116 KAKTVRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAW 175

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           +FAEE GLD +++IP++VVGPFI      S+ ++L+ I  N
Sbjct: 176 DFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRN 216

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  199 bits (505), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG  GFI SWL+MRLL+ GY+V  TVR   DPE  N K +  L  LP A   L ++ 
Sbjct: 18  VCVTGAAGFIGSWLVMRLLERGYNVHATVR---DPE--NKKKVKHLLELPKADTNLTLWK 72

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GC GV HVATP+DFE K+PE  + +  + G L I++SC K+ TVKR
Sbjct: 73  ADLTVEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKR 132

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERAALEFAEE 185
           +V+TSS   +   ++     D+T WSD+D+I  +K+  W   Y  SK L E+AA+E A++
Sbjct: 133 LVFTSSAGTLDVQEQQKLFYDQTSWSDLDFIYAKKMTGW--MYFASKILAEKAAMEEAKK 190

Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
             +D +++IP +VVGPFI P F  S+ ++L+LI GN
Sbjct: 191 KNIDFISIIPPLVVGPFITPTFPPSLITALSLITGN 226

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  197 bits (500), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 103/216 (47%), Positives = 142/216 (65%), Gaps = 7/216 (3%)

Query: 4   GKGR-VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
           G+G  VCVTG +GFI SWLIMRLL+ GY+V  TVR   DP+  N+K +  L +LP A   
Sbjct: 20  GQGETVCVTGASGFIGSWLIMRLLERGYTVRATVR---DPD--NTKKVQHLLDLPNAKTN 74

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           L ++ ADL     FDAA+ GCTGV H+ATP+DFE K+PE  + +  ING L ILKSC+K+
Sbjct: 75  LTLWKADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPENEMIKPTINGMLDILKSCVKA 134

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
             ++RVV+TSS   V        + DET WS +D+IR +   G  Y +SK L E+AA ++
Sbjct: 135 -KLRRVVFTSSGGTVNVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKY 193

Query: 183 AEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI 218
           A E+ L+ +++IP +VVGPFI P    S+ ++L+ I
Sbjct: 194 AAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPI 229

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51109|DFRA_MEDSA Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1

 Score =  195 bits (496), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/204 (47%), Positives = 135/204 (66%), Gaps = 5/204 (2%)

Query: 18  ASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD 77
            SWL+MRL++ GY V  TVR   DPE  N K +S L  LPGA  +L I+ ADL     FD
Sbjct: 1   GSWLVMRLMEPGYMVRATVR---DPE--NLKKVSPLLELPGAKSKLSIWKADLGEEGSFD 55

Query: 78  AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAV 137
            AI GCTGV HVATP+DFE K+PE  + +  I G L I+K+CLK+ TV+R++YTSS   +
Sbjct: 56  EAIKGCTGVFHVATPMDFESKDPENEMIKPTIKGVLDIMKACLKAKTVRRLIYTSSAGTL 115

Query: 138 FYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSM 197
              +    + DE+ WSDV++ R++   G  Y +SKTL E+ A +FA+EH +D++T+IP +
Sbjct: 116 NVTEDQKPLWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPL 175

Query: 198 VVGPFICPKFAGSVRSSLALILGN 221
           VVGPF+ P    S+ ++L+ I GN
Sbjct: 176 VVGPFLIPTMPPSLITALSPITGN 199

Medicago sativa (taxid: 3879)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  194 bits (493), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 100/222 (45%), Positives = 144/222 (64%), Gaps = 9/222 (4%)

Query: 2   EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
           E+    VCVTG  GFI SWL+MRLL+ GY V  TVR   DP   + K +  L  LP A  
Sbjct: 3   EDSPATVCVTGAAGFIGSWLVMRLLERGYVVHATVR---DP--GDLKKVKHLLELPKAQT 57

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
            L+++ ADL+    FD AI GC GV H+ATP+DFE K+PE  I +  I G L I++SC+K
Sbjct: 58  NLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVK 117

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERAA 179
           + TVK++V+TSS   V   +K + + DE+ WSD+D+I  +K+ +W   Y +SKTL E+AA
Sbjct: 118 AKTVKKLVFTSSAGTVNGQEKQLHVYDESHWSDLDFIYSKKMTAW--MYFVSKTLAEKAA 175

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
            +  + + +  +++IP++VVGPFI   F  S+ ++L+LI GN
Sbjct: 176 WDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGN 217

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  194 bits (493), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 106/226 (46%), Positives = 142/226 (62%), Gaps = 12/226 (5%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M++ KG+VCVTG +GF+ASWL+ RLL  GY V  TVR   DP   N K L+ L  L GA 
Sbjct: 1   MDQAKGKVCVTGASGFLASWLVKRLLLEGYEVIGTVR---DP--GNEKKLAHLWKLEGAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERLR+  ADL     FD AI GC GV H A+PV      PEE I + AI GTL +L+SC 
Sbjct: 56  ERLRLVKADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCR 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVD---MMDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
           K+ ++KRVV TSS++ V   D D D    +DE+ W+ V+  ++   W   YA+SKTL E+
Sbjct: 116 KNPSLKRVVLTSSSSTVRIRD-DFDPKIPLDESIWTSVELCKRFQVW---YALSKTLAEQ 171

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK 223
           AA +F+EE+G+DLVT++PS +VGP + P    +    L L+ G  +
Sbjct: 172 AAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETE 217

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  193 bits (491), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 100/216 (46%), Positives = 142/216 (65%), Gaps = 9/216 (4%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+MRLL+   +V  TVR   DP   N K +  L +LP A   L ++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLERRLTVRATVR---DP--TNVKKVKHLLDLPKAETHLTLWK 62

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GCTGV HVATP+DFE K+PE  + +  I G LGI+KSC  + TV+R
Sbjct: 63  ADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRR 122

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAALEFAEE 185
           +V+TSS   V   +  + + DE+ WSD+++ R  K+ +W   Y +SKTL E+AA ++A+E
Sbjct: 123 LVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW--MYFVSKTLAEQAAWKYAKE 180

Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           + +D +T+IP++VVGPFI      S+ ++L+ I GN
Sbjct: 181 NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN 216

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
225453897	327	PREDICTED: dihydroflavonol-4-reductase [	0.879	0.669	0.677	1e-84
147769574	327	hypothetical protein VITISV_025424 [Viti	0.879	0.669	0.677	2e-84
224063846	327	predicted protein [Populus trichocarpa]	0.915	0.697	0.660	2e-84
225453895	327	PREDICTED: dihydroflavonol-4-reductase [	0.879	0.669	0.668	4e-84
225453889	335	PREDICTED: dihydroflavonol-4-reductase i	0.871	0.647	0.687	1e-82
296089142	665	unnamed protein product [Vitis vinifera]	0.871	0.326	0.687	2e-82
225453893	351	PREDICTED: dihydroflavonol-4-reductase-l	0.907	0.643	0.635	8e-79
357506835	328	Dihydroflavonol-4-reductase [Medicago tr	0.971	0.737	0.582	2e-78
124360310	283	NAD-dependent epimerase/dehydratase [Med	0.975	0.858	0.582	2e-78
124360303	329	NAD-dependent epimerase/dehydratase [Med	0.975	0.738	0.582	3e-78

>gi|225453897|ref|XP_002278913.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296089144|emb|CBI38847.3| unnamed protein product [Vitis vinifera]

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 151/223 (67%), Positives = 184/223 (82%), Gaps = 4/223 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KGRVCVTGGTGFIASWL+M+LL HGYSV  T+RS   P+ +  KD+S+L NLPGAS
Sbjct: 1   MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSH--PQSK--KDVSYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+LRI++ADLS P  F+AAI GC GV HVA P+DFED EPEE +T+R++ GTLGILK+CL
Sbjct: 57  EKLRIYNADLSDPSSFEAAIEGCIGVFHVAHPIDFEDTEPEETVTKRSVEGTLGILKACL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS +AV YNDK  D+ DE+ WSDVD+++ L+ WG SY ISKT+TERAAL
Sbjct: 117 NSKTVKRVVYTSSTSAVEYNDKGGDIKDESSWSDVDFLKALNYWGLSYMISKTMTERAAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK 223
           +FA EHGLDLVT+IPS VVGPFICP+F GSV ++LAL+LG+ +
Sbjct: 177 DFAHEHGLDLVTVIPSFVVGPFICPRFPGSVNAALALVLGDQQ 219

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769574|emb|CAN76937.1| hypothetical protein VITISV_025424 [Vitis vinifera]

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 151/223 (67%), Positives = 184/223 (82%), Gaps = 4/223 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KGRVCVTGGTGFIASWL+M+LL HGYSV  T+RS   P+ +  KD+S+L NLPGAS
Sbjct: 1   MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSH--PQSK--KDVSYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+LRI++ADLS P  F+AAI GC GV HVA PVDFED EPEE +T+R++ GTLGILK+CL
Sbjct: 57  EKLRIYNADLSDPSSFEAAIEGCNGVFHVAHPVDFEDTEPEETVTKRSVEGTLGILKACL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS++AV YNDK  ++ DE+ WSDVD+++ L+ WG SY ISKT TERAAL
Sbjct: 117 NSKTVKRVVYTSSSSAVEYNDKGGNIKDESSWSDVDFLKALNYWGXSYMISKTXTERAAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK 223
           +FA EHGLDLVT+IPS VVGPFICP+F GSV ++LAL+LG+ +
Sbjct: 177 DFAHEHGLDLVTVIPSFVVGPFICPRFPGSVNTALALVLGDQQ 219

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063846|ref|XP_002301290.1| predicted protein [Populus trichocarpa] gi|222843016|gb|EEE80563.1| predicted protein [Populus trichocarpa]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/233 (66%), Positives = 188/233 (80%), Gaps = 5/233 (2%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KG+VCVTGGTGF+ASWLIMRLL+HGYSV TT+R   DPEH+  +D+SFL +LP AS
Sbjct: 1   MEGDKGKVCVTGGTGFLASWLIMRLLEHGYSVHTTIRP--DPEHK--RDVSFLTSLPEAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+L+IF ADLS P+ F+ AI GC GV HVATPVDFE KEPEEV+ QRAI+GTLGILK+CL
Sbjct: 57  EKLQIFQADLSDPNSFEVAIKGCIGVFHVATPVDFESKEPEEVVVQRAIDGTLGILKACL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS AAV +ND DVD MDE++W+DV+Y++ L S+   Y ISKTLTE+ AL
Sbjct: 117 NSMTVKRVVYTSSGAAVVFNDSDVDTMDESYWTDVEYVKALKSFAGPYFISKTLTEKRAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRS 233
           EFA+EHG DLV++IPS + GPFIC KF GSV +SLA++LG  + K   ++N S
Sbjct: 177 EFADEHGFDLVSIIPSFINGPFICSKFPGSVHTSLAMVLGE-QQKYGTLLNMS 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453895|ref|XP_002278887.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296089143|emb|CBI38846.3| unnamed protein product [Vitis vinifera]

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 149/223 (66%), Positives = 184/223 (82%), Gaps = 4/223 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KGRVCVTGGTGFIASWL+M+LL HGYSV  T+RS   P+ +  KD+S+L NLPGAS
Sbjct: 1   MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSH--PQSK--KDVSYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+LRI++ADLS P  F+AAI GC GV HVA PVDFED EPEE +T+R++ GTLGILK+CL
Sbjct: 57  EKLRIYNADLSDPSSFEAAIEGCIGVFHVAHPVDFEDTEPEETVTKRSVEGTLGILKACL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS AAV  NDK  D+ DE+ W+DVD+++ L+ WG+SY ISKT+TER+AL
Sbjct: 117 NSKTVKRVVYTSSTAAVVLNDKGGDIKDESSWTDVDFLKALNYWGQSYMISKTITERSAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK 223
           +FA+EHGLDLVT+ PS VVGPFICP+F GSV ++LAL+LG+ +
Sbjct: 177 DFAQEHGLDLVTVTPSFVVGPFICPRFPGSVNTALALVLGDQQ 219

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453889|ref|XP_002278819.1| PREDICTED: dihydroflavonol-4-reductase isoform 1 [Vitis vinifera]

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/221 (68%), Positives = 174/221 (78%), Gaps = 4/221 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KG+VCVTGGTGFIASWLIM+LL HGYSV  T+RS   P+ +  KD+ +L NLPGAS
Sbjct: 1   MEGEKGKVCVTGGTGFIASWLIMKLLQHGYSVNATIRSH--PQIK--KDIRYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERL+IF ADLS P  FDAAI GC GV HVA PVDFE+ EP+E + +R++ GTLGILK CL
Sbjct: 57  ERLQIFKADLSEPQSFDAAIEGCIGVFHVAHPVDFEEGEPQETVIRRSVEGTLGILKGCL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           KS TVKRVVYTSS AAV YN+KD D+MDE+ WSD+D I  +   G SY ISKT  ERAAL
Sbjct: 117 KSKTVKRVVYTSSTAAVVYNNKDEDIMDESSWSDIDVINSIKPLGSSYVISKTRIERAAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           EFAE+HGLDLV+LIPS VVGPFICP F GSV   LA+ILGN
Sbjct: 177 EFAEQHGLDLVSLIPSFVVGPFICPGFPGSVHLILAMILGN 217

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089142|emb|CBI38845.3| unnamed protein product [Vitis vinifera]

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 152/221 (68%), Positives = 174/221 (78%), Gaps = 4/221 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KG+VCVTGGTGFIASWLIM+LL HGYSV  T+RS   P+ +  KD+ +L NLPGAS
Sbjct: 1   MEGEKGKVCVTGGTGFIASWLIMKLLQHGYSVNATIRSH--PQIK--KDIRYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERL+IF ADLS P  FDAAI GC GV HVA PVDFE+ EP+E + +R++ GTLGILK CL
Sbjct: 57  ERLQIFKADLSEPQSFDAAIEGCIGVFHVAHPVDFEEGEPQETVIRRSVEGTLGILKGCL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           KS TVKRVVYTSS AAV YN+KD D+MDE+ WSD+D I  +   G SY ISKT  ERAAL
Sbjct: 117 KSKTVKRVVYTSSTAAVVYNNKDEDIMDESSWSDIDVINSIKPLGSSYVISKTRIERAAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           EFAE+HGLDLV+LIPS VVGPFICP F GSV   LA+ILGN
Sbjct: 177 EFAEQHGLDLVSLIPSFVVGPFICPGFPGSVHLILAMILGN 217

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453893|ref|XP_002278874.1| PREDICTED: dihydroflavonol-4-reductase-like [Vitis vinifera]

 Score =  299 bits (765), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 148/233 (63%), Positives = 180/233 (77%), Gaps = 7/233 (3%)

Query: 2   EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSK-DLSFLKNLPGAS 60
           E  KGRVCVTGGTGFIASWLIM+LL HGYSV  T+RS     H  SK D+S++ NLPGAS
Sbjct: 26  ENEKGRVCVTGGTGFIASWLIMKLLQHGYSVNATIRS-----HPGSKKDISYITNLPGAS 80

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+L+IF+ADLS P  F+ A+ GC GV HVA PVDFE +EPEE +T+R++ GTL ILK+CL
Sbjct: 81  EKLQIFNADLSEPHSFEPALEGCIGVFHVAHPVDFEAREPEETVTRRSVEGTLAILKACL 140

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS +AV +NDKD DM DE+ WSDV++IR L S+   Y ISKT TERAAL
Sbjct: 141 NSKTVKRVVYTSSASAVVFNDKDEDMKDESSWSDVEFIRSLGSFAGPYMISKTETERAAL 200

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRS 233
           EFAE+HGLDLVTL+PS VVGPF+CP   GSV+ +L +I G ++ +   +MN S
Sbjct: 201 EFAEKHGLDLVTLLPSFVVGPFLCPFLPGSVQMALTMIKG-IQDQYQNLMNTS 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506835|ref|XP_003623706.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355498721|gb|AES79924.1| Dihydroflavonol-4-reductase [Medicago truncatula]

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/247 (58%), Positives = 186/247 (75%), Gaps = 5/247 (2%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           MEEGKGRVCVTGGTGFI SW+I RLL+ GY+V TTVRS  +P  +  KD+S+L NLP AS
Sbjct: 1   MEEGKGRVCVTGGTGFIGSWIIKRLLEDGYTVNTTVRS--NPGQK--KDVSYLTNLPNAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           + L+IF+ADL +P+ FDAAI GC G+ H ATP+DFE+ E EE++T+R I+G LGILK+C 
Sbjct: 57  QNLQIFNADLCNPESFDAAIEGCIGIFHTATPIDFEENEREEIVTKRTIDGALGILKACK 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRV+YTSS +AV+  DK+ D+MDE++WSDV+ +R L  +  SYA+SKTL E+A L
Sbjct: 117 NSKTVKRVIYTSSASAVYMQDKEEDVMDESYWSDVNILRNLKPFAWSYAVSKTLAEKAVL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA 240
           EF E+HGLD+VTL+PS VVGPFICPK  GS+ SSLA + G++        +R H + V  
Sbjct: 177 EFGEQHGLDIVTLVPSFVVGPFICPKLPGSIFSSLAFLFGDIDNNPLAA-SRLHMVHVDD 235

Query: 241 IAFAFAF 247
           +A A  F
Sbjct: 236 VARAHIF 242

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124360310|gb|ABN08323.1| NAD-dependent epimerase/dehydratase [Medicago truncatula]

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/247 (58%), Positives = 188/247 (76%), Gaps = 4/247 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME+GKGRVCVTGGTGFI SW+I RLL+ GY+V TTVRS  +P  +  KD+SFL +LP AS
Sbjct: 1   MEKGKGRVCVTGGTGFIGSWIIKRLLEDGYTVNTTVRS--NPGQK--KDVSFLTDLPNAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ++L+IF+ADLS+P+ F+AAI GC GV H ATPVDFE KEPEE++ +R I+G LGILK+C 
Sbjct: 57  QKLQIFNADLSNPESFNAAIEGCIGVFHTATPVDFELKEPEEIVIKRTIDGALGILKACK 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS +AV   +K+V++MDE++WSDV+ +R L  +  SYA+SKTL E+A L
Sbjct: 117 NSKTVKRVVYTSSASAVCMQNKEVEVMDESYWSDVNNLRTLKPFAWSYAVSKTLAEKAVL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA 240
           EF E+HGLD+VTL+P+ VVGPFICPK   SV SSLA + G +      +++R+  + V  
Sbjct: 177 EFGEQHGLDIVTLLPTFVVGPFICPKLPSSVHSSLAFLFGGINKNPLMLVSRTGMVHVDD 236

Query: 241 IAFAFAF 247
           +A A  F
Sbjct: 237 VARAHIF 243

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124360303|gb|ABN08316.1| NAD-dependent epimerase/dehydratase [Medicago truncatula]

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 144/247 (58%), Positives = 186/247 (75%), Gaps = 4/247 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           MEEGKGRVCVTGGTGFI SW+I RLL+ GY+V TTVRS  +P  +  KD+S+L NLP AS
Sbjct: 1   MEEGKGRVCVTGGTGFIGSWIIKRLLEDGYTVNTTVRS--NPAGQ-KKDVSYLTNLPNAS 57

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           + L+IF+ADL +P+ FDAAI GC G+ H ATP+DFE+ E EE++T+R I+G LGILK+C 
Sbjct: 58  QNLQIFNADLCNPESFDAAIEGCIGIFHTATPIDFEENEREEIVTKRTIDGALGILKACK 117

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRV+YTSS +AV+  DK+ D+MDE++WSDV+ +R L  +  SYA+SKTL E+A L
Sbjct: 118 NSKTVKRVIYTSSASAVYMQDKEEDVMDESYWSDVNILRNLKPFAWSYAVSKTLAEKAVL 177

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA 240
           EF E+HGLD+VTL+PS VVGPFICPK  GS+ SSLA + G++        +R H + V  
Sbjct: 178 EFGEQHGLDIVTLVPSFVVGPFICPKLPGSIFSSLAFLFGDIDNNPLAA-SRLHMVHVDD 236

Query: 241 IAFAFAF 247
           +A A  F
Sbjct: 237 VARAHIF 243

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
TAIR|locus:2050882	364	BEN1 [Arabidopsis thaliana (ta	0.871	0.596	0.52	4.4e-52
TAIR|locus:2165427	382	DFR "dihydroflavonol 4-reducta	0.859	0.560	0.470	3.7e-48
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.859	0.656	0.469	2.3e-46
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.835	0.638	0.463	4e-42
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.843	0.646	0.445	3.6e-41
TAIR|locus:2195733	340	BAN "BANYULS" [Arabidopsis tha	0.839	0.614	0.434	9.6e-41
TAIR|locus:2033394	319	AT1G66800 [Arabidopsis thalian	0.835	0.652	0.426	4.2e-40
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.851	0.658	0.417	2.3e-39
TAIR|locus:2012250	369	AT1G09480 [Arabidopsis thalian	0.839	0.566	0.416	1.3e-38
TAIR|locus:2012265	322	AT1G09490 [Arabidopsis thalian	0.823	0.636	0.416	2.1e-38

TAIR|locus:2050882 BEN1 [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 117/225 (52%), Positives = 144/225 (64%)

Query:     6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
             G VCVTGG+GF+ASWLIMRLL  GYSV  TVR+  +    N KD+S+L  LP ASERL+I
Sbjct:    38 GLVCVTGGSGFVASWLIMRLLQRGYSVRATVRTNSEG---NKKDISYLTELPFASERLQI 94

Query:    66 FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             F ADL+ P+ F  AI GC  V HVA P+D    E EE +T+R + G +GILKSCL + TV
Sbjct:    95 FTADLNEPESFKPAIEGCKAVFHVAHPMDPNSNETEETVTKRTVQGLMGILKSCLDAKTV 154

Query:   126 KRVVYTSSNAAVFY---NDKDVDMMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAAL 180
             KR  YTSS   VFY   N      +DE+ WSDV+  R  K      SY +SK   E AAL
Sbjct:   155 KRFFYTSSAVTVFYSGGNGGGGGEVDESVWSDVEVFRNQKEKRVSSSYVVSKMAAETAAL 214

Query:   181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK 225
             EF  ++GL++VTL+  +VVGPFI      SV  SLA++ GN K K
Sbjct:   215 EFGGKNGLEVVTLVIPLVVGPFISSSLPSSVFISLAMLFGNYKEK 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009813 "flavonoid biosynthetic process" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0010422 "regulation of brassinosteroid biosynthetic process" evidence=IMP

GO:0016131 "brassinosteroid metabolic process" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2165427 DFR "dihydroflavonol 4-reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 105/223 (47%), Positives = 144/223 (64%)

Query:     1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
             M   K  VCVTG +GFI SWL+MRLL+ GY V  TVR   DP   N K +  L +LP A 
Sbjct:     1 MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVR---DPG--NLKKVQHLLDLPNAK 55

Query:    61 ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
               L ++ ADLS    +D AI GC GV HVATP+DFE K+PE  + +  +NG LGI+K+C+
Sbjct:    56 TLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACV 115

Query:   121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERA 178
             K+ TV+R V+TSS   V   +   ++ DE  WSD+++I  +K+  W   Y +SKTL E+A
Sbjct:   116 KAKTVRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGW--MYFVSKTLAEKA 173

Query:   179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
             A +FAEE GLD +++IP++VVGPFI      S+ ++L+ I  N
Sbjct:   174 AWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRN 216

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=TAS

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA;IMP;TAS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=IMP;TAS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 106/226 (46%), Positives = 142/226 (62%)

Query:     1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
             M++ KG+VCVTG +GF+ASWL+ RLL  GY V  TVR   DP   N K L+ L  L GA 
Sbjct:     1 MDQAKGKVCVTGASGFLASWLVKRLLLEGYEVIGTVR---DPG--NEKKLAHLWKLEGAK 55

Query:    61 ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
             ERLR+  ADL     FD AI GC GV H A+PV      PEE I + AI GTL +L+SC 
Sbjct:    56 ERLRLVKADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCR 115

Query:   121 KSGTVKRVVYTSSNAAVFYNDKDVDM---MDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
             K+ ++KRVV TSS++ V   D D D    +DE+ W+ V+  ++   W   YA+SKTL E+
Sbjct:   116 KNPSLKRVVLTSSSSTVRIRD-DFDPKIPLDESIWTSVELCKRFQVW---YALSKTLAEQ 171

Query:   178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK 223
             AA +F+EE+G+DLVT++PS +VGP + P    +    L L+ G  +
Sbjct:   172 AAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETE 217

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 103/222 (46%), Positives = 135/222 (60%)

Query:     4 GKGRV-CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
             G+G+V CVTG +G+IASWL+  LL  GY+V  +VR   DP     K    L +L GA ER
Sbjct:     5 GEGKVVCVTGASGYIASWLVKFLLSRGYTVKASVRDPSDP-----KKTQHLVSLEGAKER 59

Query:    63 LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             L +F ADL     FD+AI GC GV H A+P   + K+P+  +   A+ GTL +L SC K+
Sbjct:    60 LHLFKADLLEQGSFDSAIDGCHGVFHTASPFFNDAKDPQAELIDPAVKGTLNVLNSCAKA 119

Query:   123 GTVKRVVYTSSNAAVFYNDK----DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA 178
              +VKRVV TSS AAV YN K    DV + DET++SD +       W   Y +SKTL E A
Sbjct:   120 SSVKRVVVTSSMAAVGYNGKPRTPDVTV-DETWFSDPELCEASKMW---YVLSKTLAEDA 175

Query:   179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
             A + A+E GLD+VT+ P+MV+GP + P    S  + L LI G
Sbjct:   176 AWKLAKEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLING 217

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 99/222 (44%), Positives = 139/222 (62%)

Query:     2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
             EE K  VCVTG +G+IASW++  LL  GY+V  +VR   DP  R ++ L  L+   GA E
Sbjct:     4 EEEK-TVCVTGASGYIASWIVKLLLLRGYTVKASVRDPNDP--RKTEHLLALE---GAEE 57

Query:    62 RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
             RL++F A+L     FD+AI GC GV H A+P   + K+P+  +   A+ GT+ +L SCLK
Sbjct:    58 RLKLFKANLLEEGSFDSAIDGCEGVFHTASPFYHDVKDPQAELLDPAVKGTINVLSSCLK 117

Query:   122 SGTVKRVVYTSSNAAVFYNDKD---VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA 178
             + +VKRVV TSS AAV +N        ++DET+++D DY R    W   Y +SKTL E A
Sbjct:   118 TSSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLW---YVLSKTLAENA 174

Query:   179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
             A +FA+E+ L LV++ P+MV+GP + P    S  + L+LI G
Sbjct:   175 AWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKG 216

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2195733 BAN "BANYULS" [Arabidopsis thaliana (taxid:3702)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 96/221 (43%), Positives = 142/221 (64%)

Query:     4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
             G  + CV GGTG +AS LI  LL  GY V TTVR   DPE  N K ++ L+ L    + L
Sbjct:     9 GSKKACVIGGTGNLASILIKHLLQSGYKVNTTVR---DPE--NEKKIAHLRKLQELGD-L 62

Query:    64 RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
             +IF ADL+  D F+++ +GC  + HVATP++F+ ++PE+ + + AI G + +LKSCLKS 
Sbjct:    63 KIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSK 122

Query:   124 TVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYI--RKLDSWGKSYAISKTLTERAA 179
             +VKRV+YTSS AAV  N+      +M+E  W+DV+++   K  +WG  Y ISK L E+ A
Sbjct:   123 SVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWG--YPISKVLAEKTA 180

Query:   180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
              EFA+E+ ++LVT+IP+++ G  +      S+  S++ I G
Sbjct:   181 WEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITG 221

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0033729 "anthocyanidin reductase activity" evidence=IDA

GO:0009964 "negative regulation of flavonoid biosynthetic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=ISS

TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 93/218 (42%), Positives = 133/218 (61%)

Query:     4 GKGRV-CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
             G+G+V CVTG +G+IASW++  LL  GY+V  TVR+ +D     +K  + L  L GASER
Sbjct:     3 GEGKVVCVTGASGYIASWIVKLLLLRGYTVRATVRNPMD-----TKKTNHLLTLEGASER 57

Query:    63 LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             L++F +DL     FD AI GC GV H A+PV     +P+  +   A+NGTL +L++C K 
Sbjct:    58 LKLFKSDLLEEGSFDQAIEGCDGVFHTASPVSLTVTDPQTEMIDPAVNGTLNVLRTCAKV 117

Query:   123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
              +VKRV+ TSS AA    + + D++DET ++D+     + +W   Y  SKTL E  A  F
Sbjct:   118 SSVKRVIVTSSTAATLSINPN-DVVDETVFTDLSVYLAMKAW---YGYSKTLAEETAWRF 173

Query:   183 AEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
             A+E+G+DLV + P  V+GP + P    SV   + LI G
Sbjct:   174 AKENGIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLING 211

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 93/223 (41%), Positives = 131/223 (58%)

Query:     1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
             M +G   VCVTG +G++ASW++  LL  GY+V  TVR   DP   + K    L  L GA 
Sbjct:     1 MADGGKMVCVTGASGYVASWIVKLLLLRGYTVRATVR---DPS--DEKKTEHLLALDGAK 55

Query:    61 ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
             E+L++F ADL     F+ AI GC  V H A+PV     +P+  +   A+ GTL +LK+C 
Sbjct:    56 EKLKLFKADLLEEGSFEQAIEGCDAVFHTASPVSLTVTDPQIELIDPAVKGTLNVLKTCA 115

Query:   121 KSGTVKRVVYTSSNAAVFYNDKDV---DMMDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
             K  +VKRV+ TSS AAV + +  +   D++DE+ +SD ++  +   W   YA+SKTL E 
Sbjct:   116 KVSSVKRVIVTSSMAAVLFREPTLGPNDLVDESCFSDPNFCTEKKLW---YALSKTLAED 172

Query:   178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
              A  FA+E GLDLV + P +V+GP + P    SV   + LI G
Sbjct:   173 EAWRFAKEKGLDLVVINPGLVLGPLLKPSLTFSVNVIVELITG 215

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012250 AT1G09480 [Arabidopsis thaliana (taxid:3702)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 92/221 (41%), Positives = 129/221 (58%)

Query:     4 GKGR-VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
             G G+ VCVTG +G+IASW++  LL  GY+V  TVR   D      K    L  L GA ER
Sbjct:    50 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTD-----RKKTEHLLALDGAKER 104

Query:    63 LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             L++F ADL     F+ AI GC  V H A+PV F  K+P+  +   A+ GT+ +L +C ++
Sbjct:   105 LKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTMNVLNTCKET 164

Query:   123 GTVKRVVYTSSNAAVFYNDKDV---DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
              +V+RV+ TSS AAV +    V   D++DETF+SD    R+  +W   Y +SK L E AA
Sbjct:   165 PSVRRVILTSSTAAVLFRQPPVEASDVVDETFFSDPSLCRETKNW---YPLSKILAENAA 221

Query:   180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
              EFA+++G+D+V L P  + GP + P    SV   +  I G
Sbjct:   222 WEFAKDNGIDMVVLNPGFIFGPLLQPTLNFSVELIVDFING 262

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 90/216 (41%), Positives = 127/216 (58%)

Query:     8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
             VCVTG +G+IASW++  LL  GY+V  TVR   DP  ++ K    L  L GA ERL++F 
Sbjct:     8 VCVTGASGYIASWIVKLLLLRGYTVNATVR---DP--KDKKKTEHLLALDGAKERLKLFK 62

Query:    68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
             ADL     FD AI GC  V H A+PV F   +P+  +   A+ GT+ +L +C +  +VKR
Sbjct:    63 ADLLEESSFDQAIDGCDAVFHTASPVLFTVTDPQTELIDPALKGTINVLNTCKQVSSVKR 122

Query:   128 VVYTSSNAAVFYNDKDV---DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
             V+ TSS AAV      +   D++DETF+SD    R+  +W   Y++SK L E AA +FA+
Sbjct:   123 VILTSSTAAVLSRQPPIGPNDLVDETFFSDPSLCRETKNW---YSLSKILAENAAWQFAK 179

Query:   185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
             ++G+D+V L P  + GP + P    SV   +  I G
Sbjct:   180 DNGIDMVVLNPGFICGPLLQPTLNMSVELIVDFING 215

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	249
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-104
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	3e-79
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	1e-67
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	5e-66
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	6e-65
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	9e-54
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	9e-53
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	5e-51
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	6e-46
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	6e-42
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	5e-31
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	3e-29
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	4e-29
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	4e-24
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	1e-21
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	1e-21
cd08946	200	cd08946, SDR_e, extended (e) SDRs	2e-18
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	1e-17
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	3e-16
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-15
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	6e-15
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	1e-14
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	3e-14
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	4e-14
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-12
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	2e-12
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	4e-12
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	6e-11
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	2e-10
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	7e-09
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	1e-08
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-08
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	5e-08
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	8e-08
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	9e-08
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-07
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	1e-07
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	1e-07
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	2e-07
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	3e-07
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	3e-07
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	4e-07
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	5e-07
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	6e-07
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	9e-07
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-06
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	2e-06
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	2e-06
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-06
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	3e-06
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	3e-06
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-05
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	2e-05
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	1e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	2e-04
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-04
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	2e-04
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	3e-04
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	4e-04
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	5e-04
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	5e-04
pfam08659	181	pfam08659, KR, KR domain	0.002
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	0.002
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	0.003

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  302 bits (777), Expect = e-104
 Identities = 113/219 (51%), Positives = 153/219 (69%), Gaps = 10/219 (4%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+ RLL  GY+V  TVR   DP   + K ++ L  L GA ERL++F 
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVR---DPG--DEKKVAHLLELEGAKERLKLFK 55

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL     FDAAI GC GV HVA+PVDF+ ++PEE + + A+ GTL +L++C K+ +VKR
Sbjct: 56  ADLLDYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKR 115

Query: 128 VVYTSSNAAVFYND--KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
           VV+TSS AAV +N    +  ++DE+ WSD+D+ +K   W   YA+SKTL E+AA EFAEE
Sbjct: 116 VVFTSSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLW---YALSKTLAEKAAWEFAEE 172

Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL 224
           +GLDLVT+ PS+VVGPF+ P    S +  L+L+ GN ++
Sbjct: 173 NGLDLVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEM 211

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  242 bits (618), Expect = 3e-79
 Identities = 107/221 (48%), Positives = 147/221 (66%), Gaps = 5/221 (2%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M   K  VCVTG +GFI SWL+MRLL+ GY+V  TVR   DP   N K +  L +LPGA+
Sbjct: 1   MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVR---DPA--NVKKVKHLLDLPGAT 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
            RL ++ ADL+    FD AI GCTGV HVATP+DFE K+PE  + +  +NG L I+K+C 
Sbjct: 56  TRLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACA 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           K+ TV+R+V+TSS   V   +    + DE  WSD+D+ R+    G  Y +SKTL E+AA 
Sbjct: 116 KAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAW 175

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           ++A E+GLD +++IP++VVGPFI      S+ ++L+LI GN
Sbjct: 176 KYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN 216

Length = 351

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  211 bits (539), Expect = 1e-67
 Identities = 101/222 (45%), Positives = 135/222 (60%), Gaps = 14/222 (6%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
           EGK  VCVTG +G+IASWL+  LL  GY+V  TVR   DP     K    L  L GA ER
Sbjct: 3   EGK-VVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP-----KKTEHLLALDGAKER 56

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           L +F A+L     FD+ + GC GV H A+P   +  +P+  +   A+ GTL +L+SC K 
Sbjct: 57  LHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV 116

Query: 123 GTVKRVVYTSSNAAVFYNDK----DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA 178
            +VKRVV TSS AAV YN K    DV ++DET++SD  +  +   W   Y +SKTL E A
Sbjct: 117 PSVKRVVVTSSMAAVAYNGKPLTPDV-VVDETWFSDPAFCEESKLW---YVLSKTLAEEA 172

Query: 179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
           A +FA+E+G+D+VT+ P+MV+GP + P    S  + L LI G
Sbjct: 173 AWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLING 214

Length = 322

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  207 bits (529), Expect = 5e-66
 Identities = 101/222 (45%), Positives = 142/222 (63%), Gaps = 12/222 (5%)

Query: 4   GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           GK   CV GGTGF+AS LI  LL  GY+V TTVR   DPE  N K ++ L+ L    + L
Sbjct: 8   GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVR---DPE--NQKKIAHLRALQELGD-L 61

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
           +IF ADL+  + F+A IAGC  V HVATPV+F  ++PE  + + AI G   +LK+C K+ 
Sbjct: 62  KIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK 121

Query: 124 TVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAA 179
           +VKRV+ TSS AAV  N       +M+E  W+DV+++   K  +WG  Y  SKTL E+AA
Sbjct: 122 SVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWG--YPASKTLAEKAA 179

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
            +FAEE+ +DL+T+IP+++ GP +      S+  +++LI GN
Sbjct: 180 WKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGN 221

Length = 338

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  203 bits (518), Expect = 6e-65
 Identities = 89/218 (40%), Positives = 126/218 (57%), Gaps = 12/218 (5%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTG +GF+AS ++ +LL+ GY V  TVR   DP     K ++ L +L     RL +  
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVR---DPS--KVKKVNHLLDLDAKPGRLELAV 55

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD  I GC GV HVATPV F  K+P EVI   AI GTL  LK+   + +VKR
Sbjct: 56  ADLTDEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKP-AIGGTLNALKAAAAAKSVKR 114

Query: 128 VVYTSSNAAVFYNDKDVDMM--DETFWSDVDYIR--KLDSWGKSYAISKTLTERAALEFA 183
            V TSS  +V     +V+ +  DE  W+  ++    K  +W   YA SKTL E+AA +FA
Sbjct: 115 FVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWV--YAASKTLAEKAAWKFA 172

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           +E+ +DL+T+IP++ +G     +   S   +++LI GN
Sbjct: 173 DENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGN 210

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  176 bits (448), Expect = 9e-54
 Identities = 97/234 (41%), Positives = 134/234 (57%), Gaps = 19/234 (8%)

Query: 2   EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
           E   G  CVTG TG+I SWL+  LL  GY+V  T+R   DP     K L  L       +
Sbjct: 7   ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR---DPA----KSLHLLSKWKEG-D 58

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFE----DKEPEEVITQR----AINGTL 113
           RLR+F ADL     FD A+ GC GV HVA  ++F+        EE +  +    AI GTL
Sbjct: 59  RLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTL 118

Query: 114 GILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDM---MDETFWSDVDYIRKLDSWGKSYAI 170
            +LKSCLKS TVKRVV+TSS + +   D +      +DET  + +D++    + G  Y +
Sbjct: 119 NVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVL 178

Query: 171 SKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL 224
           SK LTE AA ++A+E+G+DLV++I + V GPF+ P    S++  L+ I G+ KL
Sbjct: 179 SKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKL 232

Length = 353

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  172 bits (438), Expect = 9e-53
 Identities = 82/238 (34%), Positives = 122/238 (51%), Gaps = 17/238 (7%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            V VTG TGFIAS ++ +LL  GY V  TVRS      +++K  + LK   G ++RL   
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLS----KSAKLKALLKA-AGYNDRLEFV 55

Query: 67  HADL-SHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             D  + P+ +D A+ G   V+HVA+P  F   + E+ +   A+ GTL +L++   +G+V
Sbjct: 56  IVDDLTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSV 115

Query: 126 KRVVYTSSNAAVFY---NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           KRVV TSS AAV      D    +  E  W+D+   +        Y  SKTL E+AA EF
Sbjct: 116 KRVVLTSSVAAVGDPTAEDPGK-VFTEEDWNDLTISKSNGLDA--YIASKTLAEKAAWEF 172

Query: 183 AEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFV 238
            +E+    +L+T+ P  V+GP      A  + SS  LI   +  K+  +       +V
Sbjct: 173 VKENKPKFELITINPGYVLGP---SLLADELNSSNELINKLLDGKLPAIPPNLPFGYV 227

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  168 bits (427), Expect = 5e-51
 Identities = 93/223 (41%), Positives = 129/223 (57%), Gaps = 11/223 (4%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M  G   VCVTG +G+IASW++  LL  GY+V  TVR   D   R  K    L  L GA 
Sbjct: 1   MNGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVR---DLTDR--KKTEHLLALDGAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERL++F ADL     F+ AI GC  V H A+PV F  K+P+  +   A+ GT+ +L +C 
Sbjct: 56  ERLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCK 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDV---DMMDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
           ++ +VKRV+ TSS AAV +    +   D++DETF+SD    R+  +W   Y +SK L E 
Sbjct: 116 ETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNW---YPLSKILAEN 172

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
           AA EFA+++G+D+V L P  + GP + P    SV   +  I G
Sbjct: 173 AAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFING 215

Length = 322

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  155 bits (393), Expect = 6e-46
 Identities = 91/224 (40%), Positives = 132/224 (58%), Gaps = 12/224 (5%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M +G   VCVTG +G+IASW++  LL  GY++  TVR   DP+ R   D   L  L GA 
Sbjct: 1   MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVR---DPKDRKKTD--HLLALDGAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDK-EPEEVITQRAINGTLGILKSC 119
           ERL++F ADL     F+ AI GC  V H A+PV    K +P+  +   A+NGT+ +L++C
Sbjct: 56  ERLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTC 115

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDV---DMMDETFWSDVDYIRKLDSWGKSYAISKTLTE 176
            K  +VKRV+ TSS AAV   +  +   D++DETF+++  +  +   W   Y +SKTL E
Sbjct: 116 TKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW---YVLSKTLAE 172

Query: 177 RAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG 220
            AA  FA+++ +DL+ L P +V GP + P    SV   + L+ G
Sbjct: 173 DAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKG 216

Length = 325

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  145 bits (367), Expect = 6e-42
 Identities = 87/219 (39%), Positives = 129/219 (58%), Gaps = 18/219 (8%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG  G+IASW++  LL+ GY+V  TVR+  DP++      + L+ L G  ERL +  
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKN------THLRELEGGKERLILCK 66

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL   +   AAI GC GV H A+PV     +PE+++ + A+NG   ++ +  ++  VKR
Sbjct: 67  ADLQDYEALKAAIDGCDGVFHTASPV---TDDPEQMV-EPAVNGAKFVINAAAEA-KVKR 121

Query: 128 VVYTSSNAAVFYNDKDVD---MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           VV TSS  AV Y D + D   ++DE+ WSD+D+ +   +W   Y   K + E+AA E A+
Sbjct: 122 VVITSSIGAV-YMDPNRDPEAVVDESCWSDLDFCKNTKNW---YCYGKMVAEQAAWETAK 177

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK 223
           E G+DLV L P +V+GP + P    S+   L  + G+ K
Sbjct: 178 EKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAK 216

Length = 342

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  116 bits (291), Expect = 5e-31
 Identities = 70/250 (28%), Positives = 95/250 (38%), Gaps = 32/250 (12%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R+ VTGG GFI S L+ RLL  G+ V    R   D        + F              
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRL-RDGLDPLLSGVEF-------------V 47

Query: 67  HADLSHPDGFDAAIAGC-TGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSG 123
             DL+  D  D    G    V+H+A      D    +      +N  GTL +L++   +G
Sbjct: 48  VLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG 107

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            VKR V+ SS + V Y D     +DE                  Y +SK   E+    +A
Sbjct: 108 -VKRFVFASSVSVV-YGDPPPLPIDED--------LGPPRPLNPYGVSKLAAEQLLRAYA 157

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTL-FVY--- 239
             +GL +V L P  V GP   P  +  V S+    L   +  I    + S T  FVY   
Sbjct: 158 RLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDD 217

Query: 240 -AIAFAFAFN 248
            A A   A  
Sbjct: 218 VADALLLALE 227

Length = 314

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  111 bits (279), Expect = 3e-29
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 28/212 (13%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
            +E    VCV   +G++  WL+ RLL  GY+V   V+   + E    K++  L       
Sbjct: 2   FDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK--NGETEIEKEIRGLSC---EE 56

Query: 61  ERLRIFHADLSHPDGFD-----AAIAGCTGVLHVATPVDFEDKEPE---EVITQRAINGT 112
           ERL++F  D       D      A+ GC+G+     P        E   +V  + A N  
Sbjct: 57  ERLKVFDVDP-----LDYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHN-- 109

Query: 113 LGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDM---MDETFWSDVDYIRKLDSWGKSYA 169
             +L++C ++ T+++VV+TSS  AV + D ++     +DE  WSD ++ RK   W   +A
Sbjct: 110 --VLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW---HA 164

Query: 170 ISKTLTERAALEFAEEHGLDLVTLIPSMVVGP 201
           ++KTL+E+ A   A + G+++V++   +++GP
Sbjct: 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGP 196

Length = 297

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  111 bits (280), Expect = 4e-29
 Identities = 67/194 (34%), Positives = 87/194 (44%), Gaps = 28/194 (14%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           VTG TGF+ S L+  LL  GY V   VRS          D   L  LP     + +   D
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRS--------GSDAVLLDGLP-----VEVVEGD 49

Query: 70  LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSGTVKR 127
           L+      AA+ GC  V H+A       K+ +E       N  GT  +L + L++G V+R
Sbjct: 50  LTDAASLAAAMKGCDRVFHLAAFTSLWAKDRKE---LYRTNVEGTRNVLDAALEAG-VRR 105

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG 187
           VV+TSS AA+         +DET   +             Y  SK L E   LE A E G
Sbjct: 106 VVHTSSIAALGGPPDGR--IDETTPWNERPFPND------YYRSKLLAELEVLEAAAE-G 156

Query: 188 LDLVTLIPSMVVGP 201
           LD+V + PS V GP
Sbjct: 157 LDVVIVNPSAVFGP 170

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 98.1 bits (245), Expect = 4e-24
 Identities = 75/199 (37%), Positives = 97/199 (48%), Gaps = 26/199 (13%)

Query: 6   GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
            +V VTG TGF+ S ++  LL+ G  V   VR   D   RN      L+ L        I
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR--RN------LEGLDV-----EI 47

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSG 123
              DL  P     A+AGC  + HVA        +PEE+    A N  GT  +L++ L++G
Sbjct: 48  VEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEM---YAANVEGTRNLLRAALEAG 104

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            V+RVVYTSS A +     D    DET  S +D     D  G  Y  SK L E+AALE A
Sbjct: 105 -VERVVYTSSVATLGVR-GDGTPADETTPSSLD-----DMIG-HYKRSKFLAEQAALEMA 156

Query: 184 EEHGLDLVTLIPSMVVGPF 202
            E GL +V + PS  +GP 
Sbjct: 157 AEKGLPVVIVNPSTPIGPR 175

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score = 91.8 bits (228), Expect = 1e-21
 Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 46/217 (21%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTGG  F+   ++ RLL HGYSV   V ++        +D   L+ +    E  R   
Sbjct: 56  VCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQ--------EDKEKLREMEMFGEMGRSND 107

Query: 68  ------ADLSHPDGFDAAIAGCTGVLHVATPVD-------------FEDKEPEEVITQRA 108
                 A+L+ P+    A  GC GV H +  VD              E K  E VI    
Sbjct: 108 GIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVI---- 163

Query: 109 INGTLGILKSCLKSGTVKRVVYTSSNAAVFYND---KDVD-MMDETFWSDVDYIRKLDSW 164
                   ++C+++ +V++ V+TSS  A  +      D+  ++DE  WSD  + R    W
Sbjct: 164 --------EACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLW 215

Query: 165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP 201
              YA+ K   E+AA   A   GL L T+ P++V GP
Sbjct: 216 ---YALGKLKAEKAAWRAARGKGLKLATICPALVTGP 249

Length = 367

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 89.3 bits (222), Expect = 1e-21
 Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 31/208 (14%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTGGTGFI S L+ RLL  GY V    R       R S+           + R+R   
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRR------RRSE--------SLNTGRIRFHE 46

Query: 68  ADLSHPDGFDAAIAGC--TGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
            DL+ PD  +  +A      V+H+A  + V    ++P + I +  + GTL +L++  ++G
Sbjct: 47  GDLTDPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFI-RANVLGTLRLLEAARRAG 105

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            VKR V+ SS + V Y D     + E        +  L      YA +K   ER    +A
Sbjct: 106 -VKRFVFASS-SEV-YGDVADPPITED-----TPLGPLSP----YAAAKLAAERLVEAYA 153

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSV 211
             +GL  V L    V GP     F   V
Sbjct: 154 RAYGLRAVILRLFNVYGPGNPDPFVTHV 181

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 80.4 bits (199), Expect = 2e-18
 Identities = 50/194 (25%), Positives = 74/194 (38%), Gaps = 56/194 (28%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTGG GFI S L+ RLL+ G+ V    R ++                        + H
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLDV------------------------VVH 36

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
                     AA+ G          V      P+E   +  + GTL +L++  K+G VKR
Sbjct: 37  L---------AALVG----------VPASWDNPDEDF-ETNVVGTLNLLEAARKAG-VKR 75

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG 187
            VY SS +   Y   +    +E          +  S    Y +SK   E     + E +G
Sbjct: 76  FVYASSASV--YGSPEGLPEEEE------TPPRPLS---PYGVSKLAAEHLLRSYGESYG 124

Query: 188 LDLVTLIPSMVVGP 201
           L +V L  + V GP
Sbjct: 125 LPVVILRLANVYGP 138

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 80.0 bits (198), Expect = 1e-17
 Identities = 62/199 (31%), Positives = 83/199 (41%), Gaps = 29/199 (14%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           RV VTGG GFI S L+ RLL+ G+ V   V   L    +         NLP     ++  
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEV--IVLDNLSTGKKE--------NLPEVKPNVKFI 50

Query: 67  HADLSHPDGFDAAIAGCTGVLHVAT----PVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             D+   +  + A  G   V H A     P   ED   +  +    + GTL +L++  K+
Sbjct: 51  EGDIRDDELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVN---VLGTLNLLEAARKA 107

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G VKR VY SS++   Y D      DE           L      YA+SK   E     F
Sbjct: 108 G-VKRFVYASSSSV--YGDPPYLPKDED-----HPPNPL----SPYAVSKYAGELYCQVF 155

Query: 183 AEEHGLDLVTLIPSMVVGP 201
           A  +GL  V+L    V GP
Sbjct: 156 ARLYGLPTVSLRYFNVYGP 174

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 75.8 bits (187), Expect = 3e-16
 Identities = 52/198 (26%), Positives = 74/198 (37%), Gaps = 33/198 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V VTG  GFI   L+ +LL  G  V   VR+                N   +       
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAE--------------NAEPSVVL---- 42

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPV-DFEDKEPEEVITQRAIN--GTLGILKSCLKSG 123
            A+L   D F     G   V+H+A  V    D+  + +   R +N   T  + ++  + G
Sbjct: 43  -AELPDIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG 101

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            VKR V+ SS              +    +  D           Y  SK   ERA LE  
Sbjct: 102 -VKRFVFLSSVKVNGEGTVGAPFDETDPPAPQDA----------YGRSKLEAERALLELG 150

Query: 184 EEHGLDLVTLIPSMVVGP 201
              G+++V L P MV GP
Sbjct: 151 ASDGMEVVILRPPMVYGP 168

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 73.9 bits (182), Expect = 2e-15
 Identities = 60/243 (24%), Positives = 94/243 (38%), Gaps = 26/243 (10%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           VTGG GF+   ++  LL  G      VR   D          F K      + +     D
Sbjct: 2   VTGGGGFLGRHIVRLLLREGE--LQEVRV-FDLRFSPELLEDFSK-----LQVITYIEGD 53

Query: 70  LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV 129
           ++       A+ G   V+H A  +D   K   + I +  + GT  +L +C+K+G V+ +V
Sbjct: 54  VTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG-VRVLV 112

Query: 130 YTSSNAAVFYNDKDVDMM--DETFWSDVDYIRKLDSWGKSYAISKTLTERAALE---FAE 184
           YTSS   V  N     ++  DET            +    Y  SK L E+  L+      
Sbjct: 113 YTSSMEVVGPNSYGQPIVNGDET-------TPYESTHQDPYPESKALAEKLVLKANGSTL 165

Query: 185 EHGLDLVT--LIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA 242
           ++G  L T  L P+ + G    P     +   L    G  K +       S  ++V  +A
Sbjct: 166 KNGGRLYTCALRPAGIFGEG-DPFLFPFLVRLLK--NGLAKFRTGDKNVLSDRVYVGNVA 222

Query: 243 FAF 245
           +A 
Sbjct: 223 WAH 225

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 72.4 bits (178), Expect = 6e-15
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 25/198 (12%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           VTGGTGF+   L+ RLL++G+ V   VRSE        +    ++     ++R+R+   D
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSE-----SLGEAHERIEEAGLEADRVRVLEGD 57

Query: 70  LSHPD-GFDAA-----IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
           L+ P+ G  AA           V+H A   DF+   P E   +  I+GT  +L+   +  
Sbjct: 58  LTQPNLGLSAAASRELAGKVDHVIHCAASYDFQ--APNEDAWRTNIDGTEHVLELAARLD 115

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
             +R  Y S+ A V       +       ++++  +   +    Y  SK   E+     A
Sbjct: 116 I-QRFHYVST-AYV-----AGNREGNIRETELNPGQNFKNP---YEQSKAEAEQLVRAAA 165

Query: 184 EEHGLDLVTLIPSMVVGP 201
            +  + L    PS+VVG 
Sbjct: 166 TQ--IPLTVYRPSIVVGD 181

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 21/198 (10%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS-ERLRI 65
            V VTG  GFI S L  RLL  G+ V       LD    NS +   L  L  A  +R   
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRA-----LD--IYNSFNSWGL--LDNAVHDRFHF 51

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
              D+      +  +  C  V H+A    + +    P   + +  + GTL +L++     
Sbjct: 52  ISGDVRDASEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYV-ETNVFGTLNVLEAACVLY 110

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
             KRVV+TS++    Y       +DE     + YI K  S    Y+ SK   +R A  + 
Sbjct: 111 -RKRVVHTSTSEV--YGTAQDVPIDED--HPLLYINKPRS---PYSASKQGADRLAYSYG 162

Query: 184 EEHGLDLVTLIPSMVVGP 201
              GL +  + P    GP
Sbjct: 163 RSFGLPVTIIRPFNTYGP 180

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 70.5 bits (173), Expect = 3e-14
 Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 28/199 (14%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
              V GG+GF+   L+ +LL  G     TV    D            +  P +S R++  
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRG---NPTVHV-FDIRPT-------FELDPSSSGRVQFH 49

Query: 67  HADLSHPDGFDAAI--AGCTGVLHVATPVDFEDKEP-EEVITQRAINGTLGILKSCLKSG 123
             DL+ P   + A    G   V H A+P    + +   +V  Q    GT  ++++C K G
Sbjct: 50  TGDLTDPQDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVNVQ----GTRNVIEACRKCG 105

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF- 182
            VK++VYTSS A+V +N +D+   DE+      Y  K      +Y  +K L E+  L+  
Sbjct: 106 -VKKLVYTSS-ASVVFNGQDIINGDESL----PYPDKHQD---AYNETKALAEKLVLKAN 156

Query: 183 AEEHGLDLVTLIPSMVVGP 201
             E GL    L P+ + GP
Sbjct: 157 DPESGLLTCALRPAGIFGP 175

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 70.2 bits (172), Expect = 4e-14
 Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 24/240 (10%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            V VTGG+GF    L+ +LL+ G    T VRS  D         +           +   
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERG---GTYVRS-FD---IAPPGEALSAWQH---PNIEFL 50

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D++  +  + A++G   V H A  V      P ++  +  + GT  +L +C + G V+
Sbjct: 51  KGDITDRNDVEQALSGADCVFHTAAIVPLA--GPRDLYWEVNVGGTQNVLDACQRCG-VQ 107

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           + VYTSS+ +V +  +++   DET       +         YA +K + E   LE     
Sbjct: 108 KFVYTSSS-SVIFGGQNIHNGDET-------LPYPPLDSDMYAETKAIAEIIVLEANGRD 159

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFA 246
            L    L P+ + GP         +        G VK       N     +V+ +A A  
Sbjct: 160 DLLTCALRPAGIFGPG-DQGLVPILFE--WAEKGLVKFVFGRGNNLVDFTYVHNLAHAHI 216

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 40/196 (20%), Positives = 61/196 (31%), Gaps = 37/196 (18%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + GGT FI   L+  LL  G+ VT          +R               E +   
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVF--------NRGRTKPDL-------PEGVEHI 46

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D +  D  +  + G      V   VD     P +V         L   K     G VK
Sbjct: 47  VGDRNDRDALEELLGG--EDFDVV--VDTIAYTPRQVER------ALDAFK-----GRVK 91

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           + ++ SS +   Y      + + T   + D +   D W   Y   K   E       E  
Sbjct: 92  QYIFISSASV--YLKPGRVITESTPLREPDAVGLSDPW--DYGRGKRAAEDVL---IEAA 144

Query: 187 GLDLVTLIPSMVVGPF 202
                 + P  + GP 
Sbjct: 145 AFPYTIVRPPYIYGPG 160

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 22/178 (12%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE------RL 63
           VTGG GF+   +I  LL+         R E   E R   D +F   L    E       +
Sbjct: 4   VTGGGGFLGQHIIRLLLE---------RKEELKEIR-VLDKAFGPELIEHFEKSQGKTYV 53

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
                D+        A  G + V+H A  VD       E + +  +NGT  +L++C+++ 
Sbjct: 54  TDIEGDIKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQNN 113

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
            VKR+VYTSS      N K         ++ V+     D+    YA SK L E   L 
Sbjct: 114 -VKRLVYTSSIEVAGPNFK-----GRPIFNGVEDTPYEDTSTPPYASSKLLAENIVLN 165

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 23/205 (11%)

Query: 10  VTGGTGFIASWLIMRLLD--HGYSVTTTVR--SELDPEHRNSKDL--SFLKNLPGASERL 63
           +TG TGF+   L+ +LL       +   VR         R  ++L    L +   A ER+
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 64  RIFHADLSHPD-GFDAA----IAGCTG-VLHVATPVDFEDKEPEEVITQRAIN--GTLGI 115
                DLS P+ G        +A     ++H A  V+F   EP   +  RA N  GT  +
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFV--EPYSDL--RATNVLGTREV 116

Query: 116 LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLT 175
           L+   K        + S+  A    ++   + ++ +  D D    L      Y  SK L 
Sbjct: 117 LRLA-KQMKKLPFHHVST--AYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLA 173

Query: 176 ERAALEFAEEHGLDLVTLIPSMVVG 200
           E+   E A   GL +V   PS++ G
Sbjct: 174 EQLVREAAG--GLPVVIYRPSIITG 196

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 59.9 bits (146), Expect = 6e-11
 Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 18/127 (14%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V V G TG +   ++  LLD GY V   VR   DP                 +    + 
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVR---DPSQAEKL----------EAAGAEVV 47

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             DL+  +   AA+ G   V+  A          E V     IN    ++ +  K+G VK
Sbjct: 48  VGDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNIN----LIDAAKKAG-VK 102

Query: 127 RVVYTSS 133
           R V  SS
Sbjct: 103 RFVLVSS 109

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 13/130 (10%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGA-SERLRI 65
           V VTG  GFI S L+  L+  GY V   V         NS +   +L   P    +++ +
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLY-------NSFNSWGWLDTSPPEVKDKIEV 53

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVAT--PVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
              D+  PD    A+ GC  V H+A    + +    P+  +    + GTL +L++    G
Sbjct: 54  VTGDIRDPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYV-DTNVTGTLNVLQAARDLG 112

Query: 124 TVKRVVYTSS 133
            V++VV+TS+
Sbjct: 113 -VEKVVHTST 121

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 51/195 (26%), Positives = 74/195 (37%), Gaps = 31/195 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V VTG TGFI S ++  L+  G+ V    RS+       +  L       GA     + 
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVVGLARSD-----AGAAKLE----AAGAQ----VH 48

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             DL   D    A A    V+H+A   DF++      + +RAI      L+     GT K
Sbjct: 49  RGDLEDLDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALR-----GTGK 103

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
            ++YTS               DE      D              ++ ++E AALE AE  
Sbjct: 104 PLIYTSGIW--LLGPTGGQEEDE---EAPD--------DPPTPAARAVSEAAALELAERG 150

Query: 187 GLDLVTLIPSMVVGP 201
               V  +P +V G 
Sbjct: 151 VRASVVRLPPVVHGR 165

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 30/198 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           RV + GG GFI S L+  LL+ G  V    RS    E      L  +  + G  E     
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYE----LPLGGVDYIKGDYENR--- 53

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA---TPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
            ADL       +A+ G   V+H+A    P         ++  Q  +  T+ +L++C  +G
Sbjct: 54  -ADLE------SALVGIDTVIHLASTTNPATSNKNPILDI--QTNVAPTVQLLEACAAAG 104

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            + ++++ SS   V Y   +   + E+     D    +     SY ISK   E+    + 
Sbjct: 105 -IGKIIFASSGGTV-YGVPEQLPISES-----DPTLPI----SSYGISKLAIEKYLRLYQ 153

Query: 184 EEHGLDLVTLIPSMVVGP 201
             +GLD   L  S   GP
Sbjct: 154 YLYGLDYTVLRISNPYGP 171

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 27/146 (18%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT------TTVRSELDPEHRNSKDLSFLKNLPGAS 60
           R+ VTGG GFI S L+ RLL+ G  V       +  R  ++PE  N K   F+K      
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFEN-KAFRFVK------ 53

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVD--FEDKEPEEVITQRAINGTLGILKS 118
             L    AD       D        V H+A   D      +P+  + +  +  T  +L++
Sbjct: 54  RDLLDT-ADKVAKKDGDT-------VFHLAANPDVRLGATDPDIDLEENVL-ATYNVLEA 104

Query: 119 CLKSGTVKRVVYTSSNAAVFYNDKDV 144
              +G VKR+V+ SS + V Y +  V
Sbjct: 105 MRANG-VKRIVFASS-STV-YGEAKV 127

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 46/199 (23%), Positives = 71/199 (35%), Gaps = 32/199 (16%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTG  G +   L  RL      +         P              PG+  ++    
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRP--------------PGSPPKVEYVR 46

Query: 68  ADLSHPDGFDA-AIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSGT 124
            D+  P   D         V+H+A  +D      E    +  IN  GT  +L +C  +G 
Sbjct: 47  LDIRDPAAADVFREREADAVVHLAFILDPPRDGAE----RHRINVDGTQNVLDACAAAG- 101

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAALEFA 183
           V RVV TSS A    +  +   + E           L    +  Y+  K   E+   EF 
Sbjct: 102 VPRVVVTSSVAVYGAHPDNPAPLTED--------APLRGSPEFAYSRDKAEVEQLLAEFR 153

Query: 184 EEH-GLDLVTLIPSMVVGP 201
             H  L++  L P+ ++GP
Sbjct: 154 RRHPELNVTVLRPATILGP 172

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 51.1 bits (123), Expect = 8e-08
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 21/124 (16%)

Query: 10  VTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA 68
           V G TG     ++  LL   G+ V    R   DP    +K L        A+  + +   
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTR---DPSSPAAKAL--------AAPGVEVVQG 51

Query: 69  DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRV 128
           DL  P+  +AA+ G  GV  V     +E    +E+   +  N    ++ +  ++G V+  
Sbjct: 52  DLDDPESLEAALKGVYGVFLVTDF--WEAGGEDEI--AQGKN----VVDAAKRAG-VQHF 102

Query: 129 VYTS 132
           V++S
Sbjct: 103 VFSS 106

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 51.5 bits (124), Expect = 9e-08
 Identities = 60/268 (22%), Positives = 95/268 (35%), Gaps = 48/268 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTT---VR--SELDPEHR-----NSKDLSFLKNL 56
            V +TG TGF+   L+ +LL     +      +R  S    E R       K     +NL
Sbjct: 2   SVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNL 61

Query: 57  -PGASERLRIFHADLSHPD-GFDAAIAGC-----TGVLHVATPVDFEDKEPEEVITQRAI 109
            P    ++     DLS P+ G               ++H A  V F+++  E +    +I
Sbjct: 62  NPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDEAL----SI 117

Query: 110 N--GTLGILKSCLKSGTVKRVVYTS---SNAAVFYNDKDVDMMDETFWSDVDYIRKLD-- 162
           N  GTL +L+   +   +K  V+ S    N      ++ V          +D +  +D  
Sbjct: 118 NVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDILELMDDL 177

Query: 163 -----------SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVG----PFICPKF 207
                          +Y  +K L ER  L+      L LV + PS+V      PF  P +
Sbjct: 178 ELERATPKLLGGHPNTYTFTKALAERLVLKERG--NLPLVIVRPSIVGATLKEPF--PGW 233

Query: 208 AGSVRSSLALILGNVKLKICCVMNRSHT 235
             +      L L   K  +   MN    
Sbjct: 234 IDNFNGPDGLFLAYGKGILRT-MNADPN 260

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 25/133 (18%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            V V G TGFI  +++ RL   G  V    R E       ++ L  + +L      +   
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCE-----AYARRLLVMGDLGQ----VLFV 52

Query: 67  HADLSHPDGFDAAIAG------CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
             DL   +    A+ G        G L+      FED           + G   + K+  
Sbjct: 53  EFDLRDDESIRKALEGSDVVINLVGRLYETKNFSFEDVH---------VEGPERLAKAAK 103

Query: 121 KSGTVKRVVYTSS 133
           ++G V+R+++ S+
Sbjct: 104 EAG-VERLIHISA 115

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 54/226 (23%), Positives = 83/226 (36%), Gaps = 58/226 (25%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF---LKNLP--GASE 61
           ++ VTGG GFI S  +  LL+            LD        L++   L+NL    +S 
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKIIN---LD-------KLTYAGNLENLEDVSSSP 51

Query: 62  RLRIFHADLSHPDGFDAAIA--GCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILK 117
           R R    D+   +  D          V+H A  + VD    +PE  I +  + GT  +L+
Sbjct: 52  RYRFVKGDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFI-RTNVLGTYTLLE 110

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS---------- 167
           +  K G VKR V+ S+              DE +         L   G+           
Sbjct: 111 AARKYG-VKRFVHIST--------------DEVYGD-------LLDDGEFTETSPLAPTS 148

Query: 168 -YAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF-----ICPKF 207
            Y+ SK   +     +   +GL +V    S   GP+     + P F
Sbjct: 149 PYSASKAAADLLVRAYHRTYGLPVVITRCSNNYGPYQFPEKLIPLF 194

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 13/133 (9%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT---TTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           RV +TGG GFI S L    L  G+ V      +R        N   L   +   G    +
Sbjct: 2   RVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSF---GNLAWLKANREDGG----V 54

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
           R  H D+ + +  +        ++H A    V      P       A  GTL +L++  +
Sbjct: 55  RFVHGDIRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNA-LGTLNVLEAARQ 113

Query: 122 SGTVKRVVYTSSN 134
                  ++TS+N
Sbjct: 114 HAPNAPFIFTSTN 126

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 38/200 (19%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ +TGGTGFI   L  RL   G+ V    R                           I 
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRP----------------GKAEGLAEVIT 44

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA-TPVD---FEDKEPEEVITQRAINGTLGILKSCLKS 122
              LS        + G   V+++A  P+    + +   +E+++ R I  T  +L   + +
Sbjct: 45  WDGLS---LGPWELPGADAVINLAGEPIACRRWTEANKKEILSSR-IEST-RVLVEAIAN 99

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL-DSWGKSYAISKTLTERAALE 181
                 V  S++A  +Y     +++ E   S  D++ ++  +W           E+AA  
Sbjct: 100 APAPPKVLISASAVGYYGHSGDEVLTENSPSGKDFLAEVCKAW-----------EKAAQP 148

Query: 182 FAEEHGLDLVTLIPSMVVGP 201
            A E G  +V L   +V+GP
Sbjct: 149 -ASELGTRVVILRTGVVLGP 167

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 47/212 (22%), Positives = 78/212 (36%), Gaps = 30/212 (14%)

Query: 7   RVCVTGGTGFIASWLIMRLLD--HGYSVTTTVRSELDPEHRNSKDLSFLKNLPG------ 58
            V +TG TGF+ ++L++ LLD      V   VR++   E   ++     K          
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDA-KVICLVRAQ-SDEAALAR---LEKTFDLYRHWDE 56

Query: 59  -ASERLRIFHADLSHPD-GFDAA----IAGCTG-VLHVATPVDFEDKEPEEVITQRAIN- 110
            +++R+ +   DL+ PD G        +A     ++H A  V+     P      R  N 
Sbjct: 57  LSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNH--VFPYS--ELRGANV 112

Query: 111 -GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYA 169
            GT  +L+    +G  K + Y SS +      +        F                Y 
Sbjct: 113 LGTAEVLRLAA-TGKPKPLHYVSSISV--GETEYYSNFTVDFDEISPTRNVGQGLAGGYG 169

Query: 170 ISKTLTERAALEFAEEHGLDLVTLIPSMVVGP 201
            SK + E+   E A + GL +    P  + G 
Sbjct: 170 RSKWVAEKLVRE-AGDRGLPVTIFRPGYITGD 200

Length = 382

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 45/191 (23%), Positives = 74/191 (38%), Gaps = 32/191 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R  VTG  GFI S L  RL   G+ V         PEH               ++     
Sbjct: 2   RALVTGAGGFIGSHLAERLKAEGHYV--RGADWKSPEHMTQ-----------PTDDDEFH 48

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPV---DFEDKEPEEVI-TQRAINGTLGILKSCLKS 122
             DL   +    A  G   V H+A  +    +       ++     IN    +L++   +
Sbjct: 49  LVDLREMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLIN--FNMLEAARIN 106

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW----GKSYAISKTLTERA 178
           G V+R ++ SS A V+   K ++       + V  +R+ D+W      +Y   K  TER 
Sbjct: 107 G-VERFLFASS-ACVYPEFKQLE-------TTVVRLREEDAWPAEPQDAYGWEKLATERL 157

Query: 179 ALEFAEEHGLD 189
              + E++G++
Sbjct: 158 CQHYNEDYGIE 168

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 36/191 (18%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-LSFLKNLPGASERLRI 65
           R+ +TGG GF+ S L  RLL+ G+ V       +D      K  +  L   P        
Sbjct: 2   RILITGGAGFLGSHLCDRLLEDGHEVIC-----VDNFFTGRKRNIEHLIGHP----NFEF 52

Query: 66  FHADLSHP--DGFDAAIAGCTGVLHVA---TPVDFEDKEPEEVITQRAINGTLGILKSCL 120
              D++ P     D        + H+A   +PV ++   P + +    + GTL +L    
Sbjct: 53  IRHDVTEPLYLEVDQ-------IYHLACPASPVHYQ-YNPIKTLKTNVL-GTLNMLGLAK 103

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERA 178
           + G   RV+  S++    Y D +V    E++W +V+ I  R        Y   K + E  
Sbjct: 104 RVGA--RVLLASTSEV--YGDPEVHPQPESYWGNVNPIGPR------SCYDEGKRVAETL 153

Query: 179 ALEFAEEHGLD 189
            + +  +HG+D
Sbjct: 154 CMAYHRQHGVD 164

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 26/130 (20%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTG TG++   L+ RLL  G+ V   VRS      +       L + P  SER+ +  
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRS----PEK-------LADRP-WSERVTVVR 48

Query: 68  ADLSHPDGFDAAIAGCTGV---LHVATP-VDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
            DL  P+   AA+ G       +H      DFE+ +      + A N      ++   +G
Sbjct: 49  GDLEDPESLRAALEGIDTAYYLVHSMGSGGDFEEAD-----RRAARN----FARAARAAG 99

Query: 124 TVKRVVYTSS 133
            VKR++Y   
Sbjct: 100 -VKRIIYLGG 108

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 48.9 bits (117), Expect = 6e-07
 Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 34/249 (13%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V +TG +GF+   L  RLL           S++  E     D+   K  P  + R+   
Sbjct: 2   KVLITGASGFVGQRLAERLL-----------SDVPNERLILIDVVSPKA-PSGAPRVTQI 49

Query: 67  HADLSHPDGFDAAIAG-CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             DL+ P   +A   G    V H+A  V    +   ++  +  ++GT  +L++  K+G  
Sbjct: 50  AGDLAVPALIEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPK 109

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDET----FWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
            R V+TSS  AV+       + D T                    SY   K + E    +
Sbjct: 110 PRFVFTSS-LAVYGLPLPNPVTDHTALDPAS--------------SYGAQKAMCELLLND 154

Query: 182 FAEEHGLDLVTLI-PSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA 240
           ++    +D  TL  P++ V P   P  A S  +S  +    V  +    +      ++ +
Sbjct: 155 YSRRGFVDGRTLRLPTVCVRPGR-PNKAASAFASTIIREPLVGEEAGLPVAEQLRYWLKS 213

Query: 241 IAFAFAFNV 249
           +A A A  V
Sbjct: 214 VATAVANFV 222

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 51/208 (24%), Positives = 79/208 (37%), Gaps = 28/208 (13%)

Query: 8   VCVTGGTGFIASWLIMRLLD--HGYSVTTTVRSELDPEH-----RNSKDLSFLKNLPGAS 60
           V +TG TGF+ ++L+  LL       V   VR+    EH     R +     L +   A 
Sbjct: 2   VLLTGATGFLGAYLLEELLRRSTQAKVICLVRAA-SEEHAMERLREALRSYRLWHEDLAR 60

Query: 61  ERLRIFHADLSHPD-GFDAA-----IAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GT 112
           ER+ +   DLS P  G   A           ++H    V++      E+   R  N  GT
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWV-YPYSEL---RGANVLGT 116

Query: 113 LGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISK 172
             +L+    SG  K + Y S+ +     D      D+        +         YA SK
Sbjct: 117 REVLRLAA-SGRAKPLHYVSTISVGAAIDLSTVTEDDAT------VTPPPGLAGGYAQSK 169

Query: 173 TLTERAALEFAEEHGLDLVTLIPSMVVG 200
            + E    E A + GL +  + P  ++G
Sbjct: 170 WVAELLVRE-ASDRGLPVTIVRPGRILG 196

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 48.3 bits (116), Expect = 1e-06
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 33/157 (21%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V VTGG G+I S  ++ LL+ GY V       LD      ++   L        R+  +
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVV-----LDNLSNGHRE--ALP--RIEKIRIEFY 51

Query: 67  HADLSHPDGFDAAIA--GCTGVLH----------VATPVDFEDKEPEEVITQRAINGTLG 114
             D+      D   A      V+H          V  P+ + D           + GTL 
Sbjct: 52  EGDIRDRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNN---------VVGTLN 102

Query: 115 ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF 151
           +L++    G VK  V+ SS+AAV Y + +   + E  
Sbjct: 103 LLEAMRAHG-VKNFVF-SSSAAV-YGEPETVPITEEA 136

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 19/126 (15%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + + G TGFI   L   LL+ G+ VT  V        RN+K LS     P A        
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLV--------RNTKRLSKEDQEPVAVV-----E 47

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            DL   D    A+ G   V+H+A     + ++  EV     + GT  +L++  K   VK 
Sbjct: 48  GDLRDLDSLSDAVQGVDVVIHLAGA-PRDTRDFCEVD----VEGTRNVLEAA-KEAGVKH 101

Query: 128 VVYTSS 133
            ++ SS
Sbjct: 102 FIFISS 107

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 36/199 (18%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
           ++ VTG  G + S ++  L   GY  V      ELD   + +    F K  P       +
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVVFRTSKELDLTDQEAVRAFFEKEKPDY-----V 55

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVAT-PVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
            H          AA  G  G++   T P DF        +    +     ++ +  + G 
Sbjct: 56  IHL---------AAKVG--GIVANMTYPADF--------LRDNLLIND-NVIHAAHRFG- 94

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR-KLDSWGKSYAISKTLTERAALEFA 183
           VK++V+  S+    Y D     +DE+     D +    +   + YAI+K    +    + 
Sbjct: 95  VKKLVFLGSSCI--YPDLAPQPIDES-----DLLTGPPEPTNEGYAIAKRAGLKLCEAYR 147

Query: 184 EEHGLDLVTLIPSMVVGPF 202
           +++G D ++++P+ + GP 
Sbjct: 148 KQYGCDYISVMPTNLYGPH 166

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 38/233 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R  +TG TG   S+L   LL+ GY V   VR        +S +   + +L    +R+ + 
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVR------RSSSFNTDRIDHLYINKDRITLH 54

Query: 67  HADLSHPDGFDAAIAGC--TGVLHVA----TPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           + DL+       AI       + H+A      V F+D  PE    +    GTL +L+  +
Sbjct: 55  YGDLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDD--PEYTA-EVNAVGTLNLLE-AI 110

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAA 179
           +   +    Y +S++  +        + E   S+    R      +S YA+SK   +   
Sbjct: 111 RILGLDARFYQASSSEEY------GKVQELPQSETTPFR-----PRSPYAVSKLYADWIT 159

Query: 180 LEFAEEHGLDLVTLIPSMVVGP-----FICPKFAGSV-RSSLALI----LGNV 222
             + E +GL  V        GP     F+  K    V R    L     LGN+
Sbjct: 160 RNYREAYGLFAVNGRLFNHEGPRRGETFVTRKITRQVARIKAGLQPVLKLGNL 212

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 25/123 (20%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           VTG TG + + ++  LL    SV   VR+        +K  +      G      +   D
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNP-----EKAKAFAA----DGV----EVRQGD 49

Query: 70  LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV 129
              P+  + A  G   +L + +P D ED+  +    +  I+       +  ++G VK +V
Sbjct: 50  YDDPETLERAFEGVDRLLLI-SPSDLEDRIQQH---KNFID-------AAKQAG-VKHIV 97

Query: 130 YTS 132
           Y S
Sbjct: 98  YLS 100

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 35/194 (18%), Positives = 53/194 (27%), Gaps = 48/194 (24%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           V G TG     L+  LL  G+ VT   R+                     +  +     D
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNP----------------SKAPAPGVTPVQKD 46

Query: 70  LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV 129
           L        A+AG   V+        +              G   +L +  ++G V+R+V
Sbjct: 47  LFDLADLAEALAGVDAVVDAFGARPDDSD------------GVKHLLDAAARAG-VRRIV 93

Query: 130 YTSSNAA-VFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGL 188
             S+                  F                YA +K     AA E     GL
Sbjct: 94  VVSAAGLYRDEPGTFRLDDAPLF--------------PPYARAK----AAAEELLRASGL 135

Query: 189 DLVTLIPSMVVGPF 202
           D   + P  +    
Sbjct: 136 DWTIVRPGALFDEE 149

Length = 182

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 37/213 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTT--VRSELDPEHRNSKDLSFLKNLPGA----- 59
            V +TG TGF+ ++L+  LL           VR++ D E    + +  LK          
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAK-DEEAALERLIDNLKEYGLNLWDEL 59

Query: 60  -SERLRIFHADLSHPD-GFDAAIAG-----CTGVLHVATPVDF----EDKEPEEVITQRA 108
              R+++   DLS P+ G               ++H    V++    E+ +P  V+    
Sbjct: 60  ELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELKPANVL---- 115

Query: 109 INGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSY 168
             GT  +LK    +G +K + + S+  +VF  ++   + DE      D +   +     Y
Sbjct: 116 --GTKELLKLAA-TGKLKPLHFVST-LSVFSAEEYNALDDE---ESDDMLESQNGLPNGY 168

Query: 169 AISKTLTERAALEFAEEHGLDLVTLIPSMVVGP 201
             SK + E+   E A          +P  ++ P
Sbjct: 169 IQSKWVAEKLLREAANRG-------LPVAIIRP 194

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 14/94 (14%)

Query: 6  GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
           ++ VTG TGF+   ++  LL  G+ V   VR+                   G    L  
Sbjct: 1  MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----------GGVEVVL-- 48

Query: 66 FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKE 99
             DL  P    A   G  GVL ++  +D  D  
Sbjct: 49 --GDLRDPKSLVAGAKGVDGVLLISGLLDGSDAF 80

Length = 275

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 11/95 (11%)

Query: 1  MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF--LKNLPG 58
          M      + VTGG G+I S  +++LL  GY V   V   LD    NS + +   +K L G
Sbjct: 1  MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKV--VVIDNLD----NSSEEALRRVKELAG 54

Query: 59 A-SERLRIFHADLSHPDGFDAAIAGCT--GVLHVA 90
             + L     DL   +  +   A      V+H A
Sbjct: 55 DLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFA 89

Length = 352

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 26/150 (17%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLD-----HGYSVTTTVRSELDPEHRNSKDLSFLKNLP 57
           +GK RV VTG TGF  SWL + L +      GYS+         P      +L       
Sbjct: 3   QGK-RVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTN----PNLFELANLD------ 51

Query: 58  GASERLRIFHADLSHPDGFDAAIAGCTG--VLHVA--TPVDFEDKEPEEVITQRAINGTL 113
               ++     D+   +    AI       V H+A    V    K+P E   +  + GT+
Sbjct: 52  ---NKISSTRGDIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETF-ETNVMGTV 107

Query: 114 GILKSCLKSGTVKRVVYTSSNAAVFYNDKD 143
            +L++  ++G+VK VV  +S+    Y +K+
Sbjct: 108 NLLEAIRETGSVKAVVNVTSDKC--YENKE 135

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 14/77 (18%)

Query: 8  VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
          + +TGGTGFI   L  RL   G+ VT   RS   P   N+K         G         
Sbjct: 1  ILITGGTGFIGRALTQRLTKRGHEVTILTRSP--PPGANTKW-------EGYKPWAGEDA 51

Query: 68 ADLSHPDGFDAAI--AG 82
            L   +G DA I  AG
Sbjct: 52 DSL---EGADAVINLAG 65

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 18/146 (12%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V +TGG+  I   L   L+  G +V    RSE   E    +++    N  G   ++    
Sbjct: 4   VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEA-VEEIEAEANASGQ--KVSYIS 60

Query: 68  ADLSHPDGFDAAIAGCTG-------VLHVA---TPVDFEDKEPEEVITQRAIN--GTLGI 115
           ADLS  +  + A A           V++ A    P  FED   EE      +N  G+L +
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120

Query: 116 LKSCL---KSGTVKRVVYTSSNAAVF 138
             + L   K      +V+ SS AA+ 
Sbjct: 121 AHAVLPLMKEQRPGHIVFVSSQAALV 146

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 36/157 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V VTGG G+I S  + +LL  G+ V       LD      K    L  L       + +
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVV-----LDNLSNGHKI--ALLKLQF-----KFY 49

Query: 67  HADLSHPDGFDAAIA--GCTGVLH----------VATPVDFEDKEPEEVITQRAINGTLG 114
             DL       A         V+H          V  P+ + D           + GTL 
Sbjct: 50  EGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNN---------VVGTLN 100

Query: 115 ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF 151
           ++++ L++G VK+ ++ SS AAV Y +     + ET 
Sbjct: 101 LIEAMLQTG-VKKFIF-SSTAAV-YGEPTTSPISETS 134

Length = 329

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 23/175 (13%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V +TGG G+    L   L   G  V          E            LP   E ++   
Sbjct: 2   VLITGGGGYFGFRLGCALAKSGVHVILFDIRRPQQE------------LP---EGIKFIQ 46

Query: 68  ADLSHPDGFDAAIAGCTGVLHVAT-PVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
           AD+      + A+AG   V H+A+  +   ++   E+I +  + GT  I++ C++   V 
Sbjct: 47  ADVRDLSQLEKAVAGVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRR-RVP 105

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
           R++YTS+   +F   + +   DE+    + Y+  LD     Y+ +K++ E+  L+
Sbjct: 106 RLIYTSTFNVIF-GGQPIRNGDES----LPYL-PLDLHVDHYSRTKSIAEQLVLK 154

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 40/162 (24%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD--LSFLKNLPGASERL- 63
           RV VTGG+G+I S   ++LL +G+ V       LD    NSK   L  ++ L G      
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVVI-----LD-NLCNSKRSVLPVIERLGGKHPTFV 55

Query: 64  -----------RIFHADLSHPDGFDAAI--AGCTGV-LHVATPVDFEDKEPEEVITQRAI 109
                       I H    H    D  I  AG   V   V  P+++ D           +
Sbjct: 56  EGDIRNEALLTEILHD---HA--IDTVIHFAGLKAVGESVQKPLEYYDNN---------V 101

Query: 110 NGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF 151
           NGTL  L S +++  VK ++++SS  A  Y D+      E+F
Sbjct: 102 NGTL-RLISAMRAANVKNLIFSSS--ATVYGDQPKIPYVESF 140

Length = 338

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 33/138 (23%), Positives = 50/138 (36%), Gaps = 26/138 (18%)

Query: 13  GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH 72
           G G++   L  +LL  G+ VT T RS                  P          ADL+ 
Sbjct: 5   GCGYLGQRLARQLLAQGWQVTGTTRSP-----EKLAADRPAGVTP--------LAADLTQ 51

Query: 73  PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS 132
           P      +A    ++ ++ P              RA+   L       +   V+RV+Y S
Sbjct: 52  PG----LLADVDHLV-ISLPPPAGSYRGGYDPGLRALLDALA------QLPAVQRVIYLS 100

Query: 133 SNAAVFYNDKDVDMMDET 150
           S   V Y D+  + +DET
Sbjct: 101 S-TGV-YGDQQGEWVDET 116

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 39/202 (19%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT-----TTVRSELDPEHRNSKDLSFLKNLPGASE 61
           +V +TGG G I S LI  LL+ G+ V       T R E  P+H N   L+ ++       
Sbjct: 2   KVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPN---LTVVEGSIADKA 58

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSC 119
            +     D   PD           V+H A       K+P++       N  G   ++++ 
Sbjct: 59  LVDKLFGDFK-PDA----------VVHTAAAY----KDPDDWYEDTLTNVVGGANVVQAA 103

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
            K+G VKR++Y  +  A+ Y  K   M        +D+ R     G SYAISKT  E   
Sbjct: 104 KKAG-VKRLIYFQT--ALCYGLKP--MQQPIR---LDHPR--APPGSSYAISKTAGE--- 150

Query: 180 LEFAEEHGLDLVTLIPSMVVGP 201
             + E  G+D VT   + V GP
Sbjct: 151 -YYLELSGVDFVTFRLANVTGP 171

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 37.9 bits (89), Expect = 0.002
 Identities = 33/149 (22%), Positives = 49/149 (32%), Gaps = 24/149 (16%)

Query: 6   GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           G   VTGG G +   L   L + G  + V  +     DPE       + L  L      +
Sbjct: 1   GTYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAE-----ALLAELEARGAEV 55

Query: 64  RIFHADLSHPDGFDAAIAGC-------TGVLHVATPVD---FEDKEPEEVITQRA----I 109
            +   D+S  D   A +A          GV+H A  +      +   E+    R     +
Sbjct: 56  TVVACDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDF--ARVLAPKV 113

Query: 110 NGTLGILKSCLKSGTVKRVVYTSSNAAVF 138
            G    L    +   +   V  SS A V 
Sbjct: 114 TGAW-NLHEATRDRPLDFFVLFSSIAGVL 141

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 22/129 (17%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTG TG     +I  LL       + VR+ +    RN +  + L    G      +  
Sbjct: 1   IAVTGATGQQGGSVIRHLLA---KGASQVRAVV----RNVEKAATLA-DQGVE----VRQ 48

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            D + P+    A AG + +  +  P    D   E    +        +  +  ++G  K 
Sbjct: 49  GDYNQPELLQKAFAGASKLFIITGPH--YDNTLEIKQGK-------NVADAARRAGV-KH 98

Query: 128 VVYTSSNAA 136
           +  T    A
Sbjct: 99  IYSTGYAFA 107

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 37.2 bits (87), Expect = 0.003
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 24/142 (16%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           + G TG   S ++   L  G+ VT  VR   DP    ++            E+L++   D
Sbjct: 4   IIGATGRTGSAIVREALARGHEVTALVR---DPAKLPAEH-----------EKLKVVQGD 49

Query: 70  LSHPDGFDAAIAGCTGVLH-VATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRV 128
           +   +    A+ G   V+  + T  D                GT  I+ S +K+  VKR+
Sbjct: 50  VLDLEDVKEALEGQDAVISALGTRNDLSP--TTLHSE-----GTRNIV-SAMKAAGVKRL 101

Query: 129 VYTSSNAAVFYNDKDVDMMDET 150
           +     A    +   V ++ +T
Sbjct: 102 IVVGG-AGSLDDRPKVTLVLDT 122

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	249
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02240	352	UDP-glucose 4-epimerase	99.98
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.98
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.98
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.97
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.97
PLN02996	491	fatty acyl-CoA reductase	99.97
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.97
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.97
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.97
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.97
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.97
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.96
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.96
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.96
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.96
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.96
CHL00194	317	ycf39 Ycf39; Provisional	99.95
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.95
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.94
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.94
PLN02503	605	fatty acyl-CoA reductase 2	99.94
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.94
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.94
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.94
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.93
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.93
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.93
PLN00016	378	RNA-binding protein; Provisional	99.93
PRK06482	276	short chain dehydrogenase; Provisional	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK06138	252	short chain dehydrogenase; Provisional	99.92
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.92
PRK07775	274	short chain dehydrogenase; Provisional	99.92
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.92
PRK07067	257	sorbitol dehydrogenase; Provisional	99.92
PRK06194	287	hypothetical protein; Provisional	99.92
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.92
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK05876	275	short chain dehydrogenase; Provisional	99.92
PRK05865	854	hypothetical protein; Provisional	99.92
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.92
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.92
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.91
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08263	275	short chain dehydrogenase; Provisional	99.91
PRK07890	258	short chain dehydrogenase; Provisional	99.91
PRK06182	273	short chain dehydrogenase; Validated	99.91
PRK09135	249	pteridine reductase; Provisional	99.91
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.91
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.91
PRK05993	277	short chain dehydrogenase; Provisional	99.91
PRK12746	254	short chain dehydrogenase; Provisional	99.91
PRK06914	280	short chain dehydrogenase; Provisional	99.91
PRK07806	248	short chain dehydrogenase; Provisional	99.91
PRK05717	255	oxidoreductase; Validated	99.91
PRK08628	258	short chain dehydrogenase; Provisional	99.91
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
PRK07074	257	short chain dehydrogenase; Provisional	99.91
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.91
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.91
PLN02253	280	xanthoxin dehydrogenase	99.91
PRK07024	257	short chain dehydrogenase; Provisional	99.91
PRK06500	249	short chain dehydrogenase; Provisional	99.9
PRK06128	300	oxidoreductase; Provisional	99.9
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK12829	264	short chain dehydrogenase; Provisional	99.9
PRK06181	263	short chain dehydrogenase; Provisional	99.9
PRK07825	273	short chain dehydrogenase; Provisional	99.9
PRK06179	270	short chain dehydrogenase; Provisional	99.9
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.9
PRK07774	250	short chain dehydrogenase; Provisional	99.9
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.9
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.9
PRK06701	290	short chain dehydrogenase; Provisional	99.9
PRK12939	250	short chain dehydrogenase; Provisional	99.9
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK07060	245	short chain dehydrogenase; Provisional	99.9
PRK05875	276	short chain dehydrogenase; Provisional	99.9
PRK12827	249	short chain dehydrogenase; Provisional	99.9
PRK08264	238	short chain dehydrogenase; Validated	99.9
PRK06123	248	short chain dehydrogenase; Provisional	99.89
PRK06841	255	short chain dehydrogenase; Provisional	99.89
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.89
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK08589	272	short chain dehydrogenase; Validated	99.89
PRK12828	239	short chain dehydrogenase; Provisional	99.89
PRK08265	261	short chain dehydrogenase; Provisional	99.89
PRK12747	252	short chain dehydrogenase; Provisional	99.89
PRK10538	248	malonic semialdehyde reductase; Provisional	99.89
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.89
PRK12320	699	hypothetical protein; Provisional	99.89
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.89
PRK09291	257	short chain dehydrogenase; Provisional	99.89
PRK12937	245	short chain dehydrogenase; Provisional	99.89
PRK06101	240	short chain dehydrogenase; Provisional	99.89
PRK06114	254	short chain dehydrogenase; Provisional	99.89
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.89
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK08219	227	short chain dehydrogenase; Provisional	99.89
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.89
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.89
PRK07478	254	short chain dehydrogenase; Provisional	99.89
PRK06196	315	oxidoreductase; Provisional	99.89
PRK08267	260	short chain dehydrogenase; Provisional	99.89
PRK08643	256	acetoin reductase; Validated	99.89
PRK07985	294	oxidoreductase; Provisional	99.88
PRK05867	253	short chain dehydrogenase; Provisional	99.88
PRK05693	274	short chain dehydrogenase; Provisional	99.88
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.88
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK12743	256	oxidoreductase; Provisional	99.88
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK07856	252	short chain dehydrogenase; Provisional	99.88
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.88
PRK09134	258	short chain dehydrogenase; Provisional	99.88
PRK07035	252	short chain dehydrogenase; Provisional	99.88
PRK05650	270	short chain dehydrogenase; Provisional	99.88
PRK06398	258	aldose dehydrogenase; Validated	99.88
PRK07063	260	short chain dehydrogenase; Provisional	99.88
PRK06172	253	short chain dehydrogenase; Provisional	99.88
PRK07814	263	short chain dehydrogenase; Provisional	99.88
PRK12744	257	short chain dehydrogenase; Provisional	99.88
PRK08017	256	oxidoreductase; Provisional	99.88
PRK06197	306	short chain dehydrogenase; Provisional	99.88
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.88
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.88
PRK09186	256	flagellin modification protein A; Provisional	99.88
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.88
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.88
PRK06057	255	short chain dehydrogenase; Provisional	99.88
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.87
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.87
PRK06523	260	short chain dehydrogenase; Provisional	99.87
PRK08251	248	short chain dehydrogenase; Provisional	99.87
PRK08324	681	short chain dehydrogenase; Validated	99.87
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.87
PRK05866	293	short chain dehydrogenase; Provisional	99.87
PRK07326	237	short chain dehydrogenase; Provisional	99.87
PRK07454	241	short chain dehydrogenase; Provisional	99.87
PRK08226	263	short chain dehydrogenase; Provisional	99.87
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.87
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.87
PRK08339	263	short chain dehydrogenase; Provisional	99.87
PRK07069	251	short chain dehydrogenase; Validated	99.87
PRK09072	263	short chain dehydrogenase; Provisional	99.87
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.87
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.87
PRK07102	243	short chain dehydrogenase; Provisional	99.87
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.87
PRK06139	330	short chain dehydrogenase; Provisional	99.87
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.87
PRK07041	230	short chain dehydrogenase; Provisional	99.87
PRK06949	258	short chain dehydrogenase; Provisional	99.87
PRK05872	296	short chain dehydrogenase; Provisional	99.87
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07109	334	short chain dehydrogenase; Provisional	99.86
PRK07677	252	short chain dehydrogenase; Provisional	99.86
PRK07904	253	short chain dehydrogenase; Provisional	99.86
PRK08278	273	short chain dehydrogenase; Provisional	99.86
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.86
PRK07577	234	short chain dehydrogenase; Provisional	99.86
PRK09242	257	tropinone reductase; Provisional	99.86
PRK06198	260	short chain dehydrogenase; Provisional	99.86
PRK07576	264	short chain dehydrogenase; Provisional	99.86
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.86
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.86
PRK07023	243	short chain dehydrogenase; Provisional	99.86
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK06940	275	short chain dehydrogenase; Provisional	99.85
PRK05854	313	short chain dehydrogenase; Provisional	99.85
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK07062	265	short chain dehydrogenase; Provisional	99.85
PRK12742	237	oxidoreductase; Provisional	99.85
PRK06484	520	short chain dehydrogenase; Validated	99.85
PLN02260	668	probable rhamnose biosynthetic enzyme	99.85
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK07831	262	short chain dehydrogenase; Provisional	99.85
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.85
PRK06483	236	dihydromonapterin reductase; Provisional	99.85
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.85
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.84
PRK06953	222	short chain dehydrogenase; Provisional	99.84
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.84
PRK05855	582	short chain dehydrogenase; Validated	99.84
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.84
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.84
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.84
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.84
PRK08703	239	short chain dehydrogenase; Provisional	99.84
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.84
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.84
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK08177	225	short chain dehydrogenase; Provisional	99.84
PRK07791	286	short chain dehydrogenase; Provisional	99.84
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK06924	251	short chain dehydrogenase; Provisional	99.84
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.83
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.83
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PLN02780	320	ketoreductase/ oxidoreductase	99.83
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.83
PRK07832	272	short chain dehydrogenase; Provisional	99.83
PRK07201	657	short chain dehydrogenase; Provisional	99.83
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK06125	259	short chain dehydrogenase; Provisional	99.82
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK05884	223	short chain dehydrogenase; Provisional	99.82
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK05599	246	hypothetical protein; Provisional	99.82
PRK08862	227	short chain dehydrogenase; Provisional	99.82
PRK06484	520	short chain dehydrogenase; Validated	99.81
PRK07578	199	short chain dehydrogenase; Provisional	99.81
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.81
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.81
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.81
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.8
KOG0725	270	consensus Reductases with broad range of substrate	99.79
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.79
PRK08303	305	short chain dehydrogenase; Provisional	99.79
PRK12367	245	short chain dehydrogenase; Provisional	99.78
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.78
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.77
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.76
PLN00015	308	protochlorophyllide reductase	99.76
KOG1208	314	consensus Dehydrogenases with different specificit	99.75
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.75
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.74
COG2910	211	Putative NADH-flavin reductase [General function p	99.73
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.72
COG1028	251	FabG Dehydrogenases with different specificities (	99.71
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.71
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.7
KOG2774	366	consensus NAD dependent epimerase [General functio	99.69
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.68
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.68
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.67
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.66
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.65
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.64
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.64
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.63
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.59
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.48
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.48
PRK06720	169	hypothetical protein; Provisional	99.45
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.41
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.4
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.37
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.32
PTZ00325	321	malate dehydrogenase; Provisional	99.3
PRK08309	177	short chain dehydrogenase; Provisional	99.2
PLN00106	323	malate dehydrogenase	99.19
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.12
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.08
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	99.04
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	98.87
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.86
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.85
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.85
PRK09620	229	hypothetical protein; Provisional	98.84
PRK05086	312	malate dehydrogenase; Provisional	98.72
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.67
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.64
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.63
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.57
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.49
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.48
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.43
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.37
PRK14982	340	acyl-ACP reductase; Provisional	98.36
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.34
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.33
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.28
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.23
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.13
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.08
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.06
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.06
PRK05442	326	malate dehydrogenase; Provisional	98.06
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.0
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.99
PLN02602	350	lactate dehydrogenase	97.95
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.93
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.92
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.9
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.9
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.89
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.89
PRK06223	307	malate dehydrogenase; Reviewed	97.89
PTZ00117	319	malate dehydrogenase; Provisional	97.88
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.8
PRK09496	453	trkA potassium transporter peripheral membrane com	97.78
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.77
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.76
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.76
COG3268	382	Uncharacterized conserved protein [Function unknow	97.75
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.74
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.71
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.69
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.69
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.68
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.68
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.63
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.62
PRK04148	134	hypothetical protein; Provisional	97.59
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.56
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.54
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.5
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.44
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.42
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.41
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.41
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.41
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.39
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.38
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.38
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.36
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.36
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.36
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.32
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.32
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.31
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.3
PRK10669	558	putative cation:proton antiport protein; Provision	97.29
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.28
PRK09496	453	trkA potassium transporter peripheral membrane com	97.28
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.24
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.23
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.22
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.21
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.19
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	97.18
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.18
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.14
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.14
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.13
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.13
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.12
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.09
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.08
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.07
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.06
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.03
PRK08328	231	hypothetical protein; Provisional	97.03
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.01
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.01
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.0
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.99
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.96
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.96
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.95
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.95
PRK08655	437	prephenate dehydrogenase; Provisional	96.93
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.92
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.89
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.88
PLN02383	344	aspartate semialdehyde dehydrogenase	96.87
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.86
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.85
PRK06849	389	hypothetical protein; Provisional	96.85
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.85
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.84
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.83
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.81
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.81
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.8
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.8
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.79
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.77
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.77
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.76
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.76
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.75
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.74
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.72
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.72
PRK08223	287	hypothetical protein; Validated	96.69
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.69
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.69
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.68
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.68
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.68
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.66
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.66
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.65
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.64
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.63
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.62
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.57
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.57
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.56
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.55
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.54
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.54
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.53
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.53
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.52
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.51
PRK07417	279	arogenate dehydrogenase; Reviewed	96.5
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.49
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.47
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.46
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.46
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.41
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.39
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.38
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.37
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.34
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.34
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.33
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.32
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.32
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	96.31
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.31
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.31
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.31
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.28
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.24
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.23
PRK07877	722	hypothetical protein; Provisional	96.22
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.22
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.21
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.21
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.19
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.18
PLN00203	519	glutamyl-tRNA reductase	96.18
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.16
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.15
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.15
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.13
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.12
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.1
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.09
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.09
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.08
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.07
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.07
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.03
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.98
PRK10537	393	voltage-gated potassium channel; Provisional	95.98
PRK13243	333	glyoxylate reductase; Reviewed	95.97
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.96
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.94
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.92
PRK08818	370	prephenate dehydrogenase; Provisional	95.92
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.91
PRK12480	330	D-lactate dehydrogenase; Provisional	95.9
PRK14851	679	hypothetical protein; Provisional	95.87
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	95.87
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.86
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.85
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	95.84

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=4.3e-39  Score=264.95  Aligned_cols=237  Identities=45%  Similarity=0.715  Sum_probs=201.1

Q ss_pred             CCC-CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEE-GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~-~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |.. .+++|+||||+||||++|++.|+++||.|+++.|++.     ..+..+.+..++....++..+.+||+|++++.++
T Consensus         1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~-----~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~a   75 (327)
T KOG1502|consen    1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPE-----DEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKA   75 (327)
T ss_pred             CCCCCCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcc-----hhhhHHHHHhcccCcccceEEeccccccchHHHH
Confidence            444 4679999999999999999999999999999999982     2234446777777777899999999999999999


Q ss_pred             HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeecc---CCCccccCCCCCCchh
Q 025660           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYN---DKDVDMMDETFWSDVD  156 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~---~~~~~~~~e~~~~~~~  156 (249)
                      +++||.|+|+|.+..+...++..+.++..+.||.+++++|++.++++|+|++||+.+....   ..+...++|+.|.+.+
T Consensus        76 i~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~  155 (327)
T KOG1502|consen   76 IDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLD  155 (327)
T ss_pred             HhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHH
Confidence            9999999999999888555555589999999999999999999889999999999998765   3456689999999999


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccc
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTL  236 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  236 (249)
                      +.....   +-|..||..+|..+.+++++.+++.+.+-|+.|+||...+..+.....+.+.+.|.........   ..|+
T Consensus       156 ~~~~~~---~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~---~~~V  229 (327)
T KOG1502|consen  156 FCRCKK---LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFW---LAFV  229 (327)
T ss_pred             HHHhhH---HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCc---eeeE
Confidence            876543   5699999999999999999999999999999999999888767777788888888653322221   2299


Q ss_pred             hhhHHHhhhhcc
Q 025660          237 FVYAIAFAFAFN  248 (249)
Q Consensus       237 ~v~d~a~a~~~~  248 (249)
                      |++|+|.|.++.
T Consensus       230 dVrDVA~AHv~a  241 (327)
T KOG1502|consen  230 DVRDVALAHVLA  241 (327)
T ss_pred             eHHHHHHHHHHH
Confidence            999999998753

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=2.6e-37  Score=265.05  Aligned_cols=227  Identities=19%  Similarity=0.130  Sum_probs=173.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+|||||||||||++|+++|+++|++|++++|....    .......+ ..... ...+++++.+|++|.+++.++++
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTG----YQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCc----chhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            45799999999999999999999999999999986510    00011111 00000 11357899999999999999999


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++|+|||+|+....  ...++. .+.++|+.||.+|+++|++.+ +++|||+||+.+|+...  ..+..|+.+       
T Consensus        90 ~~d~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~--~~~~~e~~~-------  158 (348)
T PRK15181         90 NVDYVLHQAALGSVPRSLKDPI-ATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHP--DLPKIEERI-------  158 (348)
T ss_pred             CCCEEEECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCC--CCCCCCCCC-------
Confidence            99999999997543  234555 689999999999999999988 89999999998775432  234555554       


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHH-HHHcCCCcccccccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSL-ALILGNVKLKICCVMNRSHTL  236 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i  236 (249)
                        ..|.+.|+.||..+|.+++.+...++++++++||+++|||+..+.  ...++..+. +...+++...++++.+.+||+
T Consensus       159 --~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i  236 (348)
T PRK15181        159 --GRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFC  236 (348)
T ss_pred             --CCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeE
Confidence              235678999999999999998887899999999999999986532  223444444 445455444558899999999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|+|+++.+
T Consensus       237 ~v~D~a~a~~~  247 (348)
T PRK15181        237 YIENVIQANLL  247 (348)
T ss_pred             EHHHHHHHHHH
Confidence            99999999753

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=2e-36  Score=259.94  Aligned_cols=239  Identities=44%  Similarity=0.787  Sum_probs=173.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |-+++++||||||+||||++++++|+++|++|++++|+..     .......+........+++++.+|+++.+.+.+++
T Consensus         1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~   75 (351)
T PLN02650          1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPA-----NVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI   75 (351)
T ss_pred             CCCCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcc-----hhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH
Confidence            6677889999999999999999999999999999999761     11111112111111235788999999999999999


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +++|.|||+|+.......++....+++|+.++.+|++++.+.+.+++||++||..+++........++|+.+...++...
T Consensus        76 ~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~  155 (351)
T PLN02650         76 RGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRR  155 (351)
T ss_pred             hCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhc
Confidence            99999999999765433344346889999999999999998654679999999876655333222356765543333223


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCc-cHHHHHHHHcCCCcccccccccccccchhh
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAG-SVRSSLALILGNVKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  239 (249)
                      ...|.+.|+.||.++|.+++.+.+.++++++++||+++|||+....... +...+ ....+... .+. ..+.++|+|++
T Consensus       156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~-~~~~~~~~-~~~-~~~~r~~v~V~  232 (351)
T PLN02650        156 KKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITAL-SLITGNEA-HYS-IIKQGQFVHLD  232 (351)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHH-HHhcCCcc-ccC-cCCCcceeeHH
Confidence            3345678999999999999999988899999999999999986543222 22221 22333332 122 23458999999


Q ss_pred             HHHhhhhc
Q 025660          240 AIAFAFAF  247 (249)
Q Consensus       240 d~a~a~~~  247 (249)
                      |+|.++.+
T Consensus       233 Dva~a~~~  240 (351)
T PLN02650        233 DLCNAHIF  240 (351)
T ss_pred             HHHHHHHH
Confidence            99999865

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=3.6e-36  Score=257.09  Aligned_cols=238  Identities=42%  Similarity=0.634  Sum_probs=174.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++||||||+||||++|+++|+++|++|++++|+..     .......+..... ..+++++.+|++|++++.++++++
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~   81 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE-----NQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIAGC   81 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC-----CHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHhcC
Confidence            4678999999999999999999999999999998861     1111111111111 125789999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccC--CCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND--KDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~--~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+.......++...++++|+.++.+|++++.+.+.+++||++||..+|+...  ....+++|+.+....+....
T Consensus        82 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~  161 (338)
T PLN00198         82 DLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSE  161 (338)
T ss_pred             CEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhc
Confidence            9999999975443344444578999999999999998863378999999998876432  12345666654332222223


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccc-cc----ccccccc
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKIC-CV----MNRSHTL  236 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~i  236 (249)
                      ..|.+.|+.||.++|.++..+.+.++++++++||++||||+.....+.++..+.....+......+ .+    ++.++|+
T Consensus       162 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i  241 (338)
T PLN00198        162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISIT  241 (338)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCccee
Confidence            456788999999999999999888899999999999999986544444444444455544433222 22    2247999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|+|.++.+
T Consensus       242 ~V~D~a~a~~~  252 (338)
T PLN00198        242 HVEDVCRAHIF  252 (338)
T ss_pred             EHHHHHHHHHH
Confidence            99999999754

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1e-36  Score=244.95  Aligned_cols=216  Identities=22%  Similarity=0.217  Sum_probs=177.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+||||||+||||++.|.+|++.|++|++++.-..       .....+...     ..+++++|+.|.+.+.++++  ++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~-------g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSN-------GHKIALLKL-----QFKFYEGDLLDRALLTAVFEENKI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCC-------CCHHHhhhc-----cCceEEeccccHHHHHHHHHhcCC
Confidence            47999999999999999999999999999998651       122222221     15799999999999999997  59


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |.|||+||....  +..+|. .+++.|+.||..|+++|++.+ +++|||.||+.+|+.+ . ..|++|+.|..       
T Consensus        69 daViHFAa~~~VgESv~~Pl-~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p-~-~~PI~E~~~~~-------  137 (329)
T COG1087          69 DAVVHFAASISVGESVQNPL-KYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEP-T-TSPISETSPLA-------  137 (329)
T ss_pred             CEEEECccccccchhhhCHH-HHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCC-C-CcccCCCCCCC-------
Confidence            999999998655  667888 999999999999999999999 9999999999976544 3 37999999865       


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC-------CCccHHHHHHHHcCCCc-c-------cc
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-------FAGSVRSSLALILGNVK-L-------KI  226 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~-~-------~~  226 (249)
                        |.|+||.||.+.|++++++...++++.+++|.+++-|.-.++.       ....+..+.....|+.. +       +.
T Consensus       138 --p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T  215 (329)
T COG1087         138 --PINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDT  215 (329)
T ss_pred             --CCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCC
Confidence              6799999999999999999998999999999999999865533       22244566666666542 3       22


Q ss_pred             cccccccccchhhHHHhhhh
Q 025660          227 CCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~  246 (249)
                      .+|...||||||.|+|.|.+
T Consensus       216 ~DGT~iRDYIHV~DLA~aH~  235 (329)
T COG1087         216 KDGTCIRDYIHVDDLADAHV  235 (329)
T ss_pred             CCCCeeeeeeehhHHHHHHH
Confidence            46888999999999999864

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=3.4e-36  Score=249.94  Aligned_cols=217  Identities=31%  Similarity=0.362  Sum_probs=167.9

Q ss_pred             EEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCEE
Q 025660            9 CVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGV   86 (249)
Q Consensus         9 lItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   86 (249)
                      |||||+||||++|+++|+++|  ++|+++++...     . .....+...    ....++++|++|++++.++++++|+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~-----~-~~~~~~~~~----~~~~~~~~Di~d~~~l~~a~~g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPP-----P-KFLKDLQKS----GVKEYIQGDITDPESLEEALEGVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccc-----c-ccchhhhcc----cceeEEEeccccHHHHHHHhcCCceE
Confidence            699999999999999999999  79999998761     0 111111111    12348999999999999999999999


Q ss_pred             EEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCcc--ccCCCCCCchhHhhhcCCC
Q 025660           87 LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSW  164 (249)
Q Consensus        87 ih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~  164 (249)
                      ||+|++.+.....+.+.++++|+.||++++++|++.+ +++|||+||..++........  ..+|+.|.+       ..+
T Consensus        71 ~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~-------~~~  142 (280)
T PF01073_consen   71 FHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYP-------SSP  142 (280)
T ss_pred             EEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCccc-------ccc
Confidence            9999987764444455899999999999999999998 999999999998876332222  235655533       225


Q ss_pred             CchHHHHHHHHHHHHHHHHH---H--cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC-Ccccccccccccccchh
Q 025660          165 GKSYAISKTLTERAALEFAE---E--HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN-VKLKICCVMNRSHTLFV  238 (249)
Q Consensus       165 ~~~Y~~sK~~~e~~~~~~~~---~--~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v  238 (249)
                      .+.|+.||..+|+++.+...   +  ..+.+++|||+.||||++....+    .+.+..+.+ ..+.++.+....+|+|+
T Consensus       143 ~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~----~~~~~~~~g~~~~~~g~~~~~~~~vyV  218 (280)
T PF01073_consen  143 LDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVP----RLVKMVRSGLFLFQIGDGNNLFDFVYV  218 (280)
T ss_pred             cCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccc----hhhHHHHhcccceeecCCCceECcEeH
Confidence            67899999999999998765   1  24999999999999998765433    334444444 45566788888999999


Q ss_pred             hHHHhhhhc
Q 025660          239 YAIAFAFAF  247 (249)
Q Consensus       239 ~d~a~a~~~  247 (249)
                      +|+|.|.+.
T Consensus       219 ~NvA~ahvl  227 (280)
T PF01073_consen  219 ENVAHAHVL  227 (280)
T ss_pred             HHHHHHHHH
Confidence            999999754

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.9e-35  Score=249.94  Aligned_cols=235  Identities=39%  Similarity=0.633  Sum_probs=175.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |...+++||||||+||||++++++|+++|++|+++.|+..     ..+....+........+++++.+|+++++++.+++
T Consensus         1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   75 (322)
T PLN02986          1 MNGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLT-----DRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI   75 (322)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCc-----chHHHHHHHhccCCCCceEEEecCCCCcchHHHHH
Confidence            5556789999999999999999999999999999999861     11111222111112246889999999999999999


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccC---CCccccCCCCCCchhH
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND---KDVDMMDETFWSDVDY  157 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~---~~~~~~~e~~~~~~~~  157 (249)
                      +++|+|||+|+.......++....+++|+.++.++++++++...+++||++||..++++..   ....+++|+.+..+.+
T Consensus        76 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~  155 (322)
T PLN02986         76 EGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSL  155 (322)
T ss_pred             hCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHH
Confidence            9999999999976543334443678999999999999998863378999999987653322   1234577877654332


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccch
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLF  237 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (249)
                      .   ..|.+.|+.||..+|.++..+.++++++++++||+++|||+..+........+.....+...  +  +.+.++|+|
T Consensus       156 ~---~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~v~  228 (322)
T PLN02986        156 C---RETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--F--NNRFYRFVD  228 (322)
T ss_pred             h---hccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--C--CCcCcceeE
Confidence            1   12457899999999999999988889999999999999998654323233445555555432  2  356789999


Q ss_pred             hhHHHhhhhc
Q 025660          238 VYAIAFAFAF  247 (249)
Q Consensus       238 v~d~a~a~~~  247 (249)
                      ++|+|.++..
T Consensus       229 v~Dva~a~~~  238 (322)
T PLN02986        229 VRDVALAHIK  238 (322)
T ss_pred             HHHHHHHHHH
Confidence            9999999753

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=8.4e-35  Score=248.90  Aligned_cols=227  Identities=37%  Similarity=0.607  Sum_probs=171.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++||||||+||||++++++|+++|++|++++|+..     . .....+........+++++.+|++|++++.++++++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~-----~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPD-----D-PKNTHLRELEGGKERLILCKADLQDYEALKAAIDGC   82 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCch-----h-hhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcC
Confidence            4678999999999999999999999999999999761     0 011112222222235788999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC--CccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK--DVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+...   .++. ..+++|+.++.+++++|++.+ +++||++||..++|+...  ...+++|++|.+.++   .
T Consensus        83 d~Vih~A~~~~---~~~~-~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~---~  154 (342)
T PLN02214         83 DGVFHTASPVT---DDPE-QMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDF---C  154 (342)
T ss_pred             CEEEEecCCCC---CCHH-HHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhh---c
Confidence            99999999753   3444 789999999999999999988 889999999754443222  123578887643221   1


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                      ..|.+.|+.||..+|.++..+.++++++++++||++||||+..+.....+..+...+.+... .+  +++.++|+|++|+
T Consensus       155 ~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~-~~--~~~~~~~i~V~Dv  231 (342)
T PLN02214        155 KNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAK-TY--ANLTQAYVDVRDV  231 (342)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-cC--CCCCcCeeEHHHH
Confidence            23567899999999999999988789999999999999998654333334344455554432 22  3567899999999


Q ss_pred             Hhhhhc
Q 025660          242 AFAFAF  247 (249)
Q Consensus       242 a~a~~~  247 (249)
                      |+++..
T Consensus       232 a~a~~~  237 (342)
T PLN02214        232 ALAHVL  237 (342)
T ss_pred             HHHHHH
Confidence            999864

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.7e-35  Score=235.84  Aligned_cols=221  Identities=21%  Similarity=0.196  Sum_probs=181.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      |++|||||+||||++.++.++++..  +|+.++.-..   ..+.+.+..+..    .++..++++|+.|.+.+.++++  
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY---Agn~~~l~~~~~----~~~~~fv~~DI~D~~~v~~~~~~~   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY---AGNLENLADVED----SPRYRFVQGDICDRELVDRLFKEY   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccc---cCCHHHHHhhhc----CCCceEEeccccCHHHHHHHHHhc
Confidence            4799999999999999999999864  5677776431   111122222222    2478999999999999999998  


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++|+|+|.||..+.  +-.++. ..+++|+.||.+|++++++....-+|+++||-.+|+.-.......+|++|..     
T Consensus        74 ~~D~VvhfAAESHVDRSI~~P~-~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~-----  147 (340)
T COG1088          74 QPDAVVHFAAESHVDRSIDGPA-PFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYN-----  147 (340)
T ss_pred             CCCeEEEechhccccccccChh-hhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCC-----
Confidence            58999999998776  455665 8999999999999999999872349999999998765544455788998865     


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccH-HHHHHHHcCCCcccccccccccccchh
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSV-RSSLALILGNVKLKICCVMNRSHTLFV  238 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v  238 (249)
                          |+++|++||+.+..+++++...+|+++++.|+.+-|||...+.  .++ ..+...+.|.+...+++|.+.|||+||
T Consensus       148 ----PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE--KlIP~~I~nal~g~~lpvYGdG~~iRDWl~V  221 (340)
T COG1088         148 ----PSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPVYGDGLQIRDWLYV  221 (340)
T ss_pred             ----CCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch--hhhHHHHHHHHcCCCCceecCCcceeeeEEe
Confidence                7899999999999999999999999999999999999987553  333 366777777777778999999999999


Q ss_pred             hHHHhhh
Q 025660          239 YAIAFAF  245 (249)
Q Consensus       239 ~d~a~a~  245 (249)
                      +|-|+|+
T Consensus       222 eDh~~ai  228 (340)
T COG1088         222 EDHCRAI  228 (340)
T ss_pred             HhHHHHH
Confidence            9999997

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.6e-34  Score=245.61  Aligned_cols=235  Identities=38%  Similarity=0.644  Sum_probs=174.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |.-++|+||||||+||||++++++|+++|++|++++|+..     .......+........+++++.+|+++.+++.+++
T Consensus         1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   75 (325)
T PLN02989          1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPK-----DRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI   75 (325)
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCc-----chhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH
Confidence            5556789999999999999999999999999999988862     10111111111112246889999999999999999


Q ss_pred             cCCCEEEEccccCCCC-CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC---CccccCCCCCCchh
Q 025660           81 AGCTGVLHVATPVDFE-DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK---DVDMMDETFWSDVD  156 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~-~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~~~e~~~~~~~  156 (249)
                      +++|+|||+||..... ..+.....+++|+.++.++++++.+....++||++||..++++...   ...+++|+.+..+.
T Consensus        76 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~  155 (325)
T PLN02989         76 DGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPS  155 (325)
T ss_pred             cCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchh
Confidence            9999999999975431 1223347889999999999999988532689999999887765431   23467888776533


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccc
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTL  236 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  236 (249)
                      ..   ..+.+.|+.||..+|.++..+.+.++++++++||+++|||+..+........+.....++.+.  .  .+.++|+
T Consensus       156 ~~---~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i  228 (325)
T PLN02989        156 FA---EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFV  228 (325)
T ss_pred             Hh---cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCee
Confidence            21   123467999999999999999887899999999999999987643222334555555555433  2  3458999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|+|+++..
T Consensus       229 ~v~Dva~a~~~  239 (325)
T PLN02989        229 DVRDVALAHVK  239 (325)
T ss_pred             EHHHHHHHHHH
Confidence            99999999754

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.7e-34  Score=245.04  Aligned_cols=231  Identities=40%  Similarity=0.631  Sum_probs=170.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++|||||||||||++|+++|+++|++|++++|+..     .......+........+++++.+|+++++++.++++++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN-----DPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGC   77 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC-----chhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCC
Confidence            4578999999999999999999999999999999861     11111222211111246889999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEccccee-ec-cC-CCccccCCCCCCchhHhh
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAV-FY-ND-KDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~-~~-~~-~~~~~~~e~~~~~~~~~~  159 (249)
                      |+|||+|+.......++.+.++++|+.++.++++++.+. + +++||++||..++ ++ .+ ....+++|+.+..+.+. 
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~-  155 (322)
T PLN02662         78 EGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFC-  155 (322)
T ss_pred             CEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHh-
Confidence            999999997654334443478899999999999999887 5 8899999998643 22 11 12345777765443211 


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhh
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  239 (249)
                        ..+.+.|+.+|..+|.++..+.++++++++++||+++|||+..+........+...+.+.+.    .+.+.++|+|++
T Consensus       156 --~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~v~  229 (322)
T PLN02662        156 --EESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT----FPNASYRWVDVR  229 (322)
T ss_pred             --hcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc----CCCCCcCeEEHH
Confidence              11235799999999999999888789999999999999998654322233344555554332    134678999999


Q ss_pred             HHHhhhhc
Q 025660          240 AIAFAFAF  247 (249)
Q Consensus       240 d~a~a~~~  247 (249)
                      |+|+++..
T Consensus       230 Dva~a~~~  237 (322)
T PLN02662        230 DVANAHIQ  237 (322)
T ss_pred             HHHHHHHH
Confidence            99999753

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=1.2e-34  Score=252.03  Aligned_cols=231  Identities=16%  Similarity=0.161  Sum_probs=169.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCC--CCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLP--GASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +.|+|||||||||||++|+++|+++ |++|++++|+.        .+...+....  ....+++++.+|++|.+++.+++
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~--------~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~   84 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYN--------DKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI   84 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCc--------hhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh
Confidence            3468999999999999999999998 59999999876        3333332211  11236899999999999999999


Q ss_pred             cCCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH-
Q 025660           81 AGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY-  157 (249)
Q Consensus        81 ~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~-  157 (249)
                      +++|+|||+|+....  ...++. ..+..|+.++.+++++|++.+  ++||++||..+|+....  .+++|+.|...+. 
T Consensus        85 ~~~d~ViHlAa~~~~~~~~~~~~-~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~--~~~~e~~p~~~~~~  159 (386)
T PLN02427         85 KMADLTINLAAICTPADYNTRPL-DTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIG--SFLPKDHPLRQDPA  159 (386)
T ss_pred             hcCCEEEEcccccChhhhhhChH-HHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcC--CCCCcccccccccc
Confidence            999999999997543  223344 566789999999999998876  69999999987654322  2334443322110 


Q ss_pred             ------------hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCC---------CCCccHHHHHH
Q 025660          158 ------------IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICP---------KFAGSVRSSLA  216 (249)
Q Consensus       158 ------------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~---------~~~~~~~~~~~  216 (249)
                                  ..+...|.+.|+.||..+|+++..+...++++++++||++||||+...         ..+.++..+..
T Consensus       160 ~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~  239 (386)
T PLN02427        160 FYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN  239 (386)
T ss_pred             cccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHH
Confidence                        011223567899999999999999887789999999999999997531         12233444443


Q ss_pred             -HHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          217 -LILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       217 -~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ...+.+...++++.+.++|+|++|+|.++..
T Consensus       240 ~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~  271 (386)
T PLN02427        240 NLLRREPLKLVDGGQSQRTFVYIKDAIEAVLL  271 (386)
T ss_pred             HHhcCCCeEEECCCCceECcEeHHHHHHHHHH
Confidence             3444444445677888999999999999753

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=2.4e-34  Score=246.67  Aligned_cols=222  Identities=19%  Similarity=0.201  Sum_probs=167.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCC-ChhhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-HPDGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~   83 (249)
                      |+|||||||||||++|+++|+++ |++|++++|+.        .....+..    ...++++.+|++ +.+.+.++++++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~--------~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~   69 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQT--------DRLGDLVN----HPRMHFFEGDITINKEWIEYHVKKC   69 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcH--------HHHHHhcc----CCCeEEEeCCCCCCHHHHHHHHcCC
Confidence            57999999999999999999987 69999999875        33222221    135889999998 678888889999


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCC-CchhHhhh
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFW-SDVDYIRK  160 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~-~~~~~~~~  160 (249)
                      |+|||+|+....  ...++. ..+++|+.++++++++|++.+  ++|||+||..+|+...  ..+++|+.+ ....   +
T Consensus        70 d~ViH~aa~~~~~~~~~~p~-~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~--~~~~~ee~~~~~~~---~  141 (347)
T PRK11908         70 DVILPLVAIATPATYVKQPL-RVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCP--DEEFDPEASPLVYG---P  141 (347)
T ss_pred             CEEEECcccCChHHhhcCcH-HHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCC--CcCcCccccccccC---c
Confidence            999999997543  234554 778999999999999999876  6999999998765432  224555432 2111   1


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC------CCccHH-HHHHHHcCCCccccccccccc
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVR-SSLALILGNVKLKICCVMNRS  233 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~  233 (249)
                      ...|.+.|+.||.++|+++..+...++++++++||+++|||+..+.      ..+++. .+.+...+++...++++++.+
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r  221 (347)
T PRK11908        142 INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKR  221 (347)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceee
Confidence            1245778999999999999999887899999999999999985431      123343 444444555444446788999


Q ss_pred             ccchhhHHHhhhhc
Q 025660          234 HTLFVYAIAFAFAF  247 (249)
Q Consensus       234 ~~i~v~d~a~a~~~  247 (249)
                      +|+|++|+++++..
T Consensus       222 ~~i~v~D~a~a~~~  235 (347)
T PRK11908        222 AFTDIDDGIDALMK  235 (347)
T ss_pred             ccccHHHHHHHHHH
Confidence            99999999999754

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.5e-34  Score=248.14  Aligned_cols=222  Identities=21%  Similarity=0.162  Sum_probs=171.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++|+||||||+||||++++++|+++|++|++++|+..        ..... .... ...++.++.+|+++.+++.++++.
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~--------~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~   73 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPP--------TSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAE   73 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCc--------cchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhh
Confidence            3578999999999999999999999999999998862        11111 1111 123567899999999999999985


Q ss_pred             --CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           83 --CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        83 --~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                        +|+|||+|+....  ...++. ..+++|+.++.++++++++.+..++||++||..+|+.. ....+++|+++.     
T Consensus        74 ~~~d~vih~A~~~~~~~~~~~~~-~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~-~~~~~~~e~~~~-----  146 (349)
T TIGR02622        74 FKPEIVFHLAAQPLVRKSYADPL-ETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRND-EWVWGYRETDPL-----  146 (349)
T ss_pred             cCCCEEEECCcccccccchhCHH-HHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCC-CCCCCCccCCCC-----
Confidence              6999999996443  234555 78899999999999999876536799999999876432 223356666553     


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHc-------CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccccccc
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEH-------GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMN  231 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (249)
                          .|.+.|+.||.++|.+++.++..+       +++++++||+++|||+... ...++..+.+....++.+.++++.+
T Consensus       147 ----~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~~~~~~~~~~~~~~g~~~~~~~g~~  221 (349)
T TIGR02622       147 ----GGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA-EDRLIPDVIRAFSSNKIVIIRNPDA  221 (349)
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch-hhhhhHHHHHHHhcCCCeEECCCCc
Confidence                357889999999999999887654       8999999999999997532 1244556666665666667788899


Q ss_pred             ccccchhhHHHhhhh
Q 025660          232 RSHTLFVYAIAFAFA  246 (249)
Q Consensus       232 ~~~~i~v~d~a~a~~  246 (249)
                      .++|+|++|+|.++.
T Consensus       222 ~rd~i~v~D~a~a~~  236 (349)
T TIGR02622       222 TRPWQHVLEPLSGYL  236 (349)
T ss_pred             ccceeeHHHHHHHHH
Confidence            999999999999875

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=2.5e-34  Score=247.25  Aligned_cols=223  Identities=19%  Similarity=0.192  Sum_probs=167.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEE-EcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   82 (249)
                      ++|||||||||||++++++|+++|++++++ +|...      ......+.... ...++.++.+|++|.+++.++++.  
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTY------AGNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQ   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcc------ccchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcC
Confidence            589999999999999999999999876544 44320      01111111111 123578899999999999999984  


Q ss_pred             CCEEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhc--------CCcceEEEEcccceeeccCCCccccCCCCC
Q 025660           83 CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKS--------GTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (249)
Q Consensus        83 ~d~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~--------~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (249)
                      +|+|||+||.....  .+++ +.++++|+.++.++++++++.        ..+++||++||..+|+.......+++|+.+
T Consensus        75 ~D~Vih~A~~~~~~~~~~~~-~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~  153 (355)
T PRK10217         75 PDCVMHLAAESHVDRSIDGP-AAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTP  153 (355)
T ss_pred             CCEEEECCcccCcchhhhCh-HHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCC
Confidence            89999999976542  2334 489999999999999999863        225799999999876543333446788765


Q ss_pred             CchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHH-HHHHHHcCCCccccccccc
Q 025660          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR-SSLALILGNVKLKICCVMN  231 (249)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  231 (249)
                      .         .|.+.|+.||.++|.+++.++++++++++++||+++|||+..+.  .++. .+.+...+++...++++++
T Consensus       154 ~---------~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~--~~~~~~~~~~~~~~~~~~~g~g~~  222 (355)
T PRK10217        154 Y---------APSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKPLPVYGNGQQ  222 (355)
T ss_pred             C---------CCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc--cHHHHHHHHHhcCCCceEeCCCCe
Confidence            3         35688999999999999999888899999999999999986432  3333 3344554544445688999


Q ss_pred             ccccchhhHHHhhhhc
Q 025660          232 RSHTLFVYAIAFAFAF  247 (249)
Q Consensus       232 ~~~~i~v~d~a~a~~~  247 (249)
                      .++|+|++|+++++..
T Consensus       223 ~~~~i~v~D~a~a~~~  238 (355)
T PRK10217        223 IRDWLYVEDHARALYC  238 (355)
T ss_pred             eeCcCcHHHHHHHHHH
Confidence            9999999999999753

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=7.3e-34  Score=244.24  Aligned_cols=236  Identities=40%  Similarity=0.652  Sum_probs=168.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +.++||||||+||||++++++|+++|++|++++|+.        .....+........+++++.+|+++.+++.++++++
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDP--------AKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGC   80 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCC
Confidence            457999999999999999999999999999999876        332222111111246889999999999999999999


Q ss_pred             CEEEEccccCCCCC----CChH----HHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCC---ccccCCCCC
Q 025660           84 TGVLHVATPVDFED----KEPE----EVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD---VDMMDETFW  152 (249)
Q Consensus        84 d~vih~a~~~~~~~----~~~~----~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~---~~~~~e~~~  152 (249)
                      |+|||+|+......    .++.    ...++.|+.++.+|+++|++.+.+++||++||..+|+..+..   ..+++|+.+
T Consensus        81 d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~  160 (353)
T PLN02896         81 DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQ  160 (353)
T ss_pred             CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccC
Confidence            99999999764321    1222    123455679999999999887436899999999887643321   245677643


Q ss_pred             CchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc-ccccccc-
Q 025660          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK-LKICCVM-  230 (249)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-  230 (249)
                      ...+.......|.++|+.||.++|+++..+.+.++++++++||++||||+.....+..+..+...+.+... ..+..+. 
T Consensus       161 ~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  240 (353)
T PLN02896        161 TPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVN  240 (353)
T ss_pred             CcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccc
Confidence            22211111223456899999999999999998889999999999999998765455544444444444432 2121122 


Q ss_pred             ---cccccchhhHHHhhhhc
Q 025660          231 ---NRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       231 ---~~~~~i~v~d~a~a~~~  247 (249)
                         ..++|+|++|+|.++..
T Consensus       241 ~~~~~~dfi~v~Dva~a~~~  260 (353)
T PLN02896        241 SRMGSIALVHIEDICDAHIF  260 (353)
T ss_pred             cccCceeEEeHHHHHHHHHH
Confidence               24699999999999754

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=5.1e-34  Score=251.02  Aligned_cols=238  Identities=13%  Similarity=0.104  Sum_probs=165.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccC---C---------chhhhhhccCCCCCCCeEEEEcCCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHR---N---------SKDLSFLKNLPGASERLRIFHADLS   71 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~---------~~~~~~l~~~~~~~~~~~~~~~Dl~   71 (249)
                      ++|+||||||+||||++|+++|+++|++|++++|........   .         .+..+.+...  ...+++++.+|++
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~~v~~Dl~  123 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV--SGKEIELYVGDIC  123 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh--hCCcceEEECCCC
Confidence            567899999999999999999999999999988643100000   0         0001111111  1135789999999


Q ss_pred             ChhhHHHHHc--CCCEEEEccccCCC--CCCCh--HHHhhhhHHhHHHHHHHHHHhcCCcc-eEEEEcccceeeccCCCc
Q 025660           72 HPDGFDAAIA--GCTGVLHVATPVDF--EDKEP--EEVITQRAINGTLGILKSCLKSGTVK-RVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        72 ~~~~~~~~~~--~~d~vih~a~~~~~--~~~~~--~~~~~~~n~~~t~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~  144 (249)
                      |.+++.++++  ++|+|||+|+....  ...++  .+..+++|+.|+.+++++|++.+ ++ +||++||..+|+...   
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~---  199 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPN---  199 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCC---
Confidence            9999999998  48999999986433  11121  23567899999999999999987 64 999999998775321   


Q ss_pred             cccCCCCCCch-----hHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC-------------
Q 025660          145 DMMDETFWSDV-----DYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-------------  206 (249)
Q Consensus       145 ~~~~e~~~~~~-----~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~-------------  206 (249)
                      .+++|......     +-......|.+.|+.||.++|.+++.+...++++++++||++||||+....             
T Consensus       200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence            12333211000     000002346788999999999999999888899999999999999986431             


Q ss_pred             --CCccHHH-HHHHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          207 --FAGSVRS-SLALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       207 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ...++.. +.+...+.+...++++++.|||+||+|+|+++..
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~  323 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEI  323 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHH
Confidence              0122333 3344444443355889999999999999999743

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=3.2e-33  Score=241.38  Aligned_cols=224  Identities=17%  Similarity=0.126  Sum_probs=168.2

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |...+|+|||||||||||+++++.|.++||+|++++|...        .  .+.   ......+++.+|+++.+.+..++
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~--------~--~~~---~~~~~~~~~~~Dl~d~~~~~~~~   83 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKN--------E--HMS---EDMFCHEFHLVDLRVMENCLKVT   83 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccc--------c--ccc---cccccceEEECCCCCHHHHHHHH
Confidence            3446789999999999999999999999999999998651        1  000   00112467899999999999989


Q ss_pred             cCCCEEEEccccCCC---CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCC--ccccCCCCCCch
Q 025660           81 AGCTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD--VDMMDETFWSDV  155 (249)
Q Consensus        81 ~~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~e~~~~~~  155 (249)
                      +++|+|||+|+....   ...++. ..+..|+.++.+|+++|++.+ +++|||+||..+|+.....  ..++.|+.+.  
T Consensus        84 ~~~D~Vih~Aa~~~~~~~~~~~~~-~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~--  159 (370)
T PLN02695         84 KGVDHVFNLAADMGGMGFIQSNHS-VIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAW--  159 (370)
T ss_pred             hCCCEEEEcccccCCccccccCch-hhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCC--
Confidence            899999999986532   122333 567889999999999999988 8999999999876543221  1235554311  


Q ss_pred             hHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC--CccHH-HHHHHHcCCCcc-ccccccc
Q 025660          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVR-SSLALILGNVKL-KICCVMN  231 (249)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~--~~~~~-~~~~~~~~~~~~-~~~~~~~  231 (249)
                           ...|.+.|+.+|..+|.++..+...++++++++||+++|||+.....  ..+.. ++.+.+..+..+ .++++++
T Consensus       160 -----p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~  234 (370)
T PLN02695        160 -----PAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQ  234 (370)
T ss_pred             -----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCe
Confidence                 12367899999999999999998878999999999999999754321  12232 333444444444 4588999


Q ss_pred             ccccchhhHHHhhhh
Q 025660          232 RSHTLFVYAIAFAFA  246 (249)
Q Consensus       232 ~~~~i~v~d~a~a~~  246 (249)
                      .++|+|++|+++++.
T Consensus       235 ~r~~i~v~D~a~ai~  249 (370)
T PLN02695        235 TRSFTFIDECVEGVL  249 (370)
T ss_pred             EEeEEeHHHHHHHHH
Confidence            999999999999975

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=1.6e-33  Score=228.60  Aligned_cols=215  Identities=25%  Similarity=0.261  Sum_probs=172.0

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--CCE
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--CTG   85 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   85 (249)
                      |||||||||||++++++|+++|++|+.+.|+.        .........    .+++++.+|+.|.+++.++++.  +|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~--------~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSS--------NSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCS--------TGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccc--------ccccccccc----ceEEEEEeeccccccccccccccCceE
Confidence            79999999999999999999999999999887        222111110    0678999999999999999985  599


Q ss_pred             EEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           86 VLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        86 vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |||+|+....  ...+.. ..++.|+.+++++++++.+.+ ++++|++||..+|+..  ...+++|+++.         .
T Consensus        69 vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~--~~~~~~e~~~~---------~  135 (236)
T PF01370_consen   69 VIHLAAFSSNPESFEDPE-EIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDP--DGEPIDEDSPI---------N  135 (236)
T ss_dssp             EEEEBSSSSHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSS--SSSSBETTSGC---------C
T ss_pred             EEEeeccccccccccccc-ccccccccccccccccccccc-cccccccccccccccc--ccccccccccc---------c
Confidence            9999998531  122333 788999999999999999999 7999999998865444  45577888764         3


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC-CCCCCCccHHHHHHHH-cCCCcccccccccccccchhhHH
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF-ICPKFAGSVRSSLALI-LGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                      |.+.|+.+|..+|++++.+.+.++++++++||+.+|||. .......++..+.... .+++...++++++.++|+|++|+
T Consensus       136 ~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  215 (236)
T PF01370_consen  136 PLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDL  215 (236)
T ss_dssp             HSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHH
Confidence            567899999999999999998889999999999999999 2223345555455444 45555566899999999999999


Q ss_pred             Hhhhhc
Q 025660          242 AFAFAF  247 (249)
Q Consensus       242 a~a~~~  247 (249)
                      |+++.+
T Consensus       216 a~~~~~  221 (236)
T PF01370_consen  216 AEAIVA  221 (236)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999854

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=4.2e-33  Score=238.64  Aligned_cols=226  Identities=19%  Similarity=0.140  Sum_probs=168.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-C-CCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-L-PGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      |+||||||+||||++|+++|+++|++|++++|+...   ........+.+ . .....+++++.+|++|.+++.++++. 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSS---FNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcc---cchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC
Confidence            589999999999999999999999999999997610   00011111111 0 00123578999999999999999985 


Q ss_pred             -CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCc---ceEEEEcccceeeccCCCccccCCCCCCchh
Q 025660           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTV---KRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (249)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (249)
                       +|+|||+|+....  ...++. ..+++|+.|+.+++++|++.+ +   .+||++||..+|+.. . ..+++|+.+.   
T Consensus        78 ~~d~ViH~Aa~~~~~~~~~~~~-~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~-~-~~~~~E~~~~---  150 (343)
T TIGR01472        78 KPTEIYNLAAQSHVKVSFEIPE-YTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKV-Q-EIPQNETTPF---  150 (343)
T ss_pred             CCCEEEECCcccccchhhhChH-HHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCC-C-CCCCCCCCCC---
Confidence             6999999998654  222333 677889999999999999876 3   389999999876543 2 3357777663   


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC-CCccHHHHH-HHHcCCC-ccccccccccc
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-FAGSVRSSL-ALILGNV-KLKICCVMNRS  233 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~-~~~~~~~~~-~~~~~~~-~~~~~~~~~~~  233 (249)
                            .|.+.|+.||..+|.+++.+++.++++++..|+.++|||+.... ....+..+. ....+.+ .+.++++++.+
T Consensus       151 ------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  224 (343)
T TIGR01472       151 ------YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKR  224 (343)
T ss_pred             ------CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCcccc
Confidence                  36789999999999999999888899999999999999974322 222233333 3444543 34558899999


Q ss_pred             ccchhhHHHhhhhc
Q 025660          234 HTLFVYAIAFAFAF  247 (249)
Q Consensus       234 ~~i~v~d~a~a~~~  247 (249)
                      ||+|++|+|.++..
T Consensus       225 d~i~V~D~a~a~~~  238 (343)
T TIGR01472       225 DWGHAKDYVEAMWL  238 (343)
T ss_pred             CceeHHHHHHHHHH
Confidence            99999999999753

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=6.1e-33  Score=255.58  Aligned_cols=224  Identities=20%  Similarity=0.251  Sum_probs=169.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh-HHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-FDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~   81 (249)
                      .+|+|||||||||||++|+++|+++ ||+|++++|..        .....+..    ..+++++.+|++|.++ +.++++
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~--------~~~~~~~~----~~~~~~~~gDl~d~~~~l~~~l~  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGS--------DAISRFLG----HPRFHFVEGDISIHSEWIEYHIK  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCc--------hhhhhhcC----CCceEEEeccccCcHHHHHHHhc
Confidence            3578999999999999999999986 79999999976        22221111    1358899999999765 577888


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++|+|||+||....  ...++. ..+++|+.++.+++++|++.+  ++|||+||..+|+..  ...+++|+.+...  ..
T Consensus       382 ~~D~ViHlAa~~~~~~~~~~~~-~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~--~~~~~~E~~~~~~--~~  454 (660)
T PRK08125        382 KCDVVLPLVAIATPIEYTRNPL-RVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMC--TDKYFDEDTSNLI--VG  454 (660)
T ss_pred             CCCEEEECccccCchhhccCHH-HHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCC--CCCCcCccccccc--cC
Confidence            99999999997654  233444 678999999999999999986  699999999876532  2346777765321  11


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC------CCccHH-HHHHHHcCCCcccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVR-SSLALILGNVKLKICCVMNR  232 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~  232 (249)
                      +...|.+.|+.||.++|.+++.+.+.++++++++||+++|||+....      ...++. ++.....+++...++++.+.
T Consensus       455 p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~  534 (660)
T PRK08125        455 PINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQK  534 (660)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCcee
Confidence            12235678999999999999999887899999999999999986431      112333 34444444444445788999


Q ss_pred             cccchhhHHHhhhh
Q 025660          233 SHTLFVYAIAFAFA  246 (249)
Q Consensus       233 ~~~i~v~d~a~a~~  246 (249)
                      ++|+|++|+|.++.
T Consensus       535 rd~i~v~Dva~a~~  548 (660)
T PRK08125        535 RCFTDIRDGIEALF  548 (660)
T ss_pred             eceeeHHHHHHHHH
Confidence            99999999999974

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.2e-32  Score=239.87  Aligned_cols=221  Identities=20%  Similarity=0.254  Sum_probs=164.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +.|+|||||||||||++|+++|+++|++|++++|...    ...+....+.   . ..+++++.+|+.+..     +.++
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~----~~~~~~~~~~---~-~~~~~~~~~Di~~~~-----~~~~  185 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFT----GRKENLVHLF---G-NPRFELIRHDVVEPI-----LLEV  185 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC----ccHhHhhhhc---c-CCceEEEECcccccc-----ccCC
Confidence            4578999999999999999999999999999998641    0011111111   1 135788899997753     4579


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+....  ...++. .++++|+.+|.+|+++|++.+ . +||++||..+|+..  ...+++|+.+...++    
T Consensus       186 D~ViHlAa~~~~~~~~~~p~-~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~--~~~p~~E~~~~~~~p----  256 (436)
T PLN02166        186 DQIYHLACPASPVHYKYNPV-KTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP--LEHPQKETYWGNVNP----  256 (436)
T ss_pred             CEEEECceeccchhhccCHH-HHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCC--CCCCCCccccccCCC----
Confidence            999999997543  223454 889999999999999999987 4 89999999876533  223566764322111    


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHH-HHHHHHcCCCcccccccccccccchhhH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR-SSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                      ..|.+.|+.+|..+|+++..+.+.++++++++||+++|||+.......++. ++.+.+.+.....++++.+.++|+|++|
T Consensus       257 ~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~D  336 (436)
T PLN02166        257 IGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSD  336 (436)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHH
Confidence            234678999999999999999887899999999999999986533334443 4445555555445678888999999999


Q ss_pred             HHhhhh
Q 025660          241 IAFAFA  246 (249)
Q Consensus       241 ~a~a~~  246 (249)
                      +++++.
T Consensus       337 va~ai~  342 (436)
T PLN02166        337 LVDGLV  342 (436)
T ss_pred             HHHHHH
Confidence            999975

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.1e-32  Score=229.27  Aligned_cols=215  Identities=29%  Similarity=0.345  Sum_probs=169.5

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC-CE
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC-TG   85 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-d~   85 (249)
                      +||||||+||||++|+++|+++||+|++++|..        .....+.      ..+.++.+|+++.+...+..+.+ |.
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~   67 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLR--------DGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDA   67 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCC--------ccccccc------cccceeeecccchHHHHHHHhcCCCE
Confidence            499999999999999999999999999999986        2211111      35788999999998888888888 99


Q ss_pred             EEEccccCCCCCC---ChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCC-CCCchhHhhhc
Q 025660           86 VLHVATPVDFEDK---EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET-FWSDVDYIRKL  161 (249)
Q Consensus        86 vih~a~~~~~~~~---~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~-~~~~~~~~~~~  161 (249)
                      |||+|+.......   ++. .++..|+.++.++++++++.+ +++|||.||..+++.. ....+++|+ .+         
T Consensus        68 vih~aa~~~~~~~~~~~~~-~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~-~~~~~~~E~~~~---------  135 (314)
T COG0451          68 VIHLAAQSSVPDSNASDPA-EFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGD-PPPLPIDEDLGP---------  135 (314)
T ss_pred             EEEccccCchhhhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCC-CCCCCcccccCC---------
Confidence            9999998765222   222 689999999999999999977 8999998887766554 444477887 33         


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCc-cHHH-HHHHHcCCC-cccccccccccccchh
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAG-SVRS-SLALILGNV-KLKICCVMNRSHTLFV  238 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~-~~~~-~~~~~~~~~-~~~~~~~~~~~~~i~v  238 (249)
                      ..|.+.|+.||..+|..+..+...++++++++||+.||||+.....+. +... +.....+.+ .....++...++|+|+
T Consensus       136 ~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  215 (314)
T COG0451         136 PRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYV  215 (314)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeH
Confidence            234568999999999999999887799999999999999998765443 3333 334444555 3334577888899999


Q ss_pred             hHHHhhhhc
Q 025660          239 YAIAFAFAF  247 (249)
Q Consensus       239 ~d~a~a~~~  247 (249)
                      +|++.++.+
T Consensus       216 ~D~a~~~~~  224 (314)
T COG0451         216 DDVADALLL  224 (314)
T ss_pred             HHHHHHHHH
Confidence            999998754

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=3.2e-32  Score=239.19  Aligned_cols=222  Identities=19%  Similarity=0.201  Sum_probs=164.5

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+.|+|||||||||||++|+++|+++|++|++++|...       ...+.+.... ...+++++.+|+.++.     +.+
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~-------~~~~~~~~~~-~~~~~~~i~~D~~~~~-----l~~  183 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFT-------GRKENVMHHF-SNPNFELIRHDVVEPI-----LLE  183 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCc-------cchhhhhhhc-cCCceEEEECCccChh-----hcC
Confidence            35689999999999999999999999999999987641       0111111111 1135788899997763     457


Q ss_pred             CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +|+|||+|+....  ...++. ..+++|+.++.+|+++|++.+ . +||++||..+|+.. . ..+.+|+.+...++   
T Consensus       184 ~D~ViHlAa~~~~~~~~~~p~-~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~-~-~~p~~E~~~~~~~P---  255 (442)
T PLN02206        184 VDQIYHLACPASPVHYKFNPV-KTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP-L-QHPQVETYWGNVNP---  255 (442)
T ss_pred             CCEEEEeeeecchhhhhcCHH-HHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCC-C-CCCCCccccccCCC---
Confidence            9999999997543  223454 789999999999999999988 4 89999999876533 2 23566664322111   


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHH-HHHHHHcCCCcccccccccccccchhh
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR-SSLALILGNVKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~  239 (249)
                       ..+.+.|+.+|.++|.++..+.+.++++++++||+++|||+.......++. .+.+.+.+++...++++++.++|+|++
T Consensus       256 -~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~  334 (442)
T PLN02206        256 -IGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  334 (442)
T ss_pred             -CCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHH
Confidence             224678999999999999998887899999999999999985432233443 444445555555568888999999999


Q ss_pred             HHHhhhh
Q 025660          240 AIAFAFA  246 (249)
Q Consensus       240 d~a~a~~  246 (249)
                      |+|+++.
T Consensus       335 Dva~ai~  341 (442)
T PLN02206        335 DLVEGLM  341 (442)
T ss_pred             HHHHHHH
Confidence            9999975

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=4.5e-32  Score=232.02  Aligned_cols=227  Identities=19%  Similarity=0.150  Sum_probs=169.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++++||||||+||||++|+++|+++|++|++++|++...   .....+.+.. ......+++++.+|++|.+++.++++.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNF---NTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccc---cccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999875100   0011222211 111123588999999999999999884


Q ss_pred             --CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcc-----eEEEEcccceeeccCCCccccCCCCCC
Q 025660           83 --CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVK-----RVVYTSSNAAVFYNDKDVDMMDETFWS  153 (249)
Q Consensus        83 --~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (249)
                        +|+|||+|+....  ...++. ..+++|+.++.++++++++.+ ++     +||++||..+|+...   .+++|+.+.
T Consensus        82 ~~~d~Vih~A~~~~~~~~~~~~~-~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~---~~~~E~~~~  156 (340)
T PLN02653         82 IKPDEVYNLAAQSHVAVSFEMPD-YTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTP---PPQSETTPF  156 (340)
T ss_pred             cCCCEEEECCcccchhhhhhChh-HHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCC---CCCCCCCCC
Confidence              6999999997544  223343 677999999999999999876 43     899999998765432   267787763


Q ss_pred             chhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC-CCccHHHHHHHH-cCCCc-ccccccc
Q 025660          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-FAGSVRSSLALI-LGNVK-LKICCVM  230 (249)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~~~  230 (249)
                               .|.+.|+.||.++|.+++.++.+++++++..|+.++|||+.... .+..+..+...+ .+.+. +.+++++
T Consensus       157 ---------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  227 (340)
T PLN02653        157 ---------HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLD  227 (340)
T ss_pred             ---------CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCc
Confidence                     36788999999999999999888899999999999999975332 222233333333 34333 3448889


Q ss_pred             cccccchhhHHHhhhhc
Q 025660          231 NRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~~  247 (249)
                      +.++|+|++|+|.++..
T Consensus       228 ~~rd~i~v~D~a~a~~~  244 (340)
T PLN02653        228 ASRDWGFAGDYVEAMWL  244 (340)
T ss_pred             ceecceeHHHHHHHHHH
Confidence            99999999999999753

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=1.6e-31  Score=227.12  Aligned_cols=203  Identities=21%  Similarity=0.203  Sum_probs=160.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+||||||+||||++++++|+++|  ++|++++|+.        .....+..... ..++.++.+|++|++++.++++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~--------~~~~~~~~~~~-~~~~~~v~~Dl~d~~~l~~~~~   73 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDE--------LKQWEMQQKFP-APCLRFFIGDVRDKERLTRALR   73 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCCh--------hHHHHHHHHhC-CCcEEEEEccCCCHHHHHHHHh
Confidence            46799999999999999999999986  7899999876        22222211111 1368899999999999999999


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++|+|||+||....  ...++. .++++|+.|+.++++++.+.+ +++||++||....                      
T Consensus        74 ~iD~Vih~Ag~~~~~~~~~~~~-~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~~----------------------  129 (324)
T TIGR03589        74 GVDYVVHAAALKQVPAAEYNPF-ECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKAA----------------------  129 (324)
T ss_pred             cCCEEEECcccCCCchhhcCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCC----------------------
Confidence            99999999997543  233444 789999999999999999987 7899999995321                      


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHH---HcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-ccccccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAE---EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KLKICCVMNRSHT  235 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  235 (249)
                         .|.+.|+.||.++|.+++.++.   .++++++++|||+||||+.     .++..+.+....+. .+.+.++.+.++|
T Consensus       130 ---~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-----~~i~~~~~~~~~~~~~~~i~~~~~~r~~  201 (324)
T TIGR03589       130 ---NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-----SVVPFFKSLKEEGVTELPITDPRMTRFW  201 (324)
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-----CcHHHHHHHHHhCCCCeeeCCCCceEee
Confidence               1346799999999999987543   4689999999999999863     24556666655554 5666678888999


Q ss_pred             chhhHHHhhhhc
Q 025660          236 LFVYAIAFAFAF  247 (249)
Q Consensus       236 i~v~d~a~a~~~  247 (249)
                      +|++|+++++..
T Consensus       202 i~v~D~a~a~~~  213 (324)
T TIGR03589       202 ITLEQGVNFVLK  213 (324)
T ss_pred             EEHHHHHHHHHH
Confidence            999999999754

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.1e-31  Score=230.53  Aligned_cols=222  Identities=21%  Similarity=0.211  Sum_probs=163.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCe-EEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      |+|||||||||||++|+++|+++|++ |+++++...     . .....+..+. ...+++++.+|++|.+++.++++  +
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~-----~-~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   73 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTY-----A-GNLESLADVS-DSERYVFEHADICDRAELDRIFAQHQ   73 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCc-----c-chHHHHHhcc-cCCceEEEEecCCCHHHHHHHHHhcC
Confidence            37999999999999999999999976 555555320     0 1111121111 12357889999999999999997  4


Q ss_pred             CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhc--------CCcceEEEEcccceeeccCC--------Cc
Q 025660           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKS--------GTVKRVVYTSSNAAVFYNDK--------DV  144 (249)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~--------~~~~~~v~~SS~~~~~~~~~--------~~  144 (249)
                      +|+|||+||....  ...++ +.++++|+.|+.+++++|++.        +.+++||++||..+|+....        ..
T Consensus        74 ~d~vih~A~~~~~~~~~~~~-~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~  152 (352)
T PRK10084         74 PDAVMHLAAESHVDRSITGP-AAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEEL  152 (352)
T ss_pred             CCEEEECCcccCCcchhcCc-hhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccC
Confidence            8999999997543  12234 478999999999999999864        11569999999987654211        11


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHH-HHHHHcCCCc
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRS-SLALILGNVK  223 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~  223 (249)
                      ++++|+.+         ..|.+.|+.||.++|.+++.++..++++++++||+.||||+...  .+++.. +.....++..
T Consensus       153 ~~~~E~~~---------~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~  221 (352)
T PRK10084        153 PLFTETTA---------YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPL  221 (352)
T ss_pred             CCccccCC---------CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc--cchHHHHHHHHhcCCCe
Confidence            23556654         23678899999999999999988789999999999999998532  233433 3444444443


Q ss_pred             ccccccccccccchhhHHHhhhh
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~  246 (249)
                      ..++++++.++|+|++|+|+++.
T Consensus       222 ~~~~~g~~~~~~v~v~D~a~a~~  244 (352)
T PRK10084        222 PIYGKGDQIRDWLYVEDHARALY  244 (352)
T ss_pred             EEeCCCCeEEeeEEHHHHHHHHH
Confidence            44578899999999999999975

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=3.3e-31  Score=222.59  Aligned_cols=225  Identities=25%  Similarity=0.446  Sum_probs=164.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++||||||+||||++++++|+++|++|++++|+..     ..+....+..+.....+++++.+|++|.+++.+++.++
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~   79 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNG-----ETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGC   79 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCch-----hhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCC
Confidence            4578999999999999999999999999999998641     11111122222222346888999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeecc-C--CCccccCCCCCCchhHhhh
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYN-D--KDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~-~--~~~~~~~e~~~~~~~~~~~  160 (249)
                      |.|+|+++.......++ +.++++|+.++.++++++.+...+++||++||..+++.. .  ....+++|+.|.+..+.. 
T Consensus        80 d~v~~~~~~~~~~~~~~-~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~-  157 (297)
T PLN02583         80 SGLFCCFDPPSDYPSYD-EKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCR-  157 (297)
T ss_pred             CEEEEeCccCCcccccH-HHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHh-
Confidence            99999886543322233 478999999999999999886337899999998776432 1  233467888775544322 


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhH
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                        .+...|+.||..+|+++..+.+..+++++++||++||||+.....+        .+.+....   .+...+.|+|++|
T Consensus       158 --~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~--------~~~~~~~~---~~~~~~~~v~V~D  224 (297)
T PLN02583        158 --KFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP--------YLKGAAQM---YENGVLVTVDVNF  224 (297)
T ss_pred             --hcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh--------hhcCCccc---CcccCcceEEHHH
Confidence              1233699999999999999887779999999999999997643211        12222111   1133567999999


Q ss_pred             HHhhhhcc
Q 025660          241 IAFAFAFN  248 (249)
Q Consensus       241 ~a~a~~~~  248 (249)
                      +|+++++.
T Consensus       225 va~a~~~a  232 (297)
T PLN02583        225 LVDAHIRA  232 (297)
T ss_pred             HHHHHHHH
Confidence            99998653

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=2.4e-31  Score=245.89  Aligned_cols=225  Identities=21%  Similarity=0.272  Sum_probs=167.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI-   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~-   80 (249)
                      +.|+|||||||||||++|+++|+++  +++|++++|...     . .....+.... ...+++++.+|++|.+.+.+++ 
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~-----~-~~~~~l~~~~-~~~~v~~~~~Dl~d~~~~~~~~~   77 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-----C-SNLKNLNPSK-SSPNFKFVKGDIASADLVNYLLI   77 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCc-----c-chhhhhhhcc-cCCCeEEEECCCCChHHHHHHHh
Confidence            4579999999999999999999998  689999987530     0 1111111111 1236889999999999888776 


Q ss_pred             -cCCCEEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCc-cccCCCCCCchh
Q 025660           81 -AGCTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDV-DMMDETFWSDVD  156 (249)
Q Consensus        81 -~~~d~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~-~~~~e~~~~~~~  156 (249)
                       .++|+|||+|+.....  ..++. .++++|+.+|.+|++++++.+.+++|||+||..+|+...... ...+|+.+.   
T Consensus        78 ~~~~D~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~---  153 (668)
T PLN02260         78 TEGIDTIMHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQL---  153 (668)
T ss_pred             hcCCCEEEECCCccCchhhhhCHH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCC---
Confidence             4799999999986542  23343 778999999999999999876578999999998765432211 123454442   


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc-ccccccccccc
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL-KICCVMNRSHT  235 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  235 (249)
                            .|.+.|+.+|..+|.++..+...++++++++||++||||+...  ..++..+......+..+ .++++.+.++|
T Consensus       154 ------~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~--~~~i~~~~~~a~~g~~i~i~g~g~~~r~~  225 (668)
T PLN02260        154 ------LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMQGKPLPIHGDGSNVRSY  225 (668)
T ss_pred             ------CCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc--ccHHHHHHHHHhCCCCeEEecCCCceEee
Confidence                  2567899999999999999988789999999999999998643  23444444444444444 44788889999


Q ss_pred             chhhHHHhhhhc
Q 025660          236 LFVYAIAFAFAF  247 (249)
Q Consensus       236 i~v~d~a~a~~~  247 (249)
                      +|++|+|+++..
T Consensus       226 ihV~Dva~a~~~  237 (668)
T PLN02260        226 LYCEDVAEAFEV  237 (668)
T ss_pred             EEHHHHHHHHHH
Confidence            999999999753

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=4.8e-31  Score=227.61  Aligned_cols=226  Identities=28%  Similarity=0.441  Sum_probs=163.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC------CCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG------ASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++|+||||||+||||++++++|+++|++|+++.|+.        +..+.+..+..      ...+++++.+|++|++++.
T Consensus        52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~--------~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~  123 (367)
T PLN02686         52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQ--------EDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLH  123 (367)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHH
Confidence            467999999999999999999999999999988875        33222222110      0125788999999999999


Q ss_pred             HHHcCCCEEEEccccCCCCC-CChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccc--eeecc-CCC-ccccCCCC
Q 025660           78 AAIAGCTGVLHVATPVDFED-KEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNA--AVFYN-DKD-VDMMDETF  151 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~-~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~--~~~~~-~~~-~~~~~e~~  151 (249)
                      ++++++|.|+|+|+...... ........++|+.++.++++++++. + +++||++||..  +|+.. ... +.+++|+.
T Consensus       124 ~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~  202 (367)
T PLN02686        124 EAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEES  202 (367)
T ss_pred             HHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCCCCCcccCCCC
Confidence            99999999999999764421 1111255678999999999999986 5 89999999974  33221 111 23467766


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccccccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMN  231 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (249)
                      +.+.+.   ...|.+.|+.||..+|.++..+...++++++++||++||||+.....+.   .+...+.+. ...++  +.
T Consensus       203 ~~~~~~---~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~---~~~~~~~g~-~~~~g--~g  273 (367)
T PLN02686        203 WSDESF---CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNST---ATIAYLKGA-QEMLA--DG  273 (367)
T ss_pred             CCChhh---cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCCh---hHHHHhcCC-CccCC--CC
Confidence            543221   2335678999999999999998887899999999999999985432221   223344443 22223  34


Q ss_pred             ccccchhhHHHhhhhc
Q 025660          232 RSHTLFVYAIAFAFAF  247 (249)
Q Consensus       232 ~~~~i~v~d~a~a~~~  247 (249)
                      .++|+||+|+|+|+..
T Consensus       274 ~~~~v~V~Dva~A~~~  289 (367)
T PLN02686        274 LLATADVERLAEAHVC  289 (367)
T ss_pred             CcCeEEHHHHHHHHHH
Confidence            5689999999999753

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.6e-31  Score=225.54  Aligned_cols=208  Identities=19%  Similarity=0.189  Sum_probs=148.6

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh---hh-HHHHHc--
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DG-FDAAIA--   81 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~---~~-~~~~~~--   81 (249)
                      |||||||||||++|+++|+++|++++++.|+..        .....         ..+..+|+.|.   ++ +..+++  
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~--------~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~   64 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK--------DGTKF---------VNLVDLDIADYMDKEDFLAQIMAGD   64 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCC--------cchHH---------HhhhhhhhhhhhhHHHHHHHHhccc
Confidence            899999999999999999999998777766541        10000         01223455543   33 233332  


Q ss_pred             ---CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           82 ---GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        82 ---~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                         ++|+|||+||.......+.. .+++.|+.++.+|+++|++.+ + +||++||..+|+.. . ..+++|+.+      
T Consensus        65 ~~~~~d~Vih~A~~~~~~~~~~~-~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~-~-~~~~~E~~~------  133 (308)
T PRK11150         65 DFGDIEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGR-T-DDFIEEREY------  133 (308)
T ss_pred             ccCCccEEEECceecCCcCCChH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcC-C-CCCCccCCC------
Confidence               58999999996544323443 678999999999999999987 5 69999999876543 2 235666654      


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHHH-HHcCCCcccc-cccccccc
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLA-LILGNVKLKI-CCVMNRSH  234 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~  234 (249)
                         ..|.+.|+.||..+|++++.+...++++++++||+++|||+....  .+.....+.. ...+.....+ ++++..++
T Consensus       134 ---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~  210 (308)
T PRK11150        134 ---EKPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRD  210 (308)
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeee
Confidence               235678999999999999999877899999999999999986432  2233333433 4444433223 55667899


Q ss_pred             cchhhHHHhhhh
Q 025660          235 TLFVYAIAFAFA  246 (249)
Q Consensus       235 ~i~v~d~a~a~~  246 (249)
                      |+|++|+|.++.
T Consensus       211 ~i~v~D~a~a~~  222 (308)
T PRK11150        211 FVYVGDVAAVNL  222 (308)
T ss_pred             eeeHHHHHHHHH
Confidence            999999999864

>PLN02240 UDP-glucose 4-epimerase

Probab=99.98  E-value=8.2e-31  Score=225.11  Aligned_cols=229  Identities=20%  Similarity=0.230  Sum_probs=169.1

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCC-CCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+.++++|||||||||||++|+++|+++|++|++++|...    +.......+.... ....++.++.+|+++++++.++
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~   76 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDN----SSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKV   76 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCc----chHHHHHHHHHhhcccCccceEEecCcCCHHHHHHH
Confidence            6777789999999999999999999999999999987541    0001111222111 1123578899999999999998


Q ss_pred             Hc--CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCch
Q 025660           80 IA--GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (249)
Q Consensus        80 ~~--~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (249)
                      ++  ++|.|||+|+....  ...++. ..+++|+.++.+|+++|++.+ +++||++||..+|+..  ...+++|+.+.+ 
T Consensus        77 ~~~~~~d~vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~--~~~~~~E~~~~~-  151 (352)
T PLN02240         77 FASTRFDAVIHFAGLKAVGESVAKPL-LYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQP--EEVPCTEEFPLS-  151 (352)
T ss_pred             HHhCCCCEEEEccccCCccccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCC--CCCCCCCCCCCC-
Confidence            86  58999999997543  223444 789999999999999999887 7899999998765422  345688887643 


Q ss_pred             hHhhhcCCCCchHHHHHHHHHHHHHHHHHH-cCCcEEEeecCeEeCCCCCCC--------CCccHHHHHHHHcCCC-ccc
Q 025660          156 DYIRKLDSWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNV-KLK  225 (249)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~-~~~  225 (249)
                              |.+.|+.||..+|.+++.+... .+++++++|++++||+.....        ...+...+.+...++. .+.
T Consensus       152 --------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (352)
T PLN02240        152 --------ATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELT  223 (352)
T ss_pred             --------CCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceE
Confidence                    5678999999999999988654 579999999999999753211        1123344444444433 222


Q ss_pred             -c------cccccccccchhhHHHhhhh
Q 025660          226 -I------CCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       226 -~------~~~~~~~~~i~v~d~a~a~~  246 (249)
                       +      .++.+.++|+|++|+|++++
T Consensus       224 ~~g~~~~~~~g~~~~~~i~v~D~a~a~~  251 (352)
T PLN02240        224 VFGNDYPTKDGTGVRDYIHVMDLADGHI  251 (352)
T ss_pred             EeCCCCCCCCCCEEEeeEEHHHHHHHHH
Confidence             2      36788899999999998753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.98  E-value=1.4e-30  Score=220.03  Aligned_cols=221  Identities=20%  Similarity=0.201  Sum_probs=164.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   82 (249)
                      +||||||||+||++++++|+++|  ++|++++|....      ...+.+..... ..+++++.+|++|++++.++++.  
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYA------GNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQ   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcc------hhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcC
Confidence            58999999999999999999987  789988774310      11111111111 13578899999999999999987  


Q ss_pred             CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +|+|||+|+....  ..+++. .++++|+.++.++++++.+.....++|++||..+|+.... ..+++|+.+.       
T Consensus        74 ~d~vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~-~~~~~e~~~~-------  144 (317)
T TIGR01181        74 PDAVVHFAAESHVDRSISGPA-AFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEK-GDAFTETTPL-------  144 (317)
T ss_pred             CCEEEEcccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCC-CCCcCCCCCC-------
Confidence            8999999997653  223343 7889999999999999998752248999999887654322 2256676653       


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc-cccccccccccchhh
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL-KICCVMNRSHTLFVY  239 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~  239 (249)
                        .|.+.|+.+|..+|.+++.+..+.+++++++||+.+|||.....  .++..+......+..+ .++++++.++|+|++
T Consensus       145 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (317)
T TIGR01181       145 --APSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVE  220 (317)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc--cHHHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence              25678999999999999998877899999999999999975432  3444444444444333 457788899999999


Q ss_pred             HHHhhhhc
Q 025660          240 AIAFAFAF  247 (249)
Q Consensus       240 d~a~a~~~  247 (249)
                      |+++++.+
T Consensus       221 D~a~~~~~  228 (317)
T TIGR01181       221 DHCRAIYL  228 (317)
T ss_pred             HHHHHHHH
Confidence            99999753

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.98  E-value=1.2e-30  Score=219.47  Aligned_cols=194  Identities=18%  Similarity=0.102  Sum_probs=151.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+||||||+||||++++++|+++| +|++++|..                        ..+.+|++|.+++.++++  ++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~------------------------~~~~~Dl~d~~~~~~~~~~~~~   55 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS------------------------TDYCGDFSNPEGVAETVRKIRP   55 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc------------------------ccccCCCCCHHHHHHHHHhcCC
Confidence            379999999999999999999999 798888865                        124689999999999998  58


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||||+....  ...++. ..+.+|+.++.+|+++|++.+ . ++||+||..+|++.  ...|++|+++.        
T Consensus        56 D~Vih~Aa~~~~~~~~~~~~-~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~--~~~p~~E~~~~--------  122 (299)
T PRK09987         56 DVIVNAAAHTAVDKAESEPE-FAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGT--GDIPWQETDAT--------  122 (299)
T ss_pred             CEEEECCccCCcchhhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCC--CCCCcCCCCCC--------
Confidence            999999998655  233444 778899999999999999988 4 89999999876443  23478888763        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccc-cc--cccccccchh
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI-CC--VMNRSHTLFV  238 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~v  238 (249)
                       .|.+.|+.||..+|++++.+.    .+.+++||+++|||+..    .++..+.+.+..++.+.+ ++  +.+.+++.++
T Consensus       123 -~P~~~Yg~sK~~~E~~~~~~~----~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~  193 (299)
T PRK09987        123 -APLNVYGETKLAGEKALQEHC----AKHLIFRTSWVYAGKGN----NFAKTMLRLAKEREELSVINDQFGAPTGAELLA  193 (299)
T ss_pred             -CCCCHHHHHHHHHHHHHHHhC----CCEEEEecceecCCCCC----CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHH
Confidence             467899999999999998753    46799999999999642    345556666655554433 44  5566677778


Q ss_pred             hHHHhhhh
Q 025660          239 YAIAFAFA  246 (249)
Q Consensus       239 ~d~a~a~~  246 (249)
                      +|+++++.
T Consensus       194 d~~~~~~~  201 (299)
T PRK09987        194 DCTAHAIR  201 (299)
T ss_pred             HHHHHHHH
Confidence            88777653

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=5e-31  Score=209.72  Aligned_cols=221  Identities=19%  Similarity=0.215  Sum_probs=174.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +.++|+||||.||||++||++|..+||+|++++.--        ...+...+.......++.+.-|+..+     ++..+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~f--------tg~k~n~~~~~~~~~fel~~hdv~~p-----l~~ev   92 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYF--------TGRKENLEHWIGHPNFELIRHDVVEP-----LLKEV   92 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEeccc--------ccchhhcchhccCcceeEEEeechhH-----HHHHh
Confidence            347999999999999999999999999999998753        11111111111122455555566555     78889


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |.|+|+|++.++  -..++. ..+..|+.++.+.+..|++.+  +||++.||+.+|+.  ....|..|+.|.+..+.   
T Consensus        93 D~IyhLAapasp~~y~~npv-ktIktN~igtln~lglakrv~--aR~l~aSTseVYgd--p~~hpq~e~ywg~vnpi---  164 (350)
T KOG1429|consen   93 DQIYHLAAPASPPHYKYNPV-KTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGD--PLVHPQVETYWGNVNPI---  164 (350)
T ss_pred             hhhhhhccCCCCcccccCcc-ceeeecchhhHHHHHHHHHhC--ceEEEeecccccCC--cccCCCccccccccCcC---
Confidence            999999998766  244555 889999999999999999998  89999999998655  33456777777665443   


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc-cccccccccccchhhH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL-KICCVMNRSHTLFVYA  240 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~d  240 (249)
                       .|+..|...|+.+|.++..|.++.|+.+.|.|+.+.|||...-...++++.|......+.++ .+++|.+.|.|.||.|
T Consensus       165 -gpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD  243 (350)
T KOG1429|consen  165 -GPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSD  243 (350)
T ss_pred             -CchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHH
Confidence             46889999999999999999999999999999999999998766677777776666555555 5699999999999999


Q ss_pred             HHhhhh
Q 025660          241 IAFAFA  246 (249)
Q Consensus       241 ~a~a~~  246 (249)
                      +++++.
T Consensus       244 ~Vegll  249 (350)
T KOG1429|consen  244 LVEGLL  249 (350)
T ss_pred             HHHHHH
Confidence            999874

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.97  E-value=1.1e-30  Score=220.03  Aligned_cols=203  Identities=17%  Similarity=0.142  Sum_probs=153.9

Q ss_pred             EEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CCCEE
Q 025660            9 CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GCTGV   86 (249)
Q Consensus         9 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   86 (249)
                      ||||||||||++|++.|+++|++|+++.+..                           .+|+++.+++.++++  ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~---------------------------~~Dl~~~~~l~~~~~~~~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK---------------------------ELDLTRQADVEAFFAKEKPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc---------------------------cCCCCCHHHHHHHHhccCCCEE
Confidence            6999999999999999999999887654332                           489999999999887  47999


Q ss_pred             EEccccCCC---CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           87 LHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        87 ih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      ||||+....   ...++. .+++.|+.++.+|+++|++.+ +++||++||..+|+..  ...+++|+++.+.     ...
T Consensus        54 ih~A~~~~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~--~~~~~~E~~~~~~-----~~~  124 (306)
T PLN02725         54 ILAAAKVGGIHANMTYPA-DFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKF--APQPIPETALLTG-----PPE  124 (306)
T ss_pred             EEeeeeecccchhhhCcH-HHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCC--CCCCCCHHHhccC-----CCC
Confidence            999997542   223444 788999999999999999988 8899999999876533  2456788764221     122


Q ss_pred             CCc-hHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHH----HHHHHcCCCcc-c-ccccccccc
Q 025660          164 WGK-SYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRS----SLALILGNVKL-K-ICCVMNRSH  234 (249)
Q Consensus       164 ~~~-~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~----~~~~~~~~~~~-~-~~~~~~~~~  234 (249)
                      |.+ .|+.||.++|++++.+.+.++++++++||+.+|||+....  ...++..    +......+.++ . ++.+.+.++
T Consensus       125 p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        125 PTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            333 5999999999999988887899999999999999985321  1122222    22222333333 2 567888999


Q ss_pred             cchhhHHHhhhhc
Q 025660          235 TLFVYAIAFAFAF  247 (249)
Q Consensus       235 ~i~v~d~a~a~~~  247 (249)
                      |+|++|+++++.+
T Consensus       205 ~i~v~Dv~~~~~~  217 (306)
T PLN02725        205 FLHVDDLADAVVF  217 (306)
T ss_pred             cccHHHHHHHHHH
Confidence            9999999999754

>PLN02996 fatty acyl-CoA reductase

Probab=99.97  E-value=2.3e-30  Score=230.21  Aligned_cols=236  Identities=19%  Similarity=0.220  Sum_probs=163.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhh-hhc----------cCCCC-----CCCeE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLS-FLK----------NLPGA-----SERLR   64 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~-~l~----------~~~~~-----~~~~~   64 (249)
                      ++++|||||||||||++|+++|++.+.   +|+++.|....  ....++.. .+.          ..+..     ..+++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~--~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDA--KSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCC--CCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            468999999999999999999998753   67999997620  01111111 110          00000     15789


Q ss_pred             EEEcCCCC-------hhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccccee
Q 025660           65 IFHADLSH-------PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAV  137 (249)
Q Consensus        65 ~~~~Dl~~-------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~  137 (249)
                      ++.+|+++       .+.+.++++++|+|||+||..... .++ +..+.+|+.||.+|+++|++.+.+++|||+||..+|
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~-~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy  165 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERY-DVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC  165 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence            99999984       455778888999999999987653 233 488999999999999999986437899999999987


Q ss_pred             eccCC--CccccCCCC-C-----Cchh---------------------Hh----------h-hcCCCCchHHHHHHHHHH
Q 025660          138 FYNDK--DVDMMDETF-W-----SDVD---------------------YI----------R-KLDSWGKSYAISKTLTER  177 (249)
Q Consensus       138 ~~~~~--~~~~~~e~~-~-----~~~~---------------------~~----------~-~~~~~~~~Y~~sK~~~e~  177 (249)
                      +...+  ...++++.. +     .+.+                     ..          . .+..+.+.|+.||.++|.
T Consensus       166 G~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~  245 (491)
T PLN02996        166 GEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEM  245 (491)
T ss_pred             cCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHH
Confidence            54322  111111110 0     0110                     00          0 023456789999999999


Q ss_pred             HHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccH-------HHHHHHHcCCCcccccccccccccchhhHHHhhhh
Q 025660          178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSV-------RSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       178 ~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~  246 (249)
                      ++..+..  +++++++||++|+||+..+. ++.+       ..+.....|.....++++++.+||+||+|+|.|+.
T Consensus       246 lv~~~~~--~lpv~i~RP~~V~G~~~~p~-~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l  318 (491)
T PLN02996        246 LLGNFKE--NLPLVIIRPTMITSTYKEPF-PGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMI  318 (491)
T ss_pred             HHHHhcC--CCCEEEECCCEeccCCcCCC-CCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHH
Confidence            9988753  89999999999999987653 2221       23333344444556789999999999999999864

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.97  E-value=1.3e-29  Score=215.42  Aligned_cols=216  Identities=33%  Similarity=0.426  Sum_probs=165.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+||||||+||||++++++|+++|++|++++|++        +....+.     ..+++++.+|++|.+++.++++++|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~-----~~~~~~~~~D~~~~~~l~~~~~~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPT--------SDRRNLE-----GLDVEIVEGDLRDPASLRKAVAGCRA   67 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecC--------ccccccc-----cCCceEEEeeCCCHHHHHHHHhCCCE
Confidence            3799999999999999999999999999999986        2221111     12578899999999999999999999


Q ss_pred             EEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCC
Q 025660           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (249)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (249)
                      |||+|+.......++. ..+++|+.++.++++++.+.+ +++||++||..+|+.. ....+.+|+.+..+.      .+.
T Consensus        68 vi~~a~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~-~~~~~~~e~~~~~~~------~~~  138 (328)
T TIGR03466        68 LFHVAADYRLWAPDPE-EMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVR-GDGTPADETTPSSLD------DMI  138 (328)
T ss_pred             EEEeceecccCCCCHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcC-CCCCCcCccCCCCcc------ccc
Confidence            9999987544334444 789999999999999999987 8899999999876542 233467777654311      124


Q ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhhh
Q 025660          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAF  245 (249)
Q Consensus       166 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~  245 (249)
                      +.|+.+|.++|++++.+...++++++++||+.+|||+..... .....+.....+..+..   .+...+|+|++|+|+++
T Consensus       139 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~i~v~D~a~a~  214 (328)
T TIGR03466       139 GHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPT-PTGRIIVDFLNGKMPAY---VDTGLNLVHVDDVAEGH  214 (328)
T ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCC-cHHHHHHHHHcCCCcee---eCCCcceEEHHHHHHHH
Confidence            579999999999999998878999999999999999864321 11223444444433221   23446899999999987


Q ss_pred             hc
Q 025660          246 AF  247 (249)
Q Consensus       246 ~~  247 (249)
                      ..
T Consensus       215 ~~  216 (328)
T TIGR03466       215 LL  216 (328)
T ss_pred             HH
Confidence            53

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.97  E-value=2.6e-29  Score=214.71  Aligned_cols=223  Identities=18%  Similarity=0.183  Sum_probs=163.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+||||||+||||++++++|+++|++|++++|...    +.......+....  ..+..++.+|++|++++.++++  ++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~   74 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCN----SKRSVLPVIERLG--GKHPTFVEGDIRNEALLTEILHDHAI   74 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCC----chHhHHHHHHHhc--CCCceEEEccCCCHHHHHHHHhcCCC
Confidence            37999999999999999999999999999987541    0011111122211  1246788999999999999886  58


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+....  ...++. ..+.+|+.++.+|+++|++.+ +++||++||..+|+..  ...+++|+++..       
T Consensus        75 d~vvh~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~--~~~~~~E~~~~~-------  143 (338)
T PRK10675         75 DTVIHFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQ--PKIPYVESFPTG-------  143 (338)
T ss_pred             CEEEECCccccccchhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCC--CCCccccccCCC-------
Confidence            999999987543  122333 788999999999999999988 8899999998866432  234677776531       


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHc-CCcEEEeecCeEeCCCCCCC--------CCccHHHHHHHHcCCC-ccc------
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNV-KLK------  225 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~-~~~------  225 (249)
                       .|.+.|+.+|..+|++++.+++.+ +++++++|++.+|||.....        ...+...+.+...++. .+.      
T Consensus       144 -~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (338)
T PRK10675        144 -TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcC
Confidence             356789999999999999987654 79999999999999853211        1223445555555443 221      


Q ss_pred             -ccccccccccchhhHHHhhhh
Q 025660          226 -ICCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       226 -~~~~~~~~~~i~v~d~a~a~~  246 (249)
                       ...+.+.++|+|++|+|+++.
T Consensus       223 ~~~~g~~~~~~v~v~D~a~~~~  244 (338)
T PRK10675        223 PTEDGTGVRDYIHVMDLADGHV  244 (338)
T ss_pred             CCCCCcEEEeeEEHHHHHHHHH
Confidence             125678899999999998764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.97  E-value=3.8e-30  Score=210.90  Aligned_cols=225  Identities=23%  Similarity=0.287  Sum_probs=134.2

Q ss_pred             EeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhh-ccCCC----------CCCCeEEEEcCCCCh---
Q 025660           10 VTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFL-KNLPG----------ASERLRIFHADLSHP---   73 (249)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l-~~~~~----------~~~~~~~~~~Dl~~~---   73 (249)
                      |||||||+|++|+++|++++.  +|+++.|...     ..+..+.+ ..+..          ...+++++.||++++   
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~-----~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG   75 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASS-----SQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG   75 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSS-----HHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcc-----cccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence            799999999999999999987  8999999861     11222222 11110          146899999999986   


Q ss_pred             ---hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCC
Q 025660           74 ---DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        74 ---~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                         +.+.++.+++|+||||||..++..  +.+...+.|+.||++|++.|.+.+ .++|+|+||+.+ ... .. ...+|.
T Consensus        76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~--~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v-~~~-~~-~~~~~~  149 (249)
T PF07993_consen   76 LSDEDYQELAEEVDVIIHCAASVNFNA--PYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYV-AGS-RP-GTIEEK  149 (249)
T ss_dssp             --HHHHHHHHHH--EEEE--SS-SBS---S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGG-TTS--T-TT--SS
T ss_pred             CChHHhhccccccceeeecchhhhhcc--cchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccc-cCC-CC-Cccccc
Confidence               578888889999999999988732  344688999999999999999776 569999999433 222 11 112111


Q ss_pred             CC-CchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC--Cc-cHHHHHHHHcCCC-ccc
Q 025660          151 FW-SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AG-SVRSSLALILGNV-KLK  225 (249)
Q Consensus       151 ~~-~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~--~~-~~~~~~~~~~~~~-~~~  225 (249)
                      .. ...+.......+.+.|..||+.+|+++....++.|++++++|||.|+|....+..  .. +...+......+. +..
T Consensus       150 ~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~  229 (249)
T PF07993_consen  150 VYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDL  229 (249)
T ss_dssp             S-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-
T ss_pred             ccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccc
Confidence            10 0000111223456799999999999999998877999999999999995444332  22 3445555554444 333


Q ss_pred             ccccccccccchhhHHHhhh
Q 025660          226 ICCVMNRSHTLFVYAIAFAF  245 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~  245 (249)
                      ....+...|+++||.+|+++
T Consensus       230 ~~~~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  230 PGDPDARLDLVPVDYVARAI  249 (249)
T ss_dssp             SB---TT--EEEHHHHHHHH
T ss_pred             cCCCCceEeEECHHHHHhhC
Confidence            45556678999999999885

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=1.5e-29  Score=212.31  Aligned_cols=221  Identities=26%  Similarity=0.330  Sum_probs=171.9

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCC-CCCCeEEEEcCCCChhhHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      +++.+++||||+||+|++|+++|++++  .+|++++..+.        ......+... ....++.+.+|+.+..++..+
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~--------~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a   73 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPT--------QSNLPAELTGFRSGRVTVILGDLLDANSISNA   73 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcc--------ccccchhhhcccCCceeEEecchhhhhhhhhh
Confidence            367799999999999999999999998  79999988762        1111111110 245789999999999999999


Q ss_pred             HcCCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           80 IAGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                      ++++ .|+|||+...+  ...+.. ..+++|+.||++++++|++.+ ++++||+||..++.++.. ...-+|+.|..   
T Consensus        74 ~~~~-~Vvh~aa~~~~~~~~~~~~-~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~-~~n~~E~~p~p---  146 (361)
T KOG1430|consen   74 FQGA-VVVHCAASPVPDFVENDRD-LAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEP-IINGDESLPYP---  146 (361)
T ss_pred             ccCc-eEEEeccccCccccccchh-hheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCee-cccCCCCCCCc---
Confidence            9999 88888886544  222343 899999999999999999999 999999999998766533 34455555433   


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-cccccccccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KLKICCVMNRSHTL  236 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i  236 (249)
                          ..+...|+.||..+|.++++.+...++..+++||..||||++....    ..+...++.+. ....+.++...||+
T Consensus       147 ----~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~----~~i~~~~~~g~~~f~~g~~~~~~~~~  218 (361)
T KOG1430|consen  147 ----LKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLL----PKIVEALKNGGFLFKIGDGENLNDFT  218 (361)
T ss_pred             ----cccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcccc----HHHHHHHHccCceEEeeccccccceE
Confidence                1234579999999999999987545799999999999999986543    35555556555 44667778888999


Q ss_pred             hhhHHHhhhh
Q 025660          237 FVYAIAFAFA  246 (249)
Q Consensus       237 ~v~d~a~a~~  246 (249)
                      |++.++.|.+
T Consensus       219 ~~~Nva~ahi  228 (361)
T KOG1430|consen  219 YGENVAWAHI  228 (361)
T ss_pred             EechhHHHHH
Confidence            9999888764

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.4e-29  Score=201.55  Aligned_cols=221  Identities=23%  Similarity=0.258  Sum_probs=171.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+++|||||+||||+..+..++.+-  +..+.++.-..    -+ . .+.+++. ....+..++.+|+.+...+..++. 
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~----~s-~-~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDY----CS-N-LKNLEPV-RNSPNYKFVEGDIADADLVLYLFET   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccc----cc-c-cchhhhh-ccCCCceEeeccccchHHHHhhhcc
Confidence            4789999999999999999999874  45555544220    00 1 2222222 123478999999999998888876 


Q ss_pred             -CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           82 -GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        82 -~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                       .+|.|+|.|+.++.  +..++. .....|+.+|..|++.++..+.+++|||+||..+|+..... ....|.+.      
T Consensus        79 ~~id~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~-~~~~E~s~------  150 (331)
T KOG0747|consen   79 EEIDTVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDED-AVVGEASL------  150 (331)
T ss_pred             CchhhhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccc-cccccccc------
Confidence             58999999998776  556777 88999999999999999998669999999999988766442 22336654      


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHc-CCCcccccccccccccch
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL-GNVKLKICCVMNRSHTLF  237 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~  237 (249)
                         ..|.++|++||+++|..+++|...++++++++|-++||||+..+.  ..+..|..... +++...-++|.+.|.|+|
T Consensus       151 ---~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~--klipkFi~l~~~~~~~~i~g~g~~~rs~l~  225 (331)
T KOG0747|consen  151 ---LNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE--KLIPKFIKLAMRGKEYPIHGDGLQTRSYLY  225 (331)
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH--HHhHHHHHHHHhCCCcceecCcccceeeEe
Confidence               457899999999999999999999999999999999999987653  33334445333 444444489999999999


Q ss_pred             hhHHHhhh
Q 025660          238 VYAIAFAF  245 (249)
Q Consensus       238 v~d~a~a~  245 (249)
                      ++|+++|+
T Consensus       226 veD~~ea~  233 (331)
T KOG0747|consen  226 VEDVSEAF  233 (331)
T ss_pred             HHHHHHHH
Confidence            99999997

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.97  E-value=8.4e-29  Score=209.31  Aligned_cols=212  Identities=18%  Similarity=0.143  Sum_probs=154.4

Q ss_pred             EEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc----C
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----G   82 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~   82 (249)
                      |||||||||||++++++|.++|+ +|++++|..        ... .+.+.     ....+.+|+.+.+.++.+.+    +
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~--------~~~-~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~   66 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR--------DGH-KFLNL-----ADLVIADYIDKEDFLDRLEKGAFGK   66 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC--------Cch-hhhhh-----hheeeeccCcchhHHHHHHhhccCC
Confidence            69999999999999999999997 788887765        111 11111     11356788988888877764    7


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|+|||+|+.......++. ..+++|+.++.+++++|++.+ . +||++||..+|+...   .+++|+++.        .
T Consensus        67 ~D~vvh~A~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~---~~~~e~~~~--------~  132 (314)
T TIGR02197        67 IEAIFHQGACSDTTETDGE-YMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGE---AGFREGREL--------E  132 (314)
T ss_pred             CCEEEECccccCccccchH-HHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCC---CCcccccCc--------C
Confidence            9999999997655444554 788999999999999999987 5 899999998765432   234454431        2


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHH--cCCcEEEeecCeEeCCCCCCC--CCccHHHHH-HHHcCCCccc------cccccc
Q 025660          163 SWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPFICPK--FAGSVRSSL-ALILGNVKLK------ICCVMN  231 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~-~~~~~~~~~~------~~~~~~  231 (249)
                      .|.+.|+.||..+|.+++++...  .+++++++||+.+|||+....  ...++..+. ....+.....      ++.+++
T Consensus       133 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (314)
T TIGR02197       133 RPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQ  212 (314)
T ss_pred             CCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCc
Confidence            35678999999999999875422  368999999999999986432  223333333 4444443322      246778


Q ss_pred             ccccchhhHHHhhhhc
Q 025660          232 RSHTLFVYAIAFAFAF  247 (249)
Q Consensus       232 ~~~~i~v~d~a~a~~~  247 (249)
                      .++|+|++|+++++..
T Consensus       213 ~~~~i~v~D~a~~i~~  228 (314)
T TIGR02197       213 LRDFVYVKDVVDVNLW  228 (314)
T ss_pred             eeeeEEHHHHHHHHHH
Confidence            8999999999999753

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=2e-29  Score=204.89  Aligned_cols=225  Identities=20%  Similarity=0.216  Sum_probs=176.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      .++||||||.||||++.+-+|+++|++|++++.-..    ......+.++.+.....++.++.+|+.|.+.++++++  .
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n----~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~   77 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNN----SYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVK   77 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccc----cchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcC
Confidence            468999999999999999999999999999986431    1123444444444445689999999999999999998  5


Q ss_pred             CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +|.|+|.|+....  +..++. .+..+|+.||.+|++.|++.+ ++.+|+.||+.+|+.+.  ..|++|+.|.+      
T Consensus        78 fd~V~Hfa~~~~vgeS~~~p~-~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~--~ip~te~~~t~------  147 (343)
T KOG1371|consen   78 FDAVMHFAALAAVGESMENPL-SYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPT--KVPITEEDPTD------  147 (343)
T ss_pred             CceEEeehhhhccchhhhCch-hheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcc--eeeccCcCCCC------
Confidence            8999999998654  667787 899999999999999999999 99999999999876543  37899998754      


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeC--CCCCCC------CCccHHHHHHHHc--------CCCcc
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVG--PFICPK------FAGSVRSSLALIL--------GNVKL  224 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g--~~~~~~------~~~~~~~~~~~~~--------~~~~~  224 (249)
                        .|.++|+.+|...|.++..+...+++.++.+|.++++|  |.-...      ..+....+.....        .+...
T Consensus       148 --~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~  225 (343)
T KOG1371|consen  148 --QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDY  225 (343)
T ss_pred             --CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcc
Confidence              36789999999999999999988899999999999999  432221      1112212222211        22344


Q ss_pred             cccccccccccchhhHHHhhh
Q 025660          225 KICCVMNRSHTLFVYAIAFAF  245 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~  245 (249)
                      ...+|+..+++||+-|.|.+.
T Consensus       226 ~t~dgt~vrdyi~v~Dla~~h  246 (343)
T KOG1371|consen  226 TTIDGTIVRDYIHVLDLADGH  246 (343)
T ss_pred             cccCCCeeecceeeEehHHHH
Confidence            445678999999999988774

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.96  E-value=4.4e-29  Score=204.02  Aligned_cols=199  Identities=18%  Similarity=0.157  Sum_probs=153.7

Q ss_pred             EEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCC---CCCCCe----EEEEcCCCChhhHHHH
Q 025660            8 VCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLP---GASERL----RIFHADLSHPDGFDAA   79 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~---~~~~~~----~~~~~Dl~~~~~~~~~   79 (249)
                      ||||||+|.||+.||++|++.+ .++++++|++        ...-.++...   ....++    ..+.+|++|.+.+.++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E--------~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~   72 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDE--------NKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI   72 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-H--------HHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCCh--------hHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH
Confidence            7999999999999999999998 5899999997        4444443221   111233    3468999999999999


Q ss_pred             Hc--CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCch
Q 025660           80 IA--GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (249)
Q Consensus        80 ~~--~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (249)
                      ++  ++|+|+|.||.-+.  .+.++. +.+++|+.||++++++|.+.+ +++||++||-.++                  
T Consensus        73 ~~~~~pdiVfHaAA~KhVpl~E~~p~-eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv------------------  132 (293)
T PF02719_consen   73 FEEYKPDIVFHAAALKHVPLMEDNPF-EAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAV------------------  132 (293)
T ss_dssp             TT--T-SEEEE------HHHHCCCHH-HHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCS------------------
T ss_pred             HhhcCCCEEEEChhcCCCChHHhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccC------------------
Confidence            99  79999999998655  566777 899999999999999999999 9999999997762                  


Q ss_pred             hHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccc
Q 025660          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNR  232 (249)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (249)
                             +|.|.||.||+.+|.++..++...   +.++++||.|+|.|..     .+++..|.+.+..+.++.+.+.+..
T Consensus       133 -------~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-----GSVip~F~~Qi~~g~PlTvT~p~mt  200 (293)
T PF02719_consen  133 -------NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-----GSVIPLFKKQIKNGGPLTVTDPDMT  200 (293)
T ss_dssp             -------S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-----TSCHHHHHHHHHTTSSEEECETT-E
T ss_pred             -------CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-----CcHHHHHHHHHHcCCcceeCCCCcE
Confidence                   246889999999999999987755   5899999999999964     3577899999999999999999999


Q ss_pred             cccchhhHHHhhhh
Q 025660          233 SHTLFVYAIAFAFA  246 (249)
Q Consensus       233 ~~~i~v~d~a~a~~  246 (249)
                      |=|+.+++++..+.
T Consensus       201 Rffmti~EAv~Lvl  214 (293)
T PF02719_consen  201 RFFMTIEEAVQLVL  214 (293)
T ss_dssp             EEEE-HHHHHHHHH
T ss_pred             EEEecHHHHHHHHH
Confidence            99999999988754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.96  E-value=5.8e-28  Score=201.79  Aligned_cols=191  Identities=19%  Similarity=0.195  Sum_probs=149.1

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC--C
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC--T   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d   84 (249)
                      +|||||||||||++++++|+++|++|++++|+                            .+|+.+++++.++++++  |
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------------~~d~~~~~~~~~~~~~~~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------------QLDLTDPEALERLLRAIRPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------------ccCCCCHHHHHHHHHhCCCC
Confidence            58999999999999999999999999998774                            37999999999999864  9


Q ss_pred             EEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           85 GVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        85 ~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|||+|+.....  ...+. ..+++|+.++.++++++++.+ . +||++||..+|...  ...+++|+++.         
T Consensus        53 ~vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~--~~~~~~E~~~~---------  118 (287)
T TIGR01214        53 AVVNTAAYTDVDGAESDPE-KAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGE--GKRPYREDDAT---------  118 (287)
T ss_pred             EEEECCccccccccccCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCC--CCCCCCCCCCC---------
Confidence            999999975442  12333 678999999999999999887 4 89999998876432  34467787753         


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                      .|.+.|+.+|..+|..++.+    +.+++++||+.+|||....   .+...+......+..+.+. +++.++|+|++|+|
T Consensus       119 ~~~~~Y~~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~Dva  190 (287)
T TIGR01214       119 NPLNVYGQSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGR---NFVRTMLRLAGRGEELRVV-DDQIGSPTYAKDLA  190 (287)
T ss_pred             CCcchhhHHHHHHHHHHHHh----CCCeEEEEeeecccCCCCC---CHHHHHHHHhhcCCCceEe-cCCCcCCcCHHHHH
Confidence            25678999999999998774    6799999999999998422   2333444444444444332 24678999999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      +++..
T Consensus       191 ~a~~~  195 (287)
T TIGR01214       191 RVIAA  195 (287)
T ss_pred             HHHHH
Confidence            98753

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.96  E-value=1.1e-27  Score=203.33  Aligned_cols=219  Identities=22%  Similarity=0.216  Sum_probs=161.5

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GCT   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   84 (249)
                      +||||||||+||++++++|+++|++|++++|...       .....+...... .+++.+.+|+++++++.++++  ++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSN-------GSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEEHKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCc-------cchhhhhhhccc-cceEEEECCCCCHHHHHHHHHhCCCc
Confidence            5899999999999999999999999998876441       111111111111 157788999999999999987  699


Q ss_pred             EEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           85 GVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        85 ~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|||+||....  ...++. ..+..|+.++.++++++.+.+ +++||++||..+|+. . ...+++|+.+..        
T Consensus        73 ~vv~~ag~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~-~-~~~~~~e~~~~~--------  140 (328)
T TIGR01179        73 AVIHFAGLIAVGESVQDPL-KYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGE-P-SSIPISEDSPLG--------  140 (328)
T ss_pred             EEEECccccCcchhhcCch-hhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCC-C-CCCCccccCCCC--------
Confidence            99999997543  222333 678899999999999999887 789999999876532 2 233577776532        


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHH-cCCcEEEeecCeEeCCCCCCC-------CCccHHHHHHHHcCC-Ccc-------cc
Q 025660          163 SWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFICPK-------FAGSVRSSLALILGN-VKL-------KI  226 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~vrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~-~~~-------~~  226 (249)
                       |.+.|+.+|..+|.++..++.+ .+++++++||+.+|||...+.       ...++..+.....+. ..+       +.
T Consensus       141 -~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (328)
T TIGR01179       141 -PINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPT  219 (328)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccC
Confidence             5678999999999999998776 689999999999999964321       122334444444322 222       22


Q ss_pred             cccccccccchhhHHHhhhh
Q 025660          227 CCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~  246 (249)
                      ..+...++|+|++|+++++.
T Consensus       220 ~~g~~~~~~v~~~D~a~~~~  239 (328)
T TIGR01179       220 PDGTCVRDYIHVMDLADAHL  239 (328)
T ss_pred             CCCceEEeeeeHHHHHHHHH
Confidence            35667789999999999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.5e-27  Score=206.84  Aligned_cols=205  Identities=20%  Similarity=0.183  Sum_probs=172.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+|+||||||+|-||+.+|+++++.+. ++++++|++.     +....+ .+.+..+ ..++.++.||++|.+.+.++++
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~-----~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~  322 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEY-----KLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAME  322 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchH-----HHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHh
Confidence            568999999999999999999999975 8899999871     111111 1222211 4578899999999999999999


Q ss_pred             C--CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           82 G--CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        82 ~--~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                      +  +|+|+|+||.-+.  .+.+|. +.+++|+.||+|++++|.+.+ +++||.+||-.++.                   
T Consensus       323 ~~kvd~VfHAAA~KHVPl~E~nP~-Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV~-------------------  381 (588)
T COG1086         323 GHKVDIVFHAAALKHVPLVEYNPE-EAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAVN-------------------  381 (588)
T ss_pred             cCCCceEEEhhhhccCcchhcCHH-HHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcccC-------------------
Confidence            7  9999999998554  566776 999999999999999999999 99999999977632                   


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSH  234 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (249)
                            |-|.||.||+.+|.++.+++...   +.+++++|.|+|.|...     +++..|.+.++.+.++.+.+.+..|=
T Consensus       382 ------PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG-----SViPlFk~QI~~GgplTvTdp~mtRy  450 (588)
T COG1086         382 ------PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG-----SVIPLFKKQIAEGGPLTVTDPDMTRF  450 (588)
T ss_pred             ------CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC-----CCHHHHHHHHHcCCCccccCCCceeE
Confidence                  45789999999999999987743   38999999999999642     46779999999999999999999999


Q ss_pred             cchhhHHHhhhh
Q 025660          235 TLFVYAIAFAFA  246 (249)
Q Consensus       235 ~i~v~d~a~a~~  246 (249)
                      ||.+.+++..+.
T Consensus       451 fMTI~EAv~LVl  462 (588)
T COG1086         451 FMTIPEAVQLVL  462 (588)
T ss_pred             EEEHHHHHHHHH
Confidence            999999988764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.96  E-value=5e-28  Score=201.93  Aligned_cols=190  Identities=23%  Similarity=0.237  Sum_probs=144.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+||||||+|+||++|.+.|.++|++|+++.|.                            ..|++|.+++.++++  ++
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------------~~dl~d~~~~~~~~~~~~p   52 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------------------DLDLTDPEAVAKLLEAFKP   52 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------------CS-TTSHHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------------hcCCCCHHHHHHHHHHhCC
Confidence            589999999999999999999999999998665                            389999999999987  48


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+||||||....  .+.++. ..+.+|+.++.+|+++|.+.+  .++||+||..+|.+.  ...+++|++++        
T Consensus        53 d~Vin~aa~~~~~~ce~~p~-~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~--~~~~y~E~d~~--------  119 (286)
T PF04321_consen   53 DVVINCAAYTNVDACEKNPE-EAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGD--KGGPYTEDDPP--------  119 (286)
T ss_dssp             SEEEE------HHHHHHSHH-HHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SS--TSSSB-TTS----------
T ss_pred             CeEeccceeecHHhhhhChh-hhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCC--cccccccCCCC--------
Confidence            999999998665  234554 899999999999999999988  599999999876443  34568888763        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                       .|.+.||.+|..+|+.++...+    +..++|++.+||+.    ...++..+.+.+..++.+.... +..+..+|++|+
T Consensus       120 -~P~~~YG~~K~~~E~~v~~~~~----~~~IlR~~~~~g~~----~~~~~~~~~~~~~~~~~i~~~~-d~~~~p~~~~dl  189 (286)
T PF04321_consen  120 -NPLNVYGRSKLEGEQAVRAACP----NALILRTSWVYGPS----GRNFLRWLLRRLRQGEPIKLFD-DQYRSPTYVDDL  189 (286)
T ss_dssp             ---SSHHHHHHHHHHHHHHHH-S----SEEEEEE-SEESSS----SSSHHHHHHHHHHCTSEEEEES-SCEE--EEHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHhcC----CEEEEecceecccC----CCchhhhHHHHHhcCCeeEeeC-CceeCCEEHHHH
Confidence             4779999999999999988432    88999999999992    2357778888888887776544 677899999999


Q ss_pred             Hhhhh
Q 025660          242 AFAFA  246 (249)
Q Consensus       242 a~a~~  246 (249)
                      |+++.
T Consensus       190 A~~i~  194 (286)
T PF04321_consen  190 ARVIL  194 (286)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.95  E-value=3e-27  Score=200.35  Aligned_cols=187  Identities=19%  Similarity=0.212  Sum_probs=142.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+|||||||||||++++++|+++||+|++++|+.        ++...+..     .+++++.+|++|++++.++++++|+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~--------~~~~~l~~-----~~v~~v~~Dl~d~~~l~~al~g~d~   67 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNL--------RKASFLKE-----WGAELVYGDLSLPETLPPSFKGVTA   67 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCh--------HHhhhHhh-----cCCEEEECCCCCHHHHHHHHCCCCE
Confidence            3799999999999999999999999999999986        33222221     2578999999999999999999999


Q ss_pred             EEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCC
Q 025660           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (249)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (249)
                      |||+++...   .++. .+.++|+.++.+++++|++.+ +++||++||..+...                        +.
T Consensus        68 Vi~~~~~~~---~~~~-~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~------------------------~~  118 (317)
T CHL00194         68 IIDASTSRP---SDLY-NAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQY------------------------PY  118 (317)
T ss_pred             EEECCCCCC---CCcc-chhhhhHHHHHHHHHHHHHcC-CCEEEEecccccccc------------------------CC
Confidence            999986432   2232 567889999999999999998 999999999542100                        12


Q ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhhh
Q 025660          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAF  245 (249)
Q Consensus       166 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~  245 (249)
                      ..|..+|..+|..++.    ++++++++||+.+|+.....       ...... .+.+..+..+.+.++|+|++|+|+++
T Consensus       119 ~~~~~~K~~~e~~l~~----~~l~~tilRp~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~  186 (317)
T CHL00194        119 IPLMKLKSDIEQKLKK----SGIPYTIFRLAGFFQGLISQ-------YAIPIL-EKQPIWITNESTPISYIDTQDAAKFC  186 (317)
T ss_pred             ChHHHHHHHHHHHHHH----cCCCeEEEeecHHhhhhhhh-------hhhhhc-cCCceEecCCCCccCccCHHHHHHHH
Confidence            3588999999987754    68999999999887642211       111122 22334445567778999999999987


Q ss_pred             h
Q 025660          246 A  246 (249)
Q Consensus       246 ~  246 (249)
                      +
T Consensus       187 ~  187 (317)
T CHL00194        187 L  187 (317)
T ss_pred             H
Confidence            4

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.95  E-value=1.3e-26  Score=199.47  Aligned_cols=223  Identities=20%  Similarity=0.224  Sum_probs=153.4

Q ss_pred             eEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhc----c--CC--CCC-CCeEEEEcCCCCh--
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLK----N--LP--GAS-ERLRIFHADLSHP--   73 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~----~--~~--~~~-~~~~~~~~Dl~~~--   73 (249)
                      +|||||||||||++|+++|+++|  ++|+++.|+..     .....+.+.    .  +.  ... .+++++.+|++++  
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   75 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS-----EEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL   75 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC-----HHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence            58999999999999999999998  67999999861     111111111    0  00  001 4789999999864  


Q ss_pred             ----hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCC
Q 025660           74 ----DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        74 ----~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                          +.+..+.+++|+|||+|+.....  .+.+.....|+.++.++++++.+.+ .++|+++||..++.....  .+..|
T Consensus        76 gl~~~~~~~~~~~~d~vih~a~~~~~~--~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~--~~~~~  150 (367)
T TIGR01746        76 GLSDAEWERLAENVDTIVHNGALVNWV--YPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDL--STVTE  150 (367)
T ss_pred             CcCHHHHHHHHhhCCEEEeCCcEeccC--CcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCC--CCccc
Confidence                56777788899999999986642  2344778899999999999999987 778999999987654322  12333


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCC--ccH-HHHHHHHcCCCcccc
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA--GSV-RSSLALILGNVKLKI  226 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~--~~~-~~~~~~~~~~~~~~~  226 (249)
                      +.+....    ...+.+.|+.||+.+|.+++.+.. .|++++++|||.++|+...+...  .++ ..+......+   .+
T Consensus       151 ~~~~~~~----~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~---~~  222 (367)
T TIGR01746       151 DDAIVTP----PPGLAGGYAQSKWVAELLVREASD-RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG---AY  222 (367)
T ss_pred             ccccccc----ccccCCChHHHHHHHHHHHHHHHh-cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC---CC
Confidence            3322111    112356799999999999988766 49999999999999984433211  111 1222222222   12


Q ss_pred             ccccc-ccccchhhHHHhhhhc
Q 025660          227 CCVMN-RSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~-~~~~i~v~d~a~a~~~  247 (249)
                      +...+ ..+|+|++|+++++++
T Consensus       223 p~~~~~~~~~~~vddva~ai~~  244 (367)
T TIGR01746       223 PDSPELTEDLTPVDYVARAIVA  244 (367)
T ss_pred             CCCCccccCcccHHHHHHHHHH
Confidence            33333 5789999999998753

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.6e-26  Score=213.77  Aligned_cols=218  Identities=23%  Similarity=0.231  Sum_probs=152.3

Q ss_pred             CeEEEeccchhhHHHHHHHHH--HCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh------hhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLL--DHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP------DGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~------~~~~   77 (249)
                      |+|||||||||||++|+++|+  ++|++|++++|+..      ......+.... ...+++++.+|++|+      +.+.
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~------~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~   73 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS------LSRLEALAAYW-GADRVVPLVGDLTEPGLGLSEADIA   73 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch------HHHHHHHHHhc-CCCcEEEEecccCCccCCcCHHHHH
Confidence            379999999999999999999  57999999999651      11222221111 113688999999994      4566


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                      ++ +++|+||||||...... .. ....++|+.++.+++++|.+.+ +++|||+||..+++...+   +.+|+.+...  
T Consensus        74 ~l-~~~D~Vih~Aa~~~~~~-~~-~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~---~~~e~~~~~~--  144 (657)
T PRK07201         74 EL-GDIDHVVHLAAIYDLTA-DE-EAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEG---VFREDDFDEG--  144 (657)
T ss_pred             Hh-cCCCEEEECceeecCCC-CH-HHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccC---ccccccchhh--
Confidence            65 88999999999865532 23 3678999999999999999988 889999999987653322   3344432110  


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCC---c---cHHHHHHHHcCCCccc-ccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA---G---SVRSSLALILGNVKLK-ICCVM  230 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~---~---~~~~~~~~~~~~~~~~-~~~~~  230 (249)
                          ..+.+.|+.||..+|.++++   ..+++++++||++||||...+...   .   +...+.........+. +..+.
T Consensus       145 ----~~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (657)
T PRK07201        145 ----QGLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG  217 (657)
T ss_pred             ----cCCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence                12346799999999999875   258999999999999987543211   1   1112222211111222 24455


Q ss_pred             cccccchhhHHHhhhh
Q 025660          231 NRSHTLFVYAIAFAFA  246 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~  246 (249)
                      ...+++|++|++.++.
T Consensus       218 ~~~~~v~vddva~ai~  233 (657)
T PRK07201        218 GRTNIVPVDYVADALD  233 (657)
T ss_pred             CeeeeeeHHHHHHHHH
Confidence            6789999999999874

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=3.7e-26  Score=185.87  Aligned_cols=188  Identities=22%  Similarity=0.207  Sum_probs=157.6

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GCT   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   84 (249)
                      +|||||++|++|++|++.|. .+++|+.++|..                            .|++|++.+.+++.  ++|
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------------~Ditd~~~v~~~i~~~~PD   52 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------------LDITDPDAVLEVIRETRPD   52 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------------ccccChHHHHHHHHhhCCC
Confidence            49999999999999999998 679999998865                            89999999999998  479


Q ss_pred             EEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           85 GVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        85 ~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|||+|+.+..  .+.++. ..+.+|..++.+++++|.+.+  -++||+||-.++-+.  ...++.|+++.         
T Consensus        53 vVIn~AAyt~vD~aE~~~e-~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~--~~~~Y~E~D~~---------  118 (281)
T COG1091          53 VVINAAAYTAVDKAESEPE-LAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGE--KGGPYKETDTP---------  118 (281)
T ss_pred             EEEECccccccccccCCHH-HHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCC--CCCCCCCCCCC---------
Confidence            99999999877  344544 899999999999999999998  699999998764332  24578888764         


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                      .|.+.||.||.++|..++.+    +-+..++|.+++||...    ..|+..+++....++.+...+ ++....+++.|+|
T Consensus       119 ~P~nvYG~sKl~GE~~v~~~----~~~~~I~Rtswv~g~~g----~nFv~tml~la~~~~~l~vv~-Dq~gsPt~~~dlA  189 (281)
T COG1091         119 NPLNVYGRSKLAGEEAVRAA----GPRHLILRTSWVYGEYG----NNFVKTMLRLAKEGKELKVVD-DQYGSPTYTEDLA  189 (281)
T ss_pred             CChhhhhHHHHHHHHHHHHh----CCCEEEEEeeeeecCCC----CCHHHHHHHHhhcCCceEEEC-CeeeCCccHHHHH
Confidence            47899999999999999885    45789999999999864    457778888887777664433 6777899999999


Q ss_pred             hhhh
Q 025660          243 FAFA  246 (249)
Q Consensus       243 ~a~~  246 (249)
                      +++.
T Consensus       190 ~~i~  193 (281)
T COG1091         190 DAIL  193 (281)
T ss_pred             HHHH
Confidence            9874

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.94  E-value=1.6e-26  Score=192.21  Aligned_cols=224  Identities=21%  Similarity=0.198  Sum_probs=157.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCC--------CCCCCeEEEEcCCCCh---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLP--------GASERLRIFHADLSHP---   73 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~Dl~~~---   73 (249)
                      ++||+||||||+|.+|+.+|+.+-. +|+++.|..     ..+...++|+...        ...++++++.+|+.++   
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~-----s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lG   75 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQ-----SDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLG   75 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecC-----CHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCC
Confidence            4799999999999999999999865 999999976     2222333332221        2346899999999865   


Q ss_pred             ---hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCC-
Q 025660           74 ---DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDE-  149 (249)
Q Consensus        74 ---~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e-  149 (249)
                         ..+.++.+++|.|||+|+.+++  -.++......|+.||..+++.|...+ +|.+.|+||+++.........-.++ 
T Consensus        76 L~~~~~~~La~~vD~I~H~gA~Vn~--v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~  152 (382)
T COG3320          76 LSERTWQELAENVDLIIHNAALVNH--VFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFD  152 (382)
T ss_pred             CCHHHHHHHhhhcceEEecchhhcc--cCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCccccc
Confidence               5789999999999999999887  34455889999999999999999988 8899999999975443322221111 


Q ss_pred             -CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-ccccc
Q 025660          150 -TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KLKIC  227 (249)
Q Consensus       150 -~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~  227 (249)
                       .++...    .-..+.+.|+.||+.+|.+++...+ .|++++++|||.|.|+...+.++. ..++.++..+.. .-.++
T Consensus       153 ~~~~~~~----~~~~~~~GY~~SKwvaE~Lvr~A~~-rGLpv~I~Rpg~I~gds~tG~~n~-~D~~~Rlv~~~~~lg~~P  226 (382)
T COG3320         153 EISPTRN----VGQGLAGGYGRSKWVAEKLVREAGD-RGLPVTIFRPGYITGDSRTGALNT-RDFLTRLVLGLLQLGIAP  226 (382)
T ss_pred             ccccccc----ccCccCCCcchhHHHHHHHHHHHhh-cCCCeEEEecCeeeccCccCcccc-chHHHHHHHHHHHhCCCC
Confidence             122211    1123567899999999999999777 499999999999999987443221 112333333322 11334


Q ss_pred             ccccccccchhhHHHh
Q 025660          228 CVMNRSHTLFVYAIAF  243 (249)
Q Consensus       228 ~~~~~~~~i~v~d~a~  243 (249)
                      +.....+.+.++++++
T Consensus       227 ~~~~~~~~~p~~~v~~  242 (382)
T COG3320         227 DSEYSLDMLPVDHVAR  242 (382)
T ss_pred             CcccchhhCccceeeE
Confidence            4455555555444443

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=3.9e-26  Score=182.02  Aligned_cols=226  Identities=20%  Similarity=0.136  Sum_probs=181.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC-CCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|+.||||-||+-|++|++.|+++|++|+++.|+.   ...+..+. +|...+- ...+++++.+|++|...+.++++ 
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrs---s~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~   76 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRS---SSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEE   76 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeecc---ccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHh
Confidence            357899999999999999999999999999999985   11233333 4433332 33468999999999999999998 


Q ss_pred             -CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCC-cceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           82 -GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        82 -~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                       ++|.|+|+||+...  +.++|. .+.+++..||.+|+++++..+. ..+|...||...|+.  ....|.+|++|..   
T Consensus        77 v~PdEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~--v~~~pq~E~TPFy---  150 (345)
T COG1089          77 VQPDEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGL--VQEIPQKETTPFY---  150 (345)
T ss_pred             cCchhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcC--cccCccccCCCCC---
Confidence             47999999998765  667776 8899999999999999998763 358888888876543  3456889998844   


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHHHHHcCCC-cccccccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGNV-KLKICCVMNRSH  234 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  234 (249)
                            |+|+|+.+|..+-++...|.+.+|+..|.=+..+--+|.....  ...+...+.+...|.+ .+.+++-+..||
T Consensus       151 ------PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRD  224 (345)
T COG1089         151 ------PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRD  224 (345)
T ss_pred             ------CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecccccccc
Confidence                  8999999999999999999999999999988888888876543  2223344555555655 678899999999


Q ss_pred             cchhhHHHhhh
Q 025660          235 TLFVYAIAFAF  245 (249)
Q Consensus       235 ~i~v~d~a~a~  245 (249)
                      |-|+.|.++++
T Consensus       225 WG~A~DYVe~m  235 (345)
T COG1089         225 WGHAKDYVEAM  235 (345)
T ss_pred             ccchHHHHHHH
Confidence            99999999986

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.94  E-value=7.2e-26  Score=203.50  Aligned_cols=231  Identities=17%  Similarity=0.188  Sum_probs=159.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhhhhc-cC------------CC------CCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLK-NL------------PG------ASE   61 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~-~~------------~~------~~~   61 (249)
                      ++++|||||||||||++|+++|++.+.   +|+++.|...     .....+.+. ++            .+      ...
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~-----~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~  192 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKD-----KEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS  192 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCC-----chhHHHHHHHHHhhhhhHHHHHHhcCccccccccc
Confidence            468999999999999999999998764   6799999651     111111221 10            00      135


Q ss_pred             CeEEEEcCCCCh------hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           62 RLRIFHADLSHP------DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        62 ~~~~~~~Dl~~~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      ++.++.+|++++      +..+.+.+++|+|||+|+.....  ...+..+++|+.|+.+++++|++.+..++|||+||+.
T Consensus       193 Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~--~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay  270 (605)
T PLN02503        193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD--ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY  270 (605)
T ss_pred             cEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc--cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence            789999999997      45677778899999999987653  3344889999999999999998875478999999998


Q ss_pred             eeeccCCCccccCCCCCC----------------------chhH---------h---------h----------hcCCCC
Q 025660          136 AVFYNDKDVDMMDETFWS----------------------DVDY---------I---------R----------KLDSWG  165 (249)
Q Consensus       136 ~~~~~~~~~~~~~e~~~~----------------------~~~~---------~---------~----------~~~~~~  165 (249)
                      +++...+   .+.|....                      ++..         .         .          .+..+.
T Consensus       271 VyG~~~G---~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~p  347 (605)
T PLN02503        271 VNGQRQG---RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQ  347 (605)
T ss_pred             eecCCCC---eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCC
Confidence            7754422   22332211                      1000         0         0          124566


Q ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC---CCc---cHHHHHHHHcCCCcccccccccccccchhh
Q 025660          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK---FAG---SVRSSLALILGNVKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       166 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  239 (249)
                      |.|..||.++|.++++..  .+++++++||+.|.+....|.   ..+   ....+.....|.....+++++...|+|++|
T Consensus       348 NtYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD  425 (605)
T PLN02503        348 DTYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPAD  425 (605)
T ss_pred             ChHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeec
Confidence            899999999999999765  389999999999955333221   111   111222222333344557888899999999


Q ss_pred             HHHhhhh
Q 025660          240 AIAFAFA  246 (249)
Q Consensus       240 d~a~a~~  246 (249)
                      .++.++.
T Consensus       426 ~vvna~i  432 (605)
T PLN02503        426 MVVNATL  432 (605)
T ss_pred             HHHHHHH
Confidence            9998864

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.94  E-value=2e-25  Score=186.71  Aligned_cols=204  Identities=19%  Similarity=0.114  Sum_probs=136.6

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCEEE
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVL   87 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   87 (249)
                      |||||||||||++++++|+++|++|++++|+..        ....+..       ..  ..|+.. +...+.+.++|+||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~-------~~--~~~~~~-~~~~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPP--------AGANTKW-------EG--YKPWAP-LAESEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCC--------CCCcccc-------ee--eecccc-cchhhhcCCCCEEE
Confidence            689999999999999999999999999999872        2111110       01  112222 44556677899999


Q ss_pred             EccccCCCC---CCChHHHhhhhHHhHHHHHHHHHHhcCCc--ceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           88 HVATPVDFE---DKEPEEVITQRAINGTLGILKSCLKSGTV--KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        88 h~a~~~~~~---~~~~~~~~~~~n~~~t~~l~~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      |+|+.....   ..+..+.++++|+.+++++++++++.+ +  .+||+.||..+|+ . ....+++|+++..        
T Consensus        63 h~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg-~-~~~~~~~E~~~~~--------  131 (292)
T TIGR01777        63 NLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYG-T-SEDRVFTEEDSPA--------  131 (292)
T ss_pred             ECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeC-C-CCCCCcCcccCCC--------
Confidence            999975421   112223678899999999999999987 4  3566666655443 2 2234677776421        


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                       +...|+..+...|..+..+. +.+++++++||+.+|||...     ....+...........++++++.++|+|++|+|
T Consensus       132 -~~~~~~~~~~~~e~~~~~~~-~~~~~~~ilR~~~v~G~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva  204 (292)
T TIGR01777       132 -GDDFLAELCRDWEEAAQAAE-DLGTRVVLLRTGIVLGPKGG-----ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLV  204 (292)
T ss_pred             -CCChHHHHHHHHHHHhhhch-hcCCceEEEeeeeEECCCcc-----hhHHHHHHHhcCcccccCCCCcccccEeHHHHH
Confidence             23346666666677666543 36899999999999999642     111222222211112357788999999999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      +++..
T Consensus       205 ~~i~~  209 (292)
T TIGR01777       205 QLILF  209 (292)
T ss_pred             HHHHH
Confidence            99864

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.94  E-value=3.5e-26  Score=188.45  Aligned_cols=209  Identities=15%  Similarity=0.081  Sum_probs=146.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|++        +.... .+.+...+.++.++.+|++|.+++.++++ 
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   77 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQ--------DGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDK   77 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCh--------HHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999987        33322 22222223467889999999998887766 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhH----HHHHHHHH-HhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAING----TLGILKSC-LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~----t~~l~~~~-~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|+||||||.....     ..+..+..+++|+.+    ++++++.+ ++.+ .++||++||.......+    
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~~----  152 (262)
T PRK13394         78 VAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEASP----  152 (262)
T ss_pred             HHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCCC----
Confidence                  389999999975431     122234778899999    66677777 5555 78999999965432211    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC--
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG--  220 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~--  220 (249)
                                        +.+.|+.+|...+.+++.++.+   .+++++++|||.+++|......+..    ......  
T Consensus       153 ------------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~----~~~~~~~~  210 (262)
T PRK13394        153 ------------------LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQ----AKELGISE  210 (262)
T ss_pred             ------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhh----hhccCCCh
Confidence                              2356999999999888887765   4899999999999998643221110    000000  


Q ss_pred             CC-c-ccccccccccccchhhHHHhhhhc
Q 025660          221 NV-K-LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~-~-~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .. . ..+..+...++|++++|++.++.|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~dva~a~~~  239 (262)
T PRK13394        211 EEVVKKVMLGKTVDGVFTTVEDVAQTVLF  239 (262)
T ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence            00 0 012234556789999999998765

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.94  E-value=1.1e-25  Score=195.49  Aligned_cols=195  Identities=14%  Similarity=0.091  Sum_probs=145.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh---hccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF---LKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++++|||||||||||++++++|+++|++|++++|+.        .....   .........+++++.+|++|++++.+++
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~--------~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~  130 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREK--------SGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVL  130 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEech--------hhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHH
Confidence            467899999999999999999999999999999986        21110   0001111236789999999999999999


Q ss_pred             c----CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchh
Q 025660           81 A----GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (249)
Q Consensus        81 ~----~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (249)
                      +    ++|+||||++....   ... ..+++|..++.++++++++.+ +++||++||..++.                  
T Consensus       131 ~~~~~~~D~Vi~~aa~~~~---~~~-~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~------------------  187 (390)
T PLN02657        131 FSEGDPVDVVVSCLASRTG---GVK-DSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK------------------  187 (390)
T ss_pred             HHhCCCCcEEEECCccCCC---CCc-cchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC------------------
Confidence            8    58999999985322   111 456789999999999999988 89999999976421                  


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccccccccc-cc
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRS-HT  235 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  235 (249)
                             |...|..+|...|..+..  ...+++++++||+.+||+..     .   .+.....++....+++++..+ .+
T Consensus       188 -------p~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~-----~---~~~~~~~g~~~~~~GdG~~~~~~~  250 (390)
T PLN02657        188 -------PLLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG-----G---QVEIVKDGGPYVMFGDGKLCACKP  250 (390)
T ss_pred             -------cchHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH-----H---HHHhhccCCceEEecCCcccccCc
Confidence                   134588999999988765  23689999999999997531     1   222233344444457777655 67


Q ss_pred             chhhHHHhhhh
Q 025660          236 LFVYAIAFAFA  246 (249)
Q Consensus       236 i~v~d~a~a~~  246 (249)
                      ||++|+|++++
T Consensus       251 I~v~DlA~~i~  261 (390)
T PLN02657        251 ISEADLASFIA  261 (390)
T ss_pred             eeHHHHHHHHH
Confidence            99999988764

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.93  E-value=5.2e-25  Score=173.59  Aligned_cols=200  Identities=19%  Similarity=0.177  Sum_probs=150.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +.|.++||||+++||.+++++|.+.|++|++..|+.        ++++.|...... .++..+..|++|.++++.+++  
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~--------drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~   75 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARRE--------ERLEALADEIGA-GAALALALDVTDRAAVEAAIEAL   75 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccH--------HHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999        788877544332 468899999999988766665  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                           ++|++|||||....      ..++| +.++++|+.|..+..+++    .+.+ .++||++||..+.+..++    
T Consensus        76 ~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw-~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~----  149 (246)
T COG4221          76 PEEFGRIDILVNNAGLALGDPLDEADLDDW-DRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPG----  149 (246)
T ss_pred             HHhhCcccEEEecCCCCcCChhhhCCHHHH-HHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCC----
Confidence                 58999999998654      23344 599999999877755554    5566 679999999988666544    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCC-CCccHHHHHHHHcCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK-FAGSVRSSLALILGNV  222 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~  222 (249)
                                        .+.|+.||+....+...++.+.   +++++.|-||.|-+...+.. ..+-.....       
T Consensus       150 ------------------~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~-------  204 (246)
T COG4221         150 ------------------GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERAD-------  204 (246)
T ss_pred             ------------------CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHH-------
Confidence                              4579999999888888887764   79999999999966533221 111111111       


Q ss_pred             cccccccccccccchhhHHHhhhhcc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAFN  248 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~~  248 (249)
                           .......++.-+|+|+++.|.
T Consensus       205 -----~~y~~~~~l~p~dIA~~V~~~  225 (246)
T COG4221         205 -----KVYKGGTALTPEDIAEAVLFA  225 (246)
T ss_pred             -----HHhccCCCCCHHHHHHHHHHH
Confidence                 112234567778888888774

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.93  E-value=2.6e-25  Score=177.36  Aligned_cols=204  Identities=23%  Similarity=0.233  Sum_probs=145.3

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-CCCEE
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-GCTGV   86 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~v   86 (249)
                      |+|||||||||++|+..|.+.||+|++++|++        .+....         ..   .-++..+.+.+... ++|+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~--------~~~~~~---------~~---~~v~~~~~~~~~~~~~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRP--------PKASQN---------LH---PNVTLWEGLADALTLGIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCC--------cchhhh---------cC---ccccccchhhhcccCCCCEE
Confidence            68999999999999999999999999999998        221111         11   01112334444454 79999


Q ss_pred             EEccccCCC---CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           87 LHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        87 ih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      ||+||..-.   +..+.-+...+..+..|+.|.+++.+.++..+...-+|+.+||++.+ ...++|++++..+|...+|.
T Consensus        61 INLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~-~~~~tE~~~~g~~Fla~lc~  139 (297)
T COG1090          61 INLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSG-DRVVTEESPPGDDFLAQLCQ  139 (297)
T ss_pred             EECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCC-ceeeecCCCCCCChHHHHHH
Confidence            999996432   23333457888889999999999997653445555555556777654 56888889988888766554


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHh
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAF  243 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~  243 (249)
                       .|         |+...... ..|.+++.+|.|+|.++.-     +++..+.-..+-+.--.+++|.+...|||++|.+.
T Consensus       140 -~W---------E~~a~~a~-~~gtRvvllRtGvVLs~~G-----GaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~  203 (297)
T COG1090         140 -DW---------EEEALQAQ-QLGTRVVLLRTGVVLSPDG-----GALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVN  203 (297)
T ss_pred             -HH---------HHHHhhhh-hcCceEEEEEEEEEecCCC-----cchhhhcchhhhccCCccCCCCceeeeeeHHHHHH
Confidence             33         55544433 2589999999999999853     23333444444444446799999999999999999


Q ss_pred             hhhcc
Q 025660          244 AFAFN  248 (249)
Q Consensus       244 a~~~~  248 (249)
                      ++.|.
T Consensus       204 ~I~fl  208 (297)
T COG1090         204 AILFL  208 (297)
T ss_pred             HHHHH
Confidence            99874

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=3e-24  Score=180.37  Aligned_cols=187  Identities=15%  Similarity=0.132  Sum_probs=129.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +.|+||||||+||||++|+++|+++|++|+...                               .|+.+.+.+...++  
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------------~~~~~~~~v~~~l~~~   56 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------------GRLENRASLEADIDAV   56 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------------CccCCHHHHHHHHHhc
Confidence            347899999999999999999999999986532                               23344555665565  


Q ss_pred             CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC----CccccCCCCC
Q 025660           82 GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK----DVDMMDETFW  152 (249)
Q Consensus        82 ~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~----~~~~~~e~~~  152 (249)
                      ++|+|||+||....     ...++. .++++|+.++.+|+++|++.+ ++ ++++||..+|++...    ...+++|+++
T Consensus        57 ~~D~ViH~Aa~~~~~~~~~~~~~p~-~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~  133 (298)
T PLN02778         57 KPTHVFNAAGVTGRPNVDWCESHKV-ETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDT  133 (298)
T ss_pred             CCCEEEECCcccCCCCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCC
Confidence            68999999998643     123454 889999999999999999988 65 566677666644321    1224666554


Q ss_pred             CchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccc
Q 025660          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNR  232 (249)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (249)
                      +        ..|.+.|+.||.++|.++..+.     +..++|++.++|+....  .  ..++...+.+...+..+     
T Consensus       134 p--------~~~~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~~--~--~~fi~~~~~~~~~~~~~-----  191 (298)
T PLN02778        134 P--------NFTGSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLSN--P--RNFITKITRYEKVVNIP-----  191 (298)
T ss_pred             C--------CCCCCchHHHHHHHHHHHHHhh-----ccEEeeecccCCccccc--H--HHHHHHHHcCCCeeEcC-----
Confidence            2        2245789999999999998875     35678888777764211  1  11333333333322222     


Q ss_pred             cccchhhHHHhhhh
Q 025660          233 SHTLFVYAIAFAFA  246 (249)
Q Consensus       233 ~~~i~v~d~a~a~~  246 (249)
                      .+|+|++|++.++.
T Consensus       192 ~s~~yv~D~v~al~  205 (298)
T PLN02778        192 NSMTILDELLPISI  205 (298)
T ss_pred             CCCEEHHHHHHHHH
Confidence            37999999998764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.93  E-value=3.1e-25  Score=182.31  Aligned_cols=206  Identities=17%  Similarity=0.128  Sum_probs=145.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++++|||||+|+||++++++|+++|++|++++|+.        ++...+ .++...+.+++.+.+|+++++++.++++ 
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   74 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLND--------EAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDY   74 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            457999999999999999999999999999999987        333222 2222233468899999999999888776 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+|||+|+.....     ..+..+..+.+|+.++..+++    .+++.+ .++||++||...+.+..     
T Consensus        75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~-----  148 (258)
T PRK12429         75 AVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSA-----  148 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCC-----
Confidence                  579999999975441     112233677889998555555    445555 78999999986554321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHc--CC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL--GN  221 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~--~~  221 (249)
                                       +.+.|+.+|.+.+.+.+.++.+   .+++++++|||.+++|.......       ....  +.
T Consensus       149 -----------------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~-------~~~~~~~~  204 (258)
T PRK12429        149 -----------------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIP-------DLAKERGI  204 (258)
T ss_pred             -----------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhh-------hhccccCC
Confidence                             1357999999999888877665   37999999999999987543211       1110  00


Q ss_pred             Cc-----ccccccccccccchhhHHHhhhhc
Q 025660          222 VK-----LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~-----~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ..     ..+......+.|++++|+++++.|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  235 (258)
T PRK12429        205 SEEEVLEDVLLPLVPQKRFTTVEEIADYALF  235 (258)
T ss_pred             ChHHHHHHHHhccCCccccCCHHHHHHHHHH
Confidence            00     011223345689999999998765

>PLN00016 RNA-binding protein; Provisional

Probab=99.93  E-value=1.3e-24  Score=188.42  Aligned_cols=192  Identities=18%  Similarity=0.143  Sum_probs=139.0

Q ss_pred             CCCeEEEe----ccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh--------ccCCCCCCCeEEEEcCCC
Q 025660            4 GKGRVCVT----GGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL--------KNLPGASERLRIFHADLS   71 (249)
Q Consensus         4 ~~~~vlIt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l--------~~~~~~~~~~~~~~~Dl~   71 (249)
                      ++++||||    |||||||++|+++|+++||+|++++|+..        ....+        .++.  ..+++++.+|+.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~--------~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~  120 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKE--------PSQKMKKEPFSRFSELS--SAGVKTVWGDPA  120 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCc--------chhhhccCchhhhhHhh--hcCceEEEecHH
Confidence            45789999    99999999999999999999999999872        11111        1111  124788999998


Q ss_pred             ChhhHHHHH--cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCC
Q 025660           72 HPDGFDAAI--AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        72 ~~~~~~~~~--~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                      |.   .+++  .++|+|||+++.               +..++++|+++|++.+ +++||++||..+|+..  ...+..|
T Consensus       121 d~---~~~~~~~~~d~Vi~~~~~---------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~--~~~p~~E  179 (378)
T PLN00016        121 DV---KSKVAGAGFDVVYDNNGK---------------DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKS--DEPPHVE  179 (378)
T ss_pred             HH---HhhhccCCccEEEeCCCC---------------CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCC--CCCCCCC
Confidence            73   3333  469999999763               1346788999999988 8999999999876543  2234556


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-cccccc
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KLKICC  228 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  228 (249)
                      +.+..         |   +. +|..+|.+++.    .+++++++||+++|||+...   .+...+...+..+. ...++.
T Consensus       180 ~~~~~---------p---~~-sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~---~~~~~~~~~~~~~~~i~~~g~  239 (378)
T PLN00016        180 GDAVK---------P---KA-GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNK---DCEEWFFDRLVRGRPVPIPGS  239 (378)
T ss_pred             CCcCC---------C---cc-hHHHHHHHHHH----cCCCeEEEeceeEECCCCCC---chHHHHHHHHHcCCceeecCC
Confidence            55422         1   22 79999987653    58999999999999997543   23334444344444 334467


Q ss_pred             cccccccchhhHHHhhhh
Q 025660          229 VMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       229 ~~~~~~~i~v~d~a~a~~  246 (249)
                      +.+.++|+|++|+|+++.
T Consensus       240 g~~~~~~i~v~Dva~ai~  257 (378)
T PLN00016        240 GIQLTQLGHVKDLASMFA  257 (378)
T ss_pred             CCeeeceecHHHHHHHHH
Confidence            888899999999999875

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.1e-24  Score=179.39  Aligned_cols=164  Identities=20%  Similarity=0.204  Sum_probs=127.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      .+++|||||+|+||++++++|+++|++|++++|+.        +..+.+....  ..++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   71 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRP--------DALDDLKARY--GDRLWVLQLDVTDSAAVRAVVDRAF   71 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhc--cCceEEEEccCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999986        4444443221  2367899999999998887765   


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          ++|+||||||.....     ..+..+..+++|+.++.++++++    ++.+ .++||++||..+..+.        
T Consensus        72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--------  142 (276)
T PRK06482         72 AALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAY--------  142 (276)
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCC--------
Confidence                479999999976441     11223478889999999999987    4444 6799999996543211        


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGP  201 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~  201 (249)
                                    .+.+.|+.||+..|.+++.++.+   ++++++++|||.+.++
T Consensus       143 --------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~  184 (276)
T PRK06482        143 --------------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTN  184 (276)
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccC
Confidence                          12457999999999999988765   5899999999998443

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.8e-24  Score=178.06  Aligned_cols=167  Identities=19%  Similarity=0.119  Sum_probs=130.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +....+...  ...++..+.+|++|++++.++++  
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~   72 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE--------AARADFEAL--HPDRALARLLDVTDFDAIDAVVADA   72 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCH--------HHHHHHHhh--cCCCeeEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987        444444332  12357889999999999888776  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+      
T Consensus        73 ~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~------  145 (277)
T PRK06180         73 EATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMP------  145 (277)
T ss_pred             HHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCC------
Confidence                 479999999975431     1122346789999999999998643    34 57999999977543321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                      +...|+.+|...|.+++.++.+   +|++++++|||.+.++..
T Consensus       146 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~  188 (277)
T PRK06180        146 ----------------GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWA  188 (277)
T ss_pred             ----------------CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCcc
Confidence                            2457999999999988887765   489999999999988764

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.5e-24  Score=176.43  Aligned_cols=172  Identities=17%  Similarity=0.148  Sum_probs=131.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..++++++||||+|+||++++++|+++|++|++++|+.        +..... .+.. .+.++.++.+|++|++++.++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~   71 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDA--------EAAERVAAAIA-AGGRAFARQGDVGSAEAVEAL   71 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCH--------HHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHH
Confidence            655678999999999999999999999999999999986        332222 2221 234688999999999998887


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|+|||+++....     ...+..+..+.+|+.++.++.+.+    ++.+ .++|+++||....++..  
T Consensus        72 ~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~--  148 (252)
T PRK06138         72 VDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGR--  148 (252)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCC--
Confidence            75       58999999997543     111222467899999987776655    4445 67999999986544321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                          +.+.|+.+|...+.+++.++.+.   +++++++|||.++++...
T Consensus       149 --------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  192 (252)
T PRK06138        149 --------------------GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFR  192 (252)
T ss_pred             --------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchh
Confidence                                13579999999999998887654   899999999999998643

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=1.4e-24  Score=167.76  Aligned_cols=209  Identities=21%  Similarity=0.246  Sum_probs=164.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++|||||++|.+|++|.+.+.++|.  +-.++.-+.                           .+||++..+.+.+++ 
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------------d~DLt~~a~t~~lF~~   53 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------------DADLTNLADTRALFES   53 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------------cccccchHHHHHHHhc
Confidence            36899999999999999999999876  222222222                           489999999999997 


Q ss_pred             -CCCEEEEccccCCC---CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           82 -GCTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        82 -~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                       +++.|||+|+..+.   +...+. +.+..|+.-..+++..|-+.+ +++++++.|.+.  .++....|++|+-...-. 
T Consensus        54 ekPthVIhlAAmVGGlf~N~~ynl-dF~r~Nl~indNVlhsa~e~g-v~K~vsclStCI--fPdkt~yPIdEtmvh~gp-  128 (315)
T KOG1431|consen   54 EKPTHVIHLAAMVGGLFHNNTYNL-DFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCI--FPDKTSYPIDETMVHNGP-  128 (315)
T ss_pred             cCCceeeehHhhhcchhhcCCCch-HHHhhcceechhHHHHHHHhc-hhhhhhhcceee--cCCCCCCCCCHHHhccCC-
Confidence             48999999997665   455555 889999999999999999999 999999999875  345567788888543211 


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC------CCccHHHHHHHHcCCC--ccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVRSSLALILGNV--KLKICCV  229 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~  229 (249)
                         +.+....|+.+|+++.-.-+.|+.++|...+.+.|.++|||.+...      +|..+..+..+...+.  ...|+.|
T Consensus       129 ---phpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG  205 (315)
T KOG1431|consen  129 ---PHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSG  205 (315)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCC
Confidence               1222346999999998888999999999999999999999987643      3444555555555554  4577999


Q ss_pred             ccccccchhhHHHhhhhcc
Q 025660          230 MNRSHTLFVYAIAFAFAFN  248 (249)
Q Consensus       230 ~~~~~~i~v~d~a~a~~~~  248 (249)
                      .++|+|+|++|+|.++.|.
T Consensus       206 ~PlRqFiys~DLA~l~i~v  224 (315)
T KOG1431|consen  206 SPLRQFIYSDDLADLFIWV  224 (315)
T ss_pred             ChHHHHhhHhHHHHHHHHH
Confidence            9999999999999998763

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.1e-23  Score=175.08  Aligned_cols=207  Identities=17%  Similarity=0.143  Sum_probs=144.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+++++||||+|+||++++++|+++|++|++++|+.        .....+ .+....+.++.++.+|+++.+++.++++ 
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRV--------EKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQ   80 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            346899999999999999999999999999999876        332222 1122223467889999999999888776 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+|||+||.....     ..+..+..+.+|+.++.++++.+.+    .+ .++||++||...+.+.+     
T Consensus        81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~-----  154 (274)
T PRK07775         81 AEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRP-----  154 (274)
T ss_pred             HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC-----
Confidence                  479999999975431     1122236679999999998887653    33 56899999976543221     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.+|.+.|.+++.++.+.   |++++++|||.+.++......+.....+.....    
T Consensus       155 -----------------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~----  213 (274)
T PRK07775        155 -----------------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWA----  213 (274)
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHH----
Confidence                             13469999999999999887654   899999999988776432111111111111110    


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       .+ .....+.|++++|+|.++.+
T Consensus       214 -~~-~~~~~~~~~~~~dva~a~~~  235 (274)
T PRK07775        214 -KW-GQARHDYFLRASDLARAITF  235 (274)
T ss_pred             -Hh-cccccccccCHHHHHHHHHH
Confidence             01 12234569999999999865

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.92  E-value=1.5e-23  Score=172.68  Aligned_cols=166  Identities=23%  Similarity=0.161  Sum_probs=124.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        .......++...+.++.++.+|+++.+++.++++  
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE--------LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAA   78 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch--------HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999875        2222222222223467889999999988877765  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                           ++|++|||||....      ...+.++..+++|+.++..+++.+    ++.+ .++||++||...+..       
T Consensus        79 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~-------  150 (260)
T PRK12823         79 VEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRGI-------  150 (260)
T ss_pred             HHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccCC-------
Confidence                 47999999985321      112223477889998877655544    4444 579999999765311       


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                                       +...|+.||.+.+.+.+.++.+.   ++++++|+||.+++|.
T Consensus       151 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        151 -----------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP  192 (260)
T ss_pred             -----------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence                             12359999999999999887764   8999999999999985

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.92  E-value=2.5e-24  Score=177.16  Aligned_cols=209  Identities=14%  Similarity=0.089  Sum_probs=149.4

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.        +....+.+..  ..++.++.+|+++++++.++++ 
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   73 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKP--------ARARLAALEI--GPAAIAVSLDVTRQDSIDRIVAA   73 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCH--------HHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999987        4443332211  2357889999999998888776 


Q ss_pred             ------CCCEEEEccccCCC---C--CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF---E--DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~---~--~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|++||+||....   .  ..+.++..+++|+.++.++++++.+.    +..++||++||.....+.+     
T Consensus        74 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  148 (257)
T PRK07067         74 AVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA-----  148 (257)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC-----
Confidence                  47999999997533   1  11233478999999999999988643    1135899999965432211     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHc---C
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL---G  220 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~---~  220 (249)
                                       +...|+.||...+.+.+.++.+   +++++++++||.++|+......    ..+.....   +
T Consensus       149 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~  207 (257)
T PRK07067        149 -----------------LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVD----ALFARYENRPPG  207 (257)
T ss_pred             -----------------CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhh----hhhhhccCCCHH
Confidence                             2457999999999998887764   5899999999999998643210    01111000   0


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .....+....+.+.+.+.+|+|.++.|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (257)
T PRK07067        208 EKKRLVGEAVPLGRMGVPDDLTGMALF  234 (257)
T ss_pred             HHHHHHhhcCCCCCccCHHHHHHHHHH
Confidence            001123344566789999999998765

>PRK06194 hypothetical protein; Provisional

Probab=99.92  E-value=9.7e-24  Score=176.34  Aligned_cols=199  Identities=12%  Similarity=0.015  Sum_probs=140.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.. .++...+.++.++.+|++|.+++.++++ 
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   76 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQ--------DALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADA   76 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999976        332222 2222223467889999999999988876 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCC-----cceEEEEcccceeeccC
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGT-----VKRVVYTSSNAAVFYND  141 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~-----~~~~v~~SS~~~~~~~~  141 (249)
                            .+|+||||||.....     ..+.++..+++|+.++.++++++    .+...     .+++|++||..++++.+
T Consensus        77 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  156 (287)
T PRK06194         77 ALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP  156 (287)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC
Confidence                  479999999986541     11223467899999998877774    44431     15899999987654321


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-----CCcEEEeecCeEeCCCCCCCCCccHHHHHH
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKFAGSVRSSLA  216 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~  216 (249)
                                            +...|+.+|.+.+.+++.++.+.     +++++.+.||.+.++.....          
T Consensus       157 ----------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~----------  204 (287)
T PRK06194        157 ----------------------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE----------  204 (287)
T ss_pred             ----------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc----------
Confidence                                  13569999999999998887654     47788888887766543211          


Q ss_pred             HHcCCCcccccccccccccchhhHHHhh
Q 025660          217 LILGNVKLKICCVMNRSHTLFVYAIAFA  244 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~i~v~d~a~a  244 (249)
                        .+.+...++.+.+.++|++++|.+.+
T Consensus       205 --~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T PRK06194        205 --RNRPADLANTAPPTRSQLIAQAMSQK  230 (287)
T ss_pred             --ccCchhcccCccccchhhHHHHHHHh
Confidence              11222223445566677776665554

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.92  E-value=8.8e-24  Score=173.37  Aligned_cols=204  Identities=17%  Similarity=0.128  Sum_probs=143.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC-CCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      +++|||||+|+||++++++|+++|++|++++|+.        +..+.+... .....++.++.+|+.|++++.++++   
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGE--------AGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAA   73 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999999999987        433333221 1122468889999999997766554   


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          .+|+|||+|+.....     ..+..+..+..|+.++..+++.+    ++.+ .++||++||...+.+.+.      
T Consensus        74 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~------  146 (255)
T TIGR01963        74 AEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASPF------  146 (255)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCCC------
Confidence                479999999975431     11223467889999988877776    4455 689999999765433211      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-cc
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KL  224 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~  224 (249)
                                      ...|+.+|...+.+++.++.+   .+++++++|||.+++|....       .+........ ..
T Consensus       147 ----------------~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~-------~~~~~~~~~~~~~  203 (255)
T TIGR01963       147 ----------------KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK-------QIADQAKTRGIPE  203 (255)
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH-------HHHhhhcccCCCc
Confidence                            246999999999888877654   38999999999999986321       1111111111 00


Q ss_pred             ------cccccccccccchhhHHHhhhhc
Q 025660          225 ------KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ------~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            .+....+.++|++++|+|.++.+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  232 (255)
T TIGR01963       204 EQVIREVMLPGQPTKRFVTVDEVAETALF  232 (255)
T ss_pred             hHHHHHHHHccCccccCcCHHHHHHHHHH
Confidence                  12234466789999999998764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=1.5e-23  Score=171.10  Aligned_cols=202  Identities=19%  Similarity=0.150  Sum_probs=143.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++||||||+|+||++|+++|+++|++|+++.|+..       ...+.+. .......++.++.+|+++++++.++++ 
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   77 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE-------EAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAA   77 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH-------HHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHH
Confidence            3468999999999999999999999999988777651       2222221 111223468899999999998888775 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|.|||+||.....     ..+..+..+++|+.++.++++.+.    +.+ .++||++||..++++..     
T Consensus        78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~-----  151 (249)
T PRK12825         78 AVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWP-----  151 (249)
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCC-----
Confidence                  479999999965431     122234778999999999988874    445 68999999987653321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.+|...+.++..++.+   .+++++++|||.++|+........   .....   .. 
T Consensus       152 -----------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~---~~~~~---~~-  207 (249)
T PRK12825        152 -----------------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE---AREAK---DA-  207 (249)
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch---hHHhh---hc-
Confidence                             1356999999999888877665   589999999999999975442111   11110   00 


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           ......+++.+|+++++.|
T Consensus       208 -----~~~~~~~~~~~dva~~~~~  226 (249)
T PRK12825        208 -----ETPLGRSGTPEDIARAVAF  226 (249)
T ss_pred             -----cCCCCCCcCHHHHHHHHHH
Confidence                 1112238889999988765

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.6e-24  Score=176.87  Aligned_cols=212  Identities=19%  Similarity=0.100  Sum_probs=144.5

Q ss_pred             CCC-CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            1 MEE-GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         1 m~~-~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |+. +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|++++.+
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~--------~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~   72 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDK--------PGLRQAVNHLRAEGFDVHGVMCDVRHREEVTH   72 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            443 457899999999999999999999999999999886        333322 2222223467889999999999888


Q ss_pred             HHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCC
Q 025660           79 AIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      +++       ++|+|||+||....     ...+.++..+++|+.++.++++.+.+    .+..++||++||..++.+.+ 
T Consensus        73 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~-  151 (275)
T PRK05876         73 LADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA-  151 (275)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC-
Confidence            876       37999999997533     11222347789999999998888753    33246899999987653321 


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHH-HH
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LI  218 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~-~~  218 (249)
                                           +...|+.||...+.+.+.++.+   +|+++++++||.+.++......    ..... ..
T Consensus       152 ---------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~  206 (275)
T PRK05876        152 ---------------------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE----RIRGAACA  206 (275)
T ss_pred             ---------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh----hhcCcccc
Confidence                                 2457999999755544444433   4899999999999988643210    00000 00


Q ss_pred             cCCCcccccccccccccchhhHHHhhhh
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~  246 (249)
                      .......++.....+++++++|+|++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (275)
T PRK05876        207 QSSTTGSPGPLPLQDDNLGVDDIAQLTA  234 (275)
T ss_pred             ccccccccccccccccCCCHHHHHHHHH
Confidence            0011112233345578899999998875

>PRK05865 hypothetical protein; Provisional

Probab=99.92  E-value=8.5e-24  Score=195.88  Aligned_cols=168  Identities=23%  Similarity=0.280  Sum_probs=131.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+|+||||+||||++++++|+++|++|++++|+.        ...     .   ..+++++.+|++|.+++.++++++|+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~--------~~~-----~---~~~v~~v~gDL~D~~~l~~al~~vD~   64 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHR--------PDS-----W---PSSADFIAADIRDATAVESAMTGADV   64 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCc--------hhh-----c---ccCceEEEeeCCCHHHHHHHHhCCCE
Confidence            3799999999999999999999999999999975        110     0   12477899999999999999999999


Q ss_pred             EEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCC
Q 025660           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (249)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (249)
                      |||+|+...        ..+++|+.++.+++++|++.+ +++||++||..                              
T Consensus        65 VVHlAa~~~--------~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~------------------------------  105 (854)
T PRK05865         65 VAHCAWVRG--------RNDHINIDGTANVLKAMAETG-TGRIVFTSSGH------------------------------  105 (854)
T ss_pred             EEECCCccc--------chHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH------------------------------
Confidence            999998632        145789999999999999988 88999999842                              


Q ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhhh
Q 025660          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAF  245 (249)
Q Consensus       166 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~  245 (249)
                            |..+|+++..    ++++++++||+++|||+..    .   .+... ........+.+...++|+|++|+|+++
T Consensus       106 ------K~aaE~ll~~----~gl~~vILRp~~VYGP~~~----~---~i~~l-l~~~v~~~G~~~~~~dfIhVdDVA~Ai  167 (854)
T PRK05865        106 ------QPRVEQMLAD----CGLEWVAVRCALIFGRNVD----N---WVQRL-FALPVLPAGYADRVVQVVHSDDAQRLL  167 (854)
T ss_pred             ------HHHHHHHHHH----cCCCEEEEEeceEeCCChH----H---HHHHH-hcCceeccCCCCceEeeeeHHHHHHHH
Confidence                  5667776643    6899999999999999632    1   22222 122222234445567999999999987


Q ss_pred             h
Q 025660          246 A  246 (249)
Q Consensus       246 ~  246 (249)
                      .
T Consensus       168 ~  168 (854)
T PRK05865        168 V  168 (854)
T ss_pred             H
Confidence            4

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.92  E-value=3.2e-23  Score=162.02  Aligned_cols=179  Identities=29%  Similarity=0.288  Sum_probs=137.5

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCEEE
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVL   87 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   87 (249)
                      |+|+||||++|++++++|+++|++|+++.|++        ++.+.       ..+++++.+|+.|++++.+.++++|+||
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~--------~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSP--------SKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSG--------GGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCc--------hhccc-------ccccccceeeehhhhhhhhhhhhcchhh
Confidence            79999999999999999999999999999998        43333       3479999999999999999999999999


Q ss_pred             EccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCch
Q 025660           88 HVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS  167 (249)
Q Consensus        88 h~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~  167 (249)
                      |+++....            ....++++++++++.+ .+++|++||..++......  ...+..+   .        ...
T Consensus        66 ~~~~~~~~------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~--~~~~~~~---~--------~~~  119 (183)
T PF13460_consen   66 HAAGPPPK------------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGL--FSDEDKP---I--------FPE  119 (183)
T ss_dssp             ECCHSTTT------------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSE--EEGGTCG---G--------GHH
T ss_pred             hhhhhhcc------------cccccccccccccccc-cccceeeeccccCCCCCcc--ccccccc---c--------hhh
Confidence            99986332            1778889999999998 8999999998864422221  1111111   0        135


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          168 YAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       168 Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      |...|..+|++++.    .+++++++||+.+||+.....  .+.              ...+.....+|+.+|+|++++.
T Consensus       120 ~~~~~~~~e~~~~~----~~~~~~ivrp~~~~~~~~~~~--~~~--------------~~~~~~~~~~i~~~DvA~~~~~  179 (183)
T PF13460_consen  120 YARDKREAEEALRE----SGLNWTIVRPGWIYGNPSRSY--RLI--------------KEGGPQGVNFISREDVAKAIVE  179 (183)
T ss_dssp             HHHHHHHHHHHHHH----STSEEEEEEESEEEBTTSSSE--EEE--------------SSTSTTSHCEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHh----cCCCEEEEECcEeEeCCCcce--eEE--------------eccCCCCcCcCCHHHHHHHHHH
Confidence            88889888877743    699999999999999964311  110              0134455599999999999863

...

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.92  E-value=2.3e-23  Score=170.43  Aligned_cols=203  Identities=21%  Similarity=0.129  Sum_probs=144.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++||||||+|+||++++++|+++|++|++++|+.        ++...+ ..+.....++.++.+|++|++++.++++ 
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICG--------DDAAATAELVEAAGGKARARQVDVRDRAALKAAVAA   76 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        222221 2222223358899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+|||+++....     ...+.....+..|+.++.++++.+.    +.+ .++||++||..++... .    
T Consensus        77 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~-~----  150 (251)
T PRK12826         77 GVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVG-Y----  150 (251)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccC-C----
Confidence                  58999999987653     1112224789999999999998874    344 6799999997653110 0    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                      .+...|+.+|...+.+++.+..+   .+++++++|||.++||........   .......... 
T Consensus       151 ----------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~---~~~~~~~~~~-  210 (251)
T PRK12826        151 ----------------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA---QWAEAIAAAI-  210 (251)
T ss_pred             ----------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch---HHHHHHHhcC-
Confidence                            11356999999999999887665   489999999999999975432221   1111111111 


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                             ....+++++|++.++.+
T Consensus       211 -------~~~~~~~~~dva~~~~~  227 (251)
T PRK12826        211 -------PLGRLGEPEDIAAAVLF  227 (251)
T ss_pred             -------CCCCCcCHHHHHHHHHH
Confidence                   11257888998888654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.3e-23  Score=171.97  Aligned_cols=207  Identities=18%  Similarity=0.114  Sum_probs=146.3

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..+++++|||||+|+||++++++|+++|++|++++|+.        +....+ ..+.. +.++.++.+|++|++++.++
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~   71 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE--------EAAERVAAEILA-GGRAIAVAADVSDEADVEAA   71 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHH
Confidence            556678999999999999999999999999999999987        333332 11111 34578999999999999888


Q ss_pred             Hc-------CCCEEEEccccCCCC------CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCC
Q 025660           80 IA-------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      ++       ++|+|||+|+.....      ..+..+..+.+|+.++..+++.+.+    .+ .++||++||..++.+.+ 
T Consensus        72 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-  149 (251)
T PRK07231         72 VAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRP-  149 (251)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCC-
Confidence            75       479999999974321      1222347899999988877776654    44 67999999987654321 


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHc
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~  219 (249)
                                           +...|+.+|...+.+++.++.+.   +++++.++||.+.++...............   
T Consensus       150 ---------------------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~---  205 (251)
T PRK07231        150 ---------------------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRA---  205 (251)
T ss_pred             ---------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHH---
Confidence                                 24569999999988888776653   899999999999887643221100001111   


Q ss_pred             CCCcccccccccccccchhhHHHhhhhc
Q 025660          220 GNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           .+........+++.+|+|.++.+
T Consensus       206 -----~~~~~~~~~~~~~~~dva~~~~~  228 (251)
T PRK07231        206 -----KFLATIPLGRLGTPEDIANAALF  228 (251)
T ss_pred             -----HHhcCCCCCCCcCHHHHHHHHHH
Confidence                 11112233457889999988765

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=2.8e-23  Score=170.67  Aligned_cols=203  Identities=18%  Similarity=0.116  Sum_probs=145.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|++        ++.+.+ ..+...+.++..+.+|++|++++.++++ 
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP--------AKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA   80 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence            458999999999999999999999999999999986        333322 2222223457889999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+|||+||....     ...+.++..+.+|+.++.++++.+.+.    + .++||++||.....+.+     
T Consensus        81 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~-----  154 (255)
T PRK07523         81 FEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALARP-----  154 (255)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCCC-----
Confidence                  37999999997543     112223477889999999999988753    3 57999999975432211     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.+|...+.+.+.++.+   +|++++++|||.+.++........  ......+     
T Consensus       155 -----------------~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~~~~-----  210 (255)
T PRK07523        155 -----------------GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFSAWL-----  210 (255)
T ss_pred             -----------------CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC--HHHHHHH-----
Confidence                             1356999999999998888763   589999999999999864321111  0111111     


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         ........+...+|+|.++.|
T Consensus       211 ---~~~~~~~~~~~~~dva~~~~~  231 (255)
T PRK07523        211 ---EKRTPAGRWGKVEELVGACVF  231 (255)
T ss_pred             ---HhcCCCCCCcCHHHHHHHHHH
Confidence               111223456778898888765

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.91  E-value=3.4e-23  Score=168.71  Aligned_cols=204  Identities=21%  Similarity=0.173  Sum_probs=145.5

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+.+++++|||||+|+||++++++|+++|++|++++|++        .+.+.+ ......+.++.++.+|++|++++.++
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNE--------EAAEALAAELRAAGGEARVLVFDVSDEAAVRAL   72 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh--------hHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            655668999999999999999999999999999999987        332222 22222345688899999999988887


Q ss_pred             HcC-------CCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCC
Q 025660           80 IAG-------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~~-------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++.       +|.|||++|.....     ..+..+..++.|+.++.++++.+.    +.+ .++||++||.....+..  
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~~--  149 (246)
T PRK05653         73 IEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGNP--  149 (246)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCCC--
Confidence            763       59999999875431     112224678899999999888885    344 67999999976432210  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.+|...+.+++.++.+   .+++++++|||.++|+....    +..........
T Consensus       150 --------------------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~----~~~~~~~~~~~  205 (246)
T PRK05653        150 --------------------GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG----LPEEVKAEILK  205 (246)
T ss_pred             --------------------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh----hhHHHHHHHHh
Confidence                                2356999999998888887654   48999999999999987532    11111111111


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                              ......+++.+|++.++.|
T Consensus       206 --------~~~~~~~~~~~dva~~~~~  224 (246)
T PRK05653        206 --------EIPLGRLGQPEEVANAVAF  224 (246)
T ss_pred             --------cCCCCCCcCHHHHHHHHHH
Confidence                    1122557788888887755

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.8e-23  Score=172.61  Aligned_cols=168  Identities=17%  Similarity=0.112  Sum_probs=130.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++||||||+|+||++++++|+++|++|++++|+.        +....+.+..  ...+..+++|+++++++.++++  
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   71 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDT--------ATLADLAEKY--GDRLLPLALDVTDRAAVFAAVETA   71 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHhc--cCCeeEEEccCCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999987        4444332221  2357889999999998877765  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           .+|+||||||.....     ..+.++..+++|+.++.++++.+    ++.+ .+++|++||..++.+.+.     
T Consensus        72 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~-----  145 (275)
T PRK08263         72 VEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPM-----  145 (275)
T ss_pred             HHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCCC-----
Confidence                 479999999976431     11233588999999988877776    4445 679999999776543211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                       ...|+.+|...+.+.+.++.+   +|++++++|||.+.++...
T Consensus       146 -----------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        146 -----------------SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             -----------------ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence                             346999999999888887665   5899999999999988653

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.1e-23  Score=170.54  Aligned_cols=173  Identities=17%  Similarity=0.166  Sum_probs=132.2

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |-.+++++|||||+|+||++++++|+++|++|++++|++        ...+.+ .++...+.++..+.+|+++++++..+
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTA--------ERLDEVAAEIDDLGRRALAVPTDITDEDQCANL   72 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHHhCCceEEEecCCCCHHHHHHH
Confidence            444678999999999999999999999999999999987        333322 22222234678999999999988877


Q ss_pred             Hc-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCc
Q 025660           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      ++       ++|+|||+||....      ...+.++..+++|+.++..+++++.+.  +..++||++||.....+.+   
T Consensus        73 ~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~---  149 (258)
T PRK07890         73 VALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP---  149 (258)
T ss_pred             HHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC---
Confidence            65       47999999986432      111233478999999999999998753  1136999999976532211   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                         +...|+.+|...+.+++.++.+   +++++++++||.++||..
T Consensus       150 -------------------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~  192 (258)
T PRK07890        150 -------------------KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL  192 (258)
T ss_pred             -------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence                               1356999999999999988765   389999999999999864

>PRK06182 short chain dehydrogenase; Validated

Probab=99.91  E-value=6.7e-23  Score=170.17  Aligned_cols=164  Identities=19%  Similarity=0.194  Sum_probs=126.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+.        ++.+.+..     .+++++.+|++|++++.++++  
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~--------~~l~~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~   68 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRV--------DKMEDLAS-----LGVHPLSLDVTDEASIKAAVDTI   68 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHh-----CCCeEEEeeCCCHHHHHHHHHHH
Confidence            457999999999999999999999999999999987        54444432     147889999999999988876  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHH----HHHHHHhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLG----ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~----l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||+||.....     ..+..+..+++|+.++..    +++.+++.+ .++||++||..+..+.+      
T Consensus        69 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~------  141 (273)
T PRK06182         69 IAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTP------  141 (273)
T ss_pred             HHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCC------
Confidence                 689999999975431     112234788999988544    555566665 67999999965432221      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                      ....|+.||.+.+.+.+.++.+   +|+++++++||.+.++..
T Consensus       142 ----------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        142 ----------------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             ----------------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence                            1245999999999987766543   589999999999999864

>PRK09135 pteridine reductase; Provisional

Probab=99.91  E-value=9.6e-23  Score=166.55  Aligned_cols=173  Identities=15%  Similarity=0.121  Sum_probs=127.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +.+++|||||+|+||++++++|+++|++|++++|+..       +..+.+. .+.. ....+.++.+|++|.+++.++++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   77 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSA-------AEADALAAELNALRPGSAAALQADLLDPDALPELVA   77 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999998741       2222211 1111 12357889999999999888876


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                             .+|+|||+||.....     ..+..+.++++|+.++.++++++.+.  ...+.+++++|....  .       
T Consensus        78 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-------  148 (249)
T PRK09135         78 ACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE--R-------  148 (249)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc--C-------
Confidence                   479999999964321     11223478999999999999998753  113467776653221  0       


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~~  205 (249)
                          +         .+|.+.|+.||...|.+++.++.+.  +++++++|||.++||....
T Consensus       149 ----~---------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~  195 (249)
T PRK09135        149 ----P---------LKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN  195 (249)
T ss_pred             ----C---------CCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc
Confidence                1         1235679999999999999988764  6999999999999998643

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=5.5e-23  Score=168.87  Aligned_cols=171  Identities=19%  Similarity=0.218  Sum_probs=128.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +|+++||||+|+||++++++|+++|++|++++|+..       +.... .+.......++.++.+|+++++++.++++  
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDD-------EELAATQQELRALGVEVIFFPADVADLSAHEAMLDAA   74 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCch-------hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            368999999999999999999999999999998751       11111 12211223468899999999998877765  


Q ss_pred             -----CCCEEEEccccCCCC-------CCChHHHhhhhHHhHHHHHHHHHHhc----CC-----cceEEEEcccceeecc
Q 025660           82 -----GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS----GT-----VKRVVYTSSNAAVFYN  140 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~t~~l~~~~~~~----~~-----~~~~v~~SS~~~~~~~  140 (249)
                           .+|+||||||.....       ..+.++..+++|+.++.++++++.+.    ..     .++||++||..++.+.
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  154 (256)
T PRK12745         75 QAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS  154 (256)
T ss_pred             HHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC
Confidence                 579999999974321       11233478999999999998887542    11     4579999998765433


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      .                      +...|+.+|.+.|.+++.++.+   ++++++++|||.+.++...
T Consensus       155 ~----------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~  199 (256)
T PRK12745        155 P----------------------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA  199 (256)
T ss_pred             C----------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc
Confidence            1                      1356999999999999988764   5899999999999997643

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.91  E-value=3.6e-23  Score=167.49  Aligned_cols=171  Identities=19%  Similarity=0.227  Sum_probs=134.3

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .++++++|||||++||.+++++|.++|++|+++.|+.        +++..+.....  .+..++++.+|+++++++.++.
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~--------~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~   75 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARRE--------DKLEALAKELEDKTGVEVEVIPADLSDPEALERLE   75 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcH--------HHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHH
Confidence            3567999999999999999999999999999999998        77776643322  2346789999999999988887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       .+|++|||||....     ...+..+.++++|+.++..|..    .+.+.+ .++||+++|..++.+.+.  
T Consensus        76 ~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~--  152 (265)
T COG0300          76 DELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPY--  152 (265)
T ss_pred             HHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcc--
Confidence            5       48999999998655     2233445899999987665555    455556 689999999988655432  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                          .+.|++||+..-.+...+..+   .|+++..|-||.+.++...
T Consensus       153 --------------------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         153 --------------------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             --------------------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence                                467999999666555555444   5899999999999998874

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.91  E-value=2.8e-23  Score=206.08  Aligned_cols=228  Identities=21%  Similarity=0.241  Sum_probs=158.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC----CeEEEEEcCCCCcccCCchhhhhhccC--------CCCCCCeEEEEcCCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG----YSVTTTVRSELDPEHRNSKDLSFLKNL--------PGASERLRIFHADLSH   72 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~Dl~~   72 (249)
                      .++|||||||||||++++++|++++    ++|+++.|...     ..+..+.+...        .....+++++.+|+++
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~ 1045 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKS-----EEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSK 1045 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCC-----hHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCC
Confidence            4689999999999999999999987    78999999751     11111121110        1112368899999975


Q ss_pred             ------hhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC----
Q 025660           73 ------PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK----  142 (249)
Q Consensus        73 ------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~----  142 (249)
                            .+.+.++.+++|+|||+|+....  ..+...+...|+.|+.++++++.+.+ .++|+|+||..+++....    
T Consensus      1046 ~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~--~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~ 1122 (1389)
T TIGR03443      1046 EKFGLSDEKWSDLTNEVDVIIHNGALVHW--VYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLS 1122 (1389)
T ss_pred             ccCCcCHHHHHHHHhcCCEEEECCcEecC--ccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchh
Confidence                  45677888899999999998765  33443566789999999999999887 789999999987643110    


Q ss_pred             ------CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHH
Q 025660          143 ------DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA  216 (249)
Q Consensus       143 ------~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~  216 (249)
                            ....++|+.+..    .....+.+.|+.||+.+|.++..+.. .|++++++|||.|||+...+. .....++..
T Consensus      1123 ~~~~~~~~~~~~e~~~~~----~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~-~~~~~~~~~ 1196 (1389)
T TIGR03443      1123 DELVQAGGAGIPESDDLM----GSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGA-TNTDDFLLR 1196 (1389)
T ss_pred             hhhhhccCCCCCcccccc----cccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCC-CCchhHHHH
Confidence                  011233333211    11123456799999999999998766 599999999999999975543 112223333


Q ss_pred             HHcCCCc-ccccccccccccchhhHHHhhhh
Q 025660          217 LILGNVK-LKICCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       217 ~~~~~~~-~~~~~~~~~~~~i~v~d~a~a~~  246 (249)
                      .+.+... -.++.+...++|++++|++.++.
T Consensus      1197 ~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~ 1227 (1389)
T TIGR03443      1197 MLKGCIQLGLIPNINNTVNMVPVDHVARVVV 1227 (1389)
T ss_pred             HHHHHHHhCCcCCCCCccccccHHHHHHHHH
Confidence            3333221 12345566799999999999874

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.6e-23  Score=171.02  Aligned_cols=164  Identities=22%  Similarity=0.263  Sum_probs=127.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++++||||+|+||++++++|.++|++|++++|+.        +..+.+...     +++++.+|++|.+++.++++  
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~--------~~~~~l~~~-----~~~~~~~Dl~d~~~~~~~~~~~   69 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKE--------EDVAALEAE-----GLEAFQLDYAEPESIAALVAQV   69 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHC-----CceEEEccCCCHHHHHHHHHHH
Confidence            567899999999999999999999999999999987        454444332     46789999999988877765  


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhH----HHHHHHHHHhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAING----TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~----t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+||||||.....     ..+..+..+++|+.|    ++.+++.+++.+ .++||++||..++.+.      
T Consensus        70 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~------  142 (277)
T PRK05993         70 LELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPM------  142 (277)
T ss_pred             HHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCC------
Confidence                  479999999875431     112234789999998    556666777666 6899999997653221      


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                      .+...|+.||.+.+.+.+.++.+   +|+++++|+||.+.++..
T Consensus       143 ----------------~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~  186 (277)
T PRK05993        143 ----------------KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR  186 (277)
T ss_pred             ----------------CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence                            12457999999999988877543   589999999999988754

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.2e-23  Score=168.43  Aligned_cols=203  Identities=19%  Similarity=0.158  Sum_probs=141.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEE-EcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++||||+|+||++++++|+++|++|+++ .|+.        +.... .......+.+++++.+|++|++++.++++ 
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~   77 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK--------QAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQ   77 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHH
Confidence            4799999999999999999999999999775 4554        22222 22222223467889999999998887766 


Q ss_pred             ------------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCC
Q 025660           82 ------------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 ------------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~  143 (249)
                                  ++|+|||+||.....     ..+.++..+++|+.++.++++.+.+. ...++||++||..++.+.+  
T Consensus        78 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~--  155 (254)
T PRK12746         78 LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT--  155 (254)
T ss_pred             HHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC--
Confidence                        489999999975431     12223467889999999999998764 2146899999987643221  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+   +++++++++||.+++|........  ..+......
T Consensus       156 --------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~~~~~~~~~  213 (254)
T PRK12746        156 --------------------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD--PEIRNFATN  213 (254)
T ss_pred             --------------------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC--hhHHHHHHh
Confidence                                1356999999999998887664   479999999999999864321110  011111111


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .        .....+.+++|++.++.+
T Consensus       214 ~--------~~~~~~~~~~dva~~~~~  232 (254)
T PRK12746        214 S--------SVFGRIGQVEDIADAVAF  232 (254)
T ss_pred             c--------CCcCCCCCHHHHHHHHHH
Confidence            1        122356678888888653

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.4e-23  Score=170.80  Aligned_cols=169  Identities=15%  Similarity=0.121  Sum_probs=127.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-C--CCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-L--PGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+.. .  .....+++++.+|++|++++.+ +
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~   72 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNP--------EKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-F   72 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-H
Confidence            356899999999999999999999999999999986        33332211 1  1112468899999999988776 4


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       .+|+||||||.....     ..+..+..+.+|+.++.++++.+    ++.+ .++||++||..+..+.+   
T Consensus        73 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~---  148 (280)
T PRK06914         73 QLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFP---  148 (280)
T ss_pred             HHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCC---
Confidence            3       479999999975431     11223467889999988888875    4445 67999999976543321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHH---HcCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE---EHGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~vrp~~v~g~~~~  204 (249)
                                         +.+.|+.+|...+.+++.++.   .++++++++|||.++++...
T Consensus       149 -------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  192 (280)
T PRK06914        149 -------------------GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWE  192 (280)
T ss_pred             -------------------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhh
Confidence                               245799999999998888763   35899999999999998643

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5e-23  Score=168.38  Aligned_cols=210  Identities=18%  Similarity=0.114  Sum_probs=142.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+..       +..+.+ ..+...+.++.++.+|+++++++.++++ 
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKA-------PRANKVVAEIEAAGGRASAVGADLTDEESVAALMDT   77 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCch-------HhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            3478999999999999999999999999999998751       112211 1111123457889999999999887775 


Q ss_pred             ------CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCCCCCc
Q 025660           82 ------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (249)
                            .+|+|||+|+.......++. ..+++|+.++.++++.+.+.- ..++||++||..+.....      .+..+  
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~~~~-~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------~~~~~--  148 (248)
T PRK07806         78 AREEFGGLDALVLNASGGMESGMDED-YAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT------VKTMP--  148 (248)
T ss_pred             HHHhCCCCcEEEECCCCCCCCCCCcc-eeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc------ccCCc--
Confidence                  48999999986433222333 778999999999999998752 136899999964321111      01111  


Q ss_pred             hhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccccccc
Q 025660          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMN  231 (249)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (249)
                               ....|+.||...|.+++.++.+   .++++++++|+.+-+|...........   ....       .....
T Consensus       149 ---------~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~---~~~~-------~~~~~  209 (248)
T PRK07806        149 ---------EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNP---GAIE-------ARREA  209 (248)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCH---HHHH-------HHHhh
Confidence                     1347999999999999988665   489999999998877643211000000   0000       00112


Q ss_pred             ccccchhhHHHhhhhcc
Q 025660          232 RSHTLFVYAIAFAFAFN  248 (249)
Q Consensus       232 ~~~~i~v~d~a~a~~~~  248 (249)
                      ...+++++|++++++|-
T Consensus       210 ~~~~~~~~dva~~~~~l  226 (248)
T PRK07806        210 AGKLYTVSEFAAEVARA  226 (248)
T ss_pred             hcccCCHHHHHHHHHHH
Confidence            34799999999998763

>PRK05717 oxidoreductase; Validated

Probab=99.91  E-value=9.9e-23  Score=167.47  Aligned_cols=168  Identities=15%  Similarity=0.089  Sum_probs=128.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        .+...+....  +.++.++.+|+++.+++.++++  
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~--------~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDR--------ERGSKVAKAL--GENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCH--------HHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999998876        3322221111  2357889999999988766654  


Q ss_pred             -----CCCEEEEccccCCCC-------CCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||.....       ..+.++..+++|+.++.++++++.+.  ...+++|++||...+.+.+.     
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~-----  153 (255)
T PRK05717         79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD-----  153 (255)
T ss_pred             HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC-----
Confidence                 379999999975321       11223478999999999999999742  11468999999876433211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~  203 (249)
                                       .+.|+.+|.+.+.+++.++.+.  ++++++++||.+.++..
T Consensus       154 -----------------~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~  194 (255)
T PRK05717        154 -----------------TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDP  194 (255)
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcc
Confidence                             2469999999999999988775  59999999999999753

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.6e-23  Score=169.12  Aligned_cols=172  Identities=23%  Similarity=0.243  Sum_probs=131.7

Q ss_pred             CCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ..+++++|||||+|+||++++++|+++|++|++++|++        +..+...++...+.++.++.+|+++++++.++++
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA--------PDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVE   75 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCCh--------hhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            34567999999999999999999999999999999987        3222222222233468899999999998888776


Q ss_pred             -------CCCEEEEccccCCC----CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccccC
Q 025660           82 -------GCTGVLHVATPVDF----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 -------~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                             .+|+|||+||....    ...+.++..+++|+.++.++.+.+.+.  ...++||++||..++.+..       
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------  148 (258)
T PRK08628         76 QTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG-------  148 (258)
T ss_pred             HHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC-------
Confidence                   47999999996432    111334478999999999988887642  1146899999977653321       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                     +...|+.||...+.+++.++.+   ++++++.|+||.+++|..
T Consensus       149 ---------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~  191 (258)
T PRK08628        149 ---------------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLY  191 (258)
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHH
Confidence                           1356999999999999988754   489999999999999864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=1e-22  Score=166.51  Aligned_cols=202  Identities=14%  Similarity=0.103  Sum_probs=143.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++++++||||+|+||++++++|+++|++|+++.++..       +..+.+ ..+...+.++.++.+|+++++++.++++.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSK-------EAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEE   77 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcH-------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999987665431       222222 22222334688999999999998888764


Q ss_pred             -------CCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           83 -------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        83 -------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                             +|+|||+||.....     ..+..+..+++|+.++.++++.+.+    .+ .++||++||..+..+..     
T Consensus        78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-----  151 (247)
T PRK12935         78 AVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGF-----  151 (247)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCCC-----
Confidence                   79999999975431     1123347889999999999998864    33 56999999976543221     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+   .++++++++||.+.++..... +.   ......     
T Consensus       152 -----------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-~~---~~~~~~-----  205 (247)
T PRK12935        152 -----------------GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV-PE---EVRQKI-----  205 (247)
T ss_pred             -----------------CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc-cH---HHHHHH-----
Confidence                             1356999999988888777665   389999999999988753221 11   111111     


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         ......+++.+.+|++.++.|
T Consensus       206 ---~~~~~~~~~~~~edva~~~~~  226 (247)
T PRK12935        206 ---VAKIPKKRFGQADEIAKGVVY  226 (247)
T ss_pred             ---HHhCCCCCCcCHHHHHHHHHH
Confidence               112234578999999999876

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=1.2e-22  Score=180.07  Aligned_cols=171  Identities=20%  Similarity=0.205  Sum_probs=129.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CC-------C--CCCCeEEEEcCCCCh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LP-------G--ASERLRIFHADLSHP   73 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~-------~--~~~~~~~~~~Dl~~~   73 (249)
                      ++++||||||+|+||++++++|+++|++|++++|+.        ++...+.. +.       .  ...+++++.+|++|.
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~--------ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~  150 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSA--------QRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP  150 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHhhhhccccccccccCceEEEEecCCCH
Confidence            457899999999999999999999999999999987        44333211 10       0  113578999999999


Q ss_pred             hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCC
Q 025660           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (249)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (249)
                      +++.+.+.++|+|||++|.......++. ..+.+|+.|+.++++++++.+ +++||++||..+....      ..+..  
T Consensus       151 esI~~aLggiDiVVn~AG~~~~~v~d~~-~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g------~p~~~--  220 (576)
T PLN03209        151 DQIGPALGNASVVICCIGASEKEVFDVT-GPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVG------FPAAI--  220 (576)
T ss_pred             HHHHHHhcCCCEEEEccccccccccchh-hHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccC------ccccc--
Confidence            9999999999999999987543212333 678899999999999999988 8999999997642111      00000  


Q ss_pred             chhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCC
Q 025660          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~  204 (249)
                              ....+.|...|..+|..+..    +|+++++||||.++++...
T Consensus       221 --------~~sk~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        221 --------LNLFWGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDA  259 (576)
T ss_pred             --------hhhHHHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCccc
Confidence                    01235677788888877653    6999999999999988543

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.6e-22  Score=166.25  Aligned_cols=200  Identities=18%  Similarity=0.086  Sum_probs=142.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. .+.  ..++.++.+|+++.+++.++++  
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~--------~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   71 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDA--------AALAAFADALG--DARFVPVACDLTDAASLAAALANA   71 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999987        4433322 221  2367889999999999887776  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||++|.....     ..+.+...+.+|+.++.++++.+.+    .+ .++||++||....... +     
T Consensus        72 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-~-----  144 (257)
T PRK07074         72 AAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAAL-G-----  144 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCC-C-----
Confidence                 379999999975431     1122235678999999888888743    34 5789999996532111 1     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                       ...|+.+|.+.+.+++.++.+.   ++++++++||.++++................       
T Consensus       145 -----------------~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-------  200 (257)
T PRK07074        145 -----------------HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEEL-------  200 (257)
T ss_pred             -----------------CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHH-------
Confidence                             1259999999999999887654   7999999999999886432111111111111       


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        .......+|++++|++.++.|
T Consensus       201 --~~~~~~~~~~~~~d~a~~~~~  221 (257)
T PRK07074        201 --KKWYPLQDFATPDDVANAVLF  221 (257)
T ss_pred             --HhcCCCCCCCCHHHHHHHHHH
Confidence              112344689999999999865

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=170.91  Aligned_cols=210  Identities=11%  Similarity=0.035  Sum_probs=143.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC--CCCCeEEEEcCCCChhhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG--ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~--~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++++|||||+|+||++++++|+++|++|++++|+.        ...+.+. .+..  ...++.++.+|+++.+++.++++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   73 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINS--------EKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSR   73 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHH
Confidence            56899999999999999999999999999999986        3332221 1111  11357899999999988877765


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             .+|+|||+||....     ...+.++..+++|+.++.++++.+.+    .+..++||++||..+.++..    
T Consensus        74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~----  149 (259)
T PRK12384         74 GVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK----  149 (259)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC----
Confidence                   47999999986543     11123347789999998887777654    22135999999965432221    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC-
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN-  221 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~-  221 (249)
                                        ....|+.||++.+.+++.++.+   +|++++++|||.++++....   ..+..+....... 
T Consensus       150 ------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~---~~~~~~~~~~~~~~  208 (259)
T PRK12384        150 ------------------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ---SLLPQYAKKLGIKP  208 (259)
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh---hhhHHHHHhcCCCh
Confidence                              1346999999988888877643   68999999999987764321   1111111111100 


Q ss_pred             -Ccc-cccccccccccchhhHHHhhhhc
Q 025660          222 -VKL-KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 -~~~-~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ... .+.+....+.+++.+|++.++.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~dv~~~~~~  236 (259)
T PRK12384        209 DEVEQYYIDKVPLKRGCDYQDVLNMLLF  236 (259)
T ss_pred             HHHHHHHHHhCcccCCCCHHHHHHHHHH
Confidence             011 12345566789999999999875

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.91  E-value=1.1e-22  Score=166.80  Aligned_cols=203  Identities=15%  Similarity=0.084  Sum_probs=143.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      +.+++|||||+|+||++++++|+++|++|++++|+.             +   .....++.++++|+++++++.++++. 
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-------------~---~~~~~~~~~~~~D~~~~~~~~~~~~~~   70 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-------------L---TQEDYPFATFVLDVSDAAAVAQVCQRL   70 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-------------h---hhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            447899999999999999999999999999998865             0   11123578899999999999888763 


Q ss_pred             ------CCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           83 ------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        83 ------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                            +|+|||+||.....     ..+..+..+++|+.++..+++.+.+    .+ .++||++||.....+..      
T Consensus        71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~~------  143 (252)
T PRK08220         71 LAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRI------  143 (252)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCC------
Confidence                  79999999975431     1122347899999999999988753    33 56899999976432211      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                      +.+.|+.+|...+.+++.++.+   +++++++++||.+++|.........  ........+...
T Consensus       144 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~  205 (252)
T PRK08220        144 ----------------GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDE--DGEQQVIAGFPE  205 (252)
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccch--hhhhhhhhhHHH
Confidence                            1356999999999999888776   5899999999999998643211000  000000000000


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .+........+++.+|+++++.|
T Consensus       206 ~~~~~~~~~~~~~~~dva~~~~~  228 (252)
T PRK08220        206 QFKLGIPLGKIARPQEIANAVLF  228 (252)
T ss_pred             HHhhcCCCcccCCHHHHHHHHHH
Confidence            11122334568899999999865

>PLN02253 xanthoxin dehydrogenase

Probab=99.91  E-value=1.7e-22  Score=168.36  Aligned_cols=169  Identities=17%  Similarity=0.109  Sum_probs=129.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+.+......++.++++|++|++++.++++  
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   88 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQD--------DLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFT   88 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999876        3333222111223468899999999999888876  


Q ss_pred             -----CCCEEEEccccCCCC-------CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 -----GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                           ++|+|||+||.....       ..+.++.++++|+.++.++++++.+    .+ .+++|++||..+..+.+.   
T Consensus        89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~---  164 (280)
T PLN02253         89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGGLG---  164 (280)
T ss_pred             HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccCCC---
Confidence                 589999999975321       1122348899999999998887754    23 468999999765433211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                         ...|+.||.+.|.+.+.++.+.   ++++++++||.+.++..
T Consensus       165 -------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~  206 (280)
T PLN02253        165 -------------------PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALA  206 (280)
T ss_pred             -------------------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccc
Confidence                               2369999999999999887764   79999999999998864

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.1e-23  Score=168.94  Aligned_cols=167  Identities=20%  Similarity=0.210  Sum_probs=128.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      +++++||||+|+||++++++|+++|++|++++|+.        +....+. .+.... ++.++.+|+++++++.++++. 
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~   72 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRT--------DALQAFAARLPKAA-RVSVYAADVRDADALAAAAADF   72 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999986        4443332 222222 688999999999998887653 


Q ss_pred             ------CCEEEEccccCCCC---C-C--ChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCccc
Q 025660           83 ------CTGVLHVATPVDFE---D-K--EPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        83 ------~d~vih~a~~~~~~---~-~--~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            +|++||+||.....   . .  +..+..+++|+.++.++++    .+++.+ .++||++||...+.+.+.    
T Consensus        73 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~~----  147 (257)
T PRK07024         73 IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLPG----  147 (257)
T ss_pred             HHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCC----
Confidence                  79999999975431   1 1  2235789999999988777    444555 679999999776543221    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                        ...|+.||...+.+.+.++.+   +++++++++||.+.++..
T Consensus       148 ------------------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  189 (257)
T PRK07024        148 ------------------AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMT  189 (257)
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchh
Confidence                              346999999999998887643   589999999999999854

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.7e-22  Score=165.17  Aligned_cols=168  Identities=20%  Similarity=0.162  Sum_probs=128.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+.        +..+.+.+..  +.++.++.+|+++.+++.++++  
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   74 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDP--------ASLEAARAEL--GESALVIRADAGDVAAQKALAQAL   74 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH--------HHHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHH
Confidence            457999999999999999999999999999999876        4333332111  2357789999999987766654  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCC
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                           ++|+|||+||.....     ..+..+..+++|+.++.++++++.+. ...+++|++||....++.+         
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~---------  145 (249)
T PRK06500         75 AEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP---------  145 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC---------
Confidence                 579999999975431     11223478999999999999999763 1135788888865443321         


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                   ..+.|+.+|...|.+++.++.+.   +++++++|||.+++|..
T Consensus       146 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~  188 (249)
T PRK06500        146 -------------NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLY  188 (249)
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHH
Confidence                         13579999999999998877653   89999999999999853

>PRK06128 oxidoreductase; Provisional

Probab=99.90  E-value=1.9e-22  Score=169.69  Aligned_cols=173  Identities=13%  Similarity=0.116  Sum_probs=130.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++..++..     . ...+.+ ..+...+.++.++.+|+++++++.++++ 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  127 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEE-----E-QDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVER  127 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcc-----h-HHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHH
Confidence            3479999999999999999999999999988877541     0 111111 1112223467889999999998887765 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccC
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                            ++|+||||||....      ...+.++..+++|+.++.++++.+.+. ...++||++||..++.+...      
T Consensus       128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~------  201 (300)
T PRK06128        128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT------  201 (300)
T ss_pred             HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC------
Confidence                  57999999996422      112234589999999999999999764 11369999999876543211      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                      ...|+.||.+.+.+++.++.+   +|+++++|+||.+.+|...
T Consensus       202 ----------------~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~  244 (300)
T PRK06128        202 ----------------LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQP  244 (300)
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcc
Confidence                            246999999999999988776   4899999999999999753

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=1.1e-22  Score=166.66  Aligned_cols=208  Identities=15%  Similarity=0.008  Sum_probs=143.7

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhh-hhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+++++|||||+|+||++++++|+++|++|++..|+..       +.. ..+......+.++..+.+|+++++++.++++
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   76 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRA-------EEMNETLKMVKENGGEGIGVLADVSTREGCETLAK   76 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCh-------HHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHH
Confidence            35689999999999999999999999999988776531       121 1222222223356788999999998877765


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccC
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                             ++|+|||+||....     ...+.++..+.+|+.++.++++.+.+. ...++||++||..++.+.        
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  148 (252)
T PRK06077         77 ATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA--------  148 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC--------
Confidence                   57999999997433     111223477899999999999988764 213689999998764322        


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccc
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI  226 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (249)
                                    .+.+.|+.+|...+.+++.++.+.  ++++.+++||.+.++..... ............       
T Consensus       149 --------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~-~~~~~~~~~~~~-------  206 (252)
T PRK06077        149 --------------YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESL-FKVLGMSEKEFA-------  206 (252)
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhh-hhcccccHHHHH-------
Confidence                          124579999999999999888765  79999999999988753211 000000000000       


Q ss_pred             cccccccccchhhHHHhhhhc
Q 025660          227 CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ........+++++|+++++.+
T Consensus       207 ~~~~~~~~~~~~~dva~~~~~  227 (252)
T PRK06077        207 EKFTLMGKILDPEEVAEFVAA  227 (252)
T ss_pred             HhcCcCCCCCCHHHHHHHHHH
Confidence            011123468999999999765

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.9e-23  Score=170.47  Aligned_cols=207  Identities=20%  Similarity=0.141  Sum_probs=142.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +.+++|||||+|+||++++++|+++|++|++++|+.        +..+.+...... .++.++.+|++|++++.++++  
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~--------~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   80 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSE--------AALAATAARLPG-AKVTATVADVADPAQVERVFDTA   80 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHhc-CceEEEEccCCCHHHHHHHHHHH
Confidence            457999999999999999999999999999999986        333333221111 156889999999998887765  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cCCc-ceEEEEcccceeeccCCCcc
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTV-KRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~-~~~v~~SS~~~~~~~~~~~~  145 (249)
                           ++|+|||+||....      ...+..+..++.|+.++.++++.+.+    .+ . ++|+++||.....+.+    
T Consensus        81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~~~----  155 (264)
T PRK12829         81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLGYP----  155 (264)
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccCCC----
Confidence                 58999999997622      11122348899999999998887743    33 3 6788888865432211    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.+|.+.|.+++.++.+   .+++++++|||+++||........    ..... +..
T Consensus       156 ------------------~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~----~~~~~-~~~  212 (264)
T PRK12829        156 ------------------GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEA----RAQQL-GIG  212 (264)
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhh----hhhcc-CCC
Confidence                              1246999999999999888765   389999999999999875322110    00000 000


Q ss_pred             ccc----ccccccccccchhhHHHhhhhc
Q 025660          223 KLK----ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~----~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ...    .........+++++|++.++.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  241 (264)
T PRK12829        213 LDEMEQEYLEKISLGRMVEPEDIAATALF  241 (264)
T ss_pred             hhHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            000    0111233468999999988754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.2e-22  Score=166.03  Aligned_cols=201  Identities=20%  Similarity=0.165  Sum_probs=143.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      +++|||||+|+||++++++|+++|++|++++|+.        ...+.+ ..+...+.++.++.+|+++++++.++++   
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   73 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNE--------TRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAV   73 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999999999986        332222 2222223468889999999998888776   


Q ss_pred             ----CCCEEEEccccCCCC------CCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ----GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                          ++|+|||+||.....      ..+.....+++|+.++.++++.+.+.  ...++||++||..++.+..        
T Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  145 (263)
T PRK06181         74 ARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP--------  145 (263)
T ss_pred             HHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC--------
Confidence                579999999975431      11123467999999999999988642  1147999999987653321        


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccc
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI  226 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (249)
                                    +...|+.+|...+.+.+.++.+   .++++++++||.+.++........         .+. .. .
T Consensus       146 --------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------~~~-~~-~  200 (263)
T PRK06181        146 --------------TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG---------DGK-PL-G  200 (263)
T ss_pred             --------------CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc---------ccc-cc-c
Confidence                          1357999999999988877654   489999999999988764321100         011 11 1


Q ss_pred             cccccccccchhhHHHhhhhc
Q 025660          227 CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .......++++.+|+|.++.+
T Consensus       201 ~~~~~~~~~~~~~dva~~i~~  221 (263)
T PRK06181        201 KSPMQESKIMSAEECAEAILP  221 (263)
T ss_pred             cccccccCCCCHHHHHHHHHH
Confidence            111223478999999998765

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.6e-22  Score=166.55  Aligned_cols=169  Identities=19%  Similarity=0.066  Sum_probs=127.2

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..+++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+....   .++.++.+|+++++++.+++
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~   69 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDE--------ALAKETAAEL---GLVVGGPLDVTDPASFAAFL   69 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh---ccceEEEccCCCHHHHHHHH
Confidence            566678999999999999999999999999999999987        4444332211   14678999999999877766


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|++||+||....     ...+..+..+++|+.++.++++.+.    +.+ .++||++||..++.+.+   
T Consensus        70 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---  145 (273)
T PRK07825         70 DAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVP---  145 (273)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCC---
Confidence            5       47999999997543     1122334788999998888776654    445 67999999976543321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                         ....|+.||...+.+.+.+..+   .|+++++|+||.+.++..
T Consensus       146 -------------------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~  188 (273)
T PRK07825        146 -------------------GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI  188 (273)
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh
Confidence                               1356999999887776665544   489999999999877653

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=167.58  Aligned_cols=165  Identities=18%  Similarity=0.186  Sum_probs=129.1

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+ ++++++||||+|+||++++++|+++|++|++++|+.        +....       ..+++++.+|++|++++.+++
T Consensus         1 m~-~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~--------~~~~~-------~~~~~~~~~D~~d~~~~~~~~   64 (270)
T PRK06179          1 MS-NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNP--------ARAAP-------IPGVELLELDVTDDASVQAAV   64 (270)
T ss_pred             CC-CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCh--------hhccc-------cCCCeeEEeecCCHHHHHHHH
Confidence            44 456899999999999999999999999999999986        22211       135788999999999998888


Q ss_pred             cC-------CCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           81 AG-------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~~-------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +.       +|+||||||.....     ..+..+..+++|+.++.++++.+    ++.+ .++||++||..++.+.+   
T Consensus        65 ~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---  140 (270)
T PRK06179         65 DEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAP---  140 (270)
T ss_pred             HHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCC---
Confidence            73       69999999975431     11223478999999988888875    4455 68999999976543221   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         ....|+.+|...+.+.+.++.+   +|+++++++||.+.++...
T Consensus       141 -------------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~  184 (270)
T PRK06179        141 -------------------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA  184 (270)
T ss_pred             -------------------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence                               1357999999999888877654   5899999999999998654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.90  E-value=3.4e-22  Score=169.83  Aligned_cols=190  Identities=18%  Similarity=0.140  Sum_probs=129.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+|+||.+++++|+++|++|++++|+.        ++.+.+ .++.....++.++.+|+++.+++.++++ 
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   76 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNL--------KKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDD   76 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHH
Confidence            567899999999999999999999999999999986        333322 2222223468889999999999888775 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cCC-cceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGT-VKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~-~~~~v~~SS~~~~~~~~~~~  144 (249)
                            ++|+|||+||....      ...+..+..+.+|+.|+.+|++.+.+    .+. .++||++||...++......
T Consensus        77 ~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~  156 (322)
T PRK07453         77 FRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGK  156 (322)
T ss_pred             HHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCc
Confidence                  38999999996432      11123347899999999988887764    221 25999999987543211100


Q ss_pred             cccCC--C--CC--CchhH-------hhhcCCCCchHHHHHHHHHHHHHHHHHHc----CCcEEEeecCeEeCC
Q 025660          145 DMMDE--T--FW--SDVDY-------IRKLDSWGKSYAISKTLTERAALEFAEEH----GLDLVTLIPSMVVGP  201 (249)
Q Consensus       145 ~~~~e--~--~~--~~~~~-------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~vrp~~v~g~  201 (249)
                      .+.++  +  ..  ....+       ......|...|+.||.+.+.+.+.+++.+    |++++++|||+|++.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        157 IPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             cCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence            01110  0  00  00000       00112345789999998887777776653    799999999999753

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4e-22  Score=163.18  Aligned_cols=168  Identities=19%  Similarity=0.164  Sum_probs=129.3

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++++++||||+|+||++++++|+++|++|++++|+.        ...+.+ .++.....+..++.+|+++.+++.++++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   75 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINA--------EGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMAD   75 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            3568899999999999999999999999999999986        332222 1111112356789999999998877765


Q ss_pred             -------CCCEEEEccccCCC--------CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCC
Q 025660           82 -------GCTGVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        82 -------~~d~vih~a~~~~~--------~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~  142 (249)
                             .+|+|||+||....        ...+..+..+.+|+.++.++++++.+.    + .++||++||..++.+   
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~---  151 (250)
T PRK07774         76 ATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWLY---  151 (250)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccCC---
Confidence                   57999999997531        111223467899999999998888753    3 469999999775421   


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                            .+.|+.||.+.+.+++.+++++   ++++++++||.+.++...
T Consensus       152 ----------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  194 (250)
T PRK07774        152 ----------------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATR  194 (250)
T ss_pred             ----------------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccc
Confidence                                  2469999999999999987764   799999999999888754

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.90  E-value=1.2e-22  Score=166.29  Aligned_cols=169  Identities=21%  Similarity=0.243  Sum_probs=129.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +....+. .+.....++.++.+|+++.++++++++ 
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   73 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNR--------EAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAA   73 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999886        3333221 112223468899999999998888875 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+|||+|+....     ...+.++..+++|+.++.++++.+.    +.+ .++||++||..++.+...    
T Consensus        74 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~----  148 (250)
T TIGR03206        74 AEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSG----  148 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCC----
Confidence                  48999999986432     1112224679999999999888775    344 579999999876543321    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                        ...|+.+|.+.+.+.+.++.+.   +++++++|||.++++..
T Consensus       149 ------------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~  190 (250)
T TIGR03206       149 ------------------EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALL  190 (250)
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhH
Confidence                              3469999998888888877653   89999999999999854

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.90  E-value=6.7e-22  Score=161.72  Aligned_cols=206  Identities=17%  Similarity=0.105  Sum_probs=144.8

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..+++++|||||+|+||++++++|+++|++|++++|+..      .+..+.+...   +.++.++.+|+++++++.+++
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~------~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~   71 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP------SETQQQVEAL---GRRFLSLTADLSDIEAIKALV   71 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH------HHHHHHHHhc---CCceEEEECCCCCHHHHHHHH
Confidence            3446789999999999999999999999999999998651      1112222222   246789999999999888776


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|++||+||.....     ..+.++..+++|+.++.++++.+.+.    +..+++|++||...+.+...  
T Consensus        72 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--  149 (248)
T TIGR01832        72 DSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR--  149 (248)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC--
Confidence            5       489999999975431     11233477899999999988887542    21469999999876533211  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                          ...|+.+|.+.+.+.+.++.+.   ++++++++||.+.++........ ... .....  
T Consensus       150 --------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~-~~~~~--  205 (248)
T TIGR01832       150 --------------------VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD-EDR-NAAIL--  205 (248)
T ss_pred             --------------------CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC-hHH-HHHHH--
Confidence                                2359999999999999888774   89999999999998864321111 000 00100  


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            .......|...+|+|.++.|
T Consensus       206 ------~~~~~~~~~~~~dva~~~~~  225 (248)
T TIGR01832       206 ------ERIPAGRWGTPDDIGGPAVF  225 (248)
T ss_pred             ------hcCCCCCCcCHHHHHHHHHH
Confidence                  11123467888888888765

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.7e-22  Score=166.54  Aligned_cols=204  Identities=14%  Similarity=0.109  Sum_probs=145.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       ...+.+ ..+...+.++.++.+|+++.+++.++++ 
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~  117 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH-------EDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEE  117 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc-------hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999998751       111111 1111223467889999999998888775 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccC
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                            .+|+|||+||....      ...+.+...+++|+.++.++++++.+. ...++||++||..++.+...      
T Consensus       118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~------  191 (290)
T PRK06701        118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET------  191 (290)
T ss_pred             HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC------
Confidence                  47999999997432      111223478999999999999998763 21469999999876543321      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccc
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK  225 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (249)
                                      ...|+.+|.+.+.+++.++.+.   +++++.|+||.++++.......   .....        .
T Consensus       192 ----------------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~---~~~~~--------~  244 (290)
T PRK06701        192 ----------------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD---EEKVS--------Q  244 (290)
T ss_pred             ----------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC---HHHHH--------H
Confidence                            2359999999999998887764   8999999999999986432211   01111        1


Q ss_pred             ccccccccccchhhHHHhhhhc
Q 025660          226 ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +........+.+.+|+++++.|
T Consensus       245 ~~~~~~~~~~~~~~dva~~~~~  266 (290)
T PRK06701        245 FGSNTPMQRPGQPEELAPAYVF  266 (290)
T ss_pred             HHhcCCcCCCcCHHHHHHHHHH
Confidence            1222344567888899888765

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4e-22  Score=163.06  Aligned_cols=201  Identities=20%  Similarity=0.197  Sum_probs=144.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++||||+|+||++++++|+++|++|++++|++        ++...+ ..+.....++.++.+|+++++++.++++  
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLA--------AEARELAAALEAAGGRAHAIAADLADPASVQRFFDAA   78 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            48899999999999999999999999999998876        333322 2222223468899999999999888774  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||++|....     ...+..+..+..|+.++.++++.+.+.    + .++||++||...+.+...     
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~-----  152 (250)
T PRK12939         79 AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALWGAPK-----  152 (250)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhccCCCC-----
Confidence                 58999999997543     111223467889999999998887643    2 469999999765433211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                       ...|+.+|...+.+++.++.+   .+++++.++||.+.++........   ......      
T Consensus       153 -----------------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~------  206 (250)
T PRK12939        153 -----------------LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPAD---ERHAYY------  206 (250)
T ss_pred             -----------------cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCCh---HHHHHH------
Confidence                             246999999999999887654   479999999999988764321110   111111      


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ........+++.+|++.++.|
T Consensus       207 --~~~~~~~~~~~~~dva~~~~~  227 (250)
T PRK12939        207 --LKGRALERLQVPDDVAGAVLF  227 (250)
T ss_pred             --HhcCCCCCCCCHHHHHHHHHH
Confidence              112334567889999988765

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=4e-22  Score=163.21  Aligned_cols=203  Identities=15%  Similarity=0.109  Sum_probs=140.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEE-EcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+++++||||+|+||++++++|+++|++|+++ .|+.        ++.+.+ +.....+.++.++.+|++|++++.++++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSR--------KAAEETAEEIEALGRKALAVKANVGDVEKIKEMFA   74 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            45789999999999999999999999998764 5655        332222 1122223467889999999998888776


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             .+|+|||+||.....     ..+..+..+.+|+.++.++++++.+.    + .++||++||...+.+.+    
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~----  149 (250)
T PRK08063         75 QIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYLE----  149 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCC----
Confidence                   479999999865431     11222357889999999988888653    3 56999999976432211    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.+|.+.+.+++.++.+   .++++++++||.+.++..... +... .+........
T Consensus       150 ------------------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~-~~~~-~~~~~~~~~~  209 (250)
T PRK08063        150 ------------------NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHF-PNRE-ELLEDARAKT  209 (250)
T ss_pred             ------------------CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhc-cCch-HHHHHHhcCC
Confidence                              1357999999999999887665   489999999999988764321 1111 1111111111


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                              ....++..+|++.++.|
T Consensus       210 --------~~~~~~~~~dva~~~~~  226 (250)
T PRK08063        210 --------PAGRMVEPEDVANAVLF  226 (250)
T ss_pred             --------CCCCCcCHHHHHHHHHH
Confidence                    11246888899888754

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.6e-22  Score=163.75  Aligned_cols=200  Identities=19%  Similarity=0.219  Sum_probs=144.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++++||||+|+||+++++.|+++|++|++++|+.        +..+.+....    +..++.+|+++.+++.++++  
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~--------~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~   75 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA--------AALDRLAGET----GCEPLRLDVGDDAAIRAALAAA   75 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh----CCeEEEecCCCHHHHHHHHHHh
Confidence            347999999999999999999999999999999987        4444333221    24678999999998888886  


Q ss_pred             -CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 -GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 -~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                       .+|+|||+||.....     ..+..+..+.+|+.++.++++++.+.    +..++||++||...+++...         
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------  146 (245)
T PRK07060         76 GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD---------  146 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC---------
Confidence             489999999975431     11223467889999999999888653    11368999999876543211         


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICC  228 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (249)
                                   ...|+.+|...+.+++.++.+   .+++++.+|||.++++.......... ....         +..
T Consensus       147 -------------~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~-~~~~---------~~~  203 (245)
T PRK07060        147 -------------HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQ-KSGP---------MLA  203 (245)
T ss_pred             -------------CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHH-HHHH---------HHh
Confidence                         346999999999999888765   37999999999999987432111100 0000         111


Q ss_pred             cccccccchhhHHHhhhhc
Q 025660          229 VMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       229 ~~~~~~~i~v~d~a~a~~~  247 (249)
                      ......|++.+|++.++.|
T Consensus       204 ~~~~~~~~~~~d~a~~~~~  222 (245)
T PRK07060        204 AIPLGRFAEVDDVAAPILF  222 (245)
T ss_pred             cCCCCCCCCHHHHHHHHHH
Confidence            1223468899999999865

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.7e-22  Score=163.96  Aligned_cols=169  Identities=22%  Similarity=0.260  Sum_probs=128.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +++++|||||+|+||+++++.|+++|++|++++|+.        +..+.+ ..+..  ...++.++.+|+++++++.+++
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNP--------DKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAV   77 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHH
Confidence            458999999999999999999999999999999986        332222 11111  1246788999999999888887


Q ss_pred             c-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCC
Q 025660           81 A-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      +       .+|++||+||....      ...+.....+++|+.++.++++.+.+.    + .++|+++||..++.+.+  
T Consensus        78 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~--  154 (276)
T PRK05875         78 DAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNTHR--  154 (276)
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCCCC--
Confidence            6       57999999986421      111223477889999999998876543    3 46899999977532211  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                          +.+.|+.+|...|.+++.++.+.   +++++++|||.+.++..
T Consensus       155 --------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~  197 (276)
T PRK05875        155 --------------------WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLV  197 (276)
T ss_pred             --------------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccc
Confidence                                24579999999999999887664   69999999999988764

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.2e-22  Score=162.22  Aligned_cols=175  Identities=19%  Similarity=0.184  Sum_probs=131.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+|+||+++++.|+++|++|++++|...    +..+....+ .+....+.++.++.+|+++++++.++++ 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPM----RGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccc----ccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999887531    111222222 1222223468899999999998888774 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH-----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL-----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|.|||+||....     ...+.++..+.+|+.++.++++++.     +.+ .++||++||..++.+..    
T Consensus        81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----  155 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNR----  155 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCC----
Confidence                  48999999997652     1112234788999999999999987     334 57999999987654321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                        +...|+.+|...+.+++.++.+   .+++++++|||.+.++....
T Consensus       156 ------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~  200 (249)
T PRK12827        156 ------------------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN  200 (249)
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc
Confidence                              1346999999999888887665   38999999999999987543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.90  E-value=6.8e-22  Score=160.72  Aligned_cols=165  Identities=18%  Similarity=0.150  Sum_probs=129.2

Q ss_pred             CCCCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +.+.++++||||+|+||++++++|+++|+ +|++++|+.        ++...      ...++.++.+|+.+++++.+++
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~--------~~~~~------~~~~~~~~~~D~~~~~~~~~~~   68 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP--------ESVTD------LGPRVVPLQLDVTDPASVAAAA   68 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh--------hhhhh------cCCceEEEEecCCCHHHHHHHH
Confidence            34567999999999999999999999999 999999987        32221      2236889999999999999888


Q ss_pred             c---CCCEEEEcccc-CCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           81 A---GCTGVLHVATP-VDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        81 ~---~~d~vih~a~~-~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                      +   .+|+|||+||. ...     ...+.....+++|+.++..+++++.+    .+ .++||++||...+.+..      
T Consensus        69 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~------  141 (238)
T PRK08264         69 EAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFP------  141 (238)
T ss_pred             HhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCC------
Confidence            7   47999999997 222     11222347788999999999988753    34 57899999977543221      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                      +...|+.+|...+.+.+.++.+   .+++++++|||.+.++..
T Consensus       142 ----------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~  184 (238)
T PRK08264        142 ----------------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMA  184 (238)
T ss_pred             ----------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccc
Confidence                            2357999999999998887765   389999999999988864

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.4e-22  Score=162.75  Aligned_cols=172  Identities=15%  Similarity=0.135  Sum_probs=126.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++|||||+|+||++++++|+++|+.|++..++..       +....+ ..+...+.++.++.+|++|.+++.++++  
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNR-------DAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAV   74 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCH-------HHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHH
Confidence            458999999999999999999999999887765431       222222 1122223457789999999998888876  


Q ss_pred             -----CCCEEEEccccCCCC------CCChHHHhhhhHHhHHHHHHHHHHhcC------CcceEEEEcccceeeccCCCc
Q 025660           82 -----GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKSG------TVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~t~~l~~~~~~~~------~~~~~v~~SS~~~~~~~~~~~  144 (249)
                           .+|+|||+||.....      ..+.++..+++|+.++.++++.+.+.-      ..++||++||..++++.+.  
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--  152 (248)
T PRK06123         75 DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG--  152 (248)
T ss_pred             HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--
Confidence                 579999999975321      112234789999999999888776431      1247999999866543311  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                         ....|+.+|...+.+++.++.+.   +++++++|||.++||...
T Consensus       153 -------------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        153 -------------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             -------------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence                               01259999999999998887764   899999999999999643

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.2e-22  Score=163.58  Aligned_cols=200  Identities=19%  Similarity=0.167  Sum_probs=143.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ..........  ..++..+.+|+++++++.++++  
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   83 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE--------DVAEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAV   83 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHH
Confidence            457999999999999999999999999999999986        2222222221  2356789999999998888765  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||+||.....     ..+.++..+.+|+.++.++++.+.+.    + .++||++||.....+.+.     
T Consensus        84 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~-----  157 (255)
T PRK06841         84 ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALER-----  157 (255)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCCCC-----
Confidence                 479999999975431     11223468999999999999987653    4 579999999765433211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                       ...|+.+|.+.+.+.+.++.+   .+++++.|+||.+.++........   .....       
T Consensus       158 -----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---~~~~~-------  210 (255)
T PRK06841        158 -----------------HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG---EKGER-------  210 (255)
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch---hHHHH-------
Confidence                             246999999998888887776   389999999999988864321111   00111       


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       +........+.+.+|+++++.|
T Consensus       211 -~~~~~~~~~~~~~~~va~~~~~  232 (255)
T PRK06841        211 -AKKLIPAGRFAYPEEIAAAALF  232 (255)
T ss_pred             -HHhcCCCCCCcCHHHHHHHHHH
Confidence             1111223457788899888765

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=7.5e-22  Score=162.10  Aligned_cols=170  Identities=12%  Similarity=0.090  Sum_probs=130.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++++|||||+|+||++++++|+++|++|++++|+.        ++...+ .++...+.++..+.+|++|++++.++++ 
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITA--------ERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEH   79 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCH--------HHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999986        333332 2222223457788999999998888775 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+|||+||....     ...+.++.++++|+.++..+++.+.+    .+ .++||++||.....+.+     
T Consensus        80 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----  153 (254)
T PRK08085         80 IEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGRD-----  153 (254)
T ss_pred             HHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCCC-----
Confidence                  47999999997532     11233347899999998888887754    33 57999999975432211     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                       +...|+.+|.+.+.+++.++.+   +|+++++|+||.+.++...
T Consensus       154 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~  197 (254)
T PRK08085        154 -----------------TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTK  197 (254)
T ss_pred             -----------------CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchh
Confidence                             1346999999999999988765   3899999999999998653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.89  E-value=9.4e-22  Score=160.41  Aligned_cols=174  Identities=18%  Similarity=0.200  Sum_probs=129.0

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+..++++|||||+|+||++++++|+++|++|+++.|+..       .....+ ........++.++.+|+++++++.++
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE-------AGAEALVAEIGALGGKALAVQGDVSDAESVERA   73 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch-------hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            5556789999999999999999999999999988888761       111111 11222234678899999999988877


Q ss_pred             Hc-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|+|||+||.....     ..+..+..+..|+.++.++++.+.+.    + .++||++||....++... 
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~~-  151 (248)
T PRK05557         74 VDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNPG-  151 (248)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCCC-
Confidence            65       579999999975431     11222367889999999999888753    3 568999999765433211 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                           ...|+.+|...+.+++.++.+   .++++++++||.+.++...
T Consensus       152 ---------------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~  194 (248)
T PRK05557        152 ---------------------QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD  194 (248)
T ss_pred             ---------------------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc
Confidence                                 346999999999888776654   3799999999998776543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=8.8e-22  Score=161.38  Aligned_cols=204  Identities=17%  Similarity=0.124  Sum_probs=141.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+.+++++|||||+|+||+++++.|+++|++|+++.++..       +..+.+....  ..++.++.+|+++++++.+++
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~-------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   71 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE-------DAAEALADEL--GDRAIALQADVTDREQVQAMF   71 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCH-------HHHHHHHHHh--CCceEEEEcCCCCHHHHHHHH
Confidence            6667789999999999999999999999999988766431       2333332211  136788999999999888877


Q ss_pred             cC--------CCEEEEccccCC---------C--CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEccccee
Q 025660           81 AG--------CTGVLHVATPVD---------F--EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAV  137 (249)
Q Consensus        81 ~~--------~d~vih~a~~~~---------~--~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~  137 (249)
                      +.        +|++||+|+...         .  ...+.++..+++|+.++.++++.+.+    .+ .++||++||....
T Consensus        72 ~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  150 (253)
T PRK08642         72 ATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQ  150 (253)
T ss_pred             HHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCcccc
Confidence            53        899999998531         0  01122346799999999999988863    33 5799999996421


Q ss_pred             eccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHH
Q 025660          138 FYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSS  214 (249)
Q Consensus       138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~  214 (249)
                      ..                      ..|.+.|+.||.+.+.+++.++.+   ++++++.|+||.+.++......+.   ..
T Consensus       151 ~~----------------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~  205 (253)
T PRK08642        151 NP----------------------VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPD---EV  205 (253)
T ss_pred             CC----------------------CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCH---HH
Confidence            10                      012457999999999999998876   379999999999988743221111   11


Q ss_pred             HHHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          215 LALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .......        .....+...+|++.++.|
T Consensus       206 ~~~~~~~--------~~~~~~~~~~~va~~~~~  230 (253)
T PRK08642        206 FDLIAAT--------TPLRKVTTPQEFADAVLF  230 (253)
T ss_pred             HHHHHhc--------CCcCCCCCHHHHHHHHHH
Confidence            1111111        122346777888887765

>PRK08589 short chain dehydrogenase; Validated

Probab=99.89  E-value=1e-21  Score=162.99  Aligned_cols=170  Identities=15%  Similarity=0.125  Sum_probs=128.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ...+...++...+.++..+.+|+++++++.++++  
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   76 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAE--------AVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEI   76 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcH--------HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999874        3222222222223468899999999998887765  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccccC
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                           .+|++|||||....      ...+.++..+.+|+.++..+++.+.+.  ...++||++||...+.+...      
T Consensus        77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  150 (272)
T PRK08589         77 KEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLY------  150 (272)
T ss_pred             HHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCC------
Confidence                 47999999997532      111233478889999988777766542  11369999999775432211      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                      ...|+.||.+.+.+++.++.+.   |++++.|.||.|.++..
T Consensus       151 ----------------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  192 (272)
T PRK08589        151 ----------------RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLV  192 (272)
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchh
Confidence                            3469999999999998887653   79999999999998864

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.7e-22  Score=160.89  Aligned_cols=166  Identities=25%  Similarity=0.298  Sum_probs=126.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.. .+.++..  ...+.+.+|++|.+++.++++ 
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~   75 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGA--------APLSQTLPGVPA--DALRIGGIDLVDPQAARRAVDE   75 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh--------HhHHHHHHHHhh--cCceEEEeecCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        2221 1222211  245778899999998887776 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+|||+++.....     ..+..+..+..|+.++.++++++.+    .+ .++||++||..++.+..     
T Consensus        76 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-----  149 (239)
T PRK12828         76 VNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGP-----  149 (239)
T ss_pred             HHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCC-----
Confidence                  479999999865321     1122236688999999998888753    34 78999999987653321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                       +...|+.+|...+.+++.++..   .+++++++|||.++++.
T Consensus       150 -----------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~  191 (239)
T PRK12828        150 -----------------GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP  191 (239)
T ss_pred             -----------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence                             1356999999888888776654   48999999999999984

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-21  Score=161.33  Aligned_cols=171  Identities=15%  Similarity=0.123  Sum_probs=130.0

Q ss_pred             CC-CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 ME-EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |. .++++++||||+|+||++++++|+++|++|++++|+.        +..+.+....  +.++.++.+|+++.+++.++
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~   70 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA--------DNGAAVAASL--GERARFIATDITDDAAIERA   70 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--CCeeEEEEecCCCHHHHHHH
Confidence            54 3458999999999999999999999999999999987        4333332211  23678899999999988887


Q ss_pred             Hc-------CCCEEEEccccCCC----CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccc
Q 025660           80 IA-------GCTGVLHVATPVDF----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      ++       .+|++|||||....    ...+.++..+++|+.++..+++.+.+.  +..++||++||.....+...    
T Consensus        71 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----  146 (261)
T PRK08265         71 VATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG----  146 (261)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC----
Confidence            76       47999999997432    112223478899999998888876542  22479999999776433211    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                        ...|+.+|...+.+.+.++.+.   ++++++|+||.+.++..
T Consensus       147 ------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~  188 (261)
T PRK08265        147 ------------------RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVM  188 (261)
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhh
Confidence                              3469999999999988887653   79999999999888753

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=161.00  Aligned_cols=205  Identities=14%  Similarity=0.087  Sum_probs=139.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|+++||||+|+||++++++|+++|++|++..++..       +..+. ..++...+.....+.+|+++.+++..+++ 
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK-------EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSS   75 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCH-------HHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHH
Confidence            4679999999999999999999999999988754320       22221 12222223456788999999876654432 


Q ss_pred             ------------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCC
Q 025660           82 ------------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 ------------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~  143 (249)
                                  .+|++|||||....     ...+.++.++++|+.++..+++.+.+.- ..++||++||..++.+.+  
T Consensus        76 ~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--  153 (252)
T PRK12747         76 LDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP--  153 (252)
T ss_pred             HHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC--
Confidence                        58999999997432     1112235788999999999998876641 146999999987643221  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          ....|+.||.+.+.+.+.++.+   +|+++++|.||.|.++........  ........ 
T Consensus       154 --------------------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~--~~~~~~~~-  210 (252)
T PRK12747        154 --------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD--PMMKQYAT-  210 (252)
T ss_pred             --------------------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC--HHHHHHHH-
Confidence                                1346999999999988887665   389999999999999864321111  01111100 


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                             .......+...+|++.++.|
T Consensus       211 -------~~~~~~~~~~~~dva~~~~~  230 (252)
T PRK12747        211 -------TISAFNRLGEVEDIADTAAF  230 (252)
T ss_pred             -------hcCcccCCCCHHHHHHHHHH
Confidence                   01123346778888888765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.89  E-value=1.1e-21  Score=160.67  Aligned_cols=165  Identities=18%  Similarity=0.226  Sum_probs=125.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc----
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   81 (249)
                      |+++||||+|+||+++++.|+++|++|++++|++        ++.+.+....  +.++.++.+|+++.+++.++++    
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~   70 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ--------ERLQELKDEL--GDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh--ccceEEEEecCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999987        4444443221  2357889999999998887765    


Q ss_pred             ---CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ---GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ---~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                         ++|+|||+||....      ...+..+..+++|+.++..+++.+    .+.+ .++||++||..+..+..       
T Consensus        71 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-------  142 (248)
T PRK10538         71 EWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYA-------  142 (248)
T ss_pred             HcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCCC-------
Confidence               58999999996421      112233478899999966666655    4455 67999999976432211       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                     +.+.|+.+|...+.+.+.++.+.   ++++++++||.+.|+..
T Consensus       143 ---------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~  185 (248)
T PRK10538        143 ---------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEF  185 (248)
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccccc
Confidence                           13579999999999998887653   79999999999987643

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.89  E-value=6.6e-22  Score=162.31  Aligned_cols=170  Identities=19%  Similarity=0.231  Sum_probs=121.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC-hhhHHHHH-c
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-PDGFDAAI-A   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~~~~~~-~   81 (249)
                      ++|+||||||+|+||++++++|+++||+|+++.|+.        ++...+..   ...+++++.+|+++ .+++.+.+ .
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~   84 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDV--------DKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGD   84 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCH--------HHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhc
Confidence            467999999999999999999999999999999987        33322211   12368899999998 46777777 6


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      ++|+|||+++....  .++. ..+++|..++.++++++.+.+ .++||++||..+|+....  .+..+..    .+    
T Consensus        85 ~~d~vi~~~g~~~~--~~~~-~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~--~~~~~~~----~~----  150 (251)
T PLN00141         85 DSDAVICATGFRRS--FDPF-APWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMG--QILNPAY----IF----  150 (251)
T ss_pred             CCCEEEECCCCCcC--CCCC-CceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcc--cccCcch----hH----
Confidence            89999999886432  1222 345788999999999999888 889999999886542211  1111110    00    


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                      ..+...|..+|..+|.+++.    .+++++++|||+++++.
T Consensus       151 ~~~~~~~~~~k~~~e~~l~~----~gi~~~iirpg~~~~~~  187 (251)
T PLN00141        151 LNLFGLTLVAKLQAEKYIRK----SGINYTIVRPGGLTNDP  187 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHh----cCCcEEEEECCCccCCC
Confidence            00112244567777766543    58999999999999864

>PRK12320 hypothetical protein; Provisional

Probab=99.89  E-value=5.5e-22  Score=180.47  Aligned_cols=170  Identities=16%  Similarity=0.181  Sum_probs=124.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCEE
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGV   86 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   86 (249)
                      +||||||+||||++|+++|+++||+|++++|.+        ...        ....++++.+|++++. +.+++.++|+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~--------~~~--------~~~~ve~v~~Dl~d~~-l~~al~~~D~V   64 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHP--------HDA--------LDPRVDYVCASLRNPV-LQELAGEADAV   64 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCh--------hhc--------ccCCceEEEccCCCHH-HHHHhcCCCEE
Confidence            799999999999999999999999999999876        110        1125788999999985 78888899999


Q ss_pred             EEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCc
Q 025660           87 LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK  166 (249)
Q Consensus        87 ih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~  166 (249)
                      ||+|+....   .    ...+|+.++.+++++|++.+ + ++||+||..   +.+.                        
T Consensus        65 IHLAa~~~~---~----~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~---G~~~------------------------  108 (699)
T PRK12320         65 IHLAPVDTS---A----PGGVGITGLAHVANAAARAG-A-RLLFVSQAA---GRPE------------------------  108 (699)
T ss_pred             EEcCccCcc---c----hhhHHHHHHHHHHHHHHHcC-C-eEEEEECCC---CCCc------------------------
Confidence            999987422   1    22589999999999999988 5 799999852   1100                        


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhhhh
Q 025660          167 SYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       167 ~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~  246 (249)
                      .|.    .+|.++..    ++++++++|++++|||........++..+......++++         .++|++|+++++.
T Consensus       109 ~~~----~aE~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI---------~vIyVdDvv~alv  171 (699)
T PRK12320        109 LYR----QAETLVST----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPI---------RVLHLDDLVRFLV  171 (699)
T ss_pred             ccc----HHHHHHHh----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCce---------EEEEHHHHHHHHH
Confidence            122    25665543    468999999999999965433333444444333223333         3489999999874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=2.3e-21  Score=159.36  Aligned_cols=166  Identities=19%  Similarity=0.129  Sum_probs=124.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|+++||||+|+||++++++|+++|++|+++.++..       +..+.+...     ++.++.+|++|++++.++++  
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~-------~~~~~l~~~-----~~~~~~~Dl~~~~~~~~~~~~~   73 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE-------NEAKELREK-----GVFTIKCDVGNRDQVKKSKEVV   73 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH-------HHHHHHHhC-----CCeEEEecCCCHHHHHHHHHHH
Confidence            4589999999999999999999999999998877651       223333221     46789999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHH----HHHHhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGIL----KSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~----~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++..+.    +.+++.+ .++||++||..++.....     
T Consensus        74 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~-----  147 (255)
T PRK06463         74 EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAAE-----  147 (255)
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCCC-----
Confidence                 47999999997532     112233478999999965554    4444444 579999999775432100     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                      ....|+.||.+.+.+.+.++.+   .++++++++||.+.++..
T Consensus       148 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~  190 (255)
T PRK06463        148 ----------------GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMT  190 (255)
T ss_pred             ----------------CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchh
Confidence                            1346999999999998888765   489999999999987754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=161.60  Aligned_cols=175  Identities=16%  Similarity=0.117  Sum_probs=130.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ ..+...+.++.++.+|++|++++.++++ 
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~   82 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKA--------EELEEAAAHLEALGIDALWIAADVADEADIERLAEE   82 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            458999999999999999999999999999999976        333222 1222223467789999999998876664 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+|||+||....     ...+.++..+++|+.++.++++++.+.    +..++||++||...+++.....  
T Consensus        83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~--  160 (259)
T PRK08213         83 TLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEV--  160 (259)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccc--
Confidence                  47999999996432     112233477889999999999987654    2257999999976554331100  


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                      .+...|+.+|+..+.+++.++.++   ++++++++||.+.++...
T Consensus       161 ----------------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~  205 (259)
T PRK08213        161 ----------------MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR  205 (259)
T ss_pred             ----------------cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh
Confidence                            123579999999999999887753   799999999998877543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.5e-22  Score=162.59  Aligned_cols=167  Identities=21%  Similarity=0.235  Sum_probs=124.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC-CCCCCCeEEEEcCCCChhhHHHHHc-C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAIA-G   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~-~   82 (249)
                      ++++|||||+|+||++++++|+++|++|++++|+.        +....+.+. ...+.++.++.+|++|++++.++++ +
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIA--------PQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCC
Confidence            46899999999999999999999999999999976        333332211 1123357889999999999999887 7


Q ss_pred             CCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccCCCCCC
Q 025660           83 CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (249)
Q Consensus        83 ~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (249)
                      +|+||||||.....     ..+..+..+++|+.++..+.+.+    .+.+ .++||++||..+....+            
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~------------  140 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGP------------  140 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCC------------
Confidence            99999999975431     11223467888998877666544    4455 57999999976433221            


Q ss_pred             chhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                ....|+.||...|.+.+.+..+   +|+++++||||.+..+.
T Consensus       141 ----------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~  182 (257)
T PRK09291        141 ----------FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGF  182 (257)
T ss_pred             ----------CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence                      1346999999999888776554   58999999999886654

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.6e-21  Score=159.13  Aligned_cols=174  Identities=18%  Similarity=0.208  Sum_probs=130.5

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..++++++||||+|+||++++++|+++|++|+++.|+..       .....+ ++....+.++.++.+|+++++++.++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSA-------AAADELVAEIEAAGGRAIAVQADVADAAAVTRL   73 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCH-------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            6667789999999999999999999999999988877651       111111 12222234688999999999998888


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccc
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      ++       ++|+|||+||....     ...+.++..+.+|+.++.++++.+.+. ...++||++||.....+.+     
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----  148 (245)
T PRK12937         74 FDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP-----  148 (245)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC-----
Confidence            76       58999999997542     112223477899999999999888754 2136899999876432211     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       +.+.|+.+|...+.+++.++.+   .++++++++||.+.++..
T Consensus       149 -----------------~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~  191 (245)
T PRK12937        149 -----------------GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELF  191 (245)
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchh
Confidence                             2357999999999999887665   379999999999988763

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.3e-22  Score=160.95  Aligned_cols=166  Identities=20%  Similarity=0.234  Sum_probs=129.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG---   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   82 (249)
                      ++++||||+|+||++++++|+++|++|++++|++        ++.+.+...   ..++.++.+|+++.+++.++++.   
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   70 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQ--------SVLDELHTQ---SANIFTLAFDVTDHPGTKAALSQLPF   70 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHh---cCCCeEEEeeCCCHHHHHHHHHhccc
Confidence            5899999999999999999999999999999987        454444332   23578899999999999999875   


Q ss_pred             -CCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCCCCCch
Q 025660           83 -CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (249)
Q Consensus        83 -~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (249)
                       +|.+||+||.....     ..+.++..+++|+.++.++++.+.+. ...+++|++||.....+.+.             
T Consensus        71 ~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------  137 (240)
T PRK06101         71 IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPR-------------  137 (240)
T ss_pred             CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCC-------------
Confidence             58999999864321     11223478999999999999998863 11358999999764332211             


Q ss_pred             hHhhhcCCCCchHHHHHHHHHHHHHHHHH---HcCCcEEEeecCeEeCCCCC
Q 025660          156 DYIRKLDSWGKSYAISKTLTERAALEFAE---EHGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~vrp~~v~g~~~~  204 (249)
                               ...|+.+|...+.+.+.++.   .+++++++++||.++++...
T Consensus       138 ---------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~  180 (240)
T PRK06101        138 ---------AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTD  180 (240)
T ss_pred             ---------CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC
Confidence                     34699999999999887764   35899999999999998643

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.6e-21  Score=159.00  Aligned_cols=172  Identities=18%  Similarity=0.173  Sum_probs=128.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+..       ...+. ...+...+.++..+.+|+++++++.++++ 
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD-------DGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc-------hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999998751       11121 12222223467889999999998888776 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++.++++|+.++..+++.+.    +.+ .++||++||...+.+....   
T Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~---  155 (254)
T PRK06114         80 TEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGL---  155 (254)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCC---
Confidence                  36999999997543     1122334789999999987777654    344 5799999997754332110   


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       +...|+.+|.+.+.+.+.++.+   +|+++++|+||.+.++..
T Consensus       156 -----------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~  198 (254)
T PRK06114        156 -----------------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMN  198 (254)
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccc
Confidence                             1246999999999888888764   489999999999999864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=2e-21  Score=159.65  Aligned_cols=204  Identities=16%  Similarity=0.079  Sum_probs=144.6

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++++++||||+|+||++++++|+++|++|++++|+.        +....+ .++...+.++.++.+|+++++++.++++
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   80 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA--------ATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFA   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            3568999999999999999999999999999999986        333332 2222233468899999999998887776


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             .+|+|||++|....     ...+.++..+.+|+.++..+++.+.+    .+ .++||++||..+..+.+.   
T Consensus        81 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~---  156 (256)
T PRK06124         81 RIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARAG---  156 (256)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCCC---
Confidence                   36999999997543     11122347799999999998876654    45 679999999765433211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                         ...|+.+|.+.+.+++.++.+   .+++++.|+||.+.++........  .......... 
T Consensus       157 -------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~~~-  214 (256)
T PRK06124        157 -------------------DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD--PAVGPWLAQR-  214 (256)
T ss_pred             -------------------ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC--hHHHHHHHhc-
Confidence                               246999999999888877665   379999999999999864322111  1111111111 


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                             .....+++.+|++.++.|
T Consensus       215 -------~~~~~~~~~~~~a~~~~~  232 (256)
T PRK06124        215 -------TPLGRWGRPEEIAGAAVF  232 (256)
T ss_pred             -------CCCCCCCCHHHHHHHHHH
Confidence                   122347888888888765

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.3e-21  Score=159.61  Aligned_cols=173  Identities=17%  Similarity=0.145  Sum_probs=130.2

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEE-EcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |..+++++|||||+|+||++++++|+++|++|+++ +|+.        +....+ ......+.++.++.+|+++++++.+
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE--------EAAQELLEEIKEEGGDAIAVKADVSSEEDVEN   72 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            55667899999999999999999999999999998 8876        333222 1111223468899999999998888


Q ss_pred             HHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCC
Q 025660           79 AIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      +++       ++|+|||++|....     ...+..+..+.+|+.++.++++.+.+    .+ .++||++||...+++...
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~  151 (247)
T PRK05565         73 LVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGASC  151 (247)
T ss_pred             HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCCC
Confidence            776       68999999997632     11222347889999998888877764    33 578999999776543211


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                            ...|+.+|...+.+++.++.+   .+++++.+|||.+.++...
T Consensus       152 ----------------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~  194 (247)
T PRK05565        152 ----------------------EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWS  194 (247)
T ss_pred             ----------------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccc
Confidence                                  246999999888777776654   3899999999999877543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=158.10  Aligned_cols=193  Identities=19%  Similarity=0.150  Sum_probs=136.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||+++++.|+++ ++|++++|+.        +..+.+....   ..++++.+|++|++++.++++  
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   69 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPA--------ERLDELAAEL---PGATPFPVDLTDPEAIAAAVEQL   69 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCH--------HHHHHHHHHh---ccceEEecCCCCHHHHHHHHHhc
Confidence            3578999999999999999999999 9999999986        4433332111   247889999999999999887  


Q ss_pred             -CCCEEEEccccCCCCC-----CChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 -GCTGVLHVATPVDFED-----KEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 -~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                       ++|.|||++|......     .+.+...+.+|+.+...+.+    .+++.  .+++|++||..++.+..          
T Consensus        70 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~----------  137 (227)
T PRK08219         70 GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANP----------  137 (227)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCC----------
Confidence             5899999999754311     11223668888888555444    44444  36999999987643321          


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-C-CcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-G-LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCV  229 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~-~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (249)
                                  +...|+.+|...+.+++.++... + ++++.++||.+.++.....        ... .+.       .
T Consensus       138 ------------~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--------~~~-~~~-------~  189 (227)
T PRK08219        138 ------------GWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGL--------VAQ-EGG-------E  189 (227)
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhh--------hhh-hcc-------c
Confidence                        13469999999999888876643 5 8999999998766532210        000 011       1


Q ss_pred             ccccccchhhHHHhhhhcc
Q 025660          230 MNRSHTLFVYAIAFAFAFN  248 (249)
Q Consensus       230 ~~~~~~i~v~d~a~a~~~~  248 (249)
                      .....+++.+|++.++.+.
T Consensus       190 ~~~~~~~~~~dva~~~~~~  208 (227)
T PRK08219        190 YDPERYLRPETVAKAVRFA  208 (227)
T ss_pred             cCCCCCCCHHHHHHHHHHH
Confidence            1235689999999998753

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.89  E-value=1.5e-21  Score=159.38  Aligned_cols=170  Identities=18%  Similarity=0.175  Sum_probs=123.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEE-cCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++|||||+|+||++++++|+++|++|+++. |+.        ++... ...+...+..+..+.+|++|++++.++++  
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~   73 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL--------HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAI   73 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCh--------HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHH
Confidence            5899999999999999999999999998754 443        22221 12222223457889999999999888876  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc------CCcceEEEEcccceeeccCCCc
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS------GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                           .+|+|||+||....      ...+..+.++++|+.++.++++.+.+.      +..++||++||..++.+.+.  
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~--  151 (247)
T PRK09730         74 DQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG--  151 (247)
T ss_pred             HHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC--
Confidence                 36899999997422      111223478999999998877766432      11357999999865543211  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         ....|+.+|...+.+++.++.+   .+++++++|||.++||...
T Consensus       152 -------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        152 -------------------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             -------------------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence                               0135999999999988877654   3899999999999999643

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.89  E-value=9.1e-22  Score=162.01  Aligned_cols=169  Identities=15%  Similarity=0.182  Sum_probs=127.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.      ..+.....  ....+.++.++.+|+++.+++.++++  
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~D~~~~~~i~~~~~~~   85 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT------NWDETRRL--IEKEGRKVTFVQVDLTKPESAEKVVKEA   85 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc------HHHHHHHH--HHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999998874      11111111  11223468899999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           .+|++||+||....     ...+.++..+++|+.++..+++.+.    +.+ .+++|++||..++.+...     
T Consensus        86 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~-----  159 (258)
T PRK06935         86 LEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGKF-----  159 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCCC-----
Confidence                 57999999997542     1122334788999999777776654    444 579999999876433211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                       ...|+.+|.+.+.+.+.++.+.   |++++.|+||.+.++..
T Consensus       160 -----------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~  201 (258)
T PRK06935        160 -----------------VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANT  201 (258)
T ss_pred             -----------------chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccch
Confidence                             2469999999999998887753   79999999999998864

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.3e-22  Score=161.55  Aligned_cols=171  Identities=17%  Similarity=0.091  Sum_probs=128.1

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++++++||||+|+||.+++++|+++|++|++++|++        ++.+.+ .++...+.++.++.+|+++++++.++++
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQ--------AELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVA   75 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            3557999999999999999999999999999999987        333332 2222223467889999999998888776


Q ss_pred             -------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             .+|++||+||....      ...+.++..+++|+.++..+++.+    ++.+ .++||++||..++....   
T Consensus        76 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~---  151 (254)
T PRK07478         76 LAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGF---  151 (254)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCC---
Confidence                   58999999997532      111223478999998877765544    4444 57899999976532110   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                        .+...|+.||.+.+.+.+.++.+.   ++++++|+||.+.++..
T Consensus       152 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  195 (254)
T PRK07478        152 ------------------PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMG  195 (254)
T ss_pred             ------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccc
Confidence                              013469999999999988887764   79999999999988854

>PRK06196 oxidoreductase; Provisional

Probab=99.89  E-value=1.5e-21  Score=165.39  Aligned_cols=178  Identities=16%  Similarity=0.058  Sum_probs=127.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++|+||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++    .++.++.+|++|.+++.++++ 
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~--------~~~~~~~~~l----~~v~~~~~Dl~d~~~v~~~~~~   92 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRP--------DVAREALAGI----DGVEVVMLDLADLESVRAFAER   92 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh----hhCeEEEccCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999987        433322 222    136789999999998888774 


Q ss_pred             ------CCCEEEEccccCCC---CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ------GCTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ------~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                            ++|+||||||....   ...+.++..+.+|+.++..+++.+    ++.+ .++||++||............ ..
T Consensus        93 ~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~-~~  170 (315)
T PRK06196         93 FLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDD-PH  170 (315)
T ss_pred             HHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccc-cC
Confidence                  48999999997533   112233478999999976666654    4444 479999999754322111000 00


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      ...+         ..+...|+.||.+.+.+.+.++.+   +|+++++|+||.+.++...
T Consensus       171 ~~~~---------~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~  220 (315)
T PRK06196        171 FTRG---------YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQR  220 (315)
T ss_pred             ccCC---------CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccc
Confidence            0011         112457999999999988887664   4799999999999998653

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.7e-22  Score=162.25  Aligned_cols=168  Identities=19%  Similarity=0.200  Sum_probs=129.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      ||++|||||+|+||++++++|+++|++|++++|+.        +..+.+..... +.+++++.+|+++.+++.++++   
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~   71 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINE--------AGLAALAAELG-AGNAWTGALDVTDRAAWDAALADFA   71 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999987        44443322111 3468899999999998887765   


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+..+..+.+|+.++.++++.+.+    .+ .++||++||..+.++...     
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~-----  145 (260)
T PRK08267         72 AATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPG-----  145 (260)
T ss_pred             HHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCC-----
Confidence                 46999999997543     11122357899999999999887753    33 579999999766544322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                       ...|+.||...+.+.+.++.+   .++++++++||.+.++...
T Consensus       146 -----------------~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~  188 (260)
T PRK08267        146 -----------------LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLD  188 (260)
T ss_pred             -----------------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccc
Confidence                             346999999999988888654   3799999999999877543

>PRK08643 acetoin reductase; Validated

Probab=99.89  E-value=1.1e-21  Score=161.18  Aligned_cols=169  Identities=19%  Similarity=0.212  Sum_probs=127.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +|++|||||+|+||+++++.|+++|++|++++|+.        +....+ .++...+.++.++.+|+++++++.++++  
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   73 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNE--------ETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQV   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            56899999999999999999999999999999986        333322 2222223467889999999998887776  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||.....     ..+..+..+++|+.++..+++.+.+    .+..+++|++||...+.+.+.     
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  148 (256)
T PRK08643         74 VDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE-----  148 (256)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC-----
Confidence                 479999999875431     1122347889999998877776654    222368999999765433211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       ...|+.+|...+.+++.++.+   .|++++.|+||.+.+|..
T Consensus       149 -----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~  190 (256)
T PRK08643        149 -----------------LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMM  190 (256)
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhh
Confidence                             346999999999888887765   489999999999988764

>PRK07985 oxidoreductase; Provisional

Probab=99.88  E-value=8.7e-22  Score=165.24  Aligned_cols=171  Identities=15%  Similarity=0.092  Sum_probs=128.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC-CCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++|||||+|+||++++++|+++|++|++.+|+..      .+..+.+.+. ...+.++.++.+|+++.+++.++++  
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVE------EEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcc------hhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999998876541      0122222211 1223457789999999998877765  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                           ++|++||+||....      ...+.++..+++|+.++..+++++.+. ...++||++||..++.+.+.       
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~-------  195 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH-------  195 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC-------
Confidence                 47999999986421      112223488999999999999988763 11368999999876533211       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                     ...|+.||.+.+.+.+.++.+   +|+++++|+||.|++|..
T Consensus       196 ---------------~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~  237 (294)
T PRK07985        196 ---------------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_pred             ---------------cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence                           246999999999998888776   489999999999999964

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-21  Score=160.06  Aligned_cols=173  Identities=16%  Similarity=0.181  Sum_probs=128.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+. .+...+.++..+.+|+++++++.++++ 
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL--------DALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQ   79 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999986        3333332 222223467889999999998888765 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|++|||||....     ...+.++..+++|+.++..+++++.+    .+..+++|++||..+......    
T Consensus        80 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----  155 (253)
T PRK05867         80 VTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP----  155 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC----
Confidence                  58999999997543     11223347789999999988887753    221357999998654211100    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                      .....|+.+|.+.+.+.+.++.+   +|++++.|+||.+.++...
T Consensus       156 ----------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~  200 (253)
T PRK05867        156 ----------------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE  200 (253)
T ss_pred             ----------------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc
Confidence                            01246999999999998888765   3899999999999888643

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2e-21  Score=161.41  Aligned_cols=164  Identities=17%  Similarity=0.200  Sum_probs=126.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      ||++|||||+|+||++++++|+++|++|++++|+.        +....+...     ++.++.+|+++.+++.++++   
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~-----~~~~~~~Dl~~~~~~~~~~~~~~   67 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKA--------EDVEALAAA-----GFTAVQLDVNDGAALARLAEELE   67 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHC-----CCeEEEeeCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999987        444443321     36788999999998887764   


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                          ++|+|||+||.....     ..+..+..+++|+.++.++++.+.+.   + .+++|++||..++.+.+        
T Consensus        68 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  138 (274)
T PRK05693         68 AEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTP--------  138 (274)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCC--------
Confidence                579999999975431     11223478899999999988887542   3 47899999976543221        


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                    ....|+.+|...+.+.+.++.+   +|+++++++||.|.++...
T Consensus       139 --------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  182 (274)
T PRK05693        139 --------------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFAS  182 (274)
T ss_pred             --------------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccc
Confidence                          1356999999999888777654   5899999999999887543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.88  E-value=1.8e-21  Score=161.90  Aligned_cols=169  Identities=17%  Similarity=0.152  Sum_probs=127.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|+++++++..+++ 
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   80 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQ--------EKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQ   80 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            347899999999999999999999999999999986        333322 2222223467889999999988877765 


Q ss_pred             ------CCCEEEEccccCCCC--------------------CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEE
Q 025660           82 ------GCTGVLHVATPVDFE--------------------DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYT  131 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~--------------------~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~  131 (249)
                            ++|++||+||.....                    ..+.++..+++|+.++..+++.+    ++.+ .++||++
T Consensus        81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~i  159 (278)
T PRK08277         81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINI  159 (278)
T ss_pred             HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence                  589999999954221                    01223477899999887666554    4444 5799999


Q ss_pred             cccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          132 SSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       132 SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                      ||..++.+.+                      +...|+.||.+.+.+++.++.+.   ++++++|+||.+.++..
T Consensus       160 sS~~~~~~~~----------------------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~  212 (278)
T PRK08277        160 SSMNAFTPLT----------------------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQN  212 (278)
T ss_pred             ccchhcCCCC----------------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcch
Confidence            9987643221                      13469999999999998887764   79999999999999864

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1.6e-21  Score=158.61  Aligned_cols=168  Identities=21%  Similarity=0.203  Sum_probs=128.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++||||+|+||++++++|+++|++|++++|+.        +....+ .++...+.++.++.+|+++++++.++++  
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTE--------ENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQL   78 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999986        332222 1222223468889999999999888876  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||+||.....     ..+..+..+++|+.++.++++.+.+    .+ .+++|++||...+++..      
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~------  151 (239)
T PRK07666         79 KNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAA------  151 (239)
T ss_pred             HHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCC------
Confidence                 689999999975431     1122347789999999998887764    33 57899999987654431      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                      +...|+.+|.+.+.+++.++.+   ++++++++|||.+.++..
T Consensus       152 ----------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~  194 (239)
T PRK07666        152 ----------------VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMA  194 (239)
T ss_pred             ----------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcch
Confidence                            1346999999988888777654   489999999999988754

>PRK12743 oxidoreductase; Provisional

Probab=99.88  E-value=2.8e-21  Score=159.00  Aligned_cols=170  Identities=16%  Similarity=0.131  Sum_probs=127.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++|||||+|+||++++++|+++|++|+++.++..       +..+.+ .++...+.++.++.+|+++++++.++++  
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE-------EGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKL   74 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCCh-------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999988876541       222222 2222233468899999999998877765  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           .+|+|||+||.....     ..+.++..+.+|+.++.++++++.+.    +..++||++||.....+.       
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-------  147 (256)
T PRK12743         75 IQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL-------  147 (256)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC-------
Confidence                 479999999975431     11223478999999999999877643    213689999996542211       


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                     .+...|+.+|.+.+.+++.++.+   ++++++.|+||.+++|..
T Consensus       148 ---------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~  191 (256)
T PRK12743        148 ---------------PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMN  191 (256)
T ss_pred             ---------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccc
Confidence                           12357999999999988887764   379999999999999864

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=6.5e-21  Score=154.66  Aligned_cols=165  Identities=18%  Similarity=0.155  Sum_probs=126.0

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh-hhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~~~~~   79 (249)
                      |..++++++||||+|+||++++++|+++|++|++++|+..        ..        ...++..+.+|++++ +++.+.
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~--------~~--------~~~~~~~~~~D~~~~~~~~~~~   64 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK--------PD--------LSGNFHFLQLDLSDDLEPLFDW   64 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc--------cc--------cCCcEEEEECChHHHHHHHHHh
Confidence            5556789999999999999999999999999999998761        10        123578899999998 444444


Q ss_pred             HcCCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccccCC
Q 025660           80 IAGCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                      +..+|+|||+||....      ...+.++..+.+|+.++.++++.+.+    .+ .++||++||...+.+...       
T Consensus        65 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~-------  136 (235)
T PRK06550         65 VPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGGG-------  136 (235)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCC-------
Confidence            5578999999996421      11222347899999999999888764    33 468999999876433211       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                     ...|+.+|...+.+.+.++.+.   ++++++++||.+.++...
T Consensus       137 ---------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~  179 (235)
T PRK06550        137 ---------------GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTA  179 (235)
T ss_pred             ---------------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccc
Confidence                           3469999999888888777654   899999999999998643

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2e-21  Score=159.44  Aligned_cols=166  Identities=16%  Similarity=0.108  Sum_probs=129.1

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..+++++|||||+|+||++++++|+++|++|++++|+.        +.       ...+.++.++.+|+++++++.+++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~--------~~-------~~~~~~~~~~~~D~~~~~~~~~~~   66 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRA--------PE-------TVDGRPAEFHAADVRDPDQVAALV   66 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCh--------hh-------hhcCCceEEEEccCCCHHHHHHHH
Confidence            344568999999999999999999999999999999986        22       011235788999999999888877


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||....     ...+.++..+++|+.++..+++.+.+    .+..++||++||...+.+.+   
T Consensus        67 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---  143 (252)
T PRK07856         67 DAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP---  143 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC---
Confidence            5       36999999997543     11222347899999999999998764    22246899999976543221   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~  203 (249)
                                         ....|+.+|...+.+++.++.+.  .++++.++||.+.++..
T Consensus       144 -------------------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~  185 (252)
T PRK07856        144 -------------------GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQS  185 (252)
T ss_pred             -------------------CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHH
Confidence                               13569999999999999988764  38999999999988864

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.88  E-value=1.1e-21  Score=160.88  Aligned_cols=169  Identities=12%  Similarity=0.120  Sum_probs=127.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++++|+..      .+..+.++.   .+.++.++.+|+++++++.++++  
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~------~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA------PETQAQVEA---LGRKFHFITADLIQQKDIDSIVSQA   77 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH------HHHHHHHHH---cCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            4688999999999999999999999999999888641      111122222   23467889999999999888876  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++|||||.....     ..+.++..+++|+.++..+.+.+.+    .+..++||++||...+.+...     
T Consensus        78 ~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-----  152 (251)
T PRK12481         78 VEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR-----  152 (251)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC-----
Confidence                 479999999975431     1233347899999998888776653    221369999999876533211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       ...|+.||.+.+.+.+.++.+   +|++++.|+||.+-++..
T Consensus       153 -----------------~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~  194 (251)
T PRK12481        153 -----------------VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNT  194 (251)
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCch
Confidence                             236999999999888877664   589999999999988754

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6e-21  Score=157.12  Aligned_cols=172  Identities=16%  Similarity=0.127  Sum_probs=126.0

Q ss_pred             CCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +.++|++|||||+|+||++++++|+++|++|++++++..       +..+.+ ......+.++.++.+|++|.+++.+++
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   78 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSR-------DEAEALAAEIRALGRRAVALQADLADEAEVRALV   78 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            345679999999999999999999999999988877541       222222 111112346888999999999888876


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC---CcceEEEEcccceeeccCCCcc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                      +       .+|+||||||....     ...+..+.++++|+.++.++++.+.+..   ..+++|+++|...+.+.+    
T Consensus        79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p----  154 (258)
T PRK09134         79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP----  154 (258)
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC----
Confidence            5       37999999997543     1112334789999999999999876531   135888888754322111    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~  202 (249)
                                        ....|+.||.+.|.+.+.++.+.  ++++++++||.+.++.
T Consensus       155 ------------------~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~  195 (258)
T PRK09134        155 ------------------DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSG  195 (258)
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence                              12469999999999999987764  4999999999987754

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6.1e-21  Score=156.48  Aligned_cols=171  Identities=18%  Similarity=0.186  Sum_probs=128.5

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+....++.+|+++.+++.++++
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL--------DGCQAVADAIVAAGGKAEALACHIGEMEQIDALFA   77 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            3568899999999999999999999999999999976        333322 2222223357789999999998877765


Q ss_pred             -------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             .+|+|||+||....      ...+.++..+++|+.++..+++.+.    +.+ .++++++||...+.+.+   
T Consensus        78 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---  153 (252)
T PRK07035         78 HIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGD---  153 (252)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCCC---
Confidence                   47999999986421      1122234789999999888777663    334 57999999976533211   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                         +...|+.||.+.+.+++.++.+.   |++++.+.||.+.++...
T Consensus       154 -------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~  197 (252)
T PRK07035        154 -------------------FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFAS  197 (252)
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccc
Confidence                               23569999999999999887653   899999999999887643

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.3e-21  Score=159.06  Aligned_cols=168  Identities=16%  Similarity=0.106  Sum_probs=126.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      |+++||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|+++++++.++++   
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~   72 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNE--------EGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACE   72 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            4799999999999999999999999999999986        333322 2222234467889999999998888775   


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          ++|+|||+||.....     ..+.++.++++|+.++.++++.+    ++.+ .++||++||..++.+..       
T Consensus        73 ~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~-------  144 (270)
T PRK05650         73 EKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGP-------  144 (270)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCC-------
Confidence                589999999976431     11223467889988877766654    4555 67999999987543221       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                     ....|+.+|...+.+.+.++.+   .++++++++||.+.++...
T Consensus       145 ---------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  188 (270)
T PRK05650        145 ---------------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLD  188 (270)
T ss_pred             ---------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccc
Confidence                           1357999999888877777665   3899999999999988654

>PRK06398 aldose dehydrogenase; Validated

Probab=99.88  E-value=3.3e-21  Score=158.77  Aligned_cols=159  Identities=17%  Similarity=0.182  Sum_probs=126.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+..        .          ..++.++.+|++|++++.++++  
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~--------~----------~~~~~~~~~D~~~~~~i~~~~~~~   66 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP--------S----------YNDVDYFKVDVSNKEQVIKGIDYV   66 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc--------c----------cCceEEEEccCCCHHHHHHHHHHH
Confidence            4589999999999999999999999999999999861        1          1157889999999998888775  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||+||....     ...+.++..+++|+.++.++++.+.+    .+ .++||++||..++.+.+      
T Consensus        67 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  139 (258)
T PRK06398         67 ISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTR------  139 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCCC------
Confidence                 58999999997533     11223347789999999888877754    34 57999999987643221      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~  203 (249)
                                      +...|+.||.+.+.+.+.++.+.  ++++++|+||.+.++..
T Consensus       140 ----------------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~  181 (258)
T PRK06398        140 ----------------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLL  181 (258)
T ss_pred             ----------------CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHH
Confidence                            13579999999999999887764  49999999999988753

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=160.58  Aligned_cols=169  Identities=15%  Similarity=0.083  Sum_probs=129.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +..+.+ .++..  .+.++.++.+|+++++++.+++
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDA--------ALAERAAAAIARDVAGARVLAVPADVTDAASVAAAV   77 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHH
Confidence            357899999999999999999999999999999986        333322 12211  2346788999999999888887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       .+|++||+||....     ...+.++..+++|+.++..+++++.+    .+ .++||++||...+.+.+   
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---  153 (260)
T PRK07063         78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIP---  153 (260)
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCC---
Confidence            6       58999999997532     11233447899999999888887653    33 57999999976533221   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                         +...|+.||.+.+.+.+.++.+.   |++++.|+||.+-++..
T Consensus       154 -------------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~  196 (260)
T PRK07063        154 -------------------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLT  196 (260)
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhh
Confidence                               13469999999999998887664   79999999999988754

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.9e-21  Score=157.73  Aligned_cols=170  Identities=17%  Similarity=0.087  Sum_probs=128.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+.        +..+.+ ..+...+.++..+.+|+++.+++.++++ 
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   77 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDA--------AGGEETVALIREAGGEALFVACDVTRDAEVKALVEQ   77 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            458999999999999999999999999999999986        332222 2222223468899999999998888766 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|+|||+||....      ...+..+..+++|+.++..+++.+.    +.+ .+++|++||..++.+...   
T Consensus        78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~---  153 (253)
T PRK06172         78 TIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPK---  153 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCCC---
Confidence                  46999999997432      1112234778899999877766543    344 579999999876543211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                         ...|+.+|.+.+.+.+.++.+.   ++++++++||.+-++...
T Consensus       154 -------------------~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~  196 (253)
T PRK06172        154 -------------------MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFR  196 (253)
T ss_pred             -------------------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhh
Confidence                               3569999999999998887764   799999999999888644

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.7e-21  Score=159.71  Aligned_cols=168  Identities=15%  Similarity=0.137  Sum_probs=129.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||.+++++|+++|++|++++|+.        +..+.+ ..+...+.++.++.+|+++++++.++++ 
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTE--------SQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQ   80 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            457999999999999999999999999999999986        333322 1222223468889999999998887765 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh-----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK-----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~-----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|+|||+||....     ...+..+.++.+|+.++.++++.+.+     .+ .++||++||..+..+..    
T Consensus        81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~----  155 (263)
T PRK07814         81 AVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTMGRLAGR----  155 (263)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEccccccCCCC----
Confidence                  57999999986432     11122347899999999999999864     23 57899999976533221    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~  202 (249)
                                        +...|+.+|...+.+++.++.+.  +++++.++||.+.++.
T Consensus       156 ------------------~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~  196 (263)
T PRK07814        156 ------------------GFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSA  196 (263)
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCch
Confidence                              24579999999999999887764  5899999999998764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.5e-21  Score=158.44  Aligned_cols=211  Identities=14%  Similarity=0.129  Sum_probs=138.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|+++.++..    +..+..+.+ +.+...+.++.++++|+++++++.++++ 
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSA----ASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCc----cchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence            4579999999999999999999999999877776541    011111111 1111123367889999999999888765 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEE-cccceeeccCCCccccC
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYT-SSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~-SS~~~~~~~~~~~~~~~  148 (249)
                            ++|++||+||....     ...+.++.++++|+.++..+++.+.+.- ..++++++ ||.... ..+       
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-~~~-------  154 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-FTP-------  154 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-cCC-------
Confidence                  47999999997432     1122234789999999999999887541 13577776 443221 110       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccc
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK  225 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (249)
                                     ....|+.||.+.|.+.+.++.+.   ++++++++||.+.++...+....  ... ..   .....
T Consensus       155 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~-~~---~~~~~  213 (257)
T PRK12744        155 ---------------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA--EAV-AY---HKTAA  213 (257)
T ss_pred             ---------------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc--chh-hc---ccccc
Confidence                           12469999999999999998774   69999999999988764321110  000 00   00000


Q ss_pred             ccccccccccchhhHHHhhhhc
Q 025660          226 ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .........+.+.+|++.++.|
T Consensus       214 ~~~~~~~~~~~~~~dva~~~~~  235 (257)
T PRK12744        214 ALSPFSKTGLTDIEDIVPFIRF  235 (257)
T ss_pred             cccccccCCCCCHHHHHHHHHH
Confidence            0111112257788999998876

>PRK08017 oxidoreductase; Provisional

Probab=99.88  E-value=2.5e-21  Score=159.04  Aligned_cols=196  Identities=20%  Similarity=0.164  Sum_probs=135.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc----
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   81 (249)
                      ++++||||+|+||+++++.|+++|++|++++|+.        ++.+.+...     +++.+.+|+++.+++.++++    
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~i~~   69 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKP--------DDVARMNSL-----GFTGILLDLDDPESVERAADEVIA   69 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHhHHHHhC-----CCeEEEeecCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999987        444433322     36788999999988766553    


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHH----HHHHHhcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGI----LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l----~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          .+|.+||++|.....     ..+..+..++.|+.++.++    ++.+++.+ .+++|++||..++.+.+       
T Consensus        70 ~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~-------  141 (256)
T PRK08017         70 LTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTP-------  141 (256)
T ss_pred             hcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCCC-------
Confidence                368999999964321     1122347889999988775    55556666 67999999975432221       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHH---HcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccc
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE---EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK  225 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (249)
                                     ..+.|+.+|...|.+.+.++.   ..++++++++||.+.++.....        ... ..... .
T Consensus       142 ---------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--------~~~-~~~~~-~  196 (256)
T PRK08017        142 ---------------GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNV--------NQT-QSDKP-V  196 (256)
T ss_pred             ---------------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcc--------cch-hhccc-h
Confidence                           145799999999988775533   3589999999998766533211        000 00111 1


Q ss_pred             ccccccccccchhhHHHhhhhc
Q 025660          226 ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ...+...+.+++.+|+++++..
T Consensus       197 ~~~~~~~~~~~~~~d~a~~~~~  218 (256)
T PRK08017        197 ENPGIAARFTLGPEAVVPKLRH  218 (256)
T ss_pred             hhhHHHhhcCCCHHHHHHHHHH
Confidence            1122333567899999888754

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.5e-21  Score=163.31  Aligned_cols=182  Identities=16%  Similarity=0.043  Sum_probs=126.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhh----hhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      ++++|+||||+|+||++++++|+++|++|++++|+.        ++..    .+... ..+.++.++.+|++|.+++.++
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~--------~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~v~~~   85 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNL--------DKGKAAAARITAA-TPGADVTLQELDLTSLASVRAA   85 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHh-CCCCceEEEECCCCCHHHHHHH
Confidence            457899999999999999999999999999999986        2222    22211 1124678899999999988887


Q ss_pred             Hc-------CCCEEEEccccCCCC---CCChHHHhhhhHHhH----HHHHHHHHHhcCCcceEEEEcccceeeccCCCcc
Q 025660           80 IA-------GCTGVLHVATPVDFE---DKEPEEVITQRAING----TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~----t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                      ++       ++|+||||||.....   ..+..+..+.+|+.+    +..+++.+++.+ .++||++||...+........
T Consensus        86 ~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~  164 (306)
T PRK06197         86 ADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFD  164 (306)
T ss_pred             HHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCcc
Confidence            65       479999999975331   122234788999999    555666666655 579999999865332211111


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEE--eecCeEeCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVT--LIPSMVVGPFIC  204 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~--vrp~~v~g~~~~  204 (249)
                      ...++.+         ..+...|+.||.+.+.+.+.++.+.   ++++++  +.||.|.++...
T Consensus       165 ~~~~~~~---------~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~  219 (306)
T PRK06197        165 DLQWERR---------YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELAR  219 (306)
T ss_pred             ccCcccC---------CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccc
Confidence            1111111         1234679999999999988877653   555554  479999988654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.88  E-value=5.5e-21  Score=156.11  Aligned_cols=171  Identities=16%  Similarity=0.200  Sum_probs=124.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|+++||||+|+||++++++|+++|++|+++.++..      ....+.+.+....+.++..+.+|++|.+++.++++  
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   75 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS------PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKV   75 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3578999999999999999999999999988654320      02222233322233467788999999998887765  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++.++++|+.++..+.+.+.    +.+ .++||++||.....+..      
T Consensus        76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------  148 (246)
T PRK12938         76 KAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF------  148 (246)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCC------
Confidence                 57999999997542     1122234789999999777666554    444 57999999975432211      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                      ....|+.+|.+.+.+.+.++.+   .++++++++||.+.+|..
T Consensus       149 ----------------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~  191 (246)
T PRK12938        149 ----------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV  191 (246)
T ss_pred             ----------------CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchh
Confidence                            1356999999888888777654   489999999999998864

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.88  E-value=1e-20  Score=155.55  Aligned_cols=170  Identities=12%  Similarity=0.047  Sum_probs=128.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+. ++...+.++.++.+|+++.+++.++++ 
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   81 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA--------DAANHVVDEIQQLGGQAFACRCDITSEQELSALADF   81 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999876        3333221 111123467889999999998887765 


Q ss_pred             ------CCCEEEEccccCCCC----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 ------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                            ++|++||+||.....    ..+.++..+.+|+.++.++++++.+    .+ .++||++||.....+..      
T Consensus        82 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------  154 (255)
T PRK06113         82 ALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNI------  154 (255)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCC------
Confidence                  479999999975431    1122346689999999999998863    33 46999999976432111      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                      +...|+.+|.+.+.+++.++.+   .+++++++.||.+.++...
T Consensus       155 ----------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~  198 (255)
T PRK06113        155 ----------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK  198 (255)
T ss_pred             ----------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc
Confidence                            2346999999999999888765   4799999999999988643

>PRK09186 flagellin modification protein A; Provisional

Probab=99.88  E-value=5.7e-21  Score=156.90  Aligned_cols=207  Identities=17%  Similarity=0.120  Sum_probs=138.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|++|||||+|+||+++++.|+++|++|++++|+.        ++.+.+ .++..  ....+.++.+|++|++++.+++
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDK--------EALNELLESLGKEFKSKKLSLVELDITDQESLEEFL   74 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCh--------HHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHH
Confidence            467999999999999999999999999999999886        333222 11111  1234567799999999988887


Q ss_pred             cC-------CCEEEEccccCCC--------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccC
Q 025660           81 AG-------CTGVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        81 ~~-------~d~vih~a~~~~~--------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~  141 (249)
                      +.       +|+|||||+....        ...+..+..+.+|+.++..+++++    ++.+ .++||++||..++....
T Consensus        75 ~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~  153 (256)
T PRK09186         75 SKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPK  153 (256)
T ss_pred             HHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhcccc
Confidence            63       7999999975321        111223477888987776665554    4445 67999999976543221


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHH
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~  218 (249)
                      .   ...++.+.         .+...|+.||...+.+.+.++.+   .++++++++||.++++...        .+.+..
T Consensus       154 ~---~~~~~~~~---------~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~--------~~~~~~  213 (256)
T PRK09186        154 F---EIYEGTSM---------TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE--------AFLNAY  213 (256)
T ss_pred             c---hhcccccc---------CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH--------HHHHHH
Confidence            1   11122211         11236999999999998877775   4799999999988765311        111111


Q ss_pred             cCCCcccccccccccccchhhHHHhhhhc
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ...        .....+++.+|+|.++.|
T Consensus       214 ~~~--------~~~~~~~~~~dva~~~~~  234 (256)
T PRK09186        214 KKC--------CNGKGMLDPDDICGTLVF  234 (256)
T ss_pred             Hhc--------CCccCCCCHHHhhhhHhh
Confidence            111        112346788888888765

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.88  E-value=3.6e-21  Score=158.92  Aligned_cols=169  Identities=20%  Similarity=0.206  Sum_probs=128.9

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+++++|||||+|+||++++++|+++|++|++++|+.        +..+.+....  ..++.++.+|+++++++.++++ 
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   73 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSA--------EKLASLRQRF--GDHVLVVEGDVTSYADNQRAVDQ   73 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--CCcceEEEccCCCHHHHHHHHHH
Confidence            3568999999999999999999999999999999987        4444443221  2357889999999988887765 


Q ss_pred             ------CCCEEEEccccCCC-----C-CCC----hHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCC
Q 025660           82 ------GCTGVLHVATPVDF-----E-DKE----PEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~-~~~----~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~  143 (249)
                            .+|++||+||....     . ..+    .++..+++|+.++..+++++.+.  ...+++|++||...+.+... 
T Consensus        74 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-  152 (263)
T PRK06200         74 TVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG-  152 (263)
T ss_pred             HHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC-
Confidence                  47999999997432     1 111    13467889999988888877642  11368999999876543211 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~  203 (249)
                                           ...|+.||.+.+.+++.++.+.  +++++.|.||.+.++..
T Consensus       153 ---------------------~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~  193 (263)
T PRK06200        153 ---------------------GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLR  193 (263)
T ss_pred             ---------------------CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCc
Confidence                                 3469999999999998887764  59999999999988864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.88  E-value=5.1e-21  Score=156.04  Aligned_cols=167  Identities=20%  Similarity=0.191  Sum_probs=126.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|+.|++.+|+.        ++.+.+....  ..++.++.+|+++.+++.++++  
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   74 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV--------EKLEALAAEL--GERVKIFPANLSDRDEVKALGQKA   74 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHH
Confidence            457999999999999999999999999998888876        4444332211  2357889999999998888754  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||+||.....     ..+..+..+++|+.++.++++.+.+    .+ .++||++||..++++.+.     
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~-----  148 (245)
T PRK12936         75 EADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPG-----  148 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCCC-----
Confidence                 489999999975431     1122347889999999888887653    34 579999999765543321     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       ...|+.+|...+.+.+.++.+   .++++++++||.+.++..
T Consensus       149 -----------------~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~  190 (245)
T PRK12936        149 -----------------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMT  190 (245)
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchh
Confidence                             235999999888777766554   479999999998877654

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.2e-21  Score=155.75  Aligned_cols=166  Identities=18%  Similarity=0.143  Sum_probs=122.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++|+||||+|+||++++++|+++|++|++++|+.        ...+.+ +++     ...++.+|+++++++.++++ 
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~   72 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP--------EAGKAAADEV-----GGLFVPTDVTDEDAVNALFDT   72 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHc-----CCcEEEeeCCCHHHHHHHHHH
Confidence            457999999999999999999999999999999986        333322 222     12578999999998888876 


Q ss_pred             ------CCCEEEEccccCCCC-------CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                            ++|+|||+||.....       ..+.++..+++|+.++.++++.+.    +.+ .+++|++||.....+...  
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~--  149 (255)
T PRK06057         73 AAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSAT--  149 (255)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCC--
Confidence                  479999999875321       112234788999999887777654    344 578999999654332210  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         +...|+.+|++.+.+.+.++.+   .++++++++||.+.+|...
T Consensus       150 -------------------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~  193 (255)
T PRK06057        150 -------------------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQ  193 (255)
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhh
Confidence                               1245999998777666655443   3899999999999998654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.87  E-value=8.1e-21  Score=154.87  Aligned_cols=170  Identities=18%  Similarity=0.178  Sum_probs=126.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++|||||+|+||++++++|.++|++|++++|+..       +..+. .........++.++.+|+++.+++.++++  
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN-------DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEI   74 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH-------HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            358999999999999999999999999999999861       11121 12222223468899999999998888765  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||++|....     ...+..+..++.|+.++.++++.+    ++.+ .++||++||..++.+...     
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~-----  148 (245)
T PRK12824         75 EEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQFG-----  148 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCCC-----
Confidence                 47999999997532     112223478899999988875544    4445 679999999765432211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                       ...|+.+|.+.+.+++.++.+   .++++++++||.+.++...
T Consensus       149 -----------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  191 (245)
T PRK12824        149 -----------------QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVE  191 (245)
T ss_pred             -----------------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchh
Confidence                             346999999888888877653   4899999999999988643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.87  E-value=4.9e-21  Score=158.06  Aligned_cols=171  Identities=21%  Similarity=0.229  Sum_probs=131.5

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++++++||||+|+||++++++|+++|++|++++|+.        +..+.+.+.  .+.++..+.+|+++.+++.+++
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~   70 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA--------AGLQELEAA--HGDAVVGVEGDVRSLDDHKEAV   70 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHhh--cCCceEEEEeccCCHHHHHHHH
Confidence            665678999999999999999999999999999999987        444444322  1235788999999998877776


Q ss_pred             c-------CCCEEEEccccCCC-----C-CC----ChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccC
Q 025660           81 A-------GCTGVLHVATPVDF-----E-DK----EPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~-~~----~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~  141 (249)
                      +       ++|++|||||....     . ..    +.++..+++|+.++.++++++.+.  ...+++|++||...+.+..
T Consensus        71 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~  150 (262)
T TIGR03325        71 ARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG  150 (262)
T ss_pred             HHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC
Confidence            5       47999999996421     1 11    123478999999999999988653  1136899999876543321


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~  203 (249)
                      .                      ...|+.||.+.+.+.+.++.+.  .++++.|.||.+.++..
T Consensus       151 ~----------------------~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~  192 (262)
T TIGR03325       151 G----------------------GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLR  192 (262)
T ss_pred             C----------------------CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCc
Confidence            1                      2469999999999999888764  39999999999998864

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.1e-21  Score=157.64  Aligned_cols=162  Identities=22%  Similarity=0.231  Sum_probs=123.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|.++|++|++++|+.        +..        ...++.++.+|++|++++.++++  
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~--------~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~   71 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR--------PDD--------LPEGVEFVAADLTTAEGCAAVARAV   71 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCCh--------hhh--------cCCceeEEecCCCCHHHHHHHHHHH
Confidence            357999999999999999999999999999999986        110        12357789999999998776654  


Q ss_pred             -----CCCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -----GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                           ++|+|||+||....       ...+.++..+++|+.++.++.+.+    ++.+ .++||++||...+.+..    
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~----  146 (260)
T PRK06523         72 LERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLP----  146 (260)
T ss_pred             HHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCC----
Confidence                 47999999995421       112233478899999988776655    3444 57899999976532211    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       .+...|+.+|...+.+.+.++.+   .++++++++||.+.+|..
T Consensus       147 -----------------~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~  190 (260)
T PRK06523        147 -----------------ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAA  190 (260)
T ss_pred             -----------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccH
Confidence                             02457999999999888887765   379999999999999864

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.7e-21  Score=156.72  Aligned_cols=170  Identities=16%  Similarity=0.147  Sum_probs=128.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCC--CCCCCeEEEEcCCCChhhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLP--GASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~--~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++||||+|+||++++++|+++|++|++++|+.        ++.+.+. .+.  ..+.+++++.+|+++++++.++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRT--------DRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFA   73 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHH
Confidence            46899999999999999999999999999999987        3333221 111  113468899999999998877765


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|++||+||.....     ..+..+..+++|+.++.++++.+.    +.+ .++||++||..+..+.+.   
T Consensus        74 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~---  149 (248)
T PRK08251         74 EFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPG---  149 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCC---
Confidence                   589999999975441     112223678899999988888764    334 679999999765433211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                        +...|+.||.+.+.+.+.++.+   .++++++++||.+.++...
T Consensus       150 ------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~  193 (248)
T PRK08251        150 ------------------VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA  193 (248)
T ss_pred             ------------------CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh
Confidence                              1346999999999888887765   3799999999999887643

>PRK08324 short chain dehydrogenase; Validated

Probab=99.87  E-value=6.5e-21  Score=176.49  Aligned_cols=209  Identities=20%  Similarity=0.131  Sum_probs=148.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++|||||+|+||+++++.|.++|++|++++|+.        +....+. .+... .++.++.+|+++++++.++++  
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~--------~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~  492 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDE--------EAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEA  492 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCH--------HHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999987        4433322 12111 367899999999998888775  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+.+|+.++..+++.+.+    .+..++||++||..++.+.+.     
T Consensus       493 ~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~-----  567 (681)
T PRK08324        493 ALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN-----  567 (681)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC-----
Confidence                 58999999997543     11222347889999999999776653    331269999999876543211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEe-CCCCCCCCCccHHHHHHHHcCCCc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVV-GPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       ...|+.+|...+.+++.++.+.   ++++++++|+.|| ++.....  ... .......+...
T Consensus       568 -----------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~--~~~-~~~~~~~g~~~  627 (681)
T PRK08324        568 -----------------FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG--EWI-EARAAAYGLSE  627 (681)
T ss_pred             -----------------cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc--hhh-hhhhhhccCCh
Confidence                             3579999999999999887664   6999999999998 5542211  110 00111111111


Q ss_pred             c----cccccccccccchhhHHHhhhhc
Q 025660          224 L----KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~----~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .    .+..+...+.+++.+|+|.++.|
T Consensus       628 ~~~~~~~~~~~~l~~~v~~~DvA~a~~~  655 (681)
T PRK08324        628 EELEEFYRARNLLKREVTPEDVAEAVVF  655 (681)
T ss_pred             HHHHHHHHhcCCcCCccCHHHHHHHHHH
Confidence            1    23456667889999999999865

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.87  E-value=3.5e-21  Score=159.16  Aligned_cols=159  Identities=18%  Similarity=0.199  Sum_probs=123.4

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+++++|||||+|+||++++++|+++|++|++++|+.        ...        ...++..+.+|+++++++.++++ 
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~--------~~~--------~~~~~~~~~~D~~~~~~~~~~~~~   70 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHG--------GDG--------QHENYQFVPTDVSSAEEVNHTVAE   70 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc--------ccc--------ccCceEEEEccCCCHHHHHHHHHH
Confidence            3468999999999999999999999999999999886        111        11257789999999998888766 


Q ss_pred             ------CCCEEEEccccCCC--------------CCCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceee
Q 025660           82 ------GCTGVLHVATPVDF--------------EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVF  138 (249)
Q Consensus        82 ------~~d~vih~a~~~~~--------------~~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~  138 (249)
                            .+|+|||+||....              ...+.++..+++|+.++..+++++.+.   ...++||++||..++.
T Consensus        71 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  150 (266)
T PRK06171         71 IIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE  150 (266)
T ss_pred             HHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence                  47999999996432              011223478999999999998887643   1146899999987543


Q ss_pred             ccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEe
Q 025660          139 YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVV  199 (249)
Q Consensus       139 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~  199 (249)
                      +...                      ...|+.+|...+.+++.++.+   +++++++|+||.+.
T Consensus       151 ~~~~----------------------~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        151 GSEG----------------------QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             CCCC----------------------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence            3211                      356999999999988887765   48999999999985

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.3e-21  Score=160.40  Aligned_cols=171  Identities=19%  Similarity=0.177  Sum_probs=128.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+.        +..+.+. ++...+.++.++.+|++|++++.++++ 
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~--------~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~  110 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARRE--------DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD  110 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        4433332 221223457889999999999888877 


Q ss_pred             ------CCCEEEEccccCCCC---C--C--ChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDFE---D--K--EPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~---~--~--~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                            ++|+||||||.....   .  .  +..+..+++|+.++..+++.+.    +.+ .++||++||..++... .  
T Consensus       111 ~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-~--  186 (293)
T PRK05866        111 VEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEA-S--  186 (293)
T ss_pred             HHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCC-C--
Confidence                  689999999975431   0  1  1224678999999888777654    445 5799999996543211 0  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                             +           ....|+.||.+.+.+.+.++.+.   ++++++++||.+-++...
T Consensus       187 -------p-----------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~  231 (293)
T PRK05866        187 -------P-----------LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA  231 (293)
T ss_pred             -------C-----------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc
Confidence                   0           13469999999998888876653   899999999999887653

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.9e-21  Score=155.04  Aligned_cols=169  Identities=21%  Similarity=0.222  Sum_probs=127.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+|+||++++++|+++|++|++++|++        ++...+ ..+... .+++++.+|+++.+++.++++ 
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~   75 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQ--------KELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDA   75 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCH--------HHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        333322 222211 468889999999998887776 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccccC
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                            .+|+|||+++.....     ..+..+..+++|+.++.++++++.+.  ...+++|++||..++.+..       
T Consensus        76 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------  148 (237)
T PRK07326         76 IVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA-------  148 (237)
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC-------
Confidence                  589999999875431     11223477899999999988887643  1257899999976532211       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                     +...|+.+|+..+.+.+.+..+   .+++++++|||.+.++..
T Consensus       149 ---------------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~  191 (237)
T PRK07326        149 ---------------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFN  191 (237)
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccc
Confidence                           1346999999888888876543   489999999999988754

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.8e-21  Score=156.63  Aligned_cols=169  Identities=21%  Similarity=0.210  Sum_probs=127.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|++        +..+.+ ........++.++.+|+++++++..+++ 
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQ--------DALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAE   76 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        333222 1112223467889999999998877765 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+|||+||.....     ..+..+..+.+|+.++.++++.+.    +.+ .++||++||..++.+..     
T Consensus        77 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----  150 (241)
T PRK07454         77 LLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFP-----  150 (241)
T ss_pred             HHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCC-----
Confidence                  489999999975431     112334778899998888777653    344 57999999987643221     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       +...|+.+|...+.+.+.++.+   .+++++++|||.+.+|..
T Consensus       151 -----------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~  193 (241)
T PRK07454        151 -----------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLW  193 (241)
T ss_pred             -----------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcc
Confidence                             1356999999999888876543   489999999999988763

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.7e-21  Score=158.13  Aligned_cols=170  Identities=20%  Similarity=0.198  Sum_probs=127.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+.        ...+...++...+.++.++.+|+++++++.++++  
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   76 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISP--------EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRA   76 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH--------HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH
Confidence            458999999999999999999999999999999876        2222222222223467889999999998888766  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           .+|+|||+||....     ...+..+..+++|+.++..+++.+.+    .+ .++||++||....... .     
T Consensus        77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-~-----  149 (263)
T PRK08226         77 KEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVA-D-----  149 (263)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccC-C-----
Confidence                 47999999997543     11222346789999999998888754    23 5689999996542111 0     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                     .....|+.+|...+.+.+.++.+.   +++++.++||.+.++..
T Consensus       150 ---------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~  193 (263)
T PRK08226        150 ---------------PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMA  193 (263)
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHH
Confidence                           013469999999999998887654   79999999999999854

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=5e-21  Score=158.22  Aligned_cols=169  Identities=12%  Similarity=0.077  Sum_probs=129.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+++++||||+|+||++++++|+++|++|++++|+.        ++.+.+ ......+.++.++.+|+++++++.++++ 
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ--------ELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQ   80 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999998876        333322 2222223468899999999999888875 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+|||+||....     ...+..+..+.+|+.++..+++.+.+    .+ .++||++||.....+..     
T Consensus        81 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  154 (265)
T PRK07097         81 IEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRE-----  154 (265)
T ss_pred             HHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCC-----
Confidence                  37999999998643     12233347888999998877776653    34 57999999976433221     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                       +...|+.+|...+.+.+.++.+.   |++++.|+||.+.++..
T Consensus       155 -----------------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  197 (265)
T PRK07097        155 -----------------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQT  197 (265)
T ss_pred             -----------------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccch
Confidence                             13569999999999998887764   89999999999999864

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.87  E-value=5.6e-21  Score=156.94  Aligned_cols=170  Identities=16%  Similarity=0.163  Sum_probs=129.0

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+++++|||||+|+||++++++|+++|++|++++++.      ..+..+.+...   +.++..+.+|++|.+++.++++ 
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~------~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~   78 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE------PTETIEQVTAL---GRRFLSLTADLRKIDGIPALLER   78 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc------hHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHH
Confidence            3468999999999999999999999999999887754      11222333322   3357889999999998888876 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|++|||||.....     ..+.++..+++|+.++.++++.+.+.    +..+++|++||..++.+...    
T Consensus        79 ~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  154 (253)
T PRK08993         79 AVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR----  154 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC----
Confidence                  479999999975431     12234588999999999888877542    21368999999876533211    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                        ...|+.+|.+.+.+.+.++.+   +|++++.++||.+.++..
T Consensus       155 ------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~  196 (253)
T PRK08993        155 ------------------VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNT  196 (253)
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcch
Confidence                              236999999999888887766   489999999999998864

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.6e-21  Score=158.37  Aligned_cols=168  Identities=13%  Similarity=0.104  Sum_probs=125.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+. ++.. .+.++..+.+|++|++++.++++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNE--------ENLKKAREKIKSESNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            467899999999999999999999999999999986        3333221 1111 13468899999999998888876


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|++||+||....     ...+.++..+++|+.+...+.+    .+++.+ .++||++||..+..+.+.    
T Consensus        79 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~~----  153 (263)
T PRK08339         79 ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIPN----  153 (263)
T ss_pred             HHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCCc----
Confidence                  48999999996432     1122334788999877666555    444444 579999999875322111    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                        ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+.++.
T Consensus       154 ------------------~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (263)
T PRK08339        154 ------------------IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDR  194 (263)
T ss_pred             ------------------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHH
Confidence                              246999999988888887766   37999999999998874

>PRK07069 short chain dehydrogenase; Validated

Probab=99.87  E-value=4.8e-21  Score=156.83  Aligned_cols=168  Identities=17%  Similarity=0.159  Sum_probs=124.7

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCC--CCCeEEEEcCCCChhhHHHHHc--
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGA--SERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~--~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++||||+|+||+++++.|+++|++|++++|+..       +..+.+. .+...  ......+.+|+++++++.++++  
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDA-------AGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQA   73 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcc-------hHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHH
Confidence            4899999999999999999999999999999731       3333222 11111  1234568899999998887765  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHh----HHHHHHHHHHhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAIN----GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~----~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           .+|+|||+||.....     ..+..+..+++|+.    +++.+++.+++.+ .++||++||..++.+...     
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~-----  147 (251)
T PRK07069         74 ADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPD-----  147 (251)
T ss_pred             HHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCC-----
Confidence                 479999999975431     11122467888887    6777888887766 689999999876543321     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-----CCcEEEeecCeEeCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~vrp~~v~g~~~~  204 (249)
                                       ...|+.+|...+.+.+.++.+.     +++++.++||.+.+|...
T Consensus       148 -----------------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~  192 (251)
T PRK07069        148 -----------------YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVD  192 (251)
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchh
Confidence                             3469999999999988876652     489999999999998753

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8.1e-21  Score=156.79  Aligned_cols=170  Identities=24%  Similarity=0.234  Sum_probs=129.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..+++++|||||+|+||++++++|+++|++|++++|+.        +..+.+. ++ ....++.++.+|++|++++.++
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~   71 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA--------EKLEALAARL-PYPGRHRWVVADLTSEAGREAV   71 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHH-hcCCceEEEEccCCCHHHHHHH
Confidence            666778999999999999999999999999999999987        4433332 22 2234788999999999988777


Q ss_pred             Hc------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCc
Q 025660           80 IA------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        80 ~~------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      ++      .+|+|||+||.....     ..+..+..+++|+.++.++++.+.+    .+ .+++|++||..+..+...  
T Consensus        72 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~--  148 (263)
T PRK09072         72 LARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGYPG--  148 (263)
T ss_pred             HHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCCCC--
Confidence            65      479999999975431     1122347788999999998888764    23 468999999765433211  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                          ...|+.+|...+.+++.++.+   .+++++++.||.+.++.
T Consensus       149 --------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~  189 (263)
T PRK09072        149 --------------------YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAM  189 (263)
T ss_pred             --------------------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccc
Confidence                                346999999988888777765   37999999999998765

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.87  E-value=3.1e-21  Score=166.47  Aligned_cols=232  Identities=23%  Similarity=0.293  Sum_probs=166.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC---CeEEEEEcCCCCcccCCchhhhhhc-------------cCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG---YSVTTTVRSELDPEHRNSKDLSFLK-------------NLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~-------------~~~~~~~~~~~~~   67 (249)
                      +.|+|+|||||||+|+-++++|+...   .++.++.|..     +..+..+.+.             ..+...+++..+.
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k-----~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~   85 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAK-----KGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA   85 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecC-----CCCCHHHHHHHHHhhhHHHHHHhhCccceecceecc
Confidence            46899999999999999999999875   3678888865     2222222222             2233446888999


Q ss_pred             cCCCCh------hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccC
Q 025660           68 ADLSHP------DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        68 ~Dl~~~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~  141 (249)
                      ||+.++      .++..+.+++|+|||+||...+  +++++.....|..||+++++.|++....+.++++||+.+. -..
T Consensus        86 GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrF--de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~  162 (467)
T KOG1221|consen   86 GDISEPDLGISESDLRTLADEVNIVIHSAATVRF--DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNV  162 (467)
T ss_pred             ccccCcccCCChHHHHHHHhcCCEEEEeeeeecc--chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-ccc
Confidence            999886      3566677899999999999877  6777789999999999999999998768999999998764 111


Q ss_pred             C--Ccc--ccCC----------CCCCchhHh-----hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          142 K--DVD--MMDE----------TFWSDVDYI-----RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       142 ~--~~~--~~~e----------~~~~~~~~~-----~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                      +  ...  +..|          +...+.+..     .-...+.|.|.-+|+.+|.++...+.  +++++|+||+.|....
T Consensus       163 ~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~--~lPivIiRPsiI~st~  240 (467)
T KOG1221|consen  163 GHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE--NLPLVIIRPSIITSTY  240 (467)
T ss_pred             ccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc--CCCeEEEcCCceeccc
Confidence            1  111  1111          111111111     11224678899999999999999765  8999999999999987


Q ss_pred             CCCC------CCccHHHHHHHHcCCCcccccccccccccchhhHHHhhh
Q 025660          203 ICPK------FAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAF  245 (249)
Q Consensus       203 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~  245 (249)
                      ..+.      ..+....+....+|.....+.+.+...|+|.+|.++-++
T Consensus       241 ~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~  289 (467)
T KOG1221|consen  241 KEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAM  289 (467)
T ss_pred             cCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHH
Confidence            7653      222333444444444445567888889999999988765

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=5.4e-21  Score=155.98  Aligned_cols=167  Identities=18%  Similarity=0.159  Sum_probs=126.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh----ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL----KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      .+|+|+||||+++||.+++.+|.++|..++.+.|..        ++++.+    ....... ++..+++|++|.++..+.
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~--------rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~   81 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRA--------RRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKF   81 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhh--------hhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHH
Confidence            568999999999999999999999999988888876        344333    3222222 689999999999998877


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|++|||||....     ...+.....+++|+.|+-.+.+++    ++.+ .+|||.+||..++.+.+. 
T Consensus        82 ~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~-  159 (282)
T KOG1205|consen   82 VEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPF-  159 (282)
T ss_pred             HHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCc-
Confidence            64       58999999998654     122333468999998866655555    5555 689999999887554422 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcC-----CcEEEeecCeEeCCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG-----LDLVTLIPSMVVGPFI  203 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~~vrp~~v~g~~~  203 (249)
                                           ...|++||.+.+.+...++.+..     +.+ +|-||.|-+...
T Consensus       160 ---------------------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~  202 (282)
T KOG1205|consen  160 ---------------------RSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFT  202 (282)
T ss_pred             ---------------------ccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeeccc
Confidence                                 34799999999988888888752     233 589999987744

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.4e-21  Score=157.18  Aligned_cols=168  Identities=17%  Similarity=0.132  Sum_probs=126.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCC-CCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ||+++||||+|+||++++++|+++|++|++++|+.        +..+.+ +++. ....+++++.+|+++++++.++++ 
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDV--------ERLERLADDLRARGAVAVSTHELDILDTASHAAFLDS   72 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCH--------HHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence            35899999999999999999999999999999987        333222 1111 123468899999999999888776 


Q ss_pred             ---CCCEEEEccccCCCC---CC--ChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ---GCTGVLHVATPVDFE---DK--EPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ---~~d~vih~a~~~~~~---~~--~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                         .+|+|||++|.....   ..  +.....+++|+.++.++++.+.+    .+ .++||++||.....+.+        
T Consensus        73 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--------  143 (243)
T PRK07102         73 LPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGRA--------  143 (243)
T ss_pred             HhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCCC--------
Confidence               369999999865431   11  11236788999999999888764    34 67999999975432211        


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                    ....|+.+|...+.+.+.++.+   .++++++++||.++++..
T Consensus       144 --------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~  186 (243)
T PRK07102        144 --------------SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMT  186 (243)
T ss_pred             --------------CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhh
Confidence                          1246999999999988887654   489999999999999853

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.87  E-value=5e-21  Score=156.56  Aligned_cols=171  Identities=16%  Similarity=0.124  Sum_probs=123.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++|||||+|+||+++++.|+++|++|+++.++..       +..+.+ ..+.....++.++.+|+++++++.++++  
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDA-------AAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAV   74 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHH
Confidence            468999999999999999999999999987754431       222222 1222223468899999999988877664  


Q ss_pred             -----CCCEEEEccccCCC----C--CCChHHHhhhhHHhHHHHHHHHHHhc-C-----CcceEEEEcccceeeccCCCc
Q 025660           82 -----GCTGVLHVATPVDF----E--DKEPEEVITQRAINGTLGILKSCLKS-G-----TVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -----~~d~vih~a~~~~~----~--~~~~~~~~~~~n~~~t~~l~~~~~~~-~-----~~~~~v~~SS~~~~~~~~~~~  144 (249)
                           .+|+|||+||....    .  ..+..+..+.+|+.++..+++.+.+. .     ..++||++||..++.+...  
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--  152 (248)
T PRK06947         75 QSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN--  152 (248)
T ss_pred             HHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC--
Confidence                 58999999997532    1  11222467899999998887654432 1     1246999999765433211  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                         ....|+.||...+.+++.++.+.   +++++++|||.+.+|..
T Consensus       153 -------------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~  195 (248)
T PRK06947        153 -------------------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIH  195 (248)
T ss_pred             -------------------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccc
Confidence                               02359999999998888877654   79999999999999864

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.3e-21  Score=161.17  Aligned_cols=169  Identities=15%  Similarity=0.128  Sum_probs=127.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .+....+.++.++.+|++|++++.++++ 
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~--------~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~   77 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDE--------EALQAVAEECRALGAEVLVVPTDVTDADQVKALATQ   77 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            457999999999999999999999999999999987        444433 2222234467889999999999888874 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|++|||||....     ...+..+..+++|+.++.++.+.+.    +.+ .++||++||..++.+.+.    
T Consensus        78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p~----  152 (330)
T PRK06139         78 AASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQPY----  152 (330)
T ss_pred             HHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCCC----
Confidence                  57999999997543     1112234789999999888776654    444 579999999775433211    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~v~g~~~  203 (249)
                                        ...|+.||...+.+.+.++.+    .+++++.|.||.+.+|..
T Consensus       153 ------------------~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~  195 (330)
T PRK06139        153 ------------------AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGF  195 (330)
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccc
Confidence                              356999999877776666554    379999999999999864

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.2e-20  Score=155.07  Aligned_cols=181  Identities=17%  Similarity=0.123  Sum_probs=128.9

Q ss_pred             CCCCCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccC----CchhhhhhccCCCCCCCeEEEEcCCCChh
Q 025660            1 MEEGKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHR----NSKDLSFLKNLPGASERLRIFHADLSHPD   74 (249)
Q Consensus         1 m~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~   74 (249)
                      |..+++++|||||+|  +||++++++|+++|++|++++|++.+....    ..........+...+.+++++.+|+++.+
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            556678999999995  799999999999999999999873111000    00111111112222346889999999998


Q ss_pred             hHHHHHc-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeec
Q 025660           75 GFDAAIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFY  139 (249)
Q Consensus        75 ~~~~~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~  139 (249)
                      ++..+++       .+|+|||+||.....     ..+..+..+.+|+.++..+++.+.+.   ...++||++||...+.+
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~  160 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP  160 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence            8777665       479999999975331     11222477899999999999988643   11469999999765432


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                      ..                      ....|+.+|.+.+.+++.++.+   .+++++.++||.+.++..
T Consensus       161 ~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~  205 (256)
T PRK12748        161 MP----------------------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWI  205 (256)
T ss_pred             CC----------------------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCC
Confidence            21                      1346999999999998887665   489999999999887753

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1e-20  Score=153.01  Aligned_cols=163  Identities=20%  Similarity=0.152  Sum_probs=127.4

Q ss_pred             EEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHcC---CC
Q 025660            9 CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG---CT   84 (249)
Q Consensus         9 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d   84 (249)
                      |||||+|+||++++++|+++|++|++++|+.        +....+. ++. ...+++++.+|+++++++.++++.   +|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id   71 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSR--------DRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEAGPFD   71 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999986        3333221 111 134678999999999999999874   79


Q ss_pred             EEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           85 GVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        85 ~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++||++|.....     ..+..+..+++|+.++.++.++....+ .++||++||..++.+.+                  
T Consensus        72 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~~~------------------  132 (230)
T PRK07041         72 HVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRPSA------------------  132 (230)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCCCC------------------
Confidence            999999975431     122334889999999999999665544 68999999987653321                  


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHc-CCcEEEeecCeEeCCCC
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~vrp~~v~g~~~  203 (249)
                          +.+.|+.+|.+.+.+.+.++.+. +++++.++||.+.++..
T Consensus       133 ----~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~  173 (230)
T PRK07041        133 ----SGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLW  173 (230)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHH
Confidence                24579999999999999987764 68999999999987753

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8.3e-21  Score=156.11  Aligned_cols=171  Identities=15%  Similarity=0.153  Sum_probs=129.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+.        ++.+.+.. +.....+++++.+|+++++++.++++ 
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV--------ERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAH   79 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            458999999999999999999999999999999987        44433321 11223467899999999998888876 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----C-------CcceEEEEcccceeec
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----G-------TVKRVVYTSSNAAVFY  139 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~-------~~~~~v~~SS~~~~~~  139 (249)
                            .+|++||+||.....     ..+.++.++.+|+.++..+++.+.+.    .       ..+++|++||..++.+
T Consensus        80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  159 (258)
T PRK06949         80 AETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV  159 (258)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence                  489999999964331     11223478899999999888876531    1       0258999999765322


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      ..                      +...|+.+|.+.+.+++.++.+   +++++++++||.+++|...
T Consensus       160 ~~----------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~  205 (258)
T PRK06949        160 LP----------------------QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINH  205 (258)
T ss_pred             CC----------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcch
Confidence            11                      1356999999999988887665   4899999999999998754

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.1e-20  Score=158.80  Aligned_cols=171  Identities=22%  Similarity=0.169  Sum_probs=130.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      .++++|||||+|+||+++++.|.++|++|++++|+.        ++.+.+.........+..+.+|++|.+++.++++  
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE--------AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999987        4444432221223356677899999998887765  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                           .+|+||||||....     ...+.++..+++|+.++.++++.+.+.  ...++||++||..++.+.+.       
T Consensus        80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  152 (296)
T PRK05872         80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG-------  152 (296)
T ss_pred             HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC-------
Confidence                 47999999997543     112223478999999999998887642  11469999999876433211       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                     ...|+.||...+.+.+.++.+   .|++++++.||.+.++...
T Consensus       153 ---------------~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  195 (296)
T PRK05872        153 ---------------MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVR  195 (296)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhh
Confidence                           346999999999988877654   4899999999999888643

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.4e-20  Score=154.12  Aligned_cols=173  Identities=16%  Similarity=0.201  Sum_probs=126.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..+++++|||||+|+||+++++.|+++|++|++++|+.        ++.+.+ .+....+.++.++.+|+++++++.++
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQ--------EKLEEAVAECGALGTEVRGYAANVTDEEDVEAT   72 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            555678999999999999999999999999999999986        333322 22222234678899999999888776


Q ss_pred             Hc-------CCCEEEEccccCCCC--------------CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEccc
Q 025660           80 IA-------GCTGVLHVATPVDFE--------------DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSN  134 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~--------------~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~  134 (249)
                      ++       .+|.|||+||.....              ..+.....+.+|+.++..+.+.+.    +.....+|+++||.
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~  152 (253)
T PRK08217         73 FAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI  152 (253)
T ss_pred             HHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc
Confidence            65       379999999964310              112233677899999887766443    33223579999987


Q ss_pred             ceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          135 AAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      ..+ +..                      +...|+.+|.+.+.+++.++.+   ++++++.++||.+.++...
T Consensus       153 ~~~-~~~----------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~  202 (253)
T PRK08217        153 ARA-GNM----------------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA  202 (253)
T ss_pred             ccc-CCC----------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc
Confidence            532 211                      1356999999999998887754   5899999999999988653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.2e-20  Score=160.92  Aligned_cols=167  Identities=17%  Similarity=0.135  Sum_probs=125.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|+++++++++  
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~--------~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~   79 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGE--------EGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRA   79 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999986        443332 2222234568889999999999888765  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHH----HHHHHHhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLG----ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~----l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           .+|++||+||....     ...+..+..+++|+.++.+    +++.+++.+ .++||++||..++.+.+      
T Consensus        80 ~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~------  152 (334)
T PRK07109         80 EEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIP------  152 (334)
T ss_pred             HHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCC------
Confidence                 58999999997433     1122334778888776655    445555555 57999999987653321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~  202 (249)
                                      ....|+.||...+.+.+.++.+     .++++++|+||.+.+|.
T Consensus       153 ----------------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~  196 (334)
T PRK07109        153 ----------------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ  196 (334)
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch
Confidence                            1356999999888887776554     26999999999998874

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.5e-20  Score=152.05  Aligned_cols=168  Identities=15%  Similarity=0.135  Sum_probs=125.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +|+++||||+|+||++++++|+++|++|++++|+.        +..+.+. .+.....++.++.+|+++++++.++++  
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTK--------EKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQI   72 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            36899999999999999999999999999999986        3333222 111122468899999999998888765  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           .+|+|||+||....     ...+.++..+++|+.++.++++++.+.    +..++||++||...+.+...     
T Consensus        73 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-----  147 (252)
T PRK07677         73 DEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG-----  147 (252)
T ss_pred             HHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC-----
Confidence                 47999999985322     111223478999999999999988542    21368999999754321111     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~v~g~~  202 (249)
                                       ...|+.||.+.+.+.+.++.+    +|++++.|+||.+.++.
T Consensus       148 -----------------~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~  189 (252)
T PRK07677        148 -----------------VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTG  189 (252)
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccccc
Confidence                             246999999999888877665    37999999999998643

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.7e-20  Score=154.10  Aligned_cols=170  Identities=14%  Similarity=0.125  Sum_probs=122.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchh-hhhh-ccCCCC-CCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKD-LSFL-KNLPGA-SERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~l-~~~~~~-~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      +.++||||||+|+||++++++|+++| ++|++++|++        ++ .+.+ +++... ..+++++.+|++|++++.++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~--------~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~   78 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPD--------DPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKV   78 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCc--------chhHHHHHHHHHhcCCCceEEEEecCCChHHHHHH
Confidence            45789999999999999999999995 8999999987        22 2221 122111 23688999999999886666


Q ss_pred             Hc------CCCEEEEccccCCCCCC---Ch--HHHhhhhHHhHHHH----HHHHHHhcCCcceEEEEcccceeeccCCCc
Q 025660           80 IA------GCTGVLHVATPVDFEDK---EP--EEVITQRAINGTLG----ILKSCLKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        80 ~~------~~d~vih~a~~~~~~~~---~~--~~~~~~~n~~~t~~----l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      ++      ++|++||++|.......   ++  ....+++|+.++.+    +++.+.+.+ .++||++||..++.+..   
T Consensus        79 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~~---  154 (253)
T PRK07904         79 IDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVRR---  154 (253)
T ss_pred             HHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCC---
Confidence            54      58999999987543111   11  12468999988776    556666666 68999999976432110   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         +...|+.||++...+.+.++.+   +++++++++||.+.++...
T Consensus       155 -------------------~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~  198 (253)
T PRK07904        155 -------------------SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA  198 (253)
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc
Confidence                               1346999999888766655433   5899999999999987543

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.6e-20  Score=155.90  Aligned_cols=178  Identities=16%  Similarity=0.232  Sum_probs=125.6

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++++++||||+|+||++++++|+++|++|++++|+...... ....+..+ +++...+.++.++.+|+++++++.++++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPK-LPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccc-hhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            456899999999999999999999999999999997621000 00011111 1111223467889999999998888776


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCccc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                             ++|+|||+||.....     ..+..+..+++|+.++.++++.+.+.   ...++++++||.......      
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------  156 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK------  156 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc------
Confidence                   589999999975431     11223478899999999999988642   114689999985421110      


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecC-eEeCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPS-MVVGP  201 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~-~v~g~  201 (249)
                           +         ..+...|+.||.+.|.+++.++.+.   +++++.|.|| .+.++
T Consensus       157 -----~---------~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~  201 (273)
T PRK08278        157 -----W---------FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA  201 (273)
T ss_pred             -----c---------cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH
Confidence                 0         0124579999999999999887764   7999999998 45443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.86  E-value=1.6e-20  Score=152.42  Aligned_cols=167  Identities=17%  Similarity=0.202  Sum_probs=125.2

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHHHc-----
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-----   81 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   81 (249)
                      +||||++|+||++++++|+++|++|++++|+..       +... ....+...+.++.++.+|++|++++.++++     
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE-------EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEE   73 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCch-------hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999998751       1111 112222233467899999999998888775     


Q ss_pred             --CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 --GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 --~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                        .+|.|||++|.....     ..+..+..+++|+.++.++++.+.+.   ...++|+++||...+++.+.         
T Consensus        74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~---------  144 (239)
T TIGR01830        74 LGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG---------  144 (239)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC---------
Confidence              369999999975421     11223478899999999999988753   11579999999765543211         


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                   ...|+.+|...+.+.+.+..+   .+++++++|||.+.++..
T Consensus       145 -------------~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~  186 (239)
T TIGR01830       145 -------------QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMT  186 (239)
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhh
Confidence                         346999999888888877664   489999999998877654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.4e-20  Score=148.31  Aligned_cols=157  Identities=20%  Similarity=0.207  Sum_probs=121.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      .+++|||||+|+||++++++|+++|++|++++|+..        .     ..     ...++.+|+++.+++.++++   
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~--------~-----~~-----~~~~~~~D~~~~~~~~~~~~~~~   64 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI--------D-----DF-----PGELFACDLADIEQTAATLAQIN   64 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcc--------c-----cc-----CceEEEeeCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999872        1     01     12578999999998888776   


Q ss_pred             ---CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ---GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ---~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                         ++|+|||+||.....     ..+..+..++.|+.++.++.+.+.    +.+ .++||++||...+ +.+        
T Consensus        65 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-~~~--------  134 (234)
T PRK07577         65 EIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIF-GAL--------  134 (234)
T ss_pred             HhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccccc-CCC--------
Confidence               579999999975431     112223678899999877766654    445 6799999997642 211        


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                    ....|+.+|...+.+++.++.+   ++++++++|||.+.++..
T Consensus       135 --------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~  177 (234)
T PRK07577        135 --------------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELF  177 (234)
T ss_pred             --------------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccc
Confidence                          1356999999999888876654   489999999999998864

>PRK09242 tropinone reductase; Provisional

Probab=99.86  E-value=1.8e-20  Score=154.09  Aligned_cols=170  Identities=15%  Similarity=0.156  Sum_probs=129.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .+|+++||||+|+||++++++|.++|++|++++|+.        +..+.+. ++..  .+.++.++.+|+++++++.+++
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDA--------DALAQARDELAEEFPEREVHGLAADVSDDEDRRAIL   79 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            467999999999999999999999999999999986        3333221 1111  1346888999999998877776


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+|||+||....     ...+.++..+.+|+.++..+++++.+    .+ .++||++||..++.+..   
T Consensus        80 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~---  155 (257)
T PRK09242         80 DWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVR---  155 (257)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCC---
Confidence            5       47999999997432     11223347899999999998887753    34 57999999976543221   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         +...|+.+|...+.+++.++.+   .+++++.++||.+.+|...
T Consensus       156 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~  199 (257)
T PRK09242        156 -------------------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTS  199 (257)
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccc
Confidence                               1346999999999988887655   4899999999999998754

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.3e-20  Score=151.55  Aligned_cols=170  Identities=15%  Similarity=0.059  Sum_probs=128.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCe-EEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +.++++||||+|+||++++++|+++|++ |++++|+.        +....+ ..+...+.++.++.+|+++++++.++++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNA--------EKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVA   76 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCH--------HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            3478999999999999999999999998 99999876        222211 1112223467789999999998888775


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|+|||+||....     ...+.++..+++|+.++.++++.+.+    .+..+++|++||..++.+.+.   
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~---  153 (260)
T PRK06198         77 AADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF---  153 (260)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC---
Confidence                   47999999997542     11222346789999999998887754    221368999999876543211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                         ...|+.+|...|.+.+.++.+.   +++++.++||.++++..
T Consensus       154 -------------------~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        154 -------------------LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             -------------------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence                               3469999999999999877654   69999999999999864

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.6e-20  Score=155.29  Aligned_cols=167  Identities=18%  Similarity=0.152  Sum_probs=125.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +....+ .++.....++.++.+|+++++++.++++ 
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~   79 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQ--------EKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQ   79 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH
Confidence            347999999999999999999999999999999986        333222 1222222356789999999998888765 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccccC
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                            .+|+|||+||....     ...+.++..+++|+.++.++++++.+.  +..++||++||..++.+.+       
T Consensus        80 ~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~-------  152 (264)
T PRK07576         80 IADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP-------  152 (264)
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCC-------
Confidence                  36999999985322     112223477889999999999887653  1136999999976532211       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVG  200 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g  200 (249)
                                     ....|+.+|...+.+++.++.+   .+++++.++||.+.+
T Consensus       153 ---------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~  192 (264)
T PRK07576        153 ---------------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG  192 (264)
T ss_pred             ---------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence                           1356999999999999987665   479999999999875

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.86  E-value=7.6e-21  Score=156.64  Aligned_cols=167  Identities=18%  Similarity=0.078  Sum_probs=121.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      |++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++... .++.++.+|++|++++.++++   
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~-~~~~~~~~Dv~d~~~~~~~~~~~~   71 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNE--------ENLEKALKELKEY-GEVYAVKADLSDKDDLKNLVKEAW   71 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhc-CCceEEEcCCCCHHHHHHHHHHHH
Confidence            3799999999999999999999999999999986        433322 222211 257889999999998888775   


Q ss_pred             ----CCCEEEEccccCCC-----CC--CChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ----GCTGVLHVATPVDF-----ED--KEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~--~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                          ++|+|||+||....     .+  .+.+...+.+|+.++..+..    .+.+.+..++||++||..+..+.+     
T Consensus        72 ~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~-----  146 (259)
T PRK08340         72 ELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMP-----  146 (259)
T ss_pred             HhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCC-----
Confidence                58999999996431     11  11122556778776555443    333222257999999986532211     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                       +...|+.+|...+.+.+.++.++   |++++.|.||.+-+|+.
T Consensus       147 -----------------~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~  189 (259)
T PRK08340        147 -----------------PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGA  189 (259)
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccH
Confidence                             13469999999999999888764   79999999999988764

>TIGR02415 23BDH acetoin reductases

Probab=99.86  E-value=7.4e-21  Score=156.03  Aligned_cols=168  Identities=20%  Similarity=0.220  Sum_probs=126.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      |+++||||+|+||++++++|+++|++|+++.|+.        +....+ .++...+.++.++.+|++|++++.++++   
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~   72 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNE--------ETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAA   72 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999999999876        332222 2222223467889999999999888765   


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          .+|+|||+||.....     ..+.++..+++|+.++..+++.+.+    .+..+++|++||..+..+.+.      
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------  146 (254)
T TIGR02415        73 EKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI------  146 (254)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC------
Confidence                479999999975431     1122347799999998877766543    332369999999765443221      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                      ...|+.+|...+.+++.++.+.   ++++++++||.+.++..
T Consensus       147 ----------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~  188 (254)
T TIGR02415       147 ----------------LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMW  188 (254)
T ss_pred             ----------------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhh
Confidence                            3469999999999998877664   79999999999977753

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.3e-20  Score=153.72  Aligned_cols=162  Identities=23%  Similarity=0.190  Sum_probs=121.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc----
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   81 (249)
                      +++|||||+|+||++++++|+++|++|++++|+.        .... ..   ..+.++..+++|+++.+++.++++    
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~--------~~~~-~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   69 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSR--------HPSL-AA---AAGERLAEVELDLSDAAAAAAWLAGDLL   69 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCc--------chhh-hh---ccCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999986        2111 11   122367889999999998887432    


Q ss_pred             -------CCCEEEEccccCCCC------CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             .+|++|||||.....      ..+.++..+++|+.++..+.+.+.    +.+ .++||++||..++.+..   
T Consensus        70 ~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---  145 (243)
T PRK07023         70 AAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYA---  145 (243)
T ss_pred             HHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCC---
Confidence                   368999999975431      112234788999999776666554    333 57999999976543221   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH--cCCcEEEeecCeEeCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~vrp~~v~g~~  202 (249)
                                         +...|+.+|...|.+++.++.+  .++++++|+||.+-++.
T Consensus       146 -------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  186 (243)
T PRK07023        146 -------------------GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGM  186 (243)
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence                               2357999999999999988764  48999999999987764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.7e-20  Score=152.37  Aligned_cols=173  Identities=19%  Similarity=0.208  Sum_probs=127.8

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..++++|+||||+|+||+++++.|+++|++|++++|++        +..+.+ ..... ..+++++.+|+++++++.++
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~   71 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE--------NKLKRMKKTLSK-YGNIHYVVGDVSSTESARNV   71 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHh-cCCeEEEECCCCCHHHHHHH
Confidence            655678999999999999999999999999999999987        444333 11111 12578899999999988776


Q ss_pred             Hc-------CCCEEEEccccCCCC---CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccC
Q 025660           80 IA-------GCTGVLHVATPVDFE---DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                      ++       .+|.++|+++.....   ..+..+..++.|+.+...+++.+.+. ...++||++||..+.... .      
T Consensus        72 ~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-~------  144 (238)
T PRK05786         72 IEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-S------  144 (238)
T ss_pred             HHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-C------
Confidence            65       369999999864321   11223467889999988888877653 113689999997542211 0      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                    .+...|+.+|...+.+++.++.+   .+++++++|||+++++..
T Consensus       145 --------------~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~  188 (238)
T PRK05786        145 --------------PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE  188 (238)
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence                          02346999999998888777665   389999999999999753

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7.4e-20  Score=152.13  Aligned_cols=187  Identities=20%  Similarity=0.210  Sum_probs=126.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +|+++|||| |+||++++++|. +|++|++++|+.        +..+.+ +++...+.++.++.+|++|++++.++++  
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~   71 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNE--------ENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA   71 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH
Confidence            468999998 689999999996 899999999986        333322 2222223467889999999998888775  


Q ss_pred             ----CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccC---CCcc---ccCCC
Q 025660           82 ----GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYND---KDVD---MMDET  150 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~---~~~~---~~~e~  150 (249)
                          .+|++|||||.... ..++ +.++++|+.++.++++.+.+. ...+++|++||..+.....   ....   .++..
T Consensus        72 ~~~g~id~li~nAG~~~~-~~~~-~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  149 (275)
T PRK06940         72 QTLGPVTGLVHTAGVSPS-QASP-EAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTE  149 (275)
T ss_pred             HhcCCCCEEEECCCcCCc-hhhH-HHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccc
Confidence                48999999997543 2334 489999999999999988753 1135678888876543210   0000   00110


Q ss_pred             CCCchhHh--hhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          151 FWSDVDYI--RKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       151 ~~~~~~~~--~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                      ......+.  .....+...|+.||++.+.+.+.++.+   +|++++.|.||.+.++..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~  207 (275)
T PRK06940        150 ELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLA  207 (275)
T ss_pred             cccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccc
Confidence            00000000  000012457999999988888877655   479999999999998864

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.4e-20  Score=155.69  Aligned_cols=181  Identities=20%  Similarity=0.102  Sum_probs=131.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCC--CCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLP--GASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~--~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++++++||||+++||++++++|+++|++|++++|+.        ++.+. +.++.  ....++.++.+|+++.+++.+++
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~--------~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~   84 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNR--------AKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALG   84 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHH
Confidence            468999999999999999999999999999999986        33222 11111  11236889999999999888776


Q ss_pred             c-------CCCEEEEccccCCC----CCCChHHHhhhhHHhHHHHHHHHHHh---cCCcceEEEEcccceeeccCCCccc
Q 025660           81 A-------GCTGVLHVATPVDF----EDKEPEEVITQRAINGTLGILKSCLK---SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~t~~l~~~~~~---~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      +       .+|++|||||....    ...+..+..+.+|+.+...|.+.+.+   .+ ..++|++||.....+... ...
T Consensus        85 ~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~-~~~  162 (313)
T PRK05854         85 EQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAIN-WDD  162 (313)
T ss_pred             HHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcC-ccc
Confidence            5       37999999997543    12233457899999998887777653   22 469999999875443211 112


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~~  203 (249)
                      +.++.+         ..+...|+.||.+.+.+.+.++.+     .+++++.+.||.|.++..
T Consensus       163 ~~~~~~---------~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        163 LNWERS---------YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             cccccc---------CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence            222211         123457999999999999888653     379999999999988764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=2.8e-20  Score=154.54  Aligned_cols=173  Identities=14%  Similarity=0.115  Sum_probs=126.5

Q ss_pred             CCCCCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            1 MEEGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         1 m~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |..++|++|||||+  ++||++++++|+++|++|++.+|+.     ...+..+.+....  +.. ..+.+|++|.+++.+
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~-----~~~~~~~~~~~~~--~~~-~~~~~Dv~d~~~v~~   72 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE-----ALKKRVEPIAQEL--GSD-YVYELDVSKPEHFKS   72 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH-----HHHHHHHHHHHhc--CCc-eEEEecCCCHHHHHH
Confidence            66677899999997  7999999999999999999998874     1112223222111  123 578999999998888


Q ss_pred             HHc-------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccC
Q 025660           79 AIA-------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~  141 (249)
                      +++       ++|++|||||....         ...+.++..+++|+.++..+.+.+.+. ...++||++||.....+.+
T Consensus        73 ~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~  152 (274)
T PRK08415         73 LAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVP  152 (274)
T ss_pred             HHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCC
Confidence            775       47999999997431         112233578999999998888877653 1136899999965432111


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                            ....|+.||.+.+.+.+.++.+   +|++++.|.||.|.++..
T Consensus       153 ----------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~  195 (274)
T PRK08415        153 ----------------------HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAA  195 (274)
T ss_pred             ----------------------cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence                                  1246999999988888887765   489999999999988753

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.8e-20  Score=152.89  Aligned_cols=169  Identities=17%  Similarity=0.106  Sum_probs=124.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+.        ++.+.. .++..  .+.++..+.+|++|.+++.+++
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   78 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDE--------ERLASAEARLREKFPGARLLAARCDVLDEADVAAFA   78 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHH
Confidence            357899999999999999999999999999999987        333322 11111  1236778999999999888776


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       .+|++|||||....     ...+.+...+++|+.+...+++.+    ++.+ .++||++||.....+.+.  
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--  155 (265)
T PRK07062         79 AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEPH--  155 (265)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCCC--
Confidence            5       47999999997532     112233477888988766666555    4444 579999999765432211  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                          ...|+.+|.+.+.+.+.++.+   .|++++.|+||.+.++..
T Consensus       156 --------------------~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~  197 (265)
T PRK07062        156 --------------------MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQW  197 (265)
T ss_pred             --------------------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchh
Confidence                                246999999888887776655   489999999999988754

>PRK12742 oxidoreductase; Provisional

Probab=99.85  E-value=5.9e-20  Score=149.14  Aligned_cols=168  Identities=15%  Similarity=0.110  Sum_probs=124.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|++|+++.|+..       +..+.+....    +...+.+|++|.+++.++++  
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~-------~~~~~l~~~~----~~~~~~~D~~~~~~~~~~~~~~   73 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK-------DAAERLAQET----GATAVQTDSADRDAVIDVVRKS   73 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCH-------HHHHHHHHHh----CCeEEecCCCCHHHHHHHHHHh
Confidence            3578999999999999999999999999988776431       2333321111    24678899999998888776  


Q ss_pred             -CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCCCCCc
Q 025660           82 -GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (249)
Q Consensus        82 -~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (249)
                       ++|++||+||....     ...+.++..+++|+.++.++++.+.+. ...+++|++||..+....              
T Consensus        74 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------------  139 (237)
T PRK12742         74 GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMP--------------  139 (237)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCC--------------
Confidence             38999999997533     111233588999999999988766653 224699999996531110              


Q ss_pred             hhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                             ..+...|+.+|.+.+.+++.++.+   .++++++|+||.+.++..
T Consensus       140 -------~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~  184 (237)
T PRK12742        140 -------VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDAN  184 (237)
T ss_pred             -------CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcc
Confidence                   012457999999999999887665   379999999999998864

>PRK06484 short chain dehydrogenase; Validated

Probab=99.85  E-value=6.6e-20  Score=165.38  Aligned_cols=168  Identities=17%  Similarity=0.176  Sum_probs=131.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      .++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..  +.+...+.+|++|++++.++++  
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~  337 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA--------EGAKKLAEAL--GDEHLSVQADITDEAAVESAFAQI  337 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--CCceeEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987        5544443221  2356778999999998888775  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                           .+|++|||||....      ...+.++..+++|+.++.++++.+.+. ...++||++||..++.+.+        
T Consensus       338 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  409 (520)
T PRK06484        338 QARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP--------  409 (520)
T ss_pred             HHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC--------
Confidence                 47999999997532      111233488999999999999887764 2146999999987643321        


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                    +...|+.+|...+.+.+.++.+.   |+++++|+||.|.++..
T Consensus       410 --------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  452 (520)
T PRK06484        410 --------------PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAV  452 (520)
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchh
Confidence                          13569999999999988887654   79999999999998864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.85  E-value=5.1e-20  Score=170.61  Aligned_cols=152  Identities=18%  Similarity=0.161  Sum_probs=115.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +.|+||||||+||||++|++.|.++|++|..                               ..+|++|.+.+.+.++  
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------------------~~~~l~d~~~v~~~i~~~  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------------------GKGRLEDRSSLLADIRNV  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------------------eccccccHHHHHHHHHhh
Confidence            3468999999999999999999999998731                               1245788888888876  


Q ss_pred             CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccC----CCccccCCCCC
Q 025660           82 GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND----KDVDMMDETFW  152 (249)
Q Consensus        82 ~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~----~~~~~~~e~~~  152 (249)
                      ++|+||||||....     .+.++. ..+++|+.++.+|+++|++.+ + +++++||..+|.+..    ....+++|+++
T Consensus       428 ~pd~Vih~Aa~~~~~~~~~~~~~~~-~~~~~N~~gt~~l~~a~~~~g-~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~  504 (668)
T PLN02260        428 KPTHVFNAAGVTGRPNVDWCESHKV-ETIRANVVGTLTLADVCRENG-L-LMMNFATGCIFEYDAKHPEGSGIGFKEEDK  504 (668)
T ss_pred             CCCEEEECCcccCCCCCChHHhCHH-HHHHHHhHHHHHHHHHHHHcC-C-eEEEEcccceecCCcccccccCCCCCcCCC
Confidence            68999999998642     123444 889999999999999999998 6 577888877664421    12346777654


Q ss_pred             CchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                      +        ..|.+.|+.||.++|.+++.+.     +..++|+.++|+..
T Consensus       505 ~--------~~~~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~  541 (668)
T PLN02260        505 P--------NFTGSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSD  541 (668)
T ss_pred             C--------CCCCChhhHHHHHHHHHHHhhh-----hheEEEEEEecccC
Confidence            2        1235789999999999998863     45777888888654

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=6.6e-20  Score=150.56  Aligned_cols=168  Identities=14%  Similarity=0.120  Sum_probs=125.8

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+++||||+  +.||++++++|+++|++|++.+|+.        ...+.+.+...  .++..+.+|++|+++++++++
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~--------~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~   75 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND--------RMKKSLQKLVD--EEDLLVECDVASDESIERAFA   75 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch--------HHHHHHHhhcc--CceeEEeCCCCCHHHHHHHHH
Confidence            45899999999  7999999999999999999998874        22222333222  257789999999998887765


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             ++|++|||||....         ...+.++..+++|+.++..+.+.+.+. ...+++|++||.....+.+   
T Consensus        76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~---  152 (252)
T PRK06079         76 TIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIP---  152 (252)
T ss_pred             HHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCC---
Confidence                   47999999997531         111223478899999988888877653 1136899999965422111   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                         ....|+.||.+.+.+.+.++.+   +|++++.|.||.|-++..
T Consensus       153 -------------------~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~  195 (252)
T PRK06079        153 -------------------NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAV  195 (252)
T ss_pred             -------------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccc
Confidence                               1346999999999888887765   489999999999988854

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=4e-20  Score=153.43  Aligned_cols=170  Identities=15%  Similarity=0.035  Sum_probs=123.4

Q ss_pred             CCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||++  +||++++++|+++|++|++.+|+.     ...+..+.+.+.  .+ ....+.+|++|++++.++++
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~-----~~~~~~~~~~~~--~g-~~~~~~~Dv~d~~~v~~~~~   77 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE-----ALGKRVKPLAES--LG-SDFVLPCDVEDIASVDAVFE   77 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch-----HHHHHHHHHHHh--cC-CceEEeCCCCCHHHHHHHHH
Confidence            457899999996  999999999999999999998865     111122222111  11 23468999999998888765


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             .+|++|||||....         ...+.++..+.+|+.++.++++++.+. ...++||++||.....+.+.  
T Consensus        78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~--  155 (271)
T PRK06505         78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPN--  155 (271)
T ss_pred             HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCc--
Confidence                   47999999997531         112233478899999988888766542 11368999999765322111  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                          ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.++..
T Consensus       156 --------------------~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~  197 (271)
T PRK06505        156 --------------------YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAG  197 (271)
T ss_pred             --------------------cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccc
Confidence                                246999999988888887766   489999999999988753

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.3e-19  Score=149.50  Aligned_cols=171  Identities=20%  Similarity=0.180  Sum_probs=126.9

Q ss_pred             CCCeEEEeccch-hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTG-FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      ++++++||||+| .||+++++.|+++|++|++++|+.        ++.+.. +.+..  ...++..+.+|+++++++.++
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   87 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHE--------RRLGETADELAAELGLGRVEAVVCDVTSEAQVDAL   87 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHH
Confidence            357899999997 799999999999999999999876        333222 11111  113578899999999988887


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       .+|+||||||....     ...+.+...+.+|+.++..+++.+.+    .+..+++|++||...+.+..  
T Consensus        88 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~--  165 (262)
T PRK07831         88 IDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH--  165 (262)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC--
Confidence            75       47999999997432     11122347788999999888887654    22136899999865432211  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                          +...|+.+|.+.+.+.+.++.+   +++++++|+||.+.+|...
T Consensus       166 --------------------~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~  209 (262)
T PRK07831        166 --------------------GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLA  209 (262)
T ss_pred             --------------------CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccc
Confidence                                1346999999999999988866   4899999999999998643

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.85  E-value=3.8e-20  Score=150.63  Aligned_cols=169  Identities=18%  Similarity=0.193  Sum_probs=123.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      |++|||||+|+||++++++|+++|++|+++.|+..       +..+.+ .+......++.++.+|+++++++.++++   
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE-------ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVE   73 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999988331       222221 1221123468899999999998877765   


Q ss_pred             ----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          .+|+|||+||....     ...+..+..+..|+.++..+++.+    ++.+ .++||++||.....+..       
T Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~-------  145 (242)
T TIGR01829        74 AELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQF-------  145 (242)
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCC-------
Confidence                47999999997532     111223477889999987765554    4445 67999999965432211       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                     ....|+.+|...+.+++.++.+   .+++++.++||.+.++...
T Consensus       146 ---------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~  189 (242)
T TIGR01829       146 ---------------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM  189 (242)
T ss_pred             ---------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc
Confidence                           1346999999888888877654   4899999999999988653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.85  E-value=1.1e-19  Score=147.70  Aligned_cols=163  Identities=20%  Similarity=0.213  Sum_probs=122.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      +|++|||||+|+||++++++|+++|++|++++|++.       +..+.+...     +++++.+|+++++++.++++   
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~-------~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~   69 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY-------PAIDGLRQA-----GAQCIQADFSTNAGIMAFIDELK   69 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch-------hHHHHHHHc-----CCEEEEcCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999862       122222221     35789999999988877765   


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----C-CcceEEEEcccceeeccCCCcccc
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----G-TVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                          .+|++||+||.....     ..+.++..+++|+.++..+.+.+.+.    + ..+++|++||.....+.+      
T Consensus        70 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~------  143 (236)
T PRK06483         70 QHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSD------  143 (236)
T ss_pred             hhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCC------
Confidence                379999999964321     12334588999999988777766542    1 135899999965422111      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGP  201 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~  201 (249)
                                      ....|+.||...+.+++.++.+.  ++++++|+||.+..+
T Consensus       144 ----------------~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~  183 (236)
T PRK06483        144 ----------------KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFN  183 (236)
T ss_pred             ----------------CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecC
Confidence                            13469999999999999988874  599999999998653

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.85  E-value=7.3e-20  Score=150.90  Aligned_cols=172  Identities=15%  Similarity=0.096  Sum_probs=123.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|+.|+++.|+..       +....+ .++...+.++.++.+|++|.+++.++++ 
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~   78 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDE-------EEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQT   78 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Confidence            4689999999999999999999999999998888641       222211 1222223467789999999998888765 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|++||+||.....     ..+.++..+.+|+.++..+++    .+.+.+..+++|++||...+.+.+     
T Consensus        79 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~-----  153 (261)
T PRK08936         79 AVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWP-----  153 (261)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCC-----
Confidence                  479999999975431     112234778999887765544    445544246999999965432211     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                       +...|+.+|.+.+.+.+.++.+   .++++++|+||.+.+|...
T Consensus       154 -----------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~  197 (261)
T PRK08936        154 -----------------LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_pred             -----------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccc
Confidence                             2356999998877777766554   3899999999999998643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.84  E-value=5.2e-20  Score=169.89  Aligned_cols=167  Identities=20%  Similarity=0.239  Sum_probs=124.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+. .+..  ....+..+.+|++|++++.+++
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~--------~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~  484 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNL--------EAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF  484 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence            357899999999999999999999999999999986        3333221 1111  1125678999999999998887


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||.....     ..+.++..+++|+.+...+.+.+    ++.+..++||++||..++++.+.  
T Consensus       485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~--  562 (676)
T TIGR02632       485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN--  562 (676)
T ss_pred             HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC--
Confidence            6       589999999975431     11223477888988877765544    33332358999999766543321  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVG  200 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g  200 (249)
                                          ...|+.||.+.+.+++.++.+   .|++++.|+|+.|+.
T Consensus       563 --------------------~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       563 --------------------ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ  601 (676)
T ss_pred             --------------------CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence                                357999999999999988776   379999999999973

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1e-19  Score=146.58  Aligned_cols=168  Identities=17%  Similarity=0.145  Sum_probs=128.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      |++++||||+|+||++++++|+++|++|++++|+.        +..+.+...     +++++.+|+++.+++.++++   
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~--------~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~   67 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDA--------AALAALQAL-----GAEALALDVADPASVAGLAWKLD   67 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCH--------HHHHHHHhc-----cceEEEecCCCHHHHHHHHHHhc
Confidence            35899999999999999999999999999999986        444444332     35689999999998888653   


Q ss_pred             --CCCEEEEccccCCCC-------CCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccccCCC
Q 025660           82 --GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 --~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                        .+|+|||++|.....       ..+..+..+++|+.++.++++.+.+.  ...++++++||.....+...        
T Consensus        68 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  139 (222)
T PRK06953         68 GEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--------  139 (222)
T ss_pred             CCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc--------
Confidence              489999999976320       11223478999999999999988752  11468999999765433211        


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-CCcEEEeecCeEeCCCCC
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~vrp~~v~g~~~~  204 (249)
                                 ..+.+.|+.+|...+.+++.++.++ +++++.++||.+.++...
T Consensus       140 -----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~  183 (222)
T PRK06953        140 -----------GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG  183 (222)
T ss_pred             -----------CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC
Confidence                       0012459999999999999887665 799999999999998744

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.84  E-value=2.1e-20  Score=149.42  Aligned_cols=197  Identities=18%  Similarity=0.162  Sum_probs=152.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      -.+-|.|||||+|+++|.+|.+.|.+|++--|..+       ....+++-+ +....+-++..|++|++++.++++...+
T Consensus        62 iVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~-------~~~r~lkvm-GdLGQvl~~~fd~~DedSIr~vvk~sNV  133 (391)
T KOG2865|consen   62 IVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDE-------YDPRHLKVM-GDLGQVLFMKFDLRDEDSIRAVVKHSNV  133 (391)
T ss_pred             eEEEEecccccccHHHHHHHhhcCCeEEEeccCCc-------cchhheeec-ccccceeeeccCCCCHHHHHHHHHhCcE
Confidence            45678999999999999999999999999988762       233334333 2335688999999999999999999999


Q ss_pred             EEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCC
Q 025660           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (249)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (249)
                      |||+.|-.-.  .... .+.++|+.+.++|++.|++.+ +.+||++|+..+   +-.                     ..
T Consensus       134 VINLIGrd~e--Tknf-~f~Dvn~~~aerlAricke~G-VerfIhvS~Lga---nv~---------------------s~  185 (391)
T KOG2865|consen  134 VINLIGRDYE--TKNF-SFEDVNVHIAERLARICKEAG-VERFIHVSCLGA---NVK---------------------SP  185 (391)
T ss_pred             EEEeeccccc--cCCc-ccccccchHHHHHHHHHHhhC-hhheeehhhccc---ccc---------------------Ch
Confidence            9999996322  2222 678899999999999999999 999999998552   211                     13


Q ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccc-cc-cccccccchhhHHHh
Q 025660          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI-CC-VMNRSHTLFVYAIAF  243 (249)
Q Consensus       166 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~i~v~d~a~  243 (249)
                      +-|-.+|+++|..+++..+    ..+|+||..+||..+     +|+..+...++.-..+++ .. .+..-..+|+-|+|.
T Consensus       186 Sr~LrsK~~gE~aVrdafP----eAtIirPa~iyG~eD-----rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa  256 (391)
T KOG2865|consen  186 SRMLRSKAAGEEAVRDAFP----EATIIRPADIYGTED-----RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAA  256 (391)
T ss_pred             HHHHHhhhhhHHHHHhhCC----cceeechhhhcccch-----hHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHH
Confidence            4599999999999998655    579999999999765     345555555554444444 33 345669999999999


Q ss_pred             hhhc
Q 025660          244 AFAF  247 (249)
Q Consensus       244 a~~~  247 (249)
                      +++=
T Consensus       257 ~Ivn  260 (391)
T KOG2865|consen  257 AIVN  260 (391)
T ss_pred             HHHH
Confidence            9863

>PRK05855 short chain dehydrogenase; Validated

Probab=99.84  E-value=6.4e-20  Score=167.21  Aligned_cols=171  Identities=18%  Similarity=0.115  Sum_probs=130.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ..+++|||||+|+||++++++|.++|++|++++|+.        ++.+.+ ..+...+.++.++.+|++|++++.++++ 
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  385 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDE--------AAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEW  385 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            347899999999999999999999999999999986        443332 1222223467899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+||||||....     ...+..+..+++|+.|+.++++.+.    +.+..++||++||..++.+.+.    
T Consensus       386 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----  461 (582)
T PRK05855        386 VRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS----  461 (582)
T ss_pred             HHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC----
Confidence                  37999999998543     1122334788999999988877654    3332369999999877543311    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                        ...|+.||.+.+.+.+.++.+   +|+++++|+||.|-++...
T Consensus       462 ------------------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  504 (582)
T PRK05855        462 ------------------LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVA  504 (582)
T ss_pred             ------------------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchh
Confidence                              357999999988888877655   4899999999999887543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.84  E-value=2.6e-20  Score=141.16  Aligned_cols=181  Identities=17%  Similarity=0.186  Sum_probs=134.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +.+..+||||+++||+++++.|.++|++|.+.+++.        ...+. ...+++. ..-.-+.||+.++++++..++ 
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~--------~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e   83 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDS--------AAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEE   83 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecch--------hhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHH
Confidence            346889999999999999999999999999999987        22222 2233332 234568999999988877665 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc----C-CcceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS----G-TVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~  144 (249)
                            .++++|||||+...      ..++| +..+.+|+.|++...+++.+.    + ...+||++||+.+..+.-+  
T Consensus        84 ~~k~~g~psvlVncAGItrD~~Llrmkq~qw-d~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G--  160 (256)
T KOG1200|consen   84 MEKSLGTPSVLVNCAGITRDGLLLRMKQEQW-DSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG--  160 (256)
T ss_pred             HHHhcCCCcEEEEcCccccccceeeccHHHH-HHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc--
Confidence                  47999999999765      34455 499999999988877776543    2 1349999999865444333  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHH----HHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHH
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKT----LTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~  217 (249)
                                          ...|++||.    ......+++++ .+++++.|-||+|-+|+.....+..+..+...
T Consensus       161 --------------------QtnYAAsK~GvIgftktaArEla~-knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~  216 (256)
T KOG1200|consen  161 --------------------QTNYAASKGGVIGFTKTAARELAR-KNIRVNVVLPGFIATPMTEAMPPKVLDKILGM  216 (256)
T ss_pred             --------------------chhhhhhcCceeeeeHHHHHHHhh-cCceEeEeccccccChhhhhcCHHHHHHHHcc
Confidence                                345999997    56666777766 58999999999999999876555544444443

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=3.7e-19  Score=146.40  Aligned_cols=176  Identities=15%  Similarity=0.054  Sum_probs=124.1

Q ss_pred             CCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCccc---CCchhhhh-hccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEH---RNSKDLSF-LKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      +++++|||||+|  +||++++++|+++|++|+++.|....+..   ...+.... .+++...+.++..+.+|+++.+++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            457999999995  89999999999999999987654211110   01111111 1222233456788999999999888


Q ss_pred             HHHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccC
Q 025660           78 AAIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~  141 (249)
                      ++++       .+|++||+||....     ...+.++..+++|+.+...+.+.+    .+.+ .++||++||..+..+.+
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~  163 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQGPMV  163 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCCCCC
Confidence            8875       37999999997533     111223478999999988876544    3333 46999999976532111


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                            +...|+.+|.+.+.+.+.++.+   ++++++.|+||.+.++.
T Consensus       164 ----------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~  205 (256)
T PRK12859        164 ----------------------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW  205 (256)
T ss_pred             ----------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence                                  2357999999999998887765   48999999999998764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=1.8e-19  Score=148.45  Aligned_cols=171  Identities=13%  Similarity=0.062  Sum_probs=124.7

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+++||||+  +.||++++++|+++|++|++.+|+.     +..+..+.+.+... ..++..+.+|++|++++.++++
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~-----~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE-----RLEKEVRELADTLE-GQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc-----cchHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHH
Confidence            45799999997  8999999999999999999988764     11133333322111 2467889999999998888775


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             ++|++|||||....         ...+.+...+++|+.+...+++.+.+.- ..++||++||..+..+.+   
T Consensus        80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---  156 (257)
T PRK08594         80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQ---  156 (257)
T ss_pred             HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCC---
Confidence                   47999999986431         1112233678899999888777766431 136999999976532211   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                         ....|+.||.+.+.+.+.++.+   +|++++.|.||.+.++.
T Consensus       157 -------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  198 (257)
T PRK08594        157 -------------------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLS  198 (257)
T ss_pred             -------------------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHh
Confidence                               1346999999999888887765   37999999999998874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.84  E-value=6.2e-20  Score=153.32  Aligned_cols=172  Identities=17%  Similarity=0.109  Sum_probs=121.2

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH------
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI------   80 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   80 (249)
                      +||||||||+||++++++|+++|++|++++|++        ++..        ..+++.+.+|+.|++++..++      
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~--------~~~~--------~~~~~~~~~d~~d~~~l~~a~~~~~~~   64 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSS--------SSSA--------GPNEKHVKFDWLDEDTWDNPFSSDDGM   64 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCC--------cccc--------CCCCccccccCCCHHHHHHHHhcccCc
Confidence            489999999999999999999999999999997        2111        124567789999999999998      


Q ss_pred             cC-CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           81 AG-CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        81 ~~-~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++ +|.|+|+++....    .        .....+++++|++.+ +++||++||..+....                   
T Consensus        65 ~g~~d~v~~~~~~~~~----~--------~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~-------------------  112 (285)
T TIGR03649        65 EPEISAVYLVAPPIPD----L--------APPMIKFIDFARSKG-VRRFVLLSASIIEKGG-------------------  112 (285)
T ss_pred             CCceeEEEEeCCCCCC----h--------hHHHHHHHHHHHHcC-CCEEEEeeccccCCCC-------------------
Confidence            56 9999999874221    1        234468899999998 9999999986532110                   


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhh
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  239 (249)
                                ..+...|..++.   ..+++++++||+.+++......       ....+.....+....++...+|++++
T Consensus       113 ----------~~~~~~~~~l~~---~~gi~~tilRp~~f~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~v~~~  172 (285)
T TIGR03649       113 ----------PAMGQVHAHLDS---LGGVEYTVLRPTWFMENFSEEF-------HVEAIRKENKIYSATGDGKIPFVSAD  172 (285)
T ss_pred             ----------chHHHHHHHHHh---ccCCCEEEEeccHHhhhhcccc-------cccccccCCeEEecCCCCccCcccHH
Confidence                      011222333322   1489999999999886542111       11112222333445678888999999


Q ss_pred             HHHhhhh
Q 025660          240 AIAFAFA  246 (249)
Q Consensus       240 d~a~a~~  246 (249)
                      |++++++
T Consensus       173 Dva~~~~  179 (285)
T TIGR03649       173 DIARVAY  179 (285)
T ss_pred             HHHHHHH
Confidence            9999865

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.84  E-value=1.4e-20  Score=147.59  Aligned_cols=225  Identities=19%  Similarity=0.109  Sum_probs=169.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC--CCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      |..||||-||.-|++|++.|+.+|++|+++.|++   ...+..+.++|-..+.  .+.....+.+|++|...+.+++.. 
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRs---SsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRS---SSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeec---cccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            5789999999999999999999999999999876   3455667777644443  235678899999999999999984 


Q ss_pred             -CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                       ++-|+|+|+..+.  +.+-+. ..-++...||.+|+++++..+  ..-+|--.||...|+  .....|..|.+|.    
T Consensus       106 kPtEiYnLaAQSHVkvSFdlpe-YTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyG--kv~e~PQsE~TPF----  178 (376)
T KOG1372|consen  106 KPTEVYNLAAQSHVKVSFDLPE-YTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYG--KVQEIPQSETTPF----  178 (376)
T ss_pred             CchhhhhhhhhcceEEEeeccc-ceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcc--cccCCCcccCCCC----
Confidence             6999999998776  333333 677888999999999998764  123777777776443  2345688888874    


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHHHHHcCCC-cccccccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGNV-KLKICCVMNRSH  234 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  234 (249)
                           -|+++|+.+|..+-+++-.|.+.+++-.|.=...+--+|.....  ...+.....+...+.+ .+.+++-+..||
T Consensus       179 -----yPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RD  253 (376)
T KOG1372|consen  179 -----YPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRD  253 (376)
T ss_pred             -----CCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcc
Confidence                 38999999999999999999998888777655555555544322  1111223333333433 677899999999


Q ss_pred             cchhhHHHhhh
Q 025660          235 TLFVYAIAFAF  245 (249)
Q Consensus       235 ~i~v~d~a~a~  245 (249)
                      |-|..|.++|+
T Consensus       254 WGhA~dYVEAM  264 (376)
T KOG1372|consen  254 WGHAGDYVEAM  264 (376)
T ss_pred             cchhHHHHHHH
Confidence            99999999986

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.2e-19  Score=147.64  Aligned_cols=172  Identities=15%  Similarity=0.143  Sum_probs=122.8

Q ss_pred             CCC-CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC-CCCCeEEEEcCCCC--hhh
Q 025660            1 MEE-GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSH--PDG   75 (249)
Q Consensus         1 m~~-~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~Dl~~--~~~   75 (249)
                      |.. ++++++||||+|+||++++++|+++|++|++++|+.        +..+.+ .++.. .......+.+|+.+  .++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   72 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQ--------KKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKE   72 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCh--------HHHHHHHHHHHHcCCCCcceEEeeecccchHH
Confidence            543 347999999999999999999999999999999987        333322 11111 12245678899875  344


Q ss_pred             HHHHH--------cCCCEEEEccccCCC----CCC--ChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEccccee
Q 025660           76 FDAAI--------AGCTGVLHVATPVDF----EDK--EPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAV  137 (249)
Q Consensus        76 ~~~~~--------~~~d~vih~a~~~~~----~~~--~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~  137 (249)
                      +.+++        ..+|+|||+||....    ...  +.+...+++|+.++.++++.+.+    .+ .+++|++||..+.
T Consensus        73 ~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~  151 (239)
T PRK08703         73 FEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGE  151 (239)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccc
Confidence            44443        357999999996421    111  12236789999998888887754    33 4799999996543


Q ss_pred             eccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc----CCcEEEeecCeEeCCCC
Q 025660          138 FYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH----GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~vrp~~v~g~~~  203 (249)
                      .+..                      ....|+.||++.+.+++.++.+.    ++++++++||.|++|..
T Consensus       152 ~~~~----------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~  199 (239)
T PRK08703        152 TPKA----------------------YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR  199 (239)
T ss_pred             cCCC----------------------CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence            2110                      12469999999999998887764    59999999999999964

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.84  E-value=6.2e-20  Score=151.34  Aligned_cols=170  Identities=13%  Similarity=0.129  Sum_probs=122.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+++||++++++|+++|++|+++.|+..       +..+.+ .++.. .+.++.++.+|++|++++.++++
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   79 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNV-------EEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFK   79 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            4579999999999999999999999999988876531       222222 11111 23467899999999998888776


Q ss_pred             -------CCCEEEEccccCCC-----------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeec
Q 025660           82 -------GCTGVLHVATPVDF-----------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFY  139 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~  139 (249)
                             ++|++|||||....           ...+.....+.+|+.+...+.+.+    ++.+ .++||++||.....+
T Consensus        80 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~  158 (260)
T PRK08416         80 KIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVY  158 (260)
T ss_pred             HHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccC
Confidence                   47999999985421           011222367788887766655544    3434 469999999754322


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                      .+.                      ...|+.||.+.+.+.+.++.+.   |++++.|.||.+.++..
T Consensus       159 ~~~----------------------~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~  203 (260)
T PRK08416        159 IEN----------------------YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDAL  203 (260)
T ss_pred             CCC----------------------cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhh
Confidence            211                      2369999999999999887764   89999999999988753

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.84  E-value=1.1e-19  Score=147.89  Aligned_cols=167  Identities=17%  Similarity=0.235  Sum_probs=124.1

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-----
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-----   81 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   81 (249)
                      |+||||+|+||++++++|+++|++|++++|+..       +..+.+ .++.....++.++.+|+++.+++.++++     
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGR-------SDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAE   73 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999887641       222221 2222223468899999999998887765     


Q ss_pred             --CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH-----hcCCcceEEEEcccceeeccCCCccccCC
Q 025660           82 --GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL-----KSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 --~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                        .+|.+||+||....     ...+.++.++++|+.++.++++.+.     +.+ .++||++||...+++.+.       
T Consensus        74 ~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~-------  145 (239)
T TIGR01831        74 HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRG-------  145 (239)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCCC-------
Confidence              36999999997533     1122234789999999999988652     233 579999999776544321       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                     ...|+.+|.+.+.+.+.++.+   .+++++.++||.+.++...
T Consensus       146 ---------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  188 (239)
T TIGR01831       146 ---------------QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLA  188 (239)
T ss_pred             ---------------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccch
Confidence                           346999999888777776654   4899999999999888653

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=1.3e-19  Score=149.24  Aligned_cols=170  Identities=14%  Similarity=0.017  Sum_probs=123.6

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+  +.||++++++|+++|++|++.+|+..     ..+..+.+.+..   .....+.+|++|++++.++++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~-----~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~   80 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK-----ARPYVEPLAEEL---DAPIFLPLDVREPGQLEAVFA   80 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh-----hHHHHHHHHHhh---ccceEEecCcCCHHHHHHHHH
Confidence            46899999998  59999999999999999999998751     111122222111   134578999999998887765


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             .+|++|||||....         ...+.++..+++|+.++.++++.+.+. ...+++|++||.......+   
T Consensus        81 ~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~---  157 (258)
T PRK07533         81 RIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVE---  157 (258)
T ss_pred             HHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCc---
Confidence                   47999999997431         111233588999999999988877543 1136899999865421110   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                         ....|+.||.+.+.+.+.++.+   +|++++.|.||.+.++..
T Consensus       158 -------------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~  200 (258)
T PRK07533        158 -------------------NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAA  200 (258)
T ss_pred             -------------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhh
Confidence                               1246999999988888877665   489999999999988764

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.2e-19  Score=144.90  Aligned_cols=170  Identities=18%  Similarity=0.159  Sum_probs=125.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      |++++||||+|+||++++++|+++|++|++++|++        +..+.+.+.    .++.++.+|++|++++.++++   
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~   68 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGP--------QQDTALQAL----PGVHIEKLDMNDPASLDQLLQRLQ   68 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCC--------cchHHHHhc----cccceEEcCCCCHHHHHHHHHHhh
Confidence            36899999999999999999999999999999987        333333222    246788999999998888776   


Q ss_pred             --CCCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeeccCCCccccCCC
Q 025660           82 --GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 --~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                        ++|+|||+||....       ...+..+..+.+|+.++..+++.+.+.-  ...+++++||..+......        
T Consensus        69 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~--------  140 (225)
T PRK08177         69 GQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD--------  140 (225)
T ss_pred             cCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC--------
Confidence              48999999987532       0112234677889999999888876431  1367888988543211100        


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                 ..+...|+.+|.+.+.+++.++.+   ++++++.++||.+-++....
T Consensus       141 -----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        141 -----------GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             -----------CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence                       001235999999999999988765   37999999999999987543

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.3e-19  Score=151.59  Aligned_cols=175  Identities=17%  Similarity=0.126  Sum_probs=123.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCccc-CCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH-RNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++|||||+++||++++++|+++|++|++++|+.....+ +..+.... ..++...+.++..+.+|++|++++.++++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            45799999999999999999999999999998876410000 00011111 22222223467889999999998887765


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cC-----CcceEEEEcccceeecc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SG-----TVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~-----~~~~~v~~SS~~~~~~~  140 (249)
                             .+|++|||||....     ...+.++..+++|+.++..+++++.+    ..     ..++||++||..+..+.
T Consensus        85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  164 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS  164 (286)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC
Confidence                   47999999997542     11223358899999998888776642    11     02589999997764433


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCC
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGP  201 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~  201 (249)
                      +.                      ...|+.||.+.+.+.+.++.+   +|++++.|.|| +.++
T Consensus       165 ~~----------------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~  205 (286)
T PRK07791        165 VG----------------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR  205 (286)
T ss_pred             CC----------------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC
Confidence            21                      346999999988888877665   48999999998 5444

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=1.4e-19  Score=149.34  Aligned_cols=173  Identities=15%  Similarity=0.084  Sum_probs=122.3

Q ss_pred             CCC-CCCeEEEecc--chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHH
Q 025660            1 MEE-GKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         1 m~~-~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      |.. +++++|||||  +++||++++++|+++|++|++..|+.     +..+..+.+..   .......+.+|++|+++++
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~   72 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-----KLEERVRKMAA---ELDSELVFRCDVASDDEIN   72 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-----HHHHHHHHHHh---ccCCceEEECCCCCHHHHH
Confidence            443 3478999997  67999999999999999999887754     11122222321   1123457899999999988


Q ss_pred             HHHc-------CCCEEEEccccCCCC----------CCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceee
Q 025660           78 AAIA-------GCTGVLHVATPVDFE----------DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVF  138 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~----------~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~  138 (249)
                      ++++       ++|++|||||.....          ..+.++..+++|+.++..+.+.+.+.  +..++||++||.....
T Consensus        73 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~  152 (261)
T PRK08690         73 QVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR  152 (261)
T ss_pred             HHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc
Confidence            8875       489999999985320          11223466788998888777765432  1136899999976532


Q ss_pred             ccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          139 YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       139 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                      +.+                      ....|+.||.+.+.+.+.++.+   +|++++.|.||.+.++..
T Consensus       153 ~~~----------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~  198 (261)
T PRK08690        153 AIP----------------------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAA  198 (261)
T ss_pred             CCC----------------------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhh
Confidence            211                      1346999999998888877554   489999999999988753

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.7e-20  Score=149.78  Aligned_cols=166  Identities=19%  Similarity=0.146  Sum_probs=120.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC--   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--   83 (249)
                      |++|||||+|+||++++++|+++|++|++++|+..       +....+.+.  ...+++++.+|+++++++.++++.+  
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~-------~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN-------KELTKLAEQ--YNSNLTFHSLDLQDVHELETNFNEILS   72 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch-------HHHHHHHhc--cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999998751       222222221  1346788999999999988877632  


Q ss_pred             ---------CEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           84 ---------TGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        84 ---------d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                               .++||+||....      ...+.+...+++|+.++..+++.+    ++.+..++||++||..+..+.    
T Consensus        73 ~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----  148 (251)
T PRK06924         73 SIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY----  148 (251)
T ss_pred             hcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC----
Confidence                     179999987432      112223477888988866666554    333324689999997643211    


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~  202 (249)
                                        .+...|+.+|.+.+.+++.++.+     .+++++.|+||.+.++.
T Consensus       149 ------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  193 (251)
T PRK06924        149 ------------------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM  193 (251)
T ss_pred             ------------------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence                              12457999999999999888755     36999999999988765

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.83  E-value=1.5e-19  Score=149.01  Aligned_cols=173  Identities=12%  Similarity=0.004  Sum_probs=125.2

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+++||||+  +.||++++++|+++|++|++..|+...  .+..+..+.+.+   .......+.+|++|++++.++++
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEK--GRFEKKVRELTE---PLNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCccc--chHHHHHHHHHh---ccCcceEeecCcCCHHHHHHHHH
Confidence            56889999986  799999999999999999888765410  011122223322   12246688999999998887775


Q ss_pred             -------CCCEEEEccccCC------C---CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVD------F---EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~------~---~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             .+|++|||||...      .   ...+.++..+++|+.++..+++.+.+. ...++||++||.....+.+   
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~---  156 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIP---  156 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCc---
Confidence                   4799999999642      1   112333588999999998888877542 1136999999975432111   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                         ....|+.||.+.+.+.+.++.+.   |++++.|.||.+.++..
T Consensus       157 -------------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~  199 (258)
T PRK07370        157 -------------------NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLAS  199 (258)
T ss_pred             -------------------ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchh
Confidence                               13469999999999999887764   79999999999988753

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=1.8e-19  Score=146.00  Aligned_cols=170  Identities=14%  Similarity=0.116  Sum_probs=131.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++.||||||++++|++++.+|+++|..+++++.+..    ...+..+.....    ++++.++||+++.+++.++.+  
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~----~~~etv~~~~~~----g~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQ----GNEETVKEIRKI----GEAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEecccc----chHHHHHHHHhc----CceeEEEecCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999872    122223333322    278999999999998877765  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHH----HHHHHHHHhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGT----LGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t----~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++|||||+...     ..++..+..+++|+.+.    +.++..+.+.+ .+|||.++|..++.+..+     
T Consensus       109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~g-----  182 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPAG-----  182 (300)
T ss_pred             HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCcc-----
Confidence                 58999999998765     34455568899999874    55777777777 789999999988765543     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH------cCCcEEEeecCeEeCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE------HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~vrp~~v~g~~~~  204 (249)
                                       ...|+.||.++.-+.+.+..+      .|++++.+-|+.+-+.+..
T Consensus       183 -----------------l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~  228 (300)
T KOG1201|consen  183 -----------------LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFD  228 (300)
T ss_pred             -----------------chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccC
Confidence                             346999999887666665433      2699999999998766544

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=2e-19  Score=151.75  Aligned_cols=165  Identities=19%  Similarity=0.168  Sum_probs=122.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+|+||++++++|+++|++|++.+++..       ...+. ..++...+.++..+.+|++|.+++.++++ 
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~-------~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASA-------LDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCch-------hHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999887641       12211 22222234567889999999988888775 


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc--------C--CcceEEEEcccceeeccC
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS--------G--TVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~--------~--~~~~~v~~SS~~~~~~~~  141 (249)
                           ++|+||||||.....     ..+.++..+++|+.++.++++++.+.        +  ..++||++||...+.+..
T Consensus        84 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  163 (306)
T PRK07792         84 AVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV  163 (306)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC
Confidence                 489999999976431     12223478999999999998876421        0  025899999976543321


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCe
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSM  197 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~  197 (249)
                      .                      ...|+.+|.+.+.+.+.++.+   +|+++++|.|+.
T Consensus       164 ~----------------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~  200 (306)
T PRK07792        164 G----------------------QANYGAAKAGITALTLSAARALGRYGVRANAICPRA  200 (306)
T ss_pred             C----------------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence            1                      246999999999998887765   589999999983

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.83  E-value=1.6e-19  Score=153.11  Aligned_cols=172  Identities=18%  Similarity=0.210  Sum_probs=124.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC--CCCCeEEEEcCCCC--hhhHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG--ASERLRIFHADLSH--PDGFDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~--~~~~~~~~~~Dl~~--~~~~~~   78 (249)
                      .++.++||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++..  ...++..+.+|+++  .+.+++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~--------~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~  123 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNP--------DKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKR  123 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHH
Confidence            357899999999999999999999999999999987        4444332 1111  12356778899985  343443


Q ss_pred             H---HcC--CCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCC
Q 025660           79 A---IAG--CTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        79 ~---~~~--~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      +   +.+  +|++|||||....       ...+..+..+++|+.++..+.+.+.    +.+ .++||++||..++.....
T Consensus       124 l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~  202 (320)
T PLN02780        124 IKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSD  202 (320)
T ss_pred             HHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCC
Confidence            3   333  5699999997531       1112234789999999888887764    344 679999999876431100


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                               |           ....|+.||...+.+.+.++.+.   |++++++.||.|.++...
T Consensus       203 ---------p-----------~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        203 ---------P-----------LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             ---------c-----------cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence                     0           13579999999999888887663   899999999999998643

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=2.6e-19  Score=146.46  Aligned_cols=168  Identities=24%  Similarity=0.241  Sum_probs=123.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC-CCCCeEEEEcCCC--ChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLS--HPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~Dl~--~~~~~~~~   79 (249)
                      ..++++||||+|+||.+++++|+++|++|++++|+.        ++.+.+ .++.. ...+..++.+|++  +.+++.++
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~   82 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTE--------EKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQL   82 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCH--------HHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHH
Confidence            457999999999999999999999999999999986        333322 12211 1235677888886  55555544


Q ss_pred             Hc-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCC
Q 025660           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      ++       .+|+|||+|+....      ...+.++..+++|+.++.++++.+.    +.+ .++||++||.....+.. 
T Consensus        83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~-  160 (247)
T PRK08945         83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRA-  160 (247)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCC-
Confidence            33       58999999987432      1122334789999999888888764    344 67999999976533221 


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                                           ....|+.||.+.+.+++.++.+.   ++++++++||.+.++.
T Consensus       161 ---------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~  202 (247)
T PRK08945        161 ---------------------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM  202 (247)
T ss_pred             ---------------------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcc
Confidence                                 13469999999999998887765   6999999999998764

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.7e-19  Score=148.43  Aligned_cols=169  Identities=20%  Similarity=0.236  Sum_probs=122.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCC-CCeEEEEcCCCChhhHHHHHc--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGAS-ERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      |+++||||+|+||++++++|+++|++|++++|+.        +..+.. .++...+ ....++.+|+++++++.++++  
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDA--------DGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADI   72 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHH
Confidence            4799999999999999999999999999999876        333222 2211111 234567899999988877665  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+|||+||....     ...+..+..+++|+.++..+++.+.+    .+..++||++||...+.+.+      
T Consensus        73 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~------  146 (272)
T PRK07832         73 HAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP------  146 (272)
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC------
Confidence                 37999999997533     11122347899999999999998753    22246999999976432211      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                      ....|+.+|...+.+.+.++.+   +++++++++||.+.++...
T Consensus       147 ----------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~  190 (272)
T PRK07832        147 ----------------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVN  190 (272)
T ss_pred             ----------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh
Confidence                            1346999999777777666543   5899999999999998643

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.4e-19  Score=166.06  Aligned_cols=170  Identities=18%  Similarity=0.169  Sum_probs=130.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|.+++.++++ 
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  441 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNG--------EALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD  441 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999987        443332 2222223468899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCC--ChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDF-----EDK--EPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~--~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                            .+|++|||||....     ...  +..+..+++|+.++.++++.+.    +.+ .++||++||..++.+.+.  
T Consensus       442 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--  518 (657)
T PRK07201        442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAPR--  518 (657)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCC--
Confidence                  58999999997432     111  2234789999999888776654    444 579999999876543211  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                          ...|+.||.+.+.+.+.++.+   .++++++|+||.|.++...
T Consensus       519 --------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~  561 (657)
T PRK07201        519 --------------------FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIA  561 (657)
T ss_pred             --------------------cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccC
Confidence                                356999999999998887765   3899999999999998754

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=5e-19  Score=146.11  Aligned_cols=169  Identities=14%  Similarity=0.095  Sum_probs=122.1

Q ss_pred             CCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++++++||||++  .||++++++|+++|++|++.+|+.     +..+..+.+..   .......+.+|++|+++++++++
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-----~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~   76 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-----KLKGRVEEFAA---QLGSDIVLPCDVAEDASIDAMFA   76 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-----hHHHHHHHHHh---ccCCceEeecCCCCHHHHHHHHH
Confidence            357899999985  899999999999999999888764     11122222222   12245678999999999888875


Q ss_pred             -------CCCEEEEccccCCCC----------CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCC
Q 025660           82 -------GCTGVLHVATPVDFE----------DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~----------~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~  143 (249)
                             .+|++|||||.....          ..+.++..+++|+.+...+.+.+... ...++||++||.....+.+. 
T Consensus        77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~-  155 (262)
T PRK07984         77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN-  155 (262)
T ss_pred             HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCC-
Confidence                   379999999964321          11123467889999888888776542 11368999998654211100 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                           ...|+.||.+.+.+.+.++.+   ++++++.|.||.+.++.
T Consensus       156 ---------------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~  196 (262)
T PRK07984        156 ---------------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA  196 (262)
T ss_pred             ---------------------cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchH
Confidence                                 246999999999999888775   48999999999998864

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5.4e-19  Score=145.59  Aligned_cols=168  Identities=15%  Similarity=0.102  Sum_probs=125.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++++++||||+|+||+++++.|+++|++|++++|+.        ++.+.+. ++.. .+.++..+.+|+++++++.++++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDA--------DALEALAADLRAAHGVDVAVHALDLSSPEAREQLAA   77 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            568999999999999999999999999999999986        3333321 1111 13467889999999999888876


Q ss_pred             ---CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ---GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                         .+|++|||||....     ...+.++..+.+|+.+...+++.+.    +.+ .+++|++||.....+..        
T Consensus        78 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~~--------  148 (259)
T PRK06125         78 EAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPDA--------  148 (259)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCCC--------
Confidence               48999999997532     1112234788999999888777664    333 46899999865421110        


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                    ....|+.+|.+.+.+.+.++.+   .|++++.|+||.+.+|.
T Consensus       149 --------------~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  190 (259)
T PRK06125        149 --------------DYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR  190 (259)
T ss_pred             --------------CchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHH
Confidence                          1246899999998888887654   48999999999998874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=3.8e-19  Score=147.65  Aligned_cols=169  Identities=12%  Similarity=0.021  Sum_probs=123.7

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+  +.||.+++++|+++|++|++..|+.     ...++.+.+.+..   .....+.+|++|+++++++++
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-----~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~   80 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-----ALKKRVEPLAAEL---GAFVAGHCDVTDEASIDAVFE   80 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-----HHHHHHHHHHHhc---CCceEEecCCCCHHHHHHHHH
Confidence            35789999997  8999999999999999999887753     1112233332211   134578999999998888765


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             .+|++|||||....         ...+.++..+++|+.++.++++.+.+. ...+++|++||.....+.+   
T Consensus        81 ~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p---  157 (272)
T PRK08159         81 TLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMP---  157 (272)
T ss_pred             HHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCC---
Confidence                   47999999997531         112234588999999999999887653 1136999999865421110   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                         ....|+.||.+.+.+.+.++.+   +++++++|.||.+.++.
T Consensus       158 -------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  199 (272)
T PRK08159        158 -------------------HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLA  199 (272)
T ss_pred             -------------------cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHH
Confidence                               1246999999998888887765   37999999999998864

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.5e-19  Score=143.01  Aligned_cols=158  Identities=15%  Similarity=0.099  Sum_probs=121.7

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc----C
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----G   82 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~   82 (249)
                      +++||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..    +++.+++|+++++++.++++    .
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~--------~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~   69 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARR--------DDLEVAAKEL----DVDAIVCDNTDPASLEEARGLFPHH   69 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhc----cCcEEecCCCCHHHHHHHHHHHhhc
Confidence            699999999999999999999999999999986        4444332211    35678999999999888875    5


Q ss_pred             CCEEEEccccCC----C------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCCC
Q 025660           83 CTGVLHVATPVD----F------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        83 ~d~vih~a~~~~----~------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                      +|++|||||...    .      ...+.++..+++|+.++.++++++.+. ...++||++||..   . +          
T Consensus        70 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~---~-~----------  135 (223)
T PRK05884         70 LDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN---P-P----------  135 (223)
T ss_pred             CcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC---C-C----------
Confidence            899999998421    0      011234588999999999999988653 1146999999854   1 0          


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                  +...|+.||++.+.+.+.++.+   +|++++.|.||.+.++.
T Consensus       136 ------------~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~  177 (223)
T PRK05884        136 ------------AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG  177 (223)
T ss_pred             ------------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh
Confidence                        1246999999999888887765   47999999999997764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=4.4e-19  Score=146.31  Aligned_cols=169  Identities=14%  Similarity=0.006  Sum_probs=122.1

Q ss_pred             CCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+++||||++  +||++++++|+++|++|++.+|+.     ...+..+.+....  + ....+.+|++|+++++++++
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-----~~~~~~~~l~~~~--g-~~~~~~~Dv~~~~~v~~~~~   78 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-----VLEKRVKPLAEEI--G-CNFVSELDVTNPKSISNLFD   78 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-----HHHHHHHHHHHhc--C-CceEEEccCCCHHHHHHHHH
Confidence            357899999997  899999999999999999888764     0112222232111  1 22467899999998888875


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             ++|++||+||....         ...+.++..+++|+.+...+++.+.+. ...++||++||.....+.+   
T Consensus        79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~---  155 (260)
T PRK06603         79 DIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP---  155 (260)
T ss_pred             HHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC---
Confidence                   47999999986421         111233478999999999988876532 1136999999966432111   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                         ....|+.||.+.+.+.+.++.+   +|++++.|.||.+.++.
T Consensus       156 -------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  197 (260)
T PRK06603        156 -------------------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLA  197 (260)
T ss_pred             -------------------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchh
Confidence                               1246999999998888887765   47999999999998875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=5.9e-19  Score=145.56  Aligned_cols=169  Identities=15%  Similarity=0.071  Sum_probs=122.4

Q ss_pred             CCeEEEecc--chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++|||||  ++.||.+++++|+++|++|++.+|..     +..+..+.+....   .....+.+|++|++++.++++ 
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~   77 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-----RFKDRITEFAAEF---GSDLVFPCDVASDEQIDALFAS   77 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-----HHHHHHHHHHHhc---CCcceeeccCCCHHHHHHHHHH
Confidence            478999996  67999999999999999999886643     1113333332211   123468899999999888875 


Q ss_pred             ------CCCEEEEccccCCC----------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDF----------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~----------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                            .+|++|||||....          ...+.++..+++|+.++..+.+++.+. ...+++|++||..+..+.+   
T Consensus        78 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~---  154 (260)
T PRK06997         78 LGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVP---  154 (260)
T ss_pred             HHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCC---
Confidence                  47999999997532          111233477899999998888877653 1146899999976432111   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                         ....|+.||.+.+.+.+.++.+   +|++++.|.||.+.++..
T Consensus       155 -------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~  197 (260)
T PRK06997        155 -------------------NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAA  197 (260)
T ss_pred             -------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchh
Confidence                               1346999999998888887765   479999999999988643

>PRK05599 hypothetical protein; Provisional

Probab=99.82  E-value=1.1e-18  Score=142.81  Aligned_cols=167  Identities=17%  Similarity=0.150  Sum_probs=120.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCC-CCeEEEEcCCCChhhHHHHHc--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGAS-ERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      |+++||||+++||++++++|. +|++|++++|+.        ++.+.+ .++...+ ..+..+.+|++|+++++++++  
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   71 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRP--------EAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQT   71 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCH--------HHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHH
Confidence            479999999999999999998 599999999987        444333 2222222 247789999999998887765  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++|||||.....     ..+.....+.+|+.+...+++    .+.+.+..++||++||..+..+.+.     
T Consensus        72 ~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~-----  146 (246)
T PRK05599         72 QELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA-----  146 (246)
T ss_pred             HHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC-----
Confidence                 479999999975431     111122556778877765544    4444321479999999765432211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       ...|+.||.+.+.+.+.++.+   .+++++.+.||.+.++..
T Consensus       147 -----------------~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~  188 (246)
T PRK05599        147 -----------------NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT  188 (246)
T ss_pred             -----------------CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh
Confidence                             346999999998888887765   479999999999988753

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.3e-18  Score=140.66  Aligned_cols=169  Identities=9%  Similarity=0.043  Sum_probs=122.1

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+.++++++||||++.||++++++|.++|++|++++|+.        ++.+.+ +++...+.++..+.+|++++++++++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~--------~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~   72 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQ--------SALKDTYEQCSALTDNVYSFQLKDFSQESIRHL   72 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHH
Confidence            666778999999999999999999999999999999987        443332 22222234577889999999988877


Q ss_pred             Hc--------CCCEEEEccccCCC----C--CCChHHHhhhhHHhHHHHHHHH----HHhcCCcceEEEEcccceeeccC
Q 025660           80 IA--------GCTGVLHVATPVDF----E--DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        80 ~~--------~~d~vih~a~~~~~----~--~~~~~~~~~~~n~~~t~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~  141 (249)
                      ++        .+|++|||||....    .  ..+.+...+.+|+.++..+++.    +.+.+..++||++||....   .
T Consensus        73 ~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~  149 (227)
T PRK08862         73 FDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---Q  149 (227)
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---C
Confidence            54        58999999974322    1  1122235667787776665544    4333224699999985421   1


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                      .                      ...|+.||...+.+.+.++.+   ++++++.|.||.+.++.
T Consensus       150 ~----------------------~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        150 D----------------------LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             C----------------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            0                      235999999988888877665   48999999999988873

>PRK06484 short chain dehydrogenase; Validated

Probab=99.81  E-value=6e-19  Score=159.14  Aligned_cols=171  Identities=18%  Similarity=0.163  Sum_probs=130.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+.+++++|||||+++||.+++++|.++|++|++++|+.        +..+.+....  +.+...+.+|+++++++.+++
T Consensus         1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   70 (520)
T PRK06484          1 SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNV--------ERARERADSL--GPDHHALAMDVSDEAQIREGF   70 (520)
T ss_pred             CCCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--CCceeEEEeccCCHHHHHHHH
Confidence            556778999999999999999999999999999999987        4444332211  235678999999999888877


Q ss_pred             c-------CCCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCC
Q 025660           81 A-------GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~  142 (249)
                      +       ++|++|||||....       ...+.++..+++|+.++..+++++.+.    +..++||++||..+..+.+.
T Consensus        71 ~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~  150 (520)
T PRK06484         71 EQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK  150 (520)
T ss_pred             HHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC
Confidence            5       48999999997321       112233588999999999888877643    31239999999776433221


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                            ...|+.+|...+.+.+.++.+   .+++++.|+||.+.++..
T Consensus       151 ----------------------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~  192 (520)
T PRK06484        151 ----------------------RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMV  192 (520)
T ss_pred             ----------------------CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhh
Confidence                                  346999999999988887766   379999999999988764

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.6e-18  Score=137.22  Aligned_cols=150  Identities=20%  Similarity=0.173  Sum_probs=117.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---C
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---G   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~   82 (249)
                      |+++||||+|+||++++++|.++ ++|++++|+.        .                .+.+|++++++++++++   +
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~--------~----------------~~~~D~~~~~~~~~~~~~~~~   55 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSS--------G----------------DVQVDITDPASIRALFEKVGK   55 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC--------C----------------ceEecCCChHHHHHHHHhcCC
Confidence            37999999999999999999999 9999999876        1                36899999999988887   5


Q ss_pred             CCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCCCCCchh
Q 025660           83 CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (249)
Q Consensus        83 ~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (249)
                      +|+|||+||....     ...+.++..+++|+.++.++++.+.+. ...++|+++||..+..+.+               
T Consensus        56 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~---------------  120 (199)
T PRK07578         56 VDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP---------------  120 (199)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC---------------
Confidence            8999999997543     111223477899999999999988653 1146899999876432221               


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHH--cCCcEEEeecCeEeCCC
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~vrp~~v~g~~  202 (249)
                             ....|+.+|...+.+.+.++.+  .+++++.|+||.+-++.
T Consensus       121 -------~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~  161 (199)
T PRK07578        121 -------GGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESL  161 (199)
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCch
Confidence                   1346999999999888887775  48999999999886653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.81  E-value=2.1e-18  Score=146.03  Aligned_cols=191  Identities=17%  Similarity=0.104  Sum_probs=126.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      |+++++||||+++||.+++++|+++| ++|++++|+.        ++.+.+ .++......+..+.+|+++.+++.++++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   73 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDF--------LKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQ   73 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHH
Confidence            45789999999999999999999999 9999999986        333322 2222223467789999999998877764


Q ss_pred             -------CCCEEEEccccCCCC------CCChHHHhhhhHHhHHHHHHHHHHh----cC-CcceEEEEcccceeeccCCC
Q 025660           82 -------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLK----SG-TVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~t~~l~~~~~~----~~-~~~~~v~~SS~~~~~~~~~~  143 (249)
                             ++|++|||||.....      ..+.++..+++|+.++..+++.+.+    .+ ..++||++||..++......
T Consensus        74 ~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~  153 (314)
T TIGR01289        74 QFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAG  153 (314)
T ss_pred             HHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCC
Confidence                   489999999974321      1123457899999998777665543    32 13699999998764321110


Q ss_pred             --ccccCCCC-------CCch-hH-hhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeecCeEe-CCC
Q 025660          144 --VDMMDETF-------WSDV-DY-IRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVV-GPF  202 (249)
Q Consensus       144 --~~~~~e~~-------~~~~-~~-~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~v~-g~~  202 (249)
                        ..+.+..+       +... .. ......+...|+.||.+...+.+.++.+    .+++++.|+||.|. ++.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l  228 (314)
T TIGR01289       154 NVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGL  228 (314)
T ss_pred             cCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcc
Confidence              00000000       0000 00 0000123457999999987777777654    37999999999995 544

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.81  E-value=1.4e-18  Score=143.75  Aligned_cols=168  Identities=18%  Similarity=0.133  Sum_probs=118.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC-CCCCeEEEEcCCCChhhH----HHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGF----DAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~Dl~~~~~~----~~~   79 (249)
                      ++++||||+|+||++++++|+++|++|+++.|+..       +....+ .++.. .+.+...+.+|++|.+++    .++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~   74 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSA-------AAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAI   74 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcH-------HHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHH
Confidence            57999999999999999999999999999876531       222222 22211 123566789999998754    333


Q ss_pred             Hc-------CCCEEEEccccCCC------CCCC----------hHHHhhhhHHhHHHHHHHHHHhcC---------Ccce
Q 025660           80 IA-------GCTGVLHVATPVDF------EDKE----------PEEVITQRAINGTLGILKSCLKSG---------TVKR  127 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~----------~~~~~~~~n~~~t~~l~~~~~~~~---------~~~~  127 (249)
                      ++       .+|+||||||....      ...+          .+...+++|+.++..+++.+.+..         ...+
T Consensus        75 ~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~  154 (267)
T TIGR02685        75 IDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLS  154 (267)
T ss_pred             HHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeE
Confidence            32       58999999996432      1111          134779999999999888764321         1246


Q ss_pred             EEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       128 ~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                      ++++||.....+.                      .+...|+.||.+.+.+.+.++.+   +|++++.|+||.+.+|.
T Consensus       155 iv~~~s~~~~~~~----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~  210 (267)
T TIGR02685       155 IVNLCDAMTDQPL----------------------LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD  210 (267)
T ss_pred             EEEehhhhccCCC----------------------cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc
Confidence            8888876532111                      12357999999999999988776   58999999999987764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.81  E-value=7.1e-19  Score=144.69  Aligned_cols=166  Identities=17%  Similarity=0.151  Sum_probs=122.3

Q ss_pred             eEEEeccchhhHHHHHHHHHH----CCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHH
Q 025660            7 RVCVTGGTGFIASWLIMRLLD----HGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      .++||||+++||.+++++|++    +|++|++++|+.        +..+.+ .++..  .+.++.++.+|+++++++.++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~   73 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARND--------EALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQL   73 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCH--------HHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHH
Confidence            589999999999999999997    799999999986        333332 12211  233678899999999988877


Q ss_pred             HcC-----------CCEEEEccccCCC-----C---CCChHHHhhhhHHhHHHHHHHHHHhc-----CCcceEEEEcccc
Q 025660           80 IAG-----------CTGVLHVATPVDF-----E---DKEPEEVITQRAINGTLGILKSCLKS-----GTVKRVVYTSSNA  135 (249)
Q Consensus        80 ~~~-----------~d~vih~a~~~~~-----~---~~~~~~~~~~~n~~~t~~l~~~~~~~-----~~~~~~v~~SS~~  135 (249)
                      ++.           .|+||||||....     .   ..+.++..+++|+.++..+.+.+.+.     +..++||++||..
T Consensus        74 ~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~  153 (256)
T TIGR01500        74 LKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLC  153 (256)
T ss_pred             HHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHH
Confidence            652           1589999996432     1   11233578999999988777666432     1135899999976


Q ss_pred             eeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          136 AVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       136 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                      .+.+.+                      ....|+.||.+.+.+.+.++.+   ++++++++.||.+-++.
T Consensus       154 ~~~~~~----------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~  201 (256)
T TIGR01500       154 AIQPFK----------------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM  201 (256)
T ss_pred             hCCCCC----------------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH
Confidence            543221                      1346999999999999888766   47999999999998875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.80  E-value=2e-18  Score=133.27  Aligned_cols=167  Identities=21%  Similarity=0.225  Sum_probs=122.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      ++++||||+|+||.+++++|.++|. .|+++.|++..    .......+.++...+.++.++.+|+++++++.++++   
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPD----APGAAELLAELEALGAEVTVVACDVADRAALAAALAAIP   76 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCC----CccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4799999999999999999999986 68888887521    111110011111223467789999999988887765   


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCC
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (249)
                          .+|.|||+|+.....     ..+..+.+++.|+.++.++++.+.+.+ .+++|++||....++...          
T Consensus        77 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~~~----------  145 (180)
T smart00822       77 ARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGNPG----------  145 (180)
T ss_pred             HHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCCCC----------
Confidence                369999999965431     112234789999999999999998776 789999999765433211          


Q ss_pred             CchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeC
Q 025660          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVG  200 (249)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g  200 (249)
                                  ...|+.+|...+.+++.+.. .+++++.+.||.+.|
T Consensus       146 ------------~~~y~~sk~~~~~~~~~~~~-~~~~~~~~~~g~~~~  180 (180)
T smart00822      146 ------------QANYAAANAFLDALAAHRRA-RGLPATSINWGAWAD  180 (180)
T ss_pred             ------------chhhHHHHHHHHHHHHHHHh-cCCceEEEeeccccC
Confidence                        34699999999999966554 789999999987643

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.79  E-value=1.8e-17  Score=136.68  Aligned_cols=171  Identities=21%  Similarity=0.218  Sum_probs=128.2

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      ..+|++|||||+.+||+++|++|.+.|.+|++.+|+.        ++.+.    +........++..+.+|+++.++.++
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   77 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSE--------ERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEK   77 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHH
Confidence            4678999999999999999999999999999999987        33222    22222224568899999999887777


Q ss_pred             HHc--------CCCEEEEccccCCC------CCCChHHHhhhhHHhH-HHHHHHHHHh---cCCcceEEEEcccceeecc
Q 025660           79 AIA--------GCTGVLHVATPVDF------EDKEPEEVITQRAING-TLGILKSCLK---SGTVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        79 ~~~--------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~-t~~l~~~~~~---~~~~~~~v~~SS~~~~~~~  140 (249)
                      +++        ++|++||+||....      ...+.++..+++|+.| ...+.+.+..   ...-+.++++||...+...
T Consensus        78 l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~  157 (270)
T KOG0725|consen   78 LVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG  157 (270)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC
Confidence            654        48999999997653      2233445899999995 5555555543   2225689999997654332


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                      ..                     +...|+.+|.+.+++.+.++.+   +|+++++|-||.|.++.
T Consensus       158 ~~---------------------~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  158 PG---------------------SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             CC---------------------CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            11                     1146999999999998887766   48999999999999997

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=7.9e-18  Score=138.54  Aligned_cols=169  Identities=15%  Similarity=0.057  Sum_probs=121.3

Q ss_pred             CCCeEEEecc--chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++++++||||  ++.||.+++++|+++|++|++++|+..      .+..+.+....  ..++..+.+|++|++++.++++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~------~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA------LRLTERIAKRL--PEPAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc------hhHHHHHHHhc--CCCCcEEeCCCCCHHHHHHHHH
Confidence            4578999999  899999999999999999999987641      12223332211  1246789999999998888765


Q ss_pred             -------CCCEEEEccccCCC-------CC--CChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF-------ED--KEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-------~~--~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             ++|++|||||....       ..  .+.++..+++|+.++..+++.+.+. ...+++|++|+.... ..    
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~-~~----  152 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV-AW----  152 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc-cC----
Confidence                   48999999997531       11  1223367899999988888877643 113689988764211 00    


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                             +           ....|+.||...+.+.+.++.+   +|++++.|.||.+.++..
T Consensus       153 -------~-----------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~  196 (256)
T PRK07889        153 -------P-----------AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAA  196 (256)
T ss_pred             -------C-----------ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhh
Confidence                   0           1235999999888888877665   489999999999998753

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.79  E-value=1.5e-18  Score=133.46  Aligned_cols=151  Identities=25%  Similarity=0.239  Sum_probs=117.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      |+++||||+|.||.+++++|+++| +.|+++.|++      ..+..+.+ .++...+.++.++++|++++++++++++  
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~------~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSE------DSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEV   74 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSC------HHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecc------ccccccccccccccccccccccccccccccccccccccc
Confidence            589999999999999999999995 5788888881      00233322 3333334688999999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                           .+|++|||||....     ...+.++.++.+|+.+...+.+++.+.+ .++||++||..+..+.+.         
T Consensus        75 ~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~---------  144 (167)
T PF00106_consen   75 IKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRGSPG---------  144 (167)
T ss_dssp             HHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSSSTT---------
T ss_pred             ccccccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccCCCC---------
Confidence                 47999999998664     1123345889999999999999998855 789999999876543322         


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE  185 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  185 (249)
                                   ...|+.+|.+.+.+.+.++.+
T Consensus       145 -------------~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  145 -------------MSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             -------------BHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------ChhHHHHHHHHHHHHHHHHHh
Confidence                         457999999999999988765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.7e-18  Score=141.60  Aligned_cols=179  Identities=18%  Similarity=0.118  Sum_probs=122.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCccc--CCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH--RNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|+++||||+++||++++++|++.|++|++++|+..+...  ...++.+.+ +.+...+.++.++.+|+++++++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            35799999999999999999999999999999997411000  000122211 112222345778999999999888776


Q ss_pred             c-------CCCEEEEcc-ccC------CC---CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeec
Q 025660           81 A-------GCTGVLHVA-TPV------DF---EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFY  139 (249)
Q Consensus        81 ~-------~~d~vih~a-~~~------~~---~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~  139 (249)
                      +       ++|++|||| |..      ..   ...+.+...+++|+.++..+++.+.+    .+ .++||++||......
T Consensus        87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~~~  165 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAEYN  165 (305)
T ss_pred             HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCcccccc
Confidence            5       479999999 642      11   11122336788899888777766643    33 469999999653211


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                      ....                   .....|+.||.+...+.+.++.+   .|++++.|.||.+.++.
T Consensus       166 ~~~~-------------------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~  212 (305)
T PRK08303        166 ATHY-------------------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM  212 (305)
T ss_pred             CcCC-------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH
Confidence            1000                   01246999999888888877665   37999999999998774

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.6e-17  Score=135.79  Aligned_cols=165  Identities=15%  Similarity=0.101  Sum_probs=114.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++++||||+|+||++++++|+++|++|++++|+..       +......   ..  ....+.+|+++.+++.+.+.++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~-------~~~~~~~---~~--~~~~~~~D~~~~~~~~~~~~~i   80 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKI-------NNSESND---ES--PNEWIKWECGKEESLDKQLASL   80 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCch-------hhhhhhc---cC--CCeEEEeeCCCHHHHHHhcCCC
Confidence            4578999999999999999999999999999998751       1111111   11  1256889999999999989899


Q ss_pred             CEEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhc------CCcceEEEEcccceeeccCCCccccCCCCCCch
Q 025660           84 TGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKS------GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (249)
Q Consensus        84 d~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (249)
                      |++|||||.....  ..+.++..+++|+.++.++++.+.+.      ...+.++..||.....+.               
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~---------------  145 (245)
T PRK12367         81 DVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA---------------  145 (245)
T ss_pred             CEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC---------------
Confidence            9999999975431  12233488999999999999877542      111234444553322110               


Q ss_pred             hHhhhcCCCCchHHHHHHHHHHHH---HHHHH---HcCCcEEEeecCeEeCCCC
Q 025660          156 DYIRKLDSWGKSYAISKTLTERAA---LEFAE---EHGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~e~~~---~~~~~---~~~~~~~~vrp~~v~g~~~  203 (249)
                              ....|+.||.+.+.+.   .+++.   ..++.+..+.||.+.++..
T Consensus       146 --------~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~  191 (245)
T PRK12367        146 --------LSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN  191 (245)
T ss_pred             --------CCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC
Confidence                    1245999999865432   23322   2489999999999876643

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.78  E-value=4.8e-17  Score=131.95  Aligned_cols=163  Identities=13%  Similarity=0.090  Sum_probs=116.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      |+++||||+|+||++++++|+++|  +.|+...|+..        .     ..  ...++.++++|+++++++.++.+  
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~--------~-----~~--~~~~~~~~~~Dls~~~~~~~~~~~~   65 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHK--------P-----DF--QHDNVQWHALDVTDEAEIKQLSEQF   65 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCc--------c-----cc--ccCceEEEEecCCCHHHHHHHHHhc
Confidence            479999999999999999999986  56666566541        1     01  12367889999999998777654  


Q ss_pred             -CCCEEEEccccCCCC-----------CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 -GCTGVLHVATPVDFE-----------DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -~~d~vih~a~~~~~~-----------~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                       ++|+||||||.....           ..+.++..+.+|+.++..+++.+.+    .+ .++++++||......  ..  
T Consensus        66 ~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~--~~--  140 (235)
T PRK09009         66 TQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSIS--DN--  140 (235)
T ss_pred             CCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccc--cC--
Confidence             689999999976320           1122346789999888877776654    33 468999988432111  00  


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~~  203 (249)
                      +    .           .+...|+.+|...+.+.+.++.+     .+++++.|.||.+.++..
T Consensus       141 ~----~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~  188 (235)
T PRK09009        141 R----L-----------GGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALS  188 (235)
T ss_pred             C----C-----------CCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCC
Confidence            0    0           01346999999999998888755     379999999999998864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=1.2e-17  Score=148.20  Aligned_cols=168  Identities=20%  Similarity=0.150  Sum_probs=125.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|.++|++|++++|..      ..+....+....    +...+.+|+++++++.++++  
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~------~~~~l~~~~~~~----~~~~~~~Dv~~~~~~~~~~~~~  278 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA------AGEALAAVANRV----GGTALALDITAPDAPARIAEHL  278 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc------cHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999998854      112222222111    23578899999998887765  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC---CcceEEEEcccceeeccCCCccccC
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                           .+|+|||+||....     ...+.++..+.+|+.++.++.+.+.+..   ..++||++||...+.+...      
T Consensus       279 ~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~------  352 (450)
T PRK08261        279 AERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG------  352 (450)
T ss_pred             HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC------
Confidence                 47999999997643     1123334789999999999999987632   1379999999876433221      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                      ...|+.+|...+.+.+.++.+   .+++++.+.||.+.++..
T Consensus       353 ----------------~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~  394 (450)
T PRK08261        353 ----------------QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMT  394 (450)
T ss_pred             ----------------ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhh
Confidence                            346999999877777776554   489999999999877543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=2.1e-17  Score=126.47  Aligned_cols=168  Identities=17%  Similarity=0.190  Sum_probs=127.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+..+.+||||||+.+||.+|+++|++.|-+|++..|+.        ++++.....   ...+....||+.|.++..+++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e--------~~L~e~~~~---~p~~~t~v~Dv~d~~~~~~lv   69 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNE--------ERLAEAKAE---NPEIHTEVCDVADRDSRRELV   69 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcH--------HHHHHHHhc---CcchheeeecccchhhHHHHH
Confidence            778889999999999999999999999999999999998        555544332   236788999999999888777


Q ss_pred             c-------CCCEEEEccccCCC---C-CC---ChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCC
Q 025660           81 A-------GCTGVLHVATPVDF---E-DK---EPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~---~-~~---~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      +       ..+++|||||+...   . .+   +..+..+.+|+.++.+|...+.+.   ++...+|.+||..++.+-.. 
T Consensus        70 ewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~-  148 (245)
T COG3967          70 EWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAS-  148 (245)
T ss_pred             HHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccc-
Confidence            6       46999999997543   1 11   112367889999888877776543   22568999999876433211 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGP  201 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~  201 (249)
                             .              -.|+.+|++.-.+-..++.+   .++.+.=+-|+.|-.+
T Consensus       149 -------~--------------PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         149 -------T--------------PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -------c--------------ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                   1              14999999777666555443   3799999999999986

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.76  E-value=6.2e-17  Score=140.24  Aligned_cols=165  Identities=13%  Similarity=0.110  Sum_probs=114.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|+++||||+|+||++++++|.++|++|++++|++        ++......  .....+..+.+|++|++++.+.+.++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~--------~~l~~~~~--~~~~~v~~v~~Dvsd~~~v~~~l~~I  246 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS--------DKITLEIN--GEDLPVKTLHWQVGQEAALAELLEKV  246 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHh--hcCCCeEEEEeeCCCHHHHHHHhCCC
Confidence            568999999999999999999999999999999876        33221111  11124667899999999999999999


Q ss_pred             CEEEEccccCCCCCC--ChHHHhhhhHHhHHHHHHHHHHhc----CC---cceEEEEcccceeeccCCCccccCCCCCCc
Q 025660           84 TGVLHVATPVDFEDK--EPEEVITQRAINGTLGILKSCLKS----GT---VKRVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (249)
Q Consensus        84 d~vih~a~~~~~~~~--~~~~~~~~~n~~~t~~l~~~~~~~----~~---~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (249)
                      |++|||||.......  +..+..+++|+.++.++++++.+.    +.   ...+|++|++. . .. .            
T Consensus       247 DiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~-~~-~------------  311 (406)
T PRK07424        247 DILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V-NP-A------------  311 (406)
T ss_pred             CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c-cC-C------------
Confidence            999999997543111  223478999999999998887542    20   12345555422 1 10 0            


Q ss_pred             hhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                               ....|+.||.+.+.+......+.++.+..+.||.+.++.
T Consensus       312 ---------~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~  350 (406)
T PRK07424        312 ---------FSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL  350 (406)
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC
Confidence                     123599999998887543333346667777777665544

>PLN00015 protochlorophyllide reductase

Probab=99.76  E-value=3.9e-17  Score=137.97  Aligned_cols=186  Identities=16%  Similarity=0.098  Sum_probs=120.2

Q ss_pred             EEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-----
Q 025660            9 CVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-----   81 (249)
Q Consensus         9 lItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   81 (249)
                      +||||+++||.+++++|+++| ++|++.+|+.        ++...+ .++.....++.++.+|+++.+++.++++     
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   72 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDF--------LKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRS   72 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhc
Confidence            699999999999999999999 9999999876        333322 2222223467889999999998877765     


Q ss_pred             --CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cCC-cceEEEEcccceeeccC-CCccc-
Q 025660           82 --GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGT-VKRVVYTSSNAAVFYND-KDVDM-  146 (249)
Q Consensus        82 --~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~-~~~~v~~SS~~~~~~~~-~~~~~-  146 (249)
                        .+|++|||||....      ...+.++..+++|+.++..+++.+.+    .+. .++||++||..++.... ....+ 
T Consensus        73 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  152 (308)
T PLN00015         73 GRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPK  152 (308)
T ss_pred             CCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCc
Confidence              47999999997432      11223458899999997777665543    221 36999999986532110 00000 


Q ss_pred             cCCCC----------CCchhHhh-hcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeecCeEe-CCC
Q 025660          147 MDETF----------WSDVDYIR-KLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVV-GPF  202 (249)
Q Consensus       147 ~~e~~----------~~~~~~~~-~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~v~-g~~  202 (249)
                      ...+.          +....+.. ....+...|+.||.+.+.+.+.++.+    .|+++++++||.|. ++.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~  224 (308)
T PLN00015        153 ANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGL  224 (308)
T ss_pred             cchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccc
Confidence            00000          00000000 00112457999999866666666554    37999999999995 444

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.75  E-value=9.2e-17  Score=134.57  Aligned_cols=185  Identities=21%  Similarity=0.133  Sum_probs=130.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      .+++++||||+++||.+++++|..+|.+|+...|+..    +..+..+.+.. ......+.++++|+.+.+++.++.+  
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~----~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~  108 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEE----RGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEF  108 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHH----HHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999971    11122222332 2344578889999999999888876  


Q ss_pred             -----CCCEEEEccccCCC---CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccCC
Q 025660           82 -----GCTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 -----~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                           ..|++|||||+...   ...|-.+..+.+|..|...|.+.+    +... ..|||++||... ...........|
T Consensus       109 ~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~-~~~~~~~~l~~~  186 (314)
T KOG1208|consen  109 KKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG-GGKIDLKDLSGE  186 (314)
T ss_pred             HhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc-cCccchhhccch
Confidence                 46999999998655   123445689999999877766655    4444 479999999764 111111111111


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~  203 (249)
                      ....   |     .....|+.||.+......++++..  |+.+..+.||.+.++..
T Consensus       187 ~~~~---~-----~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  187 KAKL---Y-----SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             hccC---c-----cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence            1100   0     011249999998877777776664  79999999999999844

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.75  E-value=8.9e-17  Score=134.79  Aligned_cols=173  Identities=11%  Similarity=0.036  Sum_probs=118.9

Q ss_pred             CCCCCeEEEecc--chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc---------c---CCCC--CCCeEE
Q 025660            2 EEGKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK---------N---LPGA--SERLRI   65 (249)
Q Consensus         2 ~~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~---------~---~~~~--~~~~~~   65 (249)
                      ..++|++|||||  +++||+++++.|.+.|++|++ .|+.        ++++.+.         +   ....  ......
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWV--------PALNIFETSLRRGKFDESRKLPDGSLMEITKV   76 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCc--------chhhHHHHhhhccccchhhhcccccccCcCee
Confidence            446789999999  799999999999999999988 6654        2211111         0   1100  011356


Q ss_pred             EEcCC--CChh------------------hHHHHHc-------CCCEEEEccccCC----C---CCCChHHHhhhhHHhH
Q 025660           66 FHADL--SHPD------------------GFDAAIA-------GCTGVLHVATPVD----F---EDKEPEEVITQRAING  111 (249)
Q Consensus        66 ~~~Dl--~~~~------------------~~~~~~~-------~~d~vih~a~~~~----~---~~~~~~~~~~~~n~~~  111 (249)
                      +.+|+  ++++                  ++.++++       .+|++|||||...    .   ...+.++..+++|+.+
T Consensus        77 ~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~  156 (303)
T PLN02730         77 YPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYS  156 (303)
T ss_pred             eecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHH
Confidence            78888  3333                  5555554       4799999996421    1   1223345889999999


Q ss_pred             HHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----c
Q 025660          112 TLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----H  186 (249)
Q Consensus       112 t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~  186 (249)
                      +..+++.+.+. ...+++|++||..+....+.                     ....|+.||.+.+.+.+.++.+    +
T Consensus       157 ~~~l~~~~~p~m~~~G~II~isS~a~~~~~p~---------------------~~~~Y~asKaAl~~l~~~la~El~~~~  215 (303)
T PLN02730        157 FVSLLQHFGPIMNPGGASISLTYIASERIIPG---------------------YGGGMSSAKAALESDTRVLAFEAGRKY  215 (303)
T ss_pred             HHHHHHHHHHHHhcCCEEEEEechhhcCCCCC---------------------CchhhHHHHHHHHHHHHHHHHHhCcCC
Confidence            98888877653 11379999999765322211                     0125999999999888887765    3


Q ss_pred             CCcEEEeecCeEeCCCCC
Q 025660          187 GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       187 ~~~~~~vrp~~v~g~~~~  204 (249)
                      |++++.|.||.+.++...
T Consensus       216 gIrVn~V~PG~v~T~~~~  233 (303)
T PLN02730        216 KIRVNTISAGPLGSRAAK  233 (303)
T ss_pred             CeEEEEEeeCCccCchhh
Confidence            799999999999988643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.74  E-value=7.4e-17  Score=131.48  Aligned_cols=167  Identities=22%  Similarity=0.246  Sum_probs=125.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ..|.|+|||...+.|..|+++|.++|+.|.+-...+        +..+.|..... .++...+..|++++|+++++.+  
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~--------~gae~L~~~~~-s~rl~t~~LDVT~~esi~~a~~~V   98 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTE--------EGAESLRGETK-SPRLRTLQLDVTKPESVKEAAQWV   98 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecC--------chHHHHhhhhc-CCcceeEeeccCCHHHHHHHHHHH
Confidence            356799999999999999999999999999988665        34444433221 3467888999999999999876  


Q ss_pred             -------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             +.-.||||||+...      ..-+.++..+++|+.|+.++.+.+    +++  .+|+|++||..+--..+.  
T Consensus        99 ~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~~GR~~~p~--  174 (322)
T KOG1610|consen   99 KKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSVLGRVALPA--  174 (322)
T ss_pred             HHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEecccccCccCcc--
Confidence                   24689999996543      111233588999999877766655    444  489999999875322211  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                          ..+|+.||.+.|.+...++.+   +|+++.++-||..-++..
T Consensus       175 --------------------~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~  216 (322)
T KOG1610|consen  175 --------------------LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA  216 (322)
T ss_pred             --------------------cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence                                457999999999888877665   699999999996555443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.73  E-value=5.3e-16  Score=116.87  Aligned_cols=193  Identities=16%  Similarity=0.186  Sum_probs=135.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+|.|+||||-+|++|+++..++||+|+++.|++        .+...+       ..+.+.+.|+.|++++++.+.+.|+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~--------~K~~~~-------~~~~i~q~Difd~~~~a~~l~g~Da   65 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNA--------SKLAAR-------QGVTILQKDIFDLTSLASDLAGHDA   65 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeCh--------Hhcccc-------ccceeecccccChhhhHhhhcCCce
Confidence            4799999999999999999999999999999998        443332       2567899999999999999999999


Q ss_pred             EEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCC
Q 025660           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (249)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (249)
                      ||..-+....   +..    .........|++.++..+ +.|++.++.+.-.+-.++.. .++-..+           |.
T Consensus        66 VIsA~~~~~~---~~~----~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~r-LvD~p~f-----------P~  125 (211)
T COG2910          66 VISAFGAGAS---DND----ELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTR-LVDTPDF-----------PA  125 (211)
T ss_pred             EEEeccCCCC---Chh----HHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCce-eecCCCC-----------ch
Confidence            9988776532   111    112334678888888888 89999999887666554422 1211111           34


Q ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhhh
Q 025660          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAF  245 (249)
Q Consensus       166 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~  245 (249)
                      ..|...+..+|.+ ..+..+.+++|+.+.|...|-|+...+.         ...|+..+...  ..--.+|...|.|-|+
T Consensus       126 ey~~~A~~~ae~L-~~Lr~~~~l~WTfvSPaa~f~PGerTg~---------yrlggD~ll~n--~~G~SrIS~aDYAiA~  193 (211)
T COG2910         126 EYKPEALAQAEFL-DSLRAEKSLDWTFVSPAAFFEPGERTGN---------YRLGGDQLLVN--AKGESRISYADYAIAV  193 (211)
T ss_pred             hHHHHHHHHHHHH-HHHhhccCcceEEeCcHHhcCCccccCc---------eEeccceEEEc--CCCceeeeHHHHHHHH
Confidence            4577777777754 4555556799999999999999765431         11233333221  2223456677777665

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.72  E-value=1e-16  Score=124.69  Aligned_cols=170  Identities=22%  Similarity=0.152  Sum_probs=123.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |.-.+|++++||+.|+||++++++|+++|..+.+++-+.+     +.+....|++..+ ..++.|+++|+++.+++++++
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~E-----n~~a~akL~ai~p-~~~v~F~~~DVt~~~~~~~~f   74 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEE-----NPEAIAKLQAINP-SVSVIFIKCDVTNRGDLEAAF   74 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhh-----CHHHHHHHhccCC-CceEEEEEeccccHHHHHHHH
Confidence            5556899999999999999999999999998877766551     2234444544433 246889999999998888887


Q ss_pred             c-------CCCEEEEccccCCCCCCChHHHhhhhHHh----HHHHHHHHHHhcC--CcceEEEEcccceeeccCCCcccc
Q 025660           81 A-------GCTGVLHVATPVDFEDKEPEEVITQRAIN----GTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~~~~~~~~~~~~n~~----~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                      +       .+|++||.||+...  .++ +.++.+|+.    +|...++.+.+.+  ..+-+|++||..++.+-+.     
T Consensus        75 ~ki~~~fg~iDIlINgAGi~~d--kd~-e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~-----  146 (261)
T KOG4169|consen   75 DKILATFGTIDILINGAGILDD--KDW-ERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPV-----  146 (261)
T ss_pred             HHHHHHhCceEEEEcccccccc--hhH-HHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcccc-----
Confidence            6       47999999999764  444 489999965    5677788876543  4568999999766443322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHH-----HHHHcCCcEEEeecCeEeCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALE-----FAEEHGLDLVTLIPSMVVGP  201 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~-----~~~~~~~~~~~vrp~~v~g~  201 (249)
                                       -..|++||...-.+-+.     +-+..|+++..+.||.+-..
T Consensus       147 -----------------~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~  188 (261)
T KOG4169|consen  147 -----------------FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD  188 (261)
T ss_pred             -----------------chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH
Confidence                             23599999843332222     22336999999999987543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.71  E-value=3.7e-16  Score=127.98  Aligned_cols=177  Identities=20%  Similarity=0.202  Sum_probs=125.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCC-CCeEEEEcCCCC-hhhHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS-ERLRIFHADLSH-PDGFDA   78 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~Dl~~-~~~~~~   78 (249)
                      |+.+++++|||||+++||.+++++|.++|+.|+++.|+....   ..+.......  ... ..+.+..+|+++ .+++..
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~   75 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE---AAEALAAAIK--EAGGGRAAAVAADVSDDEESVEA   75 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh---hHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHH
Confidence            456778999999999999999999999999998888876100   0011111111  111 256778899998 887776


Q ss_pred             HHc-------CCCEEEEccccCC----C--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCcc
Q 025660           79 AIA-------GCTGVLHVATPVD----F--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~----~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                      +++       .+|++|||||...    .  ...+.++..+.+|+.+...+.+.+.+.-..++||++||.... .....  
T Consensus        76 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~--  152 (251)
T COG1028          76 LVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG--  152 (251)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC--
Confidence            665       3899999999853    2  122344589999999988888855443211299999998764 32110  


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.++...
T Consensus       153 -------------------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~  195 (251)
T COG1028         153 -------------------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTA  195 (251)
T ss_pred             -------------------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchh
Confidence                               146999999888888877644   5899999999977766543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.71  E-value=1.3e-16  Score=129.52  Aligned_cols=187  Identities=21%  Similarity=0.232  Sum_probs=123.2

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCEEE
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVL   87 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   87 (249)
                      |+|+||||.+|+.+++.|++.+++|+++.|++      ..+..+.++..     .++++.+|+.|++++.++++++|.|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~------~~~~~~~l~~~-----g~~vv~~d~~~~~~l~~al~g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP------SSDRAQQLQAL-----GAEVVEADYDDPESLVAALKGVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS------HHHHHHHHHHT-----TTEEEES-TT-HHHHHHHHTTCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc------chhhhhhhhcc-----cceEeecccCCHHHHHHHHcCCceEE
Confidence            79999999999999999999999999999987      11234444443     46788999999999999999999999


Q ss_pred             EccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCch
Q 025660           88 HVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS  167 (249)
Q Consensus        88 h~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~  167 (249)
                      .+-+....           .-.....++++++++.+ +++||+.|....   .....    ...            |...
T Consensus        70 ~~~~~~~~-----------~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~---~~~~~----~~~------------p~~~  118 (233)
T PF05368_consen   70 SVTPPSHP-----------SELEQQKNLIDAAKAAG-VKHFVPSSFGAD---YDESS----GSE------------PEIP  118 (233)
T ss_dssp             EESSCSCC-----------CHHHHHHHHHHHHHHHT--SEEEESEESSG---TTTTT----TST------------THHH
T ss_pred             eecCcchh-----------hhhhhhhhHHHhhhccc-cceEEEEEeccc---ccccc----ccc------------ccch
Confidence            88875431           11555678999999999 999996443221   10100    000            1222


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-cc-cccccccccccc-hhhHHHhh
Q 025660          168 YAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KL-KICCVMNRSHTL-FVYAIAFA  244 (249)
Q Consensus       168 Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~i-~v~d~a~a  244 (249)
                      .-..|...|..+++    .+++++++|||..+.......      .......... .+ ....++....++ ..+|++++
T Consensus       119 ~~~~k~~ie~~l~~----~~i~~t~i~~g~f~e~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~  188 (233)
T PF05368_consen  119 HFDQKAEIEEYLRE----SGIPYTIIRPGFFMENLLPPF------APVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRA  188 (233)
T ss_dssp             HHHHHHHHHHHHHH----CTSEBEEEEE-EEHHHHHTTT------HHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHH
T ss_pred             hhhhhhhhhhhhhh----ccccceeccccchhhhhhhhh------cccccccccceEEEEccCCCccccccccHHHHHHH
Confidence            33467777766655    589999999998765432211      0001112221 23 335666566775 99999887


Q ss_pred             hh
Q 025660          245 FA  246 (249)
Q Consensus       245 ~~  246 (249)
                      ++
T Consensus       189 va  190 (233)
T PF05368_consen  189 VA  190 (233)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.70  E-value=9.7e-16  Score=119.21  Aligned_cols=174  Identities=16%  Similarity=0.133  Sum_probs=122.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcC-CCCcccCCchh-hhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRS-ELDPEHRNSKD-LSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~-~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+.|+||||+++||..|+++|++. |.++++..++ +        ++ ...++......+++++++.|+++.+++.++++
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~--------e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~   74 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDP--------EKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQ   74 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCCh--------HHhhHHHHHhhccCCceEEEEEecccHHHHHHHHH
Confidence            456999999999999999999987 6777666655 4        33 33333322245689999999999998888876


Q ss_pred             ---------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcC----------CcceEEEEc
Q 025660           82 ---------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSG----------TVKRVVYTS  132 (249)
Q Consensus        82 ---------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~----------~~~~~v~~S  132 (249)
                               ++|.+++|||....      .....+-..+++|..++..+.+.+    ++..          ....||++|
T Consensus        75 ~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinis  154 (249)
T KOG1611|consen   75 EVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINIS  154 (249)
T ss_pred             HHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEee
Confidence                     46999999998654      112223478899988766555544    3332          123799999


Q ss_pred             ccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       133 S~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                      |.++-.+...                   +.+...|..||.+...+.+.++-+   .++-++.+.||+|-+.+...
T Consensus       155 S~~~s~~~~~-------------------~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~  211 (249)
T KOG1611|consen  155 SSAGSIGGFR-------------------PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK  211 (249)
T ss_pred             ccccccCCCC-------------------CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC
Confidence            9765311101                   123568999999888777766544   36889999999999887543

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.69  E-value=3.5e-16  Score=122.26  Aligned_cols=214  Identities=13%  Similarity=0.051  Sum_probs=162.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCe-EEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~-V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +..+|||||+-|.+|..+++-|..+ |.+ |+..+...         ..+.+.      ..-.++..|+.|...+++++-
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~K---------Pp~~V~------~~GPyIy~DILD~K~L~eIVV  107 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVK---------PPANVT------DVGPYIYLDILDQKSLEEIVV  107 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccC---------Cchhhc------ccCCchhhhhhccccHHHhhc
Confidence            4579999999999999999988877 665 44444332         111111      123578899999999999985


Q ss_pred             --CCCEEEEccccCCC-CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           82 --GCTGVLHVATPVDF-EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        82 --~~d~vih~a~~~~~-~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                        ++|-+||..+..+. .+.+.. -...+|+.|..++++.+.+.+  -++..-|+++++++... ..|.++-+.      
T Consensus       108 n~RIdWL~HfSALLSAvGE~NVp-LA~~VNI~GvHNil~vAa~~k--L~iFVPSTIGAFGPtSP-RNPTPdltI------  177 (366)
T KOG2774|consen  108 NKRIDWLVHFSALLSAVGETNVP-LALQVNIRGVHNILQVAAKHK--LKVFVPSTIGAFGPTSP-RNPTPDLTI------  177 (366)
T ss_pred             ccccceeeeHHHHHHHhcccCCc-eeeeecchhhhHHHHHHHHcC--eeEeecccccccCCCCC-CCCCCCeee------
Confidence              59999999876544 222222 678999999999999999998  47777888887765432 333333332      


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHHHHHcCCCcccccccccccccc
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGNVKLKICCVMNRSHTL  236 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  236 (249)
                         -.|+..||.||..+|.+-.++...+|+++-++|.+.+......++  ....+..+..++..++...+...+...-++
T Consensus       178 ---QRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmm  254 (366)
T KOG2774|consen  178 ---QRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMM  254 (366)
T ss_pred             ---ecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCcee
Confidence               347899999999999999999888999999999888877644333  445677889999999988888889999999


Q ss_pred             hhhHHHhhh
Q 025660          237 FVYAIAFAF  245 (249)
Q Consensus       237 ~v~d~a~a~  245 (249)
                      |..|+-+++
T Consensus       255 y~~dc~~~~  263 (366)
T KOG2774|consen  255 YDTDCMASV  263 (366)
T ss_pred             ehHHHHHHH
Confidence            999987775

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.68  E-value=6.4e-16  Score=120.58  Aligned_cols=164  Identities=18%  Similarity=0.241  Sum_probs=117.7

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC---
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG---   82 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   82 (249)
                      ++||||++|.||..+++.|.+++. +|+++.|+..    ...+..+.+.++...+.++.++.+|++|++++.++++.   
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~----~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGA----PSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGG----GSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCC----ccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHh
Confidence            689999999999999999999985 8999999830    11122334444444456899999999999999999863   


Q ss_pred             ----CCEEEEccccCCC---C--CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCC
Q 025660           83 ----CTGVLHVATPVDF---E--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (249)
Q Consensus        83 ----~d~vih~a~~~~~---~--~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (249)
                          ++.|||+|+....   .  ..+..+..+..-+.++.+|.+.+.+.+ ...||.+||.....+..+           
T Consensus        78 ~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~g-----------  145 (181)
T PF08659_consen   78 RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGPG-----------  145 (181)
T ss_dssp             TSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-TT-----------
T ss_pred             ccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCcc-----------
Confidence                5899999998544   1  122234667778899999999998877 899999999987666544           


Q ss_pred             chhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeE
Q 025660          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMV  198 (249)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v  198 (249)
                                 ...|+......+.+.+.... .+.++..|.-|.+
T Consensus       146 -----------q~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~W  178 (181)
T PF08659_consen  146 -----------QSAYAAANAFLDALARQRRS-RGLPAVSINWGAW  178 (181)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-EB
T ss_pred             -----------hHhHHHHHHHHHHHHHHHHh-CCCCEEEEEcccc
Confidence                       45799999999999887654 6899988887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.68  E-value=4.8e-16  Score=119.71  Aligned_cols=168  Identities=18%  Similarity=0.151  Sum_probs=124.6

Q ss_pred             CCCeEEEeccc-hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGT-GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +.++|||||++ |+||.+|+++|.++|+.|++..|+.        +....|.-.    .++...+.|+++++++.+... 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~--------e~M~~L~~~----~gl~~~kLDV~~~~~V~~v~~e   73 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRL--------EPMAQLAIQ----FGLKPYKLDVSKPEEVVTVSGE   73 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcccc--------chHhhHHHh----hCCeeEEeccCChHHHHHHHHH
Confidence            45789999865 9999999999999999999999998        454444321    257899999999998877754 


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                             ..|.++|+||..=.     ......+..+++|+.|..++.++..+.  +..+.||+++|..++.+.+      
T Consensus        74 vr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp------  147 (289)
T KOG1209|consen   74 VRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP------  147 (289)
T ss_pred             HhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc------
Confidence                   36999999996321     122233578899998877766655432  1147999999988765542      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHH---HcCCcEEEeecCeEeCCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE---EHGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~vrp~~v~g~~~~~  205 (249)
                                      +.+.|.+||++.-.+.+-+.-   .+|++++.+.+|.|-+.-.+.
T Consensus       148 ----------------f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  148 ----------------FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             ----------------hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence                            256799999987776665432   269999999999997765443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.67  E-value=1.9e-15  Score=153.75  Aligned_cols=178  Identities=19%  Similarity=0.200  Sum_probs=133.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcc----cC---------------------------------
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPE----HR---------------------------------   45 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~----~~---------------------------------   45 (249)
                      +++++|||||+|+||.+++++|+++ |++|++++|+.....    ..                                 
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            3578999999999999999999998 699999999831000    00                                 


Q ss_pred             ---CchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc------CCCEEEEccccCCC-----CCCChHHHhhhhHHhH
Q 025660           46 ---NSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA------GCTGVLHVATPVDF-----EDKEPEEVITQRAING  111 (249)
Q Consensus        46 ---~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~  111 (249)
                         ..+..+.+..+...+.++.++.+|++|.+++.++++      .+|.|||+||....     ...+.++..+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence               000001122222334578899999999998888876      47999999997543     1223345899999999


Q ss_pred             HHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-CCcE
Q 025660          112 TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDL  190 (249)
Q Consensus       112 t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~  190 (249)
                      +.+|++++.... .++||++||..++++..+                      ...|+.+|...+.+.+.++.+. ++++
T Consensus      2156 ~~~Ll~al~~~~-~~~IV~~SSvag~~G~~g----------------------qs~YaaAkaaL~~la~~la~~~~~irV 2212 (2582)
T TIGR02813      2156 LLSLLAALNAEN-IKLLALFSSAAGFYGNTG----------------------QSDYAMSNDILNKAALQLKALNPSAKV 2212 (2582)
T ss_pred             HHHHHHHHHHhC-CCeEEEEechhhcCCCCC----------------------cHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence            999999998776 679999999887655433                      3469999998888888877765 6999


Q ss_pred             EEeecCeEeCCCCC
Q 025660          191 VTLIPSMVVGPFIC  204 (249)
Q Consensus       191 ~~vrp~~v~g~~~~  204 (249)
                      +.+.||.+-|++..
T Consensus      2213 ~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2213 MSFNWGPWDGGMVN 2226 (2582)
T ss_pred             EEEECCeecCCccc
Confidence            99999999887643

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.66  E-value=5.9e-15  Score=120.24  Aligned_cols=169  Identities=21%  Similarity=0.170  Sum_probs=128.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC---CCCeEEEEcCCCChhhHHHHHcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA---SERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+|+|||++..||.+++.++..+|++|+++.|+.        +++..+...-+.   ...+.+..+|+.|-+++...++.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~--------~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~  105 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSG--------KKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEE  105 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccH--------HHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhh
Confidence            4899999999999999999999999999999998        555544322222   22366889999999998888763


Q ss_pred             -------CCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccc
Q 025660           83 -------CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        83 -------~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                             +|.++||||..-.     ......+..+++|..|+.+++.++...    .+.++|+.+||..+..+-.+    
T Consensus       106 l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~G----  181 (331)
T KOG1210|consen  106 LRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYG----  181 (331)
T ss_pred             hhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccc----
Confidence                   6999999996533     122233588999999999988877543    22459999999887655433    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                        .+.|+.+|.+...+...+.++   ++++++..-|+.+-+|+..
T Consensus       182 ------------------ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE  224 (331)
T KOG1210|consen  182 ------------------YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFE  224 (331)
T ss_pred             ------------------ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccc
Confidence                              356888888776666665554   5899999999999999754

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.65  E-value=1.4e-14  Score=119.94  Aligned_cols=183  Identities=22%  Similarity=0.208  Sum_probs=130.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      ++||||||||++|++++++|+++|++|+++.|++        ++...+.      ..+++..+|+.+++.+...+++.|.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~--------~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~   66 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNP--------EAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDG   66 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCH--------HHHHhhc------CCcEEEEeccCCHhHHHHHhccccE
Confidence            4799999999999999999999999999999998        5555444      3689999999999999999999999


Q ss_pred             EEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCC
Q 025660           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (249)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (249)
                      ++++.+... ... .   ..........+..+.+. .+ .++++++|...+..   .                     ..
T Consensus        67 ~~~i~~~~~-~~~-~---~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~~~---~---------------------~~  115 (275)
T COG0702          67 VLLISGLLD-GSD-A---FRAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGADA---A---------------------SP  115 (275)
T ss_pred             EEEEecccc-ccc-c---hhHHHHHHHHHHHHHhc-CC-ceEEEEeccCCCCC---C---------------------Cc
Confidence            999998754 222 1   12222333344444444 33 67899998855311   1                     13


Q ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-cccccccccccccchhhHHHhh
Q 025660          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KLKICCVMNRSHTLFVYAIAFA  244 (249)
Q Consensus       166 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~d~a~a  244 (249)
                      ..|..+|..+|..+..    .+++.+++|+..+|......       ........+. ......+  ...++..+|++.+
T Consensus       116 ~~~~~~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~  182 (275)
T COG0702         116 SALARAKAAVEAALRS----SGIPYTTLRRAAFYLGAGAA-------FIEAAEAAGLPVIPRGIG--RLSPIAVDDVAEA  182 (275)
T ss_pred             cHHHHHHHHHHHHHHh----cCCCeEEEecCeeeeccchh-------HHHHHHhhCCceecCCCC--ceeeeEHHHHHHH
Confidence            4699999999999987    68999999977666654322       1222222232 2333333  7789999999887


Q ss_pred             hh
Q 025660          245 FA  246 (249)
Q Consensus       245 ~~  246 (249)
                      +.
T Consensus       183 ~~  184 (275)
T COG0702         183 LA  184 (275)
T ss_pred             HH
Confidence            64

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=3.3e-15  Score=125.24  Aligned_cols=179  Identities=8%  Similarity=-0.044  Sum_probs=110.8

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCC-CcccC--Cchhhhhh-ccC-------------CCCCCCeE
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSEL-DPEHR--NSKDLSFL-KNL-------------PGASERLR   64 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~--~~~~~~~l-~~~-------------~~~~~~~~   64 (249)
                      ++|+++||||+  .+||+++++.|.++|++|++.++.+. ....+  ...+.... ...             .......+
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~   86 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPE   86 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCE
Confidence            56899999995  89999999999999999998764310 00000  00000000 000             00000112


Q ss_pred             EEEcCCCC--------hhhHHHHHc-------CCCEEEEccccCC----C---CCCChHHHhhhhHHhHHHHHHHHHHhc
Q 025660           65 IFHADLSH--------PDGFDAAIA-------GCTGVLHVATPVD----F---EDKEPEEVITQRAINGTLGILKSCLKS  122 (249)
Q Consensus        65 ~~~~Dl~~--------~~~~~~~~~-------~~d~vih~a~~~~----~---~~~~~~~~~~~~n~~~t~~l~~~~~~~  122 (249)
                      -+.+|+++        .++++++++       ++|++|||||...    .   ...+.++..+++|+.++.++++++.+.
T Consensus        87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~  166 (299)
T PRK06300         87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI  166 (299)
T ss_pred             EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            22233322        123444443       4899999997532    1   112233488999999999988887653


Q ss_pred             -CCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeecCe
Q 025660          123 -GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSM  197 (249)
Q Consensus       123 -~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~  197 (249)
                       ...+++|++||.....+.+.                     ....|+.||...+.+.+.++.+    +|++++.|.||.
T Consensus       167 m~~~G~ii~iss~~~~~~~p~---------------------~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~  225 (299)
T PRK06300        167 MNPGGSTISLTYLASMRAVPG---------------------YGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGP  225 (299)
T ss_pred             hhcCCeEEEEeehhhcCcCCC---------------------ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence             11368999998664322211                     0125999999998888877765    379999999999


Q ss_pred             EeCCCC
Q 025660          198 VVGPFI  203 (249)
Q Consensus       198 v~g~~~  203 (249)
                      +.++..
T Consensus       226 v~T~~~  231 (299)
T PRK06300        226 LASRAG  231 (299)
T ss_pred             ccChhh
Confidence            988764

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.64  E-value=5.4e-16  Score=115.81  Aligned_cols=167  Identities=18%  Similarity=0.155  Sum_probs=128.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .++.|++||+.-+||+++++.|.+.|.+|+++.|.+        +.+..| .+-+   ..++.+.+|+.+-|.+.+++..
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~--------a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~   74 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNE--------ANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVP   74 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCH--------HHHHHHHhhCC---cceeeeEecccHHHHHHHhhcc
Confidence            467899999999999999999999999999999998        555544 3332   3588999999999998888864


Q ss_pred             ---CCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccCC
Q 025660           83 ---CTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        83 ---~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                         +|.++|+||..-.      ...++ +..+++|+.+..++.+..    ......+.||.+||.+...+-..       
T Consensus        75 v~pidgLVNNAgvA~~~pf~eiT~q~f-Dr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~n-------  146 (245)
T KOG1207|consen   75 VFPIDGLVNNAGVATNHPFGEITQQSF-DRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDN-------  146 (245)
T ss_pred             cCchhhhhccchhhhcchHHHHhHHhh-cceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCC-------
Confidence               6999999997532      22333 478899999887777763    33333568999999875332211       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                     .+.|+.+|.+.+.+.+.++-+.   .++++.+.|..|.+.+..
T Consensus       147 ---------------HtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~  189 (245)
T KOG1207|consen  147 ---------------HTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR  189 (245)
T ss_pred             ---------------ceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc
Confidence                           4579999998888877776654   599999999999887643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.64  E-value=5.8e-16  Score=126.23  Aligned_cols=160  Identities=19%  Similarity=0.171  Sum_probs=116.3

Q ss_pred             ccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhh-hhhccCCCCCCCeEEEEcCCCChhhHHHHHc-------
Q 025660           12 GGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA-------   81 (249)
Q Consensus        12 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   81 (249)
                      |++  +.||++++++|+++|++|++++|+.        ++. +.++++.... ...++.+|+++++++.++++       
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~--------~~~~~~~~~l~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNE--------EKLADALEELAKEY-GAEVIQCDLSDEESVEALFDEAVERFG   71 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSH--------HHHHHHHHHHHHHT-TSEEEESCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHHHHHc-CCceEeecCcchHHHHHHHHHHHhhcC
Confidence            566  9999999999999999999999997        331 2222221111 13469999999998888854       


Q ss_pred             -CCCEEEEccccCCC----C-----CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCC
Q 025660           82 -GCTGVLHVATPVDF----E-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 -~~d~vih~a~~~~~----~-----~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                       .+|++||+++....    .     ..+.++..+++|+.+...+++.+.+. +..+++|++||.....+.+         
T Consensus        72 g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~---------  142 (241)
T PF13561_consen   72 GRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMP---------  142 (241)
T ss_dssp             SSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBST---------
T ss_pred             CCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCc---------
Confidence             57999999987653    1     11233578899999988888887553 1136899999976432221         


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeecCeEeCCC
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~v~g~~  202 (249)
                                   ....|+.+|.+.+.+.+.++.+    +|+++++|.||.+.++.
T Consensus       143 -------------~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~  185 (241)
T PF13561_consen  143 -------------GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPM  185 (241)
T ss_dssp             -------------TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHH
T ss_pred             -------------cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccc
Confidence                         1347999999888888876554    47999999999888764

...

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.63  E-value=4.8e-15  Score=120.87  Aligned_cols=161  Identities=18%  Similarity=0.182  Sum_probs=113.2

Q ss_pred             HHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc----CCCEEEEccccCCCC
Q 025660           21 LIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----GCTGVLHVATPVDFE   96 (249)
Q Consensus        21 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vih~a~~~~~~   96 (249)
                      ++++|+++|++|++++|+.        ++..          ..+++++|+++.+++.++++    ++|+||||||.... 
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~--------~~~~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~-   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRRE--------PGMT----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT-   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCc--------chhh----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC-
Confidence            4789999999999999987        2211          12467899999999998887    48999999997532 


Q ss_pred             CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCC----CCCch--hHh-hhcCCCCchH
Q 025660           97 DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDET----FWSDV--DYI-RKLDSWGKSY  168 (249)
Q Consensus        97 ~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~----~~~~~--~~~-~~~~~~~~~Y  168 (249)
                       .+ .+..+++|+.++..+++.+.+. ...++||++||..++.....  .+..+.    ...+.  .+. .....+...|
T Consensus        62 -~~-~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  137 (241)
T PRK12428         62 -AP-VELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQR--LELHKALAATASFDEGAAWLAAHPVALATGY  137 (241)
T ss_pred             -CC-HHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccc--hHHHHhhhccchHHHHHHhhhccCCCcccHH
Confidence             33 3489999999999999998764 11379999999987642211  111110    00000  000 0011234689


Q ss_pred             HHHHHHHHHHHHHHH-H---HcCCcEEEeecCeEeCCCCC
Q 025660          169 AISKTLTERAALEFA-E---EHGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       169 ~~sK~~~e~~~~~~~-~---~~~~~~~~vrp~~v~g~~~~  204 (249)
                      +.||.+.+.+.+.++ .   .+|+++++|+||.+.++...
T Consensus       138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~  177 (241)
T PRK12428        138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILG  177 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccc
Confidence            999999998888777 3   35899999999999998643

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.59  E-value=1.3e-14  Score=118.30  Aligned_cols=170  Identities=17%  Similarity=0.149  Sum_probs=125.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCC-CCCCeEEEEcCCCChhh----HHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPG-ASERLRIFHADLSHPDG----FDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~-~~~~~~~~~~Dl~~~~~----~~~~   79 (249)
                      +=..|||||.+||++.+++|+++|.+|++++|+.        ++++.+.. +.+ ....+.++..|.++++.    +.+.
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~--------~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~  121 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQ--------EKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEK  121 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHH
Confidence            4579999999999999999999999999999998        77777643 222 22457789999988765    4444


Q ss_pred             HcC--CCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCccc
Q 025660           80 IAG--CTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        80 ~~~--~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      +.+  +.++|||+|....       .++......+.+|+.++..+.+    .|.+.+ .+-||++||..+.-+.+.    
T Consensus       122 l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~p~----  196 (312)
T KOG1014|consen  122 LAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPTPL----  196 (312)
T ss_pred             hcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccChh----
Confidence            443  5789999998663       1222334778888887555555    444555 679999999876433211    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK  206 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~  206 (249)
                                        .+.|+.||...+.+.+.+..++   |+.+-.+-|..|-+++....
T Consensus       197 ------------------~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  197 ------------------LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             ------------------HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence                              3579999998887777776664   89999999999999886543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.48  E-value=1e-13  Score=107.99  Aligned_cols=189  Identities=16%  Similarity=0.070  Sum_probs=126.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEE--cCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV--RSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~--r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +.+.+|+||++.+||..++..+.+++.+.....  |..        ...+.+....  +.......+|+++...+.++++
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~--------a~~~~L~v~~--gd~~v~~~g~~~e~~~l~al~e   74 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLL--------AELEGLKVAY--GDDFVHVVGDITEEQLLGALRE   74 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccc--------ccccceEEEe--cCCcceechHHHHHHHHHHHHh
Confidence            456789999999999999999999887654443  333        1122221111  1122234556666655555544


Q ss_pred             -------CCCEEEEccccCCC--------CCCChHHHhhhhHHhHHHHHHHHHHhc--CC--cceEEEEcccceeeccCC
Q 025660           82 -------GCTGVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSCLKS--GT--VKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        82 -------~~d~vih~a~~~~~--------~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~--~~~~v~~SS~~~~~~~~~  142 (249)
                             +.|+||||||....        ...+.++.+++.|+.+...|..++.+.  ++  .+-+|++||.++..+..+
T Consensus        75 ~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~  154 (253)
T KOG1204|consen   75 APRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSS  154 (253)
T ss_pred             hhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccH
Confidence                   36999999997654        233555699999999988888777543  21  478999999887655533


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCCCC------CCccHHHH
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPK------FAGSVRSS  214 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~~~------~~~~~~~~  214 (249)
                                            ...|+.+|++-+.+.+.++.+.  ++++..++||.|.+++.-.-      .+..+..+
T Consensus       155 ----------------------wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f  212 (253)
T KOG1204|consen  155 ----------------------WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMF  212 (253)
T ss_pred             ----------------------HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHH
Confidence                                  2369999999999999887663  89999999999999874321      22334455


Q ss_pred             HHHHcCCCcc
Q 025660          215 LALILGNVKL  224 (249)
Q Consensus       215 ~~~~~~~~~~  224 (249)
                      ......++.+
T Consensus       213 ~el~~~~~ll  222 (253)
T KOG1204|consen  213 KELKESGQLL  222 (253)
T ss_pred             HHHHhcCCcC
Confidence            5554444433

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.48  E-value=3.7e-13  Score=100.97  Aligned_cols=159  Identities=18%  Similarity=0.157  Sum_probs=122.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++..+|.||||..|+.+++++++.+  .+|+++.|++.              ..++....+.....|...-+++...++
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~--------------~d~at~k~v~q~~vDf~Kl~~~a~~~q   82 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL--------------PDPATDKVVAQVEVDFSKLSQLATNEQ   82 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccC--------------CCccccceeeeEEechHHHHHHHhhhc
Confidence            56789999999999999999999998  48999999851              112233456778889999899999999


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      +.|+.+.+-|.+.....  .+..+++.-.-...+++++++.+ +++|+.+||..+   ++.                   
T Consensus        83 g~dV~FcaLgTTRgkaG--adgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GA---d~s-------------------  137 (238)
T KOG4039|consen   83 GPDVLFCALGTTRGKAG--ADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGA---DPS-------------------  137 (238)
T ss_pred             CCceEEEeecccccccc--cCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCC---Ccc-------------------
Confidence            99999988887655211  12455666666778899999999 999999999764   211                   


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK  206 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~  206 (249)
                        -+..|-..|...|.-+.++.-   -++.++|||.+.+......
T Consensus       138 --SrFlY~k~KGEvE~~v~eL~F---~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  138 --SRFLYMKMKGEVERDVIELDF---KHIIILRPGPLLGERTESR  177 (238)
T ss_pred             --cceeeeeccchhhhhhhhccc---cEEEEecCcceeccccccc
Confidence              134688999999988877643   3789999999999876544

>PRK06720 hypothetical protein; Provisional

Probab=99.45  E-value=2.1e-12  Score=99.39  Aligned_cols=124  Identities=13%  Similarity=0.075  Sum_probs=83.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++++++||||+++||.++++.|.++|++|++++|+.        +..... +++...+....++.+|+++.+++.++++ 
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~   86 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQ--------ESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISI   86 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999876        222211 2222223356788999999998887654 


Q ss_pred             ------CCCEEEEccccCCC----CCCChHHHhhhhHHhH----HHHHHHHHHhcC------CcceEEEEcccce
Q 025660           82 ------GCTGVLHVATPVDF----EDKEPEEVITQRAING----TLGILKSCLKSG------TVKRVVYTSSNAA  136 (249)
Q Consensus        82 ------~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~----t~~l~~~~~~~~------~~~~~v~~SS~~~  136 (249)
                            ++|++|||||....    ...... .....|+.+    ++.+...+.+.+      ..++|..+||..+
T Consensus        87 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         87 TLNAFSRIDMLFQNAGLYKIDSIFSRQQEN-DSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccccchh-HhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence                  58999999997553    111111 122444444    344444433321      2568888888764

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.41  E-value=4.6e-12  Score=108.36  Aligned_cols=167  Identities=23%  Similarity=0.229  Sum_probs=109.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh-hhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~   82 (249)
                      +.++|+|+||||.+|+.+++.|+++|+.|.++.|+.        ++...+............+..|...+ +....+.+.
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~--------~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~  149 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDE--------QKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEA  149 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccCh--------hhhhhhhcccccccccceeeeccccccchhhhhhhh
Confidence            456899999999999999999999999999999998        44444433222223455666665444 444555543


Q ss_pred             C----CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           83 C----TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        83 ~----d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                      +    .+++-+++-.+..+ |.. .-+.+.-.|+.+++++|+..+ ++|++++||+.+--..  ...+....        
T Consensus       150 ~~~~~~~v~~~~ggrp~~e-d~~-~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~--~~~~~~~~--------  216 (411)
T KOG1203|consen  150 VPKGVVIVIKGAGGRPEEE-DIV-TPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFN--QPPNILLL--------  216 (411)
T ss_pred             ccccceeEEecccCCCCcc-cCC-CcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccC--CCchhhhh--------
Confidence            3    45665655433321 111 345677899999999999999 9999999986542111  00000000        


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCC
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~  201 (249)
                            ...+-.+|..+|..+.    +.|++.++|||+...-.
T Consensus       217 ------~~~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  217 ------NGLVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             ------hhhhhHHHHhHHHHHH----hcCCCcEEEeccccccC
Confidence                  1123356666666655    47999999999987654

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.40  E-value=2.3e-12  Score=100.63  Aligned_cols=199  Identities=17%  Similarity=0.085  Sum_probs=140.9

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCEE
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGV   86 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   86 (249)
                      ..++.|+.||.|+++|+.....+++|-++.|++.         .+.+   ..+.+.+.++.+|....+-+.....+.+.+
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~---------k~~l---~sw~~~vswh~gnsfssn~~k~~l~g~t~v  121 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN---------KQTL---SSWPTYVSWHRGNSFSSNPNKLKLSGPTFV  121 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccC---------cchh---hCCCcccchhhccccccCcchhhhcCCccc
Confidence            5789999999999999999999999999999861         1111   223446788889988888777788889999


Q ss_pred             EEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCc
Q 025660           87 LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK  166 (249)
Q Consensus        87 ih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~  166 (249)
                      +-+++....    .. .+...|-....+-++++.+.+ +++|+|+|-.. ++..+-                    .|+ 
T Consensus       122 ~e~~ggfgn----~~-~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d-~~~~~~--------------------i~r-  173 (283)
T KOG4288|consen  122 YEMMGGFGN----II-LMDRINGTANINAVKAAAKAG-VPRFVYISAHD-FGLPPL--------------------IPR-  173 (283)
T ss_pred             HHHhcCccc----hH-HHHHhccHhhHHHHHHHHHcC-CceEEEEEhhh-cCCCCc--------------------cch-
Confidence            988886443    22 667778888888899999999 99999999754 221110                    123 


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHH-------HHHHHHcCCCcccc-cccccccccchh
Q 025660          167 SYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR-------SSLALILGNVKLKI-CCVMNRSHTLFV  238 (249)
Q Consensus       167 ~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~i~v  238 (249)
                      .|-.+|+++|.-+...   ++.+-.++|||++||-..-.+....+.       +..+.+. ++.-.+ .-+.-.+..+.+
T Consensus       174 GY~~gKR~AE~Ell~~---~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~-k~~~kLp~lg~l~~ppvnv  249 (283)
T KOG4288|consen  174 GYIEGKREAEAELLKK---FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFAL-KPLNKLPLLGPLLAPPVNV  249 (283)
T ss_pred             hhhccchHHHHHHHHh---cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhh-chhhcCcccccccCCCcCH
Confidence            6999999999877653   568999999999999854333222222       2222221 111112 223445678899


Q ss_pred             hHHHhhhhccC
Q 025660          239 YAIAFAFAFNV  249 (249)
Q Consensus       239 ~d~a~a~~~~~  249 (249)
                      +++|.+.+-||
T Consensus       250 e~VA~aal~ai  260 (283)
T KOG4288|consen  250 ESVALAALKAI  260 (283)
T ss_pred             HHHHHHHHHhc
Confidence            99998887664

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.37  E-value=3.2e-13  Score=101.00  Aligned_cols=166  Identities=19%  Similarity=0.191  Sum_probs=121.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++-..||||+.+.+|++.++.|.++|..|.+++...        ++-... ++   .+.++-+...|++.++++..++. 
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~--------skg~~vake---lg~~~vf~padvtsekdv~aala~   76 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQ--------SKGADVAKE---LGGKVVFTPADVTSEKDVRAALAK   76 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCc--------ccchHHHHH---hCCceEEeccccCcHHHHHHHHHH
Confidence            445689999999999999999999999999998765        221211 22   23478899999999998888776 


Q ss_pred             ------CCCEEEEccccCCC------------CCCChHHHhhhhHHhHHHHHHHHHHh----c-----CCcceEEEEccc
Q 025660           82 ------GCTGVLHVATPVDF------------EDKEPEEVITQRAINGTLGILKSCLK----S-----GTVKRVVYTSSN  134 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------------~~~~~~~~~~~~n~~~t~~l~~~~~~----~-----~~~~~~v~~SS~  134 (249)
                            +.|..+||||+.-.            ..+++. ..+++|+.||.++++....    .     +..+.+|...|.
T Consensus        77 ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfq-rvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasv  155 (260)
T KOG1199|consen   77 AKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQ-RVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASV  155 (260)
T ss_pred             HHhhccceeeeeeccceeeeeeeeeecccccccHHHhh-heeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeecee
Confidence                  47999999997422            223333 7889999999998885431    1     223468888887


Q ss_pred             ceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHH----HHHHHHHHHHcCCcEEEeecCeEeCCCCC
Q 025660          135 AAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLT----ERAALEFAEEHGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~----e~~~~~~~~~~~~~~~~vrp~~v~g~~~~  204 (249)
                      .++-+..+                      ...|+.||...    --+.++++. .|++++.+-||..-+|.-.
T Consensus       156 aafdgq~g----------------------qaaysaskgaivgmtlpiardla~-~gir~~tiapglf~tplls  206 (260)
T KOG1199|consen  156 AAFDGQTG----------------------QAAYSASKGAIVGMTLPIARDLAG-DGIRFNTIAPGLFDTPLLS  206 (260)
T ss_pred             eeecCccc----------------------hhhhhcccCceEeeechhhhhccc-CceEEEeecccccCChhhh
Confidence            76544433                      45699999743    344555554 4899999999998888653

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.32  E-value=6.7e-11  Score=93.83  Aligned_cols=191  Identities=16%  Similarity=0.138  Sum_probs=129.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCe-----EEEEEcCCCCcccCCchhhhhhccC-CCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-----VTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-----V~~~~r~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      +.|.+||||++++||.+||.+|++...+     +.+.+|+..    +.++-...+.+. +....+++++..|+++..++.
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~----kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~   77 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMS----KAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVF   77 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChh----HHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHH
Confidence            4568999999999999999999988643     455667751    222333344333 333346788999999988777


Q ss_pred             HHHc-------CCCEEEEccccCCC--------------------------------CCCChHHHhhhhHHhHHHHHHHH
Q 025660           78 AAIA-------GCTGVLHVATPVDF--------------------------------EDKEPEEVITQRAINGTLGILKS  118 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~--------------------------------~~~~~~~~~~~~n~~~t~~l~~~  118 (249)
                      ++.+       ..|.|+.+||+.+.                                ...|.+...++.|+.|...|+..
T Consensus        78 ~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~  157 (341)
T KOG1478|consen   78 RASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRE  157 (341)
T ss_pred             HHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhh
Confidence            6654       57999999986532                                11344457889999999998887


Q ss_pred             HHhc---CCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEE
Q 025660          119 CLKS---GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVT  192 (249)
Q Consensus       119 ~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~  192 (249)
                      +.+.   +...++|.+||..+-   .+ .  ++-+     |+  .+.....+|..||++...+-....+..   |+...+
T Consensus       158 l~pll~~~~~~~lvwtSS~~a~---kk-~--lsle-----D~--q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyv  224 (341)
T KOG1478|consen  158 LEPLLCHSDNPQLVWTSSRMAR---KK-N--LSLE-----DF--QHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYV  224 (341)
T ss_pred             hhhHhhcCCCCeEEEEeecccc---cc-c--CCHH-----HH--hhhcCCCCcchhHHHHHHHHHHHhccccccchhhhc
Confidence            7643   213499999997642   11 1  1101     11  112235679999999998877765543   688889


Q ss_pred             eecCeEeCCCCCCCCCccH
Q 025660          193 LIPSMVVGPFICPKFAGSV  211 (249)
Q Consensus       193 vrp~~v~g~~~~~~~~~~~  211 (249)
                      +.||...+.......+.+.
T Consensus       225 v~pg~~tt~~~~~~l~~~~  243 (341)
T KOG1478|consen  225 VQPGIFTTNSFSEYLNPFT  243 (341)
T ss_pred             ccCceeecchhhhhhhhHH
Confidence            9999988876655544443

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.30  E-value=3.1e-11  Score=101.66  Aligned_cols=178  Identities=15%  Similarity=0.028  Sum_probs=120.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +|++|.|||++|.||+.++..|..++  .+++++++..      .......+....   .  .....+.+|++++.+.++
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~------~~g~a~Dl~~~~---~--~~~v~~~td~~~~~~~l~   75 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG------APGVAADLSHID---T--PAKVTGYADGELWEKALR   75 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC------CcccccchhhcC---c--CceEEEecCCCchHHHhC
Confidence            56799999999999999999998665  6899999843      001111111111   1  233456667666677889


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      ++|+||++||.......+.. ..+..|+..++++++.+++.+ ++++|+++|..+.....-....+.+.+.         
T Consensus        76 gaDvVVitaG~~~~~~~tR~-dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~sg---------  144 (321)
T PTZ00325         76 GADLVLICAGVPRKPGMTRD-DLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKAGV---------  144 (321)
T ss_pred             CCCEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhccC---------
Confidence            99999999998543223344 889999999999999999998 8899999997753211100000111221         


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCC
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~  204 (249)
                      .+|...||.+-.-.-++...+++..+++...|+ +.|.|...+
T Consensus       145 ~p~~~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        145 YDPRKLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             CChhheeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            124567888755555666667777789988888 777775443

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.6e-10  Score=89.60  Aligned_cols=102  Identities=20%  Similarity=0.249  Sum_probs=76.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCCCCCCeEEEEcCCCChhhHHHHHcC--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG--   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   82 (249)
                      |+++||||+||+|. +++.|+++|++|++.+|++        +....+.. +. ....+.++.+|++|++++.++++.  
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~--------~~~~~l~~~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l   70 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARRE--------VKLENVKREST-TPESITPLPLDYHDDDALKLAIKSTI   70 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCH--------HHHHHHHHHhh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            47999999998775 9999999999999999986        44443332 22 234678899999999999888763  


Q ss_pred             -----CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcc----eEEEEcccc
Q 025660           83 -----CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK----RVVYTSSNA  135 (249)
Q Consensus        83 -----~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~----~~v~~SS~~  135 (249)
                           +|.+|+.                 +...++.++..+|++.+ ++    +|+++=...
T Consensus        71 ~~~g~id~lv~~-----------------vh~~~~~~~~~~~~~~g-v~~~~~~~~h~~gs~  114 (177)
T PRK08309         71 EKNGPFDLAVAW-----------------IHSSAKDALSVVCRELD-GSSETYRLFHVLGSA  114 (177)
T ss_pred             HHcCCCeEEEEe-----------------ccccchhhHHHHHHHHc-cCCCCceEEEEeCCc
Confidence                 4555533                 33456789999999988 77    788876543

>PLN00106 malate dehydrogenase

Probab=99.19  E-value=1.7e-10  Score=97.35  Aligned_cols=177  Identities=14%  Similarity=0.003  Sum_probs=121.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ..+|.||||+|.||+.++..|..++  .+++++++++        .....+ ++.....  .....++.+.+++.+.+++
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--------~~g~a~-Dl~~~~~--~~~i~~~~~~~d~~~~l~~   86 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--------TPGVAA-DVSHINT--PAQVRGFLGDDQLGDALKG   86 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--------CCeeEc-hhhhCCc--CceEEEEeCCCCHHHHcCC
Confidence            3689999999999999999998776  4899999865        111111 1111011  1123355555668888999


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|+|||+||.......+. ...+..|....+.+.+.+.+.+ +..+++++|.-+....+--...+...+.         .
T Consensus        87 aDiVVitAG~~~~~g~~R-~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s~---------~  155 (323)
T PLN00106         87 ADLVIIPAGVPRKPGMTR-DDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAGV---------Y  155 (323)
T ss_pred             CCEEEEeCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcCC---------C
Confidence            999999999854422334 4899999999999999999999 7889999987652100000000011111         2


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCC
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~  203 (249)
                      +|...||.++.-.+++...+++..+++...|+-..+-+++.
T Consensus       156 p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~ViGeHg~  196 (323)
T PLN00106        156 DPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVVGGHAG  196 (323)
T ss_pred             CcceEEEEecchHHHHHHHHHHHhCCChhheEEEEEEeCCC
Confidence            34678999998899999999998899998886655555533

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.12  E-value=4e-09  Score=90.04  Aligned_cols=177  Identities=16%  Similarity=0.079  Sum_probs=105.6

Q ss_pred             CCeEEEeccchhhHHH--HHHHHHHCCCeEEEEEcCCCCcccC-------CchhhhhhccCCCCCCCeEEEEcCCCChhh
Q 025660            5 KGRVCVTGGTGFIASW--LIMRLLDHGYSVTTTVRSELDPEHR-------NSKDLSFLKNLPGASERLRIFHADLSHPDG   75 (249)
Q Consensus         5 ~~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~   75 (249)
                      +|++||||+++.+|.+  +++.| +.|++|+++++.......+       ..+....+.  ...+.....+.+|++++++
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a--~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFA--KAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHH--HhcCCceEEEEcCCCCHHH
Confidence            5799999999999999  89999 9999998888643100000       001111111  1223346788999999998


Q ss_pred             HHHHHc-------CCCEEEEccccCCCCC-------------------------------------CChHHHhhhhHHhH
Q 025660           76 FDAAIA-------GCTGVLHVATPVDFED-------------------------------------KEPEEVITQRAING  111 (249)
Q Consensus        76 ~~~~~~-------~~d~vih~a~~~~~~~-------------------------------------~~~~~~~~~~n~~~  111 (249)
                      ++++++       ++|+|||++|......                                     -...+....+.+.|
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg  197 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG  197 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence            887766       4899999999763311                                     00001112233444


Q ss_pred             HHHHHHHHHh---cC---CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH
Q 025660          112 TLGILKSCLK---SG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE  185 (249)
Q Consensus       112 t~~l~~~~~~---~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  185 (249)
                      ......++..   .+   .-.++|-+|..    +....-+.+                ....-|.+|...|..+++++.+
T Consensus       198 gedw~~Wi~al~~a~lla~g~~~va~TY~----G~~~t~p~Y----------------~~g~mG~AKa~LE~~~r~La~~  257 (398)
T PRK13656        198 GEDWELWIDALDEAGVLAEGAKTVAYSYI----GPELTHPIY----------------WDGTIGKAKKDLDRTALALNEK  257 (398)
T ss_pred             cchHHHHHHHHHhcccccCCcEEEEEecC----Ccceeeccc----------------CCchHHHHHHHHHHHHHHHHHH
Confidence            4333333322   11   12466666642    221110000                0124689999999988888765


Q ss_pred             c---CCcEEEeecCeEeCCCCC
Q 025660          186 H---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       186 ~---~~~~~~vrp~~v~g~~~~  204 (249)
                      .   |+++.++-.+.+-+.-..
T Consensus       258 L~~~giran~i~~g~~~T~Ass  279 (398)
T PRK13656        258 LAAKGGDAYVSVLKAVVTQASS  279 (398)
T ss_pred             hhhcCCEEEEEecCcccchhhh
Confidence            3   799999999988776543

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.08  E-value=1.1e-08  Score=80.42  Aligned_cols=168  Identities=14%  Similarity=0.123  Sum_probs=112.6

Q ss_pred             CCCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .++|++||+|-.  ..|++.|++.|.++|.++..+...+        ...+.++++.+......++.||+++.+++..++
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e--------~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f   75 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE--------RLEKRVEELAEELGSDLVLPCDVTNDESIDALF   75 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH--------HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHH
Confidence            367899999954  7899999999999999998887765        333344444333334568999999999888887


Q ss_pred             c-------CCCEEEEccccCCCC---------CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCC
Q 025660           81 A-------GCTGVLHVATPVDFE---------DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~---------~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      +       .+|.+||+.|..+..         ..+-+...+++...+...|++++++. +.-..++-++    |.+...-
T Consensus        76 ~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~r~  151 (259)
T COG0623          76 ATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSERV  151 (259)
T ss_pred             HHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----eccceee
Confidence            6       479999999987631         11111133444444445555555543 1134666555    4333221


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVG  200 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g  200 (249)
                      -                 |+ -|.-+..|+..|.-+++++.+.   |++++.|.-|.+-+
T Consensus       152 v-----------------Pn-YNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrT  193 (259)
T COG0623         152 V-----------------PN-YNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRT  193 (259)
T ss_pred             c-----------------CC-CchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHH
Confidence            1                 11 3568999999999999887764   79999988886543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=99.04  E-value=3.2e-09  Score=90.05  Aligned_cols=119  Identities=15%  Similarity=0.008  Sum_probs=80.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-------CeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-------YSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGF   76 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~   76 (249)
                      ..+|+||||+|++|++++..|+..+       ++++++++++.      .++.+.. .++..   .......|++...++
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~------~~~~~g~~~Dl~d---~~~~~~~~~~~~~~~   72 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA------LKALEGVVMELQD---CAFPLLKSVVATTDP   72 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc------cccccceeeehhh---ccccccCCceecCCH
Confidence            3579999999999999999999844       58999999651      0111110 01100   011223465556777


Q ss_pred             HHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcc
Q 025660           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSS  133 (249)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS  133 (249)
                      .+.++++|+|||+||.......+.. ..++.|+.-.+.+.+.+.+.. +...++.+|.
T Consensus        73 ~~~l~~aDiVI~tAG~~~~~~~~R~-~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          73 EEAFKDVDVAILVGAMPRKEGMERK-DLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             HHHhCCCCEEEEeCCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            7888999999999998654333333 889999999999999998884 2334555553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=98.87  E-value=2.9e-09  Score=83.36  Aligned_cols=199  Identities=11%  Similarity=-0.007  Sum_probs=118.4

Q ss_pred             CCeEEEeccchhhHHHHHH-----HHHHCC----CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh
Q 025660            5 KGRVCVTGGTGFIASWLIM-----RLLDHG----YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG   75 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~   75 (249)
                      ....++-+.+|+|+..|..     ++-+.+    |+|++++|++.        +           .++.+...|..-.  
T Consensus        12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg--------~-----------~ritw~el~~~Gi--   70 (315)
T KOG3019|consen   12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPG--------K-----------ARITWPELDFPGI--   70 (315)
T ss_pred             cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCC--------C-----------cccccchhcCCCC--
Confidence            4567888999999988776     555555    89999999872        0           1122222221110  


Q ss_pred             HHHHHcCCCEEEEccccC-----CCCCCChHHHhhhhHHhHHHHHHHHHHhcCC-cceEEEEcccceeeccCCCccccCC
Q 025660           76 FDAAIAGCTGVLHVATPV-----DFEDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        76 ~~~~~~~~d~vih~a~~~-----~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                          .-.|+.++|+++..     ..+...+.+..+...++.|..|++++.++.. .+.+|.+|..+.|.+  .....++|
T Consensus        71 ----p~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~p--S~s~eY~e  144 (315)
T KOG3019|consen   71 ----PISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVP--SESQEYSE  144 (315)
T ss_pred             ----ceehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecc--cccccccc
Confidence                01344444444432     1133334446666777889999999988753 347899988775433  33345666


Q ss_pred             CCCC-chhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccc
Q 025660          150 TFWS-DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICC  228 (249)
Q Consensus       150 ~~~~-~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (249)
                      +.+. +.+++.            +...|+-.........++++++|-|.|.|.+..-     +....-.++.+.--+++.
T Consensus       145 ~~~~qgfd~~s------------rL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa-----~~~M~lpF~~g~GGPlGs  207 (315)
T KOG3019|consen  145 KIVHQGFDILS------------RLCLEWEGAALKANKDVRVALIRIGVVLGKGGGA-----LAMMILPFQMGAGGPLGS  207 (315)
T ss_pred             ccccCChHHHH------------HHHHHHHHHhhccCcceeEEEEEEeEEEecCCcc-----hhhhhhhhhhccCCcCCC
Confidence            6653 344433            2222333223222236999999999999986422     222222222222224589


Q ss_pred             cccccccchhhHHHhhhhc
Q 025660          229 VMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       229 ~~~~~~~i~v~d~a~a~~~  247 (249)
                      |.+.+.|||++|++..+.+
T Consensus       208 G~Q~fpWIHv~DL~~li~~  226 (315)
T KOG3019|consen  208 GQQWFPWIHVDDLVNLIYE  226 (315)
T ss_pred             CCeeeeeeehHHHHHHHHH
Confidence            9999999999999987644

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.86  E-value=3.9e-08  Score=83.25  Aligned_cols=176  Identities=14%  Similarity=0.018  Sum_probs=113.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcCCCCcccCCchhhhhhccCC-CCCCCeEEEEcCCCChhhH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGF   76 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dl~~~~~~   76 (249)
                      .++|.|+||+|.+|..++..|+..|.       +++++++.....  ........+.... ....++.+     +  ...
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~--~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALK--ALEGVAMELEDCAFPLLAEIVI-----T--DDP   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCccc--ccceeehhhhhccccccCceEE-----e--cCc
Confidence            46899999999999999999998874       799999854100  0000001111111 10111221     1  122


Q ss_pred             HHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCC-cceEEEEcccceeeccCCCccccCCCCCCch
Q 025660           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (249)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (249)
                      .+.++++|+||.+||.......+.. +.+..|..-.+.+.+.+.+..+ ...+|.+|--.-....    ...+.. +   
T Consensus        73 ~~~~~daDivvitaG~~~k~g~tR~-dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~----~~~k~s-g---  143 (322)
T cd01338          73 NVAFKDADWALLVGAKPRGPGMERA-DLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNAL----IAMKNA-P---  143 (322)
T ss_pred             HHHhCCCCEEEEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHH----HHHHHc-C---
Confidence            4567799999999997544323333 7899999999999999998873 4455555531100000    000111 0   


Q ss_pred             hHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCC
Q 025660          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~  203 (249)
                           --++...||.++...+++...+++..+++...+|..+|+|+..
T Consensus       144 -----~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         144 -----DIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             -----CCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence                 0113567999999999999999998999999999999999874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.85  E-value=2.5e-08  Score=80.51  Aligned_cols=92  Identities=12%  Similarity=0.124  Sum_probs=57.4

Q ss_pred             cchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC--hhhHHHHHcCCCEEEEcc
Q 025660           13 GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH--PDGFDAAIAGCTGVLHVA   90 (249)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~vih~a   90 (249)
                      +||++|++|+++|+++|++|++++|..        ...    ..  ...+++++.++..+  .+.+.+.++++|+|||+|
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r~~--------~~~----~~--~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~A   89 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTTKT--------AVK----PE--PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSM   89 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEECcc--------ccc----CC--CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCC
Confidence            479999999999999999999998764        110    00  11245555544332  245666677899999999


Q ss_pred             ccCCCCCCChHHHhhhhHHhHHHHHHHHHHh
Q 025660           91 TPVDFEDKEPEEVITQRAINGTLGILKSCLK  121 (249)
Q Consensus        91 ~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~  121 (249)
                      |..+...   ....-..+...+..+.+.+++
T Consensus        90 Avsd~~~---~~~~~~~~~~~~~~v~~~~~~  117 (229)
T PRK06732         90 AVSDYTP---VYMTDLEEVSASDNLNEFLTK  117 (229)
T ss_pred             ccCCcee---hhhhhhhhhhhhhhhhhhhcc
Confidence            9866421   111222334444555556654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.85  E-value=2.4e-08  Score=85.56  Aligned_cols=77  Identities=25%  Similarity=0.330  Sum_probs=66.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      |++|||.|| |+||+.++..|+++| .+|++.+|+.        ++...+.....  .+++.++.|+.|.+++.+++++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~--------~~~~~i~~~~~--~~v~~~~vD~~d~~al~~li~~~   69 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSK--------EKCARIAELIG--GKVEALQVDAADVDALVALIKDF   69 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCH--------HHHHHHHhhcc--ccceeEEecccChHHHHHHHhcC
Confidence            468999997 999999999999999 8999999997        66665543322  27899999999999999999999


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|||++.+
T Consensus        70 d~VIn~~p~   78 (389)
T COG1748          70 DLVINAAPP   78 (389)
T ss_pred             CEEEEeCCc
Confidence            999999986

>PRK09620 hypothetical protein; Provisional

Probab=98.84  E-value=1.1e-08  Score=82.32  Aligned_cols=81  Identities=19%  Similarity=0.227  Sum_probs=57.1

Q ss_pred             CCCeEEEeccc----------------hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGT----------------GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      .+++||||+|.                ||+|++|+++|+++|++|+++++...       ....   ..+ .......+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~-------~~~~---~~~-~~~~~~~V~   70 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFA-------EKPN---DIN-NQLELHPFE   70 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCc-------CCCc---ccC-CceeEEEEe
Confidence            56899999886                99999999999999999999876430       0000   000 012334456


Q ss_pred             cCCCChhhHHHHHc--CCCEEEEccccCCC
Q 025660           68 ADLSHPDGFDAAIA--GCTGVLHVATPVDF   95 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~--~~d~vih~a~~~~~   95 (249)
                      +|....+.+.++++  ++|+|||+||..++
T Consensus        71 s~~d~~~~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         71 GIIDLQDKMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             cHHHHHHHHHHHhcccCCCEEEECccccce
Confidence            64333467778785  58999999999776

>PRK05086 malate dehydrogenase; Provisional

Probab=98.72  E-value=2.8e-07  Score=77.88  Aligned_cols=118  Identities=14%  Similarity=0.056  Sum_probs=81.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHH---CCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLD---HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      |+|+|+||+|.||++++..|..   .++++++++|++        .......++... .....+.+  .+.+++.+.+++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~--------~~~g~alDl~~~-~~~~~i~~--~~~~d~~~~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP--------VTPGVAVDLSHI-PTAVKIKG--FSGEDPTPALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC--------CCcceehhhhcC-CCCceEEE--eCCCCHHHHcCC
Confidence            4899999999999999988854   246888888875        110000011110 11122333  334455566788


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccce
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~  136 (249)
                      +|+||.++|.......+.. ..+..|......+++.+.+.+ .+++|.+.|.-+
T Consensus        70 ~DiVIitaG~~~~~~~~R~-dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~  121 (312)
T PRK05086         70 ADVVLISAGVARKPGMDRS-DLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPV  121 (312)
T ss_pred             CCEEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCch
Confidence            9999999998554323344 889999999999999999998 788888888654

>cd00704 MDH Malate dehydrogenase

Probab=98.67  E-value=3.8e-07  Score=77.31  Aligned_cols=106  Identities=13%  Similarity=0.014  Sum_probs=74.9

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh------
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP------   73 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~------   73 (249)
                      +|.||||+|.+|+.++..|...+.       +++++++++..      +             ..+....|+.|.      
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~------~-------------~~~g~~~Dl~d~~~~~~~   62 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM------K-------------ALEGVVMELQDCAFPLLK   62 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc------C-------------ccceeeeehhhhcccccC
Confidence            699999999999999999998652       58899887510      0             111222222222      


Q ss_pred             -----hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEc
Q 025660           74 -----DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTS  132 (249)
Q Consensus        74 -----~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~S  132 (249)
                           ....+.++++|+|||+||.......+. .+.+..|..-.+.+.+.+.+. ++...++.+|
T Consensus        63 ~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR-~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          63 GVVITTDPEEAFKDVDVAILVGAFPRKPGMER-ADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             CcEEecChHHHhCCCCEEEEeCCCCCCcCCcH-HHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence                 345677889999999999855432333 389999999999999999988 4344555554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.64  E-value=3e-07  Score=80.21  Aligned_cols=76  Identities=24%  Similarity=0.429  Sum_probs=59.7

Q ss_pred             EEEeccchhhHHHHHHHHHHCC-C-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            8 VCVTGGTGFIASWLIMRLLDHG-Y-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+|.|| |++|+.+++.|++++ . +|++.+|+.        ++.+.+.+.. ...++..++.|+.|.+++.++++++|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~--------~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNP--------EKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSH--------HHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCH--------HHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCE
Confidence            789999 999999999999986 4 899999998        6655554321 334799999999999999999999999


Q ss_pred             EEEccccC
Q 025660           86 VLHVATPV   93 (249)
Q Consensus        86 vih~a~~~   93 (249)
                      ||||+++.
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999974

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.63  E-value=1e-07  Score=75.07  Aligned_cols=81  Identities=20%  Similarity=0.109  Sum_probs=62.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++++|+||+|.+|+.+++.|.+.|++|++++|+.        ++.+.+.+............+|..+.+++.+.++++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~--------~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDL--------ERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGA   98 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcC
Confidence            457899999999999999999999999999999986        444443221111113456677889999999999999


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+||++...
T Consensus        99 diVi~at~~  107 (194)
T cd01078          99 DVVFAAGAA  107 (194)
T ss_pred             CEEEECCCC
Confidence            999986553

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.57  E-value=1.2e-06  Score=74.40  Aligned_cols=163  Identities=15%  Similarity=0.016  Sum_probs=96.6

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh-----
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD-----   74 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~-----   74 (249)
                      +|.|+||+|.+|+.++..|...+.       +++++++.+.      .++             .+-...|+.|..     
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~------~~~-------------a~g~~~Dl~d~~~~~~~   61 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPA------MKV-------------LEGVVMELMDCAFPLLD   61 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCc------ccc-------------cceeEeehhcccchhcC
Confidence            589999999999999999987553       6999998651      000             111222222222     


Q ss_pred             ------hHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCcccc
Q 025660           75 ------GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        75 ------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                            ...+.++++|+|||+||.......+.. ..+..|+.-.+.+.+.+.+. ++...++.+|--.-....    ...
T Consensus        62 ~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~-~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~----v~~  136 (324)
T TIGR01758        62 GVVPTHDPAVAFTDVDVAILVGAFPRKEGMERR-DLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNAL----VLS  136 (324)
T ss_pred             ceeccCChHHHhCCCCEEEEcCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHH----HHH
Confidence                  335677899999999998544223344 88999999999999999998 434455555531100000    000


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                      +.. +        ..+++..=..+....-++-..+++..+++...|+-+.|+|..
T Consensus       137 ~~s-g--------~~~~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeH  182 (324)
T TIGR01758       137 NYA-P--------SIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNH  182 (324)
T ss_pred             HHc-C--------CCCcceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECC
Confidence            000 0        000111111122333455555666668888888777777753

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.49  E-value=2e-06  Score=70.36  Aligned_cols=74  Identities=15%  Similarity=0.185  Sum_probs=56.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+|||+||||. |+.|++.|.+.|++|++..+..        ...+.+...     ....+..+..+.+++.++++  ++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~--------~~~~~~~~~-----g~~~v~~g~l~~~~l~~~l~~~~i   66 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTS--------EGKHLYPIH-----QALTVHTGALDPQELREFLKRHSI   66 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccC--------Ccccccccc-----CCceEEECCCCHHHHHHHHHhcCC
Confidence            47999999999 9999999999999999999987        222222221     12345566677788888886  49


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+||+.+.++
T Consensus        67 ~~VIDAtHPf   76 (256)
T TIGR00715        67 DILVDATHPF   76 (256)
T ss_pred             CEEEEcCCHH
Confidence            9999998753

This enzyme was found to be a monomer by gel filtration.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.48  E-value=6e-07  Score=78.10  Aligned_cols=74  Identities=20%  Similarity=0.227  Sum_probs=58.3

Q ss_pred             CCCeEEEecc----------------chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      +++++|||||                +|.+|.+++++|.++|++|++++++.        +    +. .+   .  ....
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~--------~----~~-~~---~--~~~~  248 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPV--------N----LP-TP---A--GVKR  248 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCc--------c----cc-CC---C--CcEE
Confidence            4689999999                89999999999999999999998765        1    00 11   1  1346


Q ss_pred             cCCCChhhHHHHHc----CCCEEEEccccCCC
Q 025660           68 ADLSHPDGFDAAIA----GCTGVLHVATPVDF   95 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~----~~d~vih~a~~~~~   95 (249)
                      +|+++.+++.+.++    .+|++||+||..+.
T Consensus       249 ~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        249 IDVESAQEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             EccCCHHHHHHHHHHhcCCCCEEEEccccccc
Confidence            79999887777764    58999999998665

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.43  E-value=1.1e-06  Score=73.30  Aligned_cols=87  Identities=20%  Similarity=0.320  Sum_probs=68.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHH----CCCeEEEEEcCCCCcccCCchhhhhh-ccCCC----CCCCeEEEEcCCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLD----HGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG----ASERLRIFHADLS   71 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~----~~~~~~~~~~Dl~   71 (249)
                      |+...--++|-||+||.|.+++++++.    ++...-+..|++        .+++.. +....    ..+...++.+|..
T Consensus         1 M~~~~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~--------~KL~~vL~~~~~k~~~~ls~~~i~i~D~~   72 (423)
T KOG2733|consen    1 MAAIRYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNE--------KKLQEVLEKVGEKTGTDLSSSVILIADSA   72 (423)
T ss_pred             CCCceeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCH--------HHHHHHHHHHhhccCCCcccceEEEecCC
Confidence            444344589999999999999999999    677888888988        565543 22221    1233348999999


Q ss_pred             ChhhHHHHHcCCCEEEEccccCCC
Q 025660           72 HPDGFDAAIAGCTGVLHVATPVDF   95 (249)
Q Consensus        72 ~~~~~~~~~~~~d~vih~a~~~~~   95 (249)
                      |++++.+..+.+.+|+||+|+...
T Consensus        73 n~~Sl~emak~~~vivN~vGPyR~   96 (423)
T KOG2733|consen   73 NEASLDEMAKQARVIVNCVGPYRF   96 (423)
T ss_pred             CHHHHHHHHhhhEEEEecccccee
Confidence            999999999999999999999766

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.37  E-value=1e-06  Score=71.11  Aligned_cols=64  Identities=16%  Similarity=0.177  Sum_probs=46.7

Q ss_pred             cchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-------CCCE
Q 025660           13 GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-------GCTG   85 (249)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   85 (249)
                      ++|+||++++++|+++|++|+++++..        .    +...       ....+|+.+.+++.++++       ++|+
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~--------~----l~~~-------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDi   83 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKR--------A----LKPE-------PHPNLSIREIETTKDLLITLKELVQEHDI   83 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChh--------h----cccc-------cCCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence            379999999999999999999987643        0    0000       013478888877666543       5899


Q ss_pred             EEEccccCCC
Q 025660           86 VLHVATPVDF   95 (249)
Q Consensus        86 vih~a~~~~~   95 (249)
                      +||+||....
T Consensus        84 LVnnAgv~d~   93 (227)
T TIGR02114        84 LIHSMAVSDY   93 (227)
T ss_pred             EEECCEeccc
Confidence            9999997654

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.36  E-value=1.3e-06  Score=74.15  Aligned_cols=73  Identities=23%  Similarity=0.204  Sum_probs=53.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-C-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-G-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+++|+||||+|+||+.++++|.++ | .+++++.|+.        .+...+...        +..+++.   ++.+.+.
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~--------~rl~~La~e--------l~~~~i~---~l~~~l~  214 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQ--------ERLQELQAE--------LGGGKIL---SLEEALP  214 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCH--------HHHHHHHHH--------hccccHH---hHHHHHc
Confidence            4589999999999999999999865 5 5899998876        444444321        1123333   4667888


Q ss_pred             CCCEEEEccccCCC
Q 025660           82 GCTGVLHVATPVDF   95 (249)
Q Consensus        82 ~~d~vih~a~~~~~   95 (249)
                      ++|+|||+++....
T Consensus       215 ~aDiVv~~ts~~~~  228 (340)
T PRK14982        215 EADIVVWVASMPKG  228 (340)
T ss_pred             cCCEEEECCcCCcC
Confidence            99999999997544

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.34  E-value=8.7e-06  Score=60.72  Aligned_cols=111  Identities=16%  Similarity=0.099  Sum_probs=75.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hccCCCC-CCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNLPGA-SERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~-~~~~~~~~~Dl~~~~~~~~   78 (249)
                      +||.|+||+|.+|++++..|...+  .+++++++++        ++.+.    ++..... .....+..   .+.+    
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~--------~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~----   65 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINE--------DKAEGEALDLSHASAPLPSPVRITS---GDYE----   65 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSH--------HHHHHHHHHHHHHHHGSTEEEEEEE---SSGG----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCc--------ccceeeehhhhhhhhhccccccccc---cccc----
Confidence            489999999999999999999987  4899999986        32222    1111111 11222222   3333    


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      .++++|+||-+||.......+. .+.++.|..-.+.+.+.+.+..+...++.+|
T Consensus        66 ~~~~aDivvitag~~~~~g~sR-~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   66 ALKDADIVVITAGVPRKPGMSR-LDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             GGTTESEEEETTSTSSSTTSSH-HHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             ccccccEEEEeccccccccccH-HHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            3568999999999754422333 4889999999999999999988344444443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.33  E-value=1.5e-06  Score=72.71  Aligned_cols=83  Identities=13%  Similarity=0.071  Sum_probs=59.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCe-EEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++++++|+|| |++|++++..|.+.|.+ |++++|+..     ..++.+.+ +++........+..+|+.+.+++.+.++
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~-----~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDD-----FYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCch-----HHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc
Confidence            3578999998 79999999999999985 999999751     00122222 2222222234566789988888888888


Q ss_pred             CCCEEEEcccc
Q 025660           82 GCTGVLHVATP   92 (249)
Q Consensus        82 ~~d~vih~a~~   92 (249)
                      .+|+|||+--.
T Consensus       199 ~~DilINaTp~  209 (289)
T PRK12548        199 SSDILVNATLV  209 (289)
T ss_pred             cCCEEEEeCCC
Confidence            89999987644

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.28  E-value=3.5e-05  Score=65.28  Aligned_cols=115  Identities=13%  Similarity=0.154  Sum_probs=77.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChh
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPD   74 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~   74 (249)
                      |+...++|.|+|+ |.+|+.++-.|...|.  ++.+++++.        ++.+.    +........+..+...      
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~--------~~~~g~~~Dl~~~~~~~~~~~i~~~------   66 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINK--------EKAEGDAMDLSHAVPFTSPTKIYAG------   66 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCC--------chhHHHHHHHHhhccccCCeEEEeC------
Confidence            3455689999997 9999999999999886  899999976        32221    2221111122333222      


Q ss_pred             hHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           75 GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      .+ +.++++|+||.+||.......+. ...+..|..-.+.+++.+.+.++...++.+|
T Consensus        67 ~~-~~~~~adivIitag~~~k~g~~R-~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         67 DY-SDCKDADLVVITAGAPQKPGETR-LDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             CH-HHhCCCCEEEEecCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            23 34689999999999754322233 3889999999999999999887444555544

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.23  E-value=1.2e-05  Score=68.04  Aligned_cols=116  Identities=13%  Similarity=0.108  Sum_probs=74.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hc-cCCCCCCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LK-NLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~-~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      ++|.|+||+|.+|..++..|+..|+  +|++++|...      .+++..    +. .+...+....     ++-..+++ 
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~------~~~l~~~~~dl~d~~~~~~~~~~-----i~~~~d~~-   68 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKS------LEKLKGLRLDIYDALAAAGIDAE-----IKISSDLS-   68 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECccc------ccccccccchhhhchhccCCCcE-----EEECCCHH-
Confidence            4799999999999999999999986  5999999430      011111    11 0001111111     11111233 


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      .+.++|+||-++|..... .......+..|..-.+.+++.+.+..+...+|.+++.
T Consensus        69 ~l~~aDiViitag~p~~~-~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          69 DVAGSDIVIITAGVPRKE-GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             HhCCCCEEEEecCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            488999999999975432 2222378889999999999999887644566766653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.13  E-value=8.9e-06  Score=70.63  Aligned_cols=102  Identities=19%  Similarity=0.139  Sum_probs=70.3

Q ss_pred             CCCeEEEecc----------------chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      +++++|||||                +|.+|.+++++|..+|++|+++.+...        .     ..+   .  ....
T Consensus       184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~--------~-----~~~---~--~~~~  245 (390)
T TIGR00521       184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVS--------L-----LTP---P--GVKS  245 (390)
T ss_pred             CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCc--------c-----CCC---C--CcEE
Confidence            4589999999                357999999999999999999887651        1     011   1  1246


Q ss_pred             cCCCChhhH-HHHH----cCCCEEEEccccCCCCCCC----hH---HHhhhhHHhHHHHHHHHHHhcC
Q 025660           68 ADLSHPDGF-DAAI----AGCTGVLHVATPVDFEDKE----PE---EVITQRAINGTLGILKSCLKSG  123 (249)
Q Consensus        68 ~Dl~~~~~~-~~~~----~~~d~vih~a~~~~~~~~~----~~---~~~~~~n~~~t~~l~~~~~~~~  123 (249)
                      .|+++.+++ +.++    .++|++||+||..++....    ..   ...+..|+.-+..++..+++..
T Consensus       246 ~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       246 IKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             EEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            788888777 4444    3589999999987662110    00   1223456677778888888765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.08  E-value=0.00012  Score=61.81  Aligned_cols=110  Identities=13%  Similarity=0.096  Sum_probs=74.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhc----cCCC-CCCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLK----NLPG-ASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~----~~~~-~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      ++|.|+|+ |.+|+.++..|+..|  +++.+++|++        ++.+.+.    .... ......+...   +   ++ 
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~--------~~~~~~a~dL~~~~~~~~~~~~i~~~---~---~~-   64 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINE--------EKAEGEALDLEDALAFLPSPVKIKAG---D---YS-   64 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCc--------chhhHhHhhHHHHhhccCCCeEEEcC---C---HH-
Confidence            37999995 899999999999998  6899999987        3333221    1110 1112222221   2   22 


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      .++++|+||+++|.......+.. ..+..|..-.+.+.+.+.+..+...++.+|
T Consensus        65 ~l~~aDIVIitag~~~~~g~~R~-dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          65 DCKDADIVVITAGAPQKPGETRL-DLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             HhCCCCEEEEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            35799999999997544322333 889999999999999999987444555554

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.06  E-value=5.6e-05  Score=64.14  Aligned_cols=175  Identities=14%  Similarity=0.016  Sum_probs=99.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcCCCCcccCCchhhhhhccCC-CCCCCeEEEEcCCCChhhH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGF   76 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dl~~~~~~   76 (249)
                      ..+|.|+||+|.+|+.++..|+..+.       +++++++.+...  ........+.... .......+     +  ...
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~--~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~   73 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMK--ALEGVAMELEDCAFPLLAGVVA-----T--TDP   73 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCccc--ccchHHHHHhhccccccCCcEE-----e--cCh
Confidence            45899999999999999999998873       799998854100  0001111111111 11111111     1  123


Q ss_pred             HHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCC-CCCch
Q 025660           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET-FWSDV  155 (249)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~-~~~~~  155 (249)
                      .+.++++|+||.+||.......+. .+.+..|..-.+.+.+.+.+..+...++.+-|.-+-.-   .....+.. ..   
T Consensus        74 ~~~~~daDvVVitAG~~~k~g~tR-~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~---t~v~~k~s~g~---  146 (323)
T TIGR01759        74 EEAFKDVDAALLVGAFPRKPGMER-ADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTN---ALIASKNAPDI---  146 (323)
T ss_pred             HHHhCCCCEEEEeCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHH---HHHHHHHcCCC---
Confidence            456779999999999754322333 38999999999999999999873144444444322000   00000000 00   


Q ss_pred             hHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                             ++....|.+..-.-++-..+++..+++...|+-..|+|..
T Consensus       147 -------p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeH  186 (323)
T TIGR01759       147 -------PPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNH  186 (323)
T ss_pred             -------CHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecC
Confidence                   0122333344444455555666668888888777777753

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.06  E-value=2.9e-05  Score=69.15  Aligned_cols=79  Identities=20%  Similarity=0.107  Sum_probs=56.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..++++|+|+|+++ +|.++++.|+++|++|++.+++..       +..+ .+.++...  ++.++.+|..+     +.
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~-------~~~~~~~~~l~~~--~~~~~~~~~~~-----~~   65 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEE-------DQLKEALEELGEL--GIELVLGEYPE-----EF   65 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCch-------HHHHHHHHHHHhc--CCEEEeCCcch-----hH
Confidence            544678999999888 999999999999999999998751       1111 11222111  35678888876     24


Q ss_pred             HcCCCEEEEccccCC
Q 025660           80 IAGCTGVLHVATPVD   94 (249)
Q Consensus        80 ~~~~d~vih~a~~~~   94 (249)
                      ..++|+||+++|...
T Consensus        66 ~~~~d~vv~~~g~~~   80 (450)
T PRK14106         66 LEGVDLVVVSPGVPL   80 (450)
T ss_pred             hhcCCEEEECCCCCC
Confidence            567999999998743

>PRK05442 malate dehydrogenase; Provisional

Probab=98.06  E-value=5.4e-05  Score=64.35  Aligned_cols=178  Identities=16%  Similarity=0.031  Sum_probs=98.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcCCCCcccCCchhhhhhccCC-CCCCCeEEEEcCCCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSH   72 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dl~~   72 (249)
                      |+ .+.+|.|+||+|.+|+.++..|+..+.       +++++++.+...  ........+.... .......+     + 
T Consensus         1 ~~-~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~--~~~g~a~Dl~~~~~~~~~~~~i-----~-   71 (326)
T PRK05442          1 MK-APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALK--ALEGVVMELDDCAFPLLAGVVI-----T-   71 (326)
T ss_pred             CC-CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCccc--ccceeehhhhhhhhhhcCCcEE-----e-
Confidence            44 566999999999999999999988663       789998854100  0000011111111 10011211     1 


Q ss_pred             hhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCCC
Q 025660           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                       ....+.++++|+||-+||.......+. .+.+..|..-.+.+.+.+.+.. +...++.+|--.-....    ...+. +
T Consensus        72 -~~~y~~~~daDiVVitaG~~~k~g~tR-~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~----v~~k~-s  144 (326)
T PRK05442         72 -DDPNVAFKDADVALLVGARPRGPGMER-KDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNAL----IAMKN-A  144 (326)
T ss_pred             -cChHHHhCCCCEEEEeCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHH----HHHHH-c
Confidence             122456779999999999754322333 3889999999999999999844 24455555531100000    00000 0


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                      |       . -++....|.+-.-.-++...+++..+++...|+...|+|..
T Consensus       145 ~-------g-~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeH  187 (326)
T PRK05442        145 P-------D-LPAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNH  187 (326)
T ss_pred             C-------C-CCHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECC
Confidence            0       0 00112233333444455555666668887777776766653

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.00  E-value=0.0001  Score=62.08  Aligned_cols=116  Identities=13%  Similarity=0.034  Sum_probs=75.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|.|+|++|.+|+.++..|..++  .++++++++.      .....-.|....   ....+...  ...+++.+.++++
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~------a~g~alDL~~~~---~~~~i~~~--~~~~~~y~~~~da   69 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVN------TPGVAADLSHIN---TPAKVTGY--LGPEELKKALKGA   69 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCc------cceeehHhHhCC---CcceEEEe--cCCCchHHhcCCC
Confidence            379999999999999999999888  4888888762      001111111111   01111111  0123355678899


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      |+||-+||.......+.. +.+..|..-.+.+.+.+.+..+...++.+|-
T Consensus        70 DivvitaG~~~k~g~tR~-dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          70 DVVVIPAGVPRKPGMTRD-DLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             CEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            999999998543223343 8999999999999999999874444555543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.99  E-value=3.5e-05  Score=60.05  Aligned_cols=76  Identities=16%  Similarity=0.231  Sum_probs=47.9

Q ss_pred             CCCeEEEecc----------------chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      ++++||||+|                ||-.|.+|++++..+|++|+.+.....               . ..+..+..+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~---------------~-~~p~~~~~i~   65 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS---------------L-PPPPGVKVIR   65 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------TTEEEEE
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc---------------c-cccccceEEE
Confidence            4678999887                499999999999999999999877641               1 1122455555


Q ss_pred             cCCCC--hhhHHHHHcCCCEEEEccccCCC
Q 025660           68 ADLSH--PDGFDAAIAGCTGVLHVATPVDF   95 (249)
Q Consensus        68 ~Dl~~--~~~~~~~~~~~d~vih~a~~~~~   95 (249)
                      ..-.+  .+.+.+.+++.|++||+||+.++
T Consensus        66 v~sa~em~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   66 VESAEEMLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             -SSHHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             ecchhhhhhhhccccCcceeEEEecchhhe
Confidence            43322  13455555678999999999877

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02602 lactate dehydrogenase

Probab=97.95  E-value=7.8e-05  Score=63.93  Aligned_cols=115  Identities=15%  Similarity=0.115  Sum_probs=73.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|.|+|+ |.+|+.++..|+.++.  ++.++++++.    ........+...........+ .++    .+++ .++++
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~----~~~g~a~DL~~~~~~~~~~~i-~~~----~dy~-~~~da  106 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPD----KLRGEMLDLQHAAAFLPRTKI-LAS----TDYA-VTAGS  106 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCc----hhhHHHHHHHhhhhcCCCCEE-EeC----CCHH-HhCCC
Confidence            59999995 9999999999998874  8999998761    000111112221111112222 211    1233 37899


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      |+||-+||.......+.. +.+..|+.-.+.+.+.+.+..+...++.+|
T Consensus       107 DiVVitAG~~~k~g~tR~-dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        107 DLCIVTAGARQIPGESRL-NLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             CEEEECCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999997543222333 889999999999999999887444555555

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.93  E-value=3.9e-05  Score=61.85  Aligned_cols=73  Identities=18%  Similarity=0.247  Sum_probs=59.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHH-HcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~   83 (249)
                      |+++|.| .|-+|..+++.|.++||+|+++++++        ++... +.+.    ...+.+.+|-++++.++++ ++++
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~--------~~~~~~~~~~----~~~~~v~gd~t~~~~L~~agi~~a   67 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDE--------ERVEEFLADE----LDTHVVIGDATDEDVLEEAGIDDA   67 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCH--------HHHHHHhhhh----cceEEEEecCCCHHHHHhcCCCcC
Confidence            4788888 78899999999999999999999998        55444 2211    1468899999999999999 7889


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |+++-+-+
T Consensus        68 D~vva~t~   75 (225)
T COG0569          68 DAVVAATG   75 (225)
T ss_pred             CEEEEeeC
Confidence            99885554

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.92  E-value=0.00018  Score=60.77  Aligned_cols=115  Identities=14%  Similarity=0.098  Sum_probs=74.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      ||.|+||+|.+|+.++..|..++.  +++++++++.     . .....|....   ....+....  +.+++.+.++++|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a-----~-g~a~DL~~~~---~~~~i~~~~--~~~~~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGA-----A-GVAADLSHIP---TAASVKGFS--GEEGLENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCC-----c-EEEchhhcCC---cCceEEEec--CCCchHHHcCCCC
Confidence            589999999999999999988874  7899988651     0 1111122111   111121101  1123556788999


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      +||-+||.......+.. +.+..|..-.+.+.+.+.+..+...++.+|-
T Consensus        70 ivvitaG~~~~~g~~R~-dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        70 VVVIPAGVPRKPGMTRD-DLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             EEEEeCCCCCCCCccHH-HHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            99999997544323333 8899999999999999998873344444443

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.90  E-value=6.3e-05  Score=62.15  Aligned_cols=115  Identities=15%  Similarity=0.026  Sum_probs=74.7

Q ss_pred             EEEeccchhhHHHHHHHHHHCC----CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHG----YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      |.|+||+|.+|..++..|+..|    .+++++++++.    +.......++.........+     ++-.+++.+.++++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~----~l~~~~~dl~~~~~~~~~~~-----i~~~~d~~~~~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEE----KLKGVAMDLQDAVEPLADIK-----VSITDDPYEAFKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcc----cchHHHHHHHHhhhhccCcE-----EEECCchHHHhCCC
Confidence            5799998999999999999988    79999998761    00011111222211100111     11122345668899


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      |+||-+++.......... .....|+...+.+++.+.+..+...++..|
T Consensus        72 DiVv~t~~~~~~~g~~r~-~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          72 DVVIITAGVGRKPGMGRL-DLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CEEEECCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999987554322333 678889999999999999887444555554

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.90  E-value=0.00053  Score=58.01  Aligned_cols=109  Identities=17%  Similarity=0.179  Sum_probs=73.5

Q ss_pred             eEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhh----hhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +|.|+|+ |.+|..++..|..+|  .+|.+++++.        ++.+    .+...........+...   +   + +.+
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~--------~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l   65 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINK--------AKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADC   65 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCc--------hhhhhHHHHHHccccccCCeEEeeC---C---H-HHh
Confidence            6999996 999999999999999  6899999986        2222    12222111112222222   2   2 247


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      +++|+||.+++.......+.. .....|+.-.+.+.+.+.+..+...++..+
T Consensus        66 ~~aDiViita~~~~~~~~~r~-dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          66 KGADVVVITAGANQKPGETRL-DLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             CCCCEEEEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            899999999997543323344 778889999999999998887344555443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.89  E-value=6.2e-05  Score=65.31  Aligned_cols=100  Identities=17%  Similarity=0.223  Sum_probs=62.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHH-HHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA-AIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~   81 (249)
                      ++++|.|.||||++|..|++.|.++ .++++.+.++.        ..-+.+....     .+...+|+.+.++++. .++
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~--------saG~~i~~~~-----~~l~~~~~~~~~~~~~~~~~  103 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADR--------KAGQSFGSVF-----PHLITQDLPNLVAVKDADFS  103 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChh--------hcCCCchhhC-----ccccCccccceecCCHHHhc
Confidence            4569999999999999999999998 57999988764        1111111111     1122234433332222 247


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccce
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~  136 (249)
                      ++|+|+-+.+.                 ..+..++..+ +.+  .++|-+||..-
T Consensus       104 ~~DvVf~Alp~-----------------~~s~~i~~~~-~~g--~~VIDlSs~fR  138 (381)
T PLN02968        104 DVDAVFCCLPH-----------------GTTQEIIKAL-PKD--LKIVDLSADFR  138 (381)
T ss_pred             CCCEEEEcCCH-----------------HHHHHHHHHH-hCC--CEEEEcCchhc
Confidence            89999976652                 1344566665 334  58999998763

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.89  E-value=0.00035  Score=62.70  Aligned_cols=169  Identities=21%  Similarity=0.186  Sum_probs=106.0

Q ss_pred             CCeEEEeccc-hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCC----CCCCCeEEEEcCCCChhhHHHH
Q 025660            5 KGRVCVTGGT-GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP----GASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         5 ~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      .+.+|||||+ |.||.+++..|++.|..|+++.-+-      .+++.+..+.+.    ..+..+.++..++....+++.+
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~------s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRL------SEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccc------cHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            4678999987 8999999999999999999987654      223444433332    2345677788777666555555


Q ss_pred             Hc---------------------CCCEEEEccccCCC---C-CCChHHHhhhhHHhHHHHHHHHHHhcCC------cceE
Q 025660           80 IA---------------------GCTGVLHVATPVDF---E-DKEPEEVITQRAINGTLGILKSCLKSGT------VKRV  128 (249)
Q Consensus        80 ~~---------------------~~d~vih~a~~~~~---~-~~~~~~~~~~~n~~~t~~l~~~~~~~~~------~~~~  128 (249)
                      ++                     ..|.++-.|++.-.   . -....+..+++-+-..++|+-.+++.++      .-|+
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hV  549 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHV  549 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEE
Confidence            54                     13777777776322   1 1111124455555556677777765431      2366


Q ss_pred             EEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc----CCcEEEeecCeEeCCC
Q 025660          129 VYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH----GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       129 v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~vrp~~v~g~~  202 (249)
                      |.-.|-. .+-..+                      -..|+.||...+.++..+..++    .+.++..+.|++=|-+
T Consensus       550 VLPgSPN-rG~FGg----------------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTG  604 (866)
T COG4982         550 VLPGSPN-RGMFGG----------------------DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTG  604 (866)
T ss_pred             EecCCCC-CCccCC----------------------CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccc
Confidence            6666643 111111                      1369999999999888775554    2666777777776654

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.89  E-value=0.00012  Score=61.88  Aligned_cols=112  Identities=12%  Similarity=0.050  Sum_probs=71.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhh----hccCCC-CCCCeEEEEcCCCChhhHHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSF----LKNLPG-ASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~----l~~~~~-~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |++|.|+|| |.+|+.++..+...|. +|+++++++        ++.+.    +..... ......     ++...+++ 
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~--------~~~~~~~~dl~~~~~~~~~~~~-----i~~~~d~~-   66 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVE--------GVPQGKALDIAEAAPVEGFDTK-----ITGTNDYE-   66 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCC--------chhHHHHHHHHhhhhhcCCCcE-----EEeCCCHH-
Confidence            368999997 9999999999998875 999999976        22211    111111 001111     11112233 


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      .++++|+||.+++.......+. .+.+..|+.-.+.+++.+.+..+...+|..|
T Consensus        67 ~~~~aDiVii~~~~p~~~~~~r-~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         67 DIAGSDVVVITAGVPRKPGMSR-DDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             HHCCCCEEEECCCCCCCcCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            4689999999998644322222 3677889988889999888876344455554

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.88  E-value=0.00013  Score=62.08  Aligned_cols=118  Identities=17%  Similarity=0.154  Sum_probs=74.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +.++|.|+|| |.+|+.++..|...| .+++++++++....  . ...+ +..... ......+ .    ...+++ .++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~--g-~~lD-l~~~~~~~~~~~~i-~----~~~d~~-~l~   72 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQ--G-KALD-LKHFSTLVGSNINI-L----GTNNYE-DIK   72 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccch--h-HHHH-HhhhccccCCCeEE-E----eCCCHH-HhC
Confidence            4568999996 999999999999888 68999999762100  0 0000 111111 0111111 1    112344 568


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ++|+||.+++.......+. .+.+..|..-.+.+++.+.+..+...++.+|-
T Consensus        73 ~ADiVVitag~~~~~g~~r-~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         73 DSDVVVITAGVQRKEEMTR-EDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999999998754322233 37888899888889998888873444565543

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.80  E-value=8.3e-05  Score=55.03  Aligned_cols=75  Identities=17%  Similarity=0.156  Sum_probs=53.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCe-EEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++++++|.|| |..|++++..|.+.|.+ |+++.|+.        ++.+.+.+.. ....+..+..     +++.+.+++
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~--------~ra~~l~~~~-~~~~~~~~~~-----~~~~~~~~~   75 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTP--------ERAEALAEEF-GGVNIEAIPL-----EDLEEALQE   75 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSH--------HHHHHHHHHH-TGCSEEEEEG-----GGHCHHHHT
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCH--------HHHHHHHHHc-CccccceeeH-----HHHHHHHhh
Confidence            5689999996 77999999999999975 99999987        6666654332 1123333333     334467889


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      +|+||++.+..
T Consensus        76 ~DivI~aT~~~   86 (135)
T PF01488_consen   76 ADIVINATPSG   86 (135)
T ss_dssp             ESEEEE-SSTT
T ss_pred             CCeEEEecCCC
Confidence            99999987753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.78  E-value=8.4e-05  Score=66.18  Aligned_cols=73  Identities=21%  Similarity=0.220  Sum_probs=59.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d   84 (249)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++        ++.+.+.+.    ..+.++.+|.++.+.+.++ ++++|
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~--------~~~~~~~~~----~~~~~~~gd~~~~~~l~~~~~~~a~   67 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDE--------ERLRRLQDR----LDVRTVVGNGSSPDVLREAGAEDAD   67 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCH--------HHHHHHHhh----cCEEEEEeCCCCHHHHHHcCCCcCC
Confidence            37999996 9999999999999999999999987        555554431    1478899999999999888 78899


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      .||-+..
T Consensus        68 ~vi~~~~   74 (453)
T PRK09496         68 LLIAVTD   74 (453)
T ss_pred             EEEEecC
Confidence            8886653

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.77  E-value=0.00016  Score=61.14  Aligned_cols=116  Identities=16%  Similarity=0.128  Sum_probs=74.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+||.|+|+ |.+|+.++..|+..|  .+++++++++.    ........+...........+...     .+++ .+++
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~----~~~g~a~Dl~~~~~~~~~~~v~~~-----~dy~-~~~~   71 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVED----KLKGEAMDLQHGSAFLKNPKIEAD-----KDYS-VTAN   71 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc----HHHHHHHHHHHhhccCCCCEEEEC-----CCHH-HhCC
Confidence            358999996 999999999998887  48999998761    000111112221111111122221     1233 3689


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      +|+||-+||.......+. .+.+..|..-.+.+.+.+.+..+...++.+|
T Consensus        72 adivvitaG~~~k~g~~R-~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          72 SKVVIVTAGARQNEGESR-LDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             CCEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            999999999755422233 3789999999999999999987444555555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.76  E-value=0.00033  Score=58.72  Aligned_cols=174  Identities=14%  Similarity=-0.012  Sum_probs=99.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|.|+|| |.||+.++-.|+.++  .++.++++.......    ....|.........-..+.+| .+    .+.++++
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G----~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~a   70 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEG----VALDLSHAAAPLGSDVKITGD-GD----YEDLKGA   70 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccc----hhcchhhcchhccCceEEecC-CC----hhhhcCC
Confidence            47999999 999999999998876  489999998510000    011111111111111122232 11    3456799


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+|+-+||...-...+. .+.+..|..-...+.+.+.+.. ..-++.+-|.-+-.-.    ...-+.++        .+.
T Consensus        71 DiVvitAG~prKpGmtR-~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtNPvD~~t----y~~~k~sg--------~p~  136 (313)
T COG0039          71 DIVVITAGVPRKPGMTR-LDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTNPVDILT----YIAMKFSG--------FPK  136 (313)
T ss_pred             CEEEEeCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHHhhC-CCeEEEEecCcHHHHH----HHHHHhcC--------CCc
Confidence            99999998755432233 3899999999999999999988 4566666554331000    00000000        001


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCC
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~  203 (249)
                      .+..-..+..-.-++...+++..+++...++...+-.+++
T Consensus       137 ~rvig~gt~LDsaR~~~~lae~~~v~~~~V~~~ViGeHGd  176 (313)
T COG0039         137 NRVIGSGTVLDSARFRTFLAEKLGVSPKDVHAYVIGEHGD  176 (313)
T ss_pred             cceecccchHHHHHHHHHHHHHhCCChhHceeeEeccCCC
Confidence            1112223334445555566666788777777666555544

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.76  E-value=0.0013  Score=55.88  Aligned_cols=119  Identities=13%  Similarity=0.086  Sum_probs=74.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE-cCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH-ADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~   81 (249)
                      ++++|.|+| +|.+|+.++..++..|. +|+++++++.-.   .....+.............+.. .|      + +.++
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~---~~~~ld~~~~~~~~~~~~~I~~~~d------~-~~l~   73 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIP---QGKALDISHSNVIAGSNSKVIGTNN------Y-EDIA   73 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchh---hHHHHHHHhhhhccCCCeEEEECCC------H-HHhC
Confidence            446899999 59999999999999895 899999987210   0001111111111111222321 22      3 2568


Q ss_pred             CCCEEEEccccCCCCCC----ChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           82 GCTGVLHVATPVDFEDK----EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~----~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ++|+||.+++.......    ......+..|..-.+.+++.+.+..+...++..|-
T Consensus        74 ~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         74 GSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             CCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999999987543111    02236788899888889999988873345666553

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.75  E-value=4.9e-05  Score=63.25  Aligned_cols=79  Identities=20%  Similarity=0.254  Sum_probs=62.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      ...++|-||+||.|..++++|..+|.+-.+..|+.        .++..+.....  ....  ..++.++..+++.++..+
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~--------~kl~~l~~~LG--~~~~--~~p~~~p~~~~~~~~~~~   73 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSS--------AKLDALRASLG--PEAA--VFPLGVPAALEAMASRTQ   73 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCH--------HHHHHHHHhcC--cccc--ccCCCCHHHHHHHHhcce
Confidence            35699999999999999999999999888888988        77776644322  1222  334444899999999999


Q ss_pred             EEEEccccCCC
Q 025660           85 GVLHVATPVDF   95 (249)
Q Consensus        85 ~vih~a~~~~~   95 (249)
                      +|+||+|++..
T Consensus        74 VVlncvGPyt~   84 (382)
T COG3268          74 VVLNCVGPYTR   84 (382)
T ss_pred             EEEeccccccc
Confidence            99999998754

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.74  E-value=0.00068  Score=48.49  Aligned_cols=70  Identities=20%  Similarity=0.312  Sum_probs=54.5

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCCCEE
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCTGV   86 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~v   86 (249)
                      |+|.| .|-+|..+++.|.+.+++|+++++++        +..+.+.+.     .+.++.+|.++++.+.++ +++++.|
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~--------~~~~~~~~~-----~~~~i~gd~~~~~~l~~a~i~~a~~v   66 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDP--------ERVEELREE-----GVEVIYGDATDPEVLERAGIEKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSH--------HHHHHHHHT-----TSEEEES-TTSHHHHHHTTGGCESEE
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCc--------HHHHHHHhc-----ccccccccchhhhHHhhcCccccCEE
Confidence            57888 46799999999999777999999998        565655544     368999999999998886 4578887


Q ss_pred             EEccc
Q 025660           87 LHVAT   91 (249)
Q Consensus        87 ih~a~   91 (249)
                      +-+..
T Consensus        67 v~~~~   71 (116)
T PF02254_consen   67 VILTD   71 (116)
T ss_dssp             EEESS
T ss_pred             EEccC
Confidence            75444

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.71  E-value=0.00037  Score=58.85  Aligned_cols=116  Identities=14%  Similarity=0.097  Sum_probs=71.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|.|+|+ |.+|..++..|+..|+ +|+++++.+        +..+ ...++.... ........++-..++++ ++++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~--------~l~~g~a~d~~~~~-~~~~~~~~i~~t~d~~~-~~~a   70 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVE--------GIPQGKALDMYEAS-PVGGFDTKVTGTNNYAD-TANS   70 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCC--------ChhHHHHHhhhhhh-hccCCCcEEEecCCHHH-hCCC
Confidence            47999995 9999999999999886 899999865        2111 100010000 00000111211123444 5789


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      |+||-++|.......+.. ..+..|..-.+.+++.+.+..+...+|.+|-
T Consensus        71 DiVIitag~p~~~~~sR~-~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        71 DIVVITAGLPRKPGMSRE-DLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CEEEEcCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999996433222333 6888999999999999888763445555553

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.69  E-value=0.00051  Score=49.74  Aligned_cols=97  Identities=20%  Similarity=0.318  Sum_probs=54.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCe-EEEEcCCCChhhHHHHHcCCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL-RIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      ||.|+||||++|+.|++.|.+.. .+++.+..+..       +.-..+.......... .....+ .+.+.    ++++|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~D   68 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR-------SAGKPLSEVFPHPKGFEDLSVED-ADPEE----LSDVD   68 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT-------TTTSBHHHTTGGGTTTEEEBEEE-TSGHH----HTTES
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc-------ccCCeeehhccccccccceeEee-cchhH----hhcCC
Confidence            68999999999999999999964 47666555541       1222222221110111 121222 33332    37899


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      +|+.|...                 ..+..+.+.+.+.+ . ++|=+|+.
T Consensus        69 vvf~a~~~-----------------~~~~~~~~~~~~~g-~-~ViD~s~~   99 (121)
T PF01118_consen   69 VVFLALPH-----------------GASKELAPKLLKAG-I-KVIDLSGD   99 (121)
T ss_dssp             EEEE-SCH-----------------HHHHHHHHHHHHTT-S-EEEESSST
T ss_pred             EEEecCch-----------------hHHHHHHHHHhhCC-c-EEEeCCHH
Confidence            99988652                 12234555566666 3 66666664

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.69  E-value=0.00093  Score=58.90  Aligned_cols=169  Identities=13%  Similarity=0.019  Sum_probs=99.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC-------CC--eEEEEEcCCCCcccCCchhhhhh-ccCC----CCCCCeEEEEcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH-------GY--SVTTTVRSELDPEHRNSKDLSFL-KNLP----GASERLRIFHADLS   71 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~l-~~~~----~~~~~~~~~~~Dl~   71 (249)
                      -+|.|+|++|.+|.+++-.|+..       +.  +++.++++.        ++.+.. .++.    ....++.+..+   
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~--------~~a~G~amDL~daa~~~~~~v~i~~~---  169 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSK--------QALEGVAMELEDSLYPLLREVSIGID---  169 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCc--------chhHHHHHHHHHhhhhhcCceEEecC---
Confidence            47999999999999999999988       64  788888877        333221 1111    11112221111   


Q ss_pred             ChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHh-cCCcceEEEEcccceeeccCCCccccCCC
Q 025660           72 HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK-SGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        72 ~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~-~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                      +    .+.++++|+||-+||.......+.. +.++.|..-.+.+.+.+.+ .++...+|.+|--.-....    ...+..
T Consensus       170 ~----ye~~kdaDiVVitAG~prkpG~tR~-dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~----v~~k~s  240 (444)
T PLN00112        170 P----YEVFQDAEWALLIGAKPRGPGMERA-DLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNAL----ICLKNA  240 (444)
T ss_pred             C----HHHhCcCCEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHH----HHHHHc
Confidence            2    3456799999999997543223333 8999999999999999999 5634455555532100000    000000


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCC
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~  203 (249)
                       +        ..+.+..=..+..-.-++...+++..+++...|+-+.|.|...
T Consensus       241 -g--------~~~~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHG  284 (444)
T PLN00112        241 -P--------NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHS  284 (444)
T ss_pred             -C--------CCCcceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCC
Confidence             0        0001121222233334444556666688888888878888643

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.68  E-value=0.00029  Score=68.01  Aligned_cols=77  Identities=16%  Similarity=0.060  Sum_probs=59.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-Ce-------------EEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YS-------------VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD   69 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~D   69 (249)
                      .+++|+|.|| |++|+..++.|.+.. .+             |++.+++.        +..+.+.+..   .++..+..|
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~--------~~a~~la~~~---~~~~~v~lD  635 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYL--------KDAKETVEGI---ENAEAVQLD  635 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCH--------HHHHHHHHhc---CCCceEEee
Confidence            4679999995 999999999998763 34             77777766        4444443321   246778999


Q ss_pred             CCChhhHHHHHcCCCEEEEcccc
Q 025660           70 LSHPDGFDAAIAGCTGVLHVATP   92 (249)
Q Consensus        70 l~~~~~~~~~~~~~d~vih~a~~   92 (249)
                      +.|.+++.++++++|+||.+...
T Consensus       636 v~D~e~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        636 VSDSESLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             cCCHHHHHHhhcCCCEEEECCCc
Confidence            99999999999999999998865

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.68  E-value=0.0017  Score=54.82  Aligned_cols=114  Identities=16%  Similarity=0.107  Sum_probs=75.6

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCC-C-CCCeEEEEcCCCChhhHHHHHcC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPG-A-SERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ||.|+|+ |.+|+.++..|+.++.  ++++++..+.    ........|..... . ..+..+..+|       .+.+++
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~----~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~   68 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEG----VAEGEALDFHHATALTYSTNTKIRAGD-------YDDCAD   68 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc----hhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCC
Confidence            5889997 9999999999998874  8999998761    01111112222111 1 1234444433       346779


Q ss_pred             CCEEEEccccCCCC-CCC-hHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           83 CTGVLHVATPVDFE-DKE-PEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        83 ~d~vih~a~~~~~~-~~~-~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      +|+||-+||..... +.. .. +.+..|..-.+.+.+.+.+.+ ...++.+-|.
T Consensus        69 aDivvitaG~~~kpg~tr~R~-dll~~N~~I~~~i~~~i~~~~-p~~i~ivvsN  120 (307)
T cd05290          69 ADIIVITAGPSIDPGNTDDRL-DLAQTNAKIIREIMGNITKVT-KEAVIILITN  120 (307)
T ss_pred             CCEEEECCCCCCCCCCCchHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEecC
Confidence            99999999975432 221 24 889999999999999999988 4555555553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.63  E-value=0.00052  Score=58.72  Aligned_cols=69  Identities=17%  Similarity=0.169  Sum_probs=44.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++|+|.||||++|+.|++.|.+++|   ++..+.++.        ..-+.+. .    ........|+.+.     .+++
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~--------~~g~~l~-~----~g~~i~v~d~~~~-----~~~~   63 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR--------SAGKELS-F----KGKELKVEDLTTF-----DFSG   63 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc--------cCCCeee-e----CCceeEEeeCCHH-----HHcC
Confidence            5899999999999999999999876   457776654        1111111 1    1123344455432     2357


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||-+++.
T Consensus        64 vDvVf~A~g~   73 (334)
T PRK14874         64 VDIALFSAGG   73 (334)
T ss_pred             CCEEEECCCh
Confidence            8999977653

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.62  E-value=0.012  Score=44.41  Aligned_cols=164  Identities=17%  Similarity=0.158  Sum_probs=93.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh-------HHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-------FDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-------~~~   78 (249)
                      .+|+|-|+-|-+|+++++.|-.++|-|.-++..+.                .+. ..-.++.+|-.=.|+       +.+
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eN----------------e~A-d~sI~V~~~~swtEQe~~v~~~vg~   66 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSEN----------------EQA-DSSILVDGNKSWTEQEQSVLEQVGS   66 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccc----------------ccc-cceEEecCCcchhHHHHHHHHHHHH
Confidence            58999999999999999999999999888777651                000 111233333221222       222


Q ss_pred             HHc--CCCEEEEccccCCC-CC--CCh---HHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccce-eeccCCCccccCC
Q 025660           79 AIA--GCTGVLHVATPVDF-ED--KEP---EEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA-VFYNDKDVDMMDE  149 (249)
Q Consensus        79 ~~~--~~d~vih~a~~~~~-~~--~~~---~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~-~~~~~~~~~~~~e  149 (249)
                      .++  ++|.|+..||-... +.  .+.   .+-+++-.+-...--...+.++-..+-++-+..+.. ..+.++       
T Consensus        67 sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPg-------  139 (236)
T KOG4022|consen   67 SLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPG-------  139 (236)
T ss_pred             hhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCc-------
Confidence            232  47999988875433 11  111   112333333222222222222211344444444332 222211       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-CC----cEEEeecCeEeCCCCCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GL----DLVTLIPSMVVGPFICPKFA  208 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~----~~~~vrp~~v~g~~~~~~~~  208 (249)
                                     .-.|+..|.+..++.+.++.+. |+    -...|.|-....|+.+..+|
T Consensus       140 ---------------MIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP  188 (236)
T KOG4022|consen  140 ---------------MIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMP  188 (236)
T ss_pred             ---------------ccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCC
Confidence                           3369999999999999987653 44    46677888888888776543

>PRK04148 hypothetical protein; Provisional

Probab=97.59  E-value=0.00027  Score=51.81  Aligned_cols=95  Identities=21%  Similarity=0.227  Sum_probs=66.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      ++++++.| +| -|.+++..|.+.|++|++++.++        ...+..++.     .++.+.+|+.+++  .++-+++|
T Consensus        17 ~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~--------~aV~~a~~~-----~~~~v~dDlf~p~--~~~y~~a~   79 (134)
T PRK04148         17 NKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINE--------KAVEKAKKL-----GLNAFVDDLFNPN--LEIYKNAK   79 (134)
T ss_pred             CCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHh-----CCeEEECcCCCCC--HHHHhcCC
Confidence            46899998 66 88899999999999999999998        444444333     4689999999987  33456788


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      .|+-+=-+                .+....+++.+++.+ ..-+|.--|
T Consensus        80 liysirpp----------------~el~~~~~~la~~~~-~~~~i~~l~  111 (134)
T PRK04148         80 LIYSIRPP----------------RDLQPFILELAKKIN-VPLIIKPLS  111 (134)
T ss_pred             EEEEeCCC----------------HHHHHHHHHHHHHcC-CCEEEEcCC
Confidence            87732211                223346777888877 444444333

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.56  E-value=0.0015  Score=55.88  Aligned_cols=85  Identities=11%  Similarity=0.175  Sum_probs=56.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-----------------ccCCchhhhhhccCCCCCCCeEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-----------------EHRNSKDLSFLKNLPGASERLRI   65 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~~~~~~~~l~~~~~~~~~~~~   65 (249)
                      +.++|+|+| +|.+|+++++.|...|. +++++|++.-+.                 ..+.....+.+.++.. ..+++.
T Consensus        23 ~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp-~v~i~~  100 (338)
T PRK12475         23 REKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS-EVEIVP  100 (338)
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC-CcEEEE
Confidence            346899999 56699999999999997 889898874110                 0011111223333322 235666


Q ss_pred             EEcCCCChhhHHHHHcCCCEEEEccc
Q 025660           66 FHADLSHPDGFDAAIAGCTGVLHVAT   91 (249)
Q Consensus        66 ~~~Dl~~~~~~~~~~~~~d~vih~a~   91 (249)
                      +..|++ ++.+.++++++|+||.+..
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D  125 (338)
T PRK12475        101 VVTDVT-VEELEELVKEVDLIIDATD  125 (338)
T ss_pred             EeccCC-HHHHHHHhcCCCEEEEcCC
Confidence            777875 4567888999999997653

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.54  E-value=0.0027  Score=46.84  Aligned_cols=110  Identities=13%  Similarity=0.185  Sum_probs=68.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCC-------cccC----Cchhhhh----hccCCCCCCCeEEEEc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELD-------PEHR----NSKDLSF----LKNLPGASERLRIFHA   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------~~~~----~~~~~~~----l~~~~~~~~~~~~~~~   68 (249)
                      .++|+|.| .|.+|+.+++.|...|. +++++|.+.-.       ....    +..+.+.    +.+.. +..++..+..
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n-p~~~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN-PDVEVEAIPE   79 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS-TTSEEEEEES
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc-Cceeeeeeec
Confidence            46899999 67799999999999997 78888874310       0000    1111111    12221 1235666667


Q ss_pred             CCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      ++ +.+...++++++|+||.+...                ......+.+.|++.+  ..+|+.++..
T Consensus        80 ~~-~~~~~~~~~~~~d~vi~~~d~----------------~~~~~~l~~~~~~~~--~p~i~~~~~g  127 (135)
T PF00899_consen   80 KI-DEENIEELLKDYDIVIDCVDS----------------LAARLLLNEICREYG--IPFIDAGVNG  127 (135)
T ss_dssp             HC-SHHHHHHHHHTSSEEEEESSS----------------HHHHHHHHHHHHHTT---EEEEEEEET
T ss_pred             cc-ccccccccccCCCEEEEecCC----------------HHHHHHHHHHHHHcC--CCEEEEEeec
Confidence            77 556678888899999987542                222335666788877  4777777643

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.50  E-value=0.0028  Score=53.40  Aligned_cols=109  Identities=14%  Similarity=0.088  Sum_probs=72.7

Q ss_pred             EEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            8 VCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      |.|.|+ |.+|+.++-.|+..|  +++++++++.        ++.+.    +...........+..+  .+    .+.++
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~--------~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~   65 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNE--------EKAKGDALDLSHASAFLATGTIVRG--GD----YADAA   65 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCc--------cHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhC
Confidence            468885 789999999999988  6899999976        33222    2222211112222221  11    23678


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      ++|+||.++|.......+.. .....|+.-.+.+.+.+++..+...++.+|
T Consensus        66 ~aDiVIitag~p~~~~~~R~-~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          66 DADIVVITAGAPRKPGETRL-DLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCEEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99999999997543222333 788899999999999999887444555555

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.44  E-value=0.0029  Score=54.22  Aligned_cols=113  Identities=13%  Similarity=0.175  Sum_probs=70.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------c----------cCCchhhhhhccCCCCCCCeEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------E----------HRNSKDLSFLKNLPGASERLRI   65 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~----------~~~~~~~~~l~~~~~~~~~~~~   65 (249)
                      +..+|+|.|+ |++|+.+++.|...|. ++++++++.-+.       .          .+.....+.+.++.+ ..+++.
T Consensus        23 ~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp-~v~v~~  100 (339)
T PRK07688         23 REKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS-DVRVEA  100 (339)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC-CcEEEE
Confidence            3468999995 8899999999999997 899999863110       0          011111122333221 234566


Q ss_pred             EEcCCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccccee
Q 025660           66 FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAV  137 (249)
Q Consensus        66 ~~~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~  137 (249)
                      +..+++ ++.+.+++++.|+||.+...       +         ..-..+.+.|.+.+  ..+|+.++...+
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~Dn-------~---------~~r~~ln~~~~~~~--iP~i~~~~~g~~  153 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATDN-------F---------ETRFIVNDAAQKYG--IPWIYGACVGSY  153 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCCC-------H---------HHHHHHHHHHHHhC--CCEEEEeeeeee
Confidence            667775 45577788899999977431       1         11224556777776  467777765533

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.42  E-value=0.001  Score=57.13  Aligned_cols=35  Identities=20%  Similarity=0.368  Sum_probs=29.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~   39 (249)
                      |++|+|+||||++|+.+++.|.+. +++++++.++.
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~   37 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRS   37 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcc
Confidence            469999999999999999999987 57887766643

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.41  E-value=0.0033  Score=46.84  Aligned_cols=108  Identities=17%  Similarity=0.201  Sum_probs=65.2

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------cc----CCchhh----hhhccCCCCCCCeEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------EH----RNSKDL----SFLKNLPGASERLRIFHADL   70 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~~----~~~~~~----~~l~~~~~~~~~~~~~~~Dl   70 (249)
                      +|+|.| .|.+|+++++.|...|. ++++++.+.-+.       ..    -...+.    +.++++. +..+++.+..++
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~-p~v~i~~~~~~~   78 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN-PGVNVTAVPEGI   78 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHC-CCcEEEEEeeec
Confidence            589999 58899999999999997 788887652100       00    011111    1222222 123455555555


Q ss_pred             CChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           71 SHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        71 ~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      .+.. ..+.++++|+||.+...                ......+.+.|++.+  ..++..++..
T Consensus        79 ~~~~-~~~~~~~~diVi~~~d~----------------~~~~~~l~~~~~~~~--i~~i~~~~~g  124 (143)
T cd01483          79 SEDN-LDDFLDGVDLVIDAIDN----------------IAVRRALNRACKELG--IPVIDAGGLG  124 (143)
T ss_pred             Chhh-HHHHhcCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEcCCC
Confidence            5433 36677889999976653                222345667787776  5777777754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.41  E-value=0.0027  Score=50.32  Aligned_cols=111  Identities=14%  Similarity=0.191  Sum_probs=66.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcc---------------cCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE---------------HRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---------------~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      +.++|+|.| .|.+|+++++.|...|. ++++++.+.-+.+               .+.....+.+.++.+ ..+++.+.
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~i~~~~   97 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS-DIQVTALK   97 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC-CCEEEEeh
Confidence            346899999 77899999999999996 8999988631000               000111112222221 22344444


Q ss_pred             cCCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      ..+. .+.+.++++++|+||.+...                ...-..+.+.|++.+  ..+|+.++..
T Consensus        98 ~~i~-~~~~~~~~~~~D~Vi~~~d~----------------~~~r~~l~~~~~~~~--ip~i~~~~~g  146 (202)
T TIGR02356        98 ERVT-AENLELLINNVDLVLDCTDN----------------FATRYLINDACVALG--TPLISAAVVG  146 (202)
T ss_pred             hcCC-HHHHHHHHhCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEEecc
Confidence            4453 35677788899999977542                111123556677776  4677766543

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.41  E-value=0.00039  Score=57.96  Aligned_cols=73  Identities=25%  Similarity=0.336  Sum_probs=50.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++++|+|+ |.+|++++..|.+.| .+|++++|+.        ++.+.+.+.......+.+   ++    +..+.+.+
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~--------~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~  185 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTV--------ERAEELAKLFGALGKAEL---DL----ELQEELAD  185 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHHhhhccceee---cc----cchhcccc
Confidence            4578999996 899999999999999 7999999987        555554332111011111   11    22345678


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||++...
T Consensus       186 ~DivInaTp~  195 (278)
T PRK00258        186 FDLIINATSA  195 (278)
T ss_pred             CCEEEECCcC
Confidence            9999998764

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.39  E-value=0.0036  Score=49.41  Aligned_cols=112  Identities=16%  Similarity=0.198  Sum_probs=67.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcc-------cC------Cchh----hhhhccCCCCCCCeEEE
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE-------HR------NSKD----LSFLKNLPGASERLRIF   66 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~~------~~~~----~~~l~~~~~~~~~~~~~   66 (249)
                      ..+|+|.|++| +|+++++.|+..|. ++++++.+.-+..       ..      ...+    .+.++++.+ ..+++.+
T Consensus        19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp-~v~i~~~   96 (198)
T cd01485          19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP-NVKLSIV   96 (198)
T ss_pred             hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC-CCEEEEE
Confidence            46899999666 99999999999995 7888887631100       00      0001    112333322 2345556


Q ss_pred             EcCCCC-hhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccce
Q 025660           67 HADLSH-PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (249)
Q Consensus        67 ~~Dl~~-~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~  136 (249)
                      ..++.+ .+...+.++++|+||.+-..                ......+-+.|++.+  ..+|+.++...
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~----------------~~~~~~ln~~c~~~~--ip~i~~~~~G~  149 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEEN----------------YERTAKVNDVCRKHH--IPFISCATYGL  149 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEEeecC
Confidence            666653 45566778889999955321                112223556777776  57888877553

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.38  E-value=0.00099  Score=58.76  Aligned_cols=172  Identities=14%  Similarity=0.081  Sum_probs=99.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC---C----CeEEEEEcCCCCcccCCchhhhh----hccCC-CCCCCeEEEEcCCCCh
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH---G----YSVTTTVRSELDPEHRNSKDLSF----LKNLP-GASERLRIFHADLSHP   73 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~---g----~~V~~~~r~~~~~~~~~~~~~~~----l~~~~-~~~~~~~~~~~Dl~~~   73 (249)
                      -+|+||||+|.||.+|+-.+..-   |    ..+++++...      ..++.+.    ++... .....+.+..      
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~------~~~~l~G~amDL~D~a~pll~~v~i~~------  191 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPE------NLEKLKGLVMEVEDLAFPLLRGISVTT------  191 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCC------chhhHHHHHHHHHHhHHhhcCCcEEEE------
Confidence            47999999999999999998762   3    2355566531      0122221    11111 1111222221      


Q ss_pred             hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCC-cceEEEEcccceeeccCCCccccCCCCC
Q 025660           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (249)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (249)
                       ...+.++++|+||-+||.......+. .+.+..|..-.+...+.+.+..+ ..+++.+.|.-+-.-.   ....+.. |
T Consensus       192 -~~~ea~~daDvvIitag~prk~G~~R-~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t---~i~~k~a-p  265 (452)
T cd05295         192 -DLDVAFKDAHVIVLLDDFLIKEGEDL-EGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKT---SILIKYA-P  265 (452)
T ss_pred             -CCHHHhCCCCEEEECCCCCCCcCCCH-HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHH---HHHHHHc-C
Confidence             12456789999999999754422333 48999999999999999988762 2567666653320000   0000000 0


Q ss_pred             CchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCC
Q 025660          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~  203 (249)
                             . -++.+..|.+....-++...+++..+++...|+-..|.|...
T Consensus       266 -------g-iP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG  308 (452)
T cd05295         266 -------S-IPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIG  308 (452)
T ss_pred             -------C-CCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccC
Confidence                   0 001233444555555666667777788888888878877643

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.38  E-value=0.00043  Score=58.54  Aligned_cols=33  Identities=21%  Similarity=0.279  Sum_probs=31.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++|.|+| .|.+|..++..|.+.|++|++++|++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~   35 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP   35 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence            4799999 99999999999999999999999987

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.36  E-value=0.0025  Score=55.37  Aligned_cols=168  Identities=13%  Similarity=0.010  Sum_probs=92.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-e----EEE--E--EcCCCCcccCCchhhhhh----ccCC-CCCCCeEEEEcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-S----VTT--T--VRSELDPEHRNSKDLSFL----KNLP-GASERLRIFHADLS   71 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~----V~~--~--~r~~~~~~~~~~~~~~~l----~~~~-~~~~~~~~~~~Dl~   71 (249)
                      -+|.|+||+|.+|.+++-.|+..+. .    |.+  +  +++.        ++.+..    .... ....++.+..+   
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~--------~~a~g~a~DL~d~a~~~~~~v~i~~~---  113 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSK--------EALEGVAMELEDSLYPLLREVSIGID---  113 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccc--------hhhhHHHHHHHHhhhhhcCceEEecC---
Confidence            4899999999999999999998873 2    333  3  5554        222221    1111 11112221111   


Q ss_pred             ChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCC
Q 025660           72 HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        72 ~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                      +    .+.++++|+||-+||.......+. .+.+..|+.-.+.+.+.+.+.. +...+|.+|--.-....    ...+..
T Consensus       114 ~----y~~~kdaDIVVitAG~prkpg~tR-~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~----v~~k~s  184 (387)
T TIGR01757       114 P----YEVFEDADWALLIGAKPRGPGMER-ADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNAL----IAMKNA  184 (387)
T ss_pred             C----HHHhCCCCEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHH----HHHHHc
Confidence            1    345779999999999754322333 3899999999999999999843 23445555531100000    000000


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                       +        .++.+..=..+..-.-++...+++..+++...|+-++|.|..
T Consensus       185 -g--------~~~~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeH  227 (387)
T TIGR01757       185 -P--------NIPRKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNH  227 (387)
T ss_pred             -C--------CCcccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecC
Confidence             0        000111112233334455555666567877777767777754

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.36  E-value=0.00051  Score=65.78  Aligned_cols=162  Identities=15%  Similarity=0.193  Sum_probs=108.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCe-EEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      .+..+|+||-|+.|..|++.|+.+|.+ ++..+|+.        -+...    +..-...+-.+.+-.-|++..+.-.++
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsG--------irtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~L 1839 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSG--------IRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGL 1839 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEecccc--------chhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHH
Confidence            468999999999999999999999985 55566665        12111    111112233555666788888877788


Q ss_pred             HcC------CCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccc
Q 025660           80 IAG------CTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        80 ~~~------~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      ++.      +-.|+|+|+....      +..++ ++.-+.-..||.+|=+.-++. .-.+.||.+||...=.+..+    
T Consensus      1840 i~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knF-k~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~G---- 1914 (2376)
T KOG1202|consen 1840 IEESNKLGPVGGIFNLAAVLRDGLIENQTPKNF-KDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAG---- 1914 (2376)
T ss_pred             HHHhhhcccccchhhHHHHHHhhhhcccChhHH-HhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCc----
Confidence            774      5789999987544      11222 244455567888887777765 22579999999764222212    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeE
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMV  198 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v  198 (249)
                                        ...||.+....|+++.+- +..|++-+.|.-|-|
T Consensus      1915 ------------------QtNYG~aNS~MERiceqR-r~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1915 ------------------QTNYGLANSAMERICEQR-RHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             ------------------ccccchhhHHHHHHHHHh-hhcCCCcceeeeecc
Confidence                              456999999999999873 446887777765543

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.36  E-value=0.00066  Score=53.36  Aligned_cols=33  Identities=30%  Similarity=0.331  Sum_probs=28.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |++.|.| +|.||++|+++|.+.||+|++-.|+.
T Consensus         2 ~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~   34 (211)
T COG2085           2 MIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRG   34 (211)
T ss_pred             cEEEEec-cChHHHHHHHHHHhCCCeEEEecCCC
Confidence            4566655 99999999999999999999987765

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.32  E-value=0.0019  Score=57.46  Aligned_cols=80  Identities=11%  Similarity=-0.021  Sum_probs=52.1

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++++++|||++| +|.++++.|.+.|++|++.+++..+    .....+.+.+.     .+.+..+.-.  ..   ++
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~----~~~~~~~l~~~-----g~~~~~~~~~--~~---~~   65 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFS----ENPEAQELLEE-----GIKVICGSHP--LE---LL   65 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCcc----chhHHHHHHhc-----CCEEEeCCCC--HH---Hh
Confidence            666678999999988 9999999999999999999876510    00111222221     2344433211  11   23


Q ss_pred             c-CCCEEEEccccCCC
Q 025660           81 A-GCTGVLHVATPVDF   95 (249)
Q Consensus        81 ~-~~d~vih~a~~~~~   95 (249)
                      . .+|.||.++|+...
T Consensus        66 ~~~~d~vV~s~gi~~~   81 (447)
T PRK02472         66 DEDFDLMVKNPGIPYT   81 (447)
T ss_pred             cCcCCEEEECCCCCCC
Confidence            3 48999999987543

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.32  E-value=0.0015  Score=55.90  Aligned_cols=30  Identities=23%  Similarity=0.370  Sum_probs=25.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCe
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYS   31 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~   31 (249)
                      |+ +|.+|.|+||||++|..|++.|.+++|.
T Consensus         1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~hP   30 (336)
T PRK05671          1 MS-QPLDIAVVGATGTVGEALVQILEERDFP   30 (336)
T ss_pred             CC-CCCEEEEEccCCHHHHHHHHHHhhCCCC
Confidence            54 4579999999999999999999987763

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.31  E-value=0.0012  Score=55.69  Aligned_cols=109  Identities=12%  Similarity=0.044  Sum_probs=68.4

Q ss_pred             EEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhh----hhccCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLS----FLKNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~----~l~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      |.|+|| |.+|..++..|..+|. +|+++++++        +..+    .+..... ......+.. . +|   ++ .++
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e--------~~~~g~~~dl~~~~~~~~~~~~I~~-t-~d---~~-~l~   65 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVE--------GLPQGKALDISQAAPILGSDTKVTG-T-ND---YE-DIA   65 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCC--------cHHHHHHHHHHHhhhhcCCCeEEEE-c-CC---HH-HhC
Confidence            468997 9999999999998876 999999986        2211    1111111 111112211 0 11   33 368


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      ++|+||.+++.......+.. ..+..|+.-.+.+++.+.+..+...+|.+|
T Consensus        66 dADiVIit~g~p~~~~~~r~-e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          66 GSDVVVITAGIPRKPGMSRD-DLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             CCCEEEEecCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999999986443222222 577788888888999888876334444444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.30  E-value=0.0006  Score=51.41  Aligned_cols=75  Identities=13%  Similarity=0.075  Sum_probs=50.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      +.++++|+|+ |.+|+.+++.|.+.| ++|++++|+.        ++.+.+.+...    ...+..+..+   ..+++++
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~--------~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~   81 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTL--------EKAKALAERFG----ELGIAIAYLD---LEELLAE   81 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH--------HHHHHHHHHHh----hcccceeecc---hhhcccc
Confidence            3578999996 899999999999996 7899999987        44443322111    0001122333   3344788


Q ss_pred             CCEEEEccccCC
Q 025660           83 CTGVLHVATPVD   94 (249)
Q Consensus        83 ~d~vih~a~~~~   94 (249)
                      +|+||++.....
T Consensus        82 ~Dvvi~~~~~~~   93 (155)
T cd01065          82 ADLIINTTPVGM   93 (155)
T ss_pred             CCEEEeCcCCCC
Confidence            999999987643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.29  E-value=0.00072  Score=61.96  Aligned_cols=70  Identities=17%  Similarity=0.207  Sum_probs=57.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d   84 (249)
                      .+++|.| .|-+|+.++++|.++|++|++++.++        ++.+.+++.     ....+.+|.+|++.++++ ++++|
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~--------~~~~~~~~~-----g~~~i~GD~~~~~~L~~a~i~~a~  483 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSR--------TRVDELRER-----GIRAVLGNAANEEIMQLAHLDCAR  483 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHC-----CCeEEEcCCCCHHHHHhcCccccC
Confidence            5789998 78899999999999999999999988        666666543     578999999999988765 45788


Q ss_pred             EEEEc
Q 025660           85 GVLHV   89 (249)
Q Consensus        85 ~vih~   89 (249)
                      .++-+
T Consensus       484 ~viv~  488 (558)
T PRK10669        484 WLLLT  488 (558)
T ss_pred             EEEEE
Confidence            76633

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.28  E-value=0.0014  Score=52.55  Aligned_cols=34  Identities=29%  Similarity=0.375  Sum_probs=31.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|.|+||+|.+|++++..|.+.|++|++.+|++
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~   34 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL   34 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence            3799999999999999999999999999999987

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.28  E-value=0.0012  Score=58.81  Aligned_cols=74  Identities=23%  Similarity=0.318  Sum_probs=58.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~   83 (249)
                      +++++|.|+ |.+|+.+++.|.+.|++|+++++++        ++.+.+.+..   ....++.+|.++++.+.++ ++++
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~--------~~~~~~~~~~---~~~~~i~gd~~~~~~L~~~~~~~a  298 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDP--------ERAEELAEEL---PNTLVLHGDGTDQELLEEEGIDEA  298 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH--------HHHHHHHHHC---CCCeEEECCCCCHHHHHhcCCccC
Confidence            578999995 9999999999999999999999988        5555544321   2467899999999988655 4578


Q ss_pred             CEEEEcc
Q 025660           84 TGVLHVA   90 (249)
Q Consensus        84 d~vih~a   90 (249)
                      |.||-+.
T Consensus       299 ~~vi~~~  305 (453)
T PRK09496        299 DAFIALT  305 (453)
T ss_pred             CEEEECC
Confidence            8887433

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.24  E-value=0.0017  Score=55.79  Aligned_cols=99  Identities=17%  Similarity=0.178  Sum_probs=55.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC-CCeEEEE-EcCCCCcccCCchhhhhhccCCCCCCCeEEE-EcCCCChhhHHHHHcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIF-HADLSHPDGFDAAIAG   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~   82 (249)
                      ++|.|+||||++|..+++.|.+. +.+++.+ +++.        ..-+.+.+...   .+... ..++.+. +..++.++
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~--------sagk~~~~~~~---~l~~~~~~~~~~~-~~~~~~~~   68 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRE--------SAGKPVSEVHP---HLRGLVDLNLEPI-DEEEIAED   68 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccch--------hcCCChHHhCc---cccccCCceeecC-CHHHhhcC
Confidence            37999999999999999999977 5688744 4332        11111111111   01111 1112211 22344457


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      +|+|+-|..-.                 ....++..+.+.+  .++|=.|+..
T Consensus        69 ~DvVf~alP~~-----------------~s~~~~~~~~~~G--~~VIDlS~~f  102 (346)
T TIGR01850        69 ADVVFLALPHG-----------------VSAELAPELLAAG--VKVIDLSADF  102 (346)
T ss_pred             CCEEEECCCch-----------------HHHHHHHHHHhCC--CEEEeCChhh
Confidence            99998766521                 2235555555555  5888888865

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.23  E-value=0.0059  Score=49.34  Aligned_cols=111  Identities=20%  Similarity=0.206  Sum_probs=65.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------cc----CCchh----hhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------EH----RNSKD----LSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~~----~~~~~----~~~l~~~~~~~~~~~~~~   67 (249)
                      +.++|+|.| +|.+|+++++.|...|. +++++|.+.-+.       ..    -...+    .+.+.++.+ ..+++.+.
T Consensus        20 ~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~i~~~~   97 (228)
T cd00757          20 KNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP-DVEIEAYN   97 (228)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC-CCEEEEec
Confidence            346899999 77799999999999996 777776542100       00    00111    112222211 12455555


Q ss_pred             cCCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      .++ +.+.+.++++++|+||.+...       +         ..-..+-+.|++.+  ..+|+.+...
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d~-------~---------~~r~~l~~~~~~~~--ip~i~~g~~g  146 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTDN-------F---------ATRYLINDACVKLG--KPLVSGAVLG  146 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCCC-------H---------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            555 346677888899999977552       1         11124556777766  4677765543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.22  E-value=0.00045  Score=52.78  Aligned_cols=66  Identities=21%  Similarity=0.177  Sum_probs=46.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      |++|.++| .|-.|+.+++.|.+.|++|++.+|+.        ++.+.+.+..            ..-.++..++++++|
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~--------~~~~~~~~~g------------~~~~~s~~e~~~~~d   59 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSP--------EKAEALAEAG------------AEVADSPAEAAEQAD   59 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSH--------HHHHHHHHTT------------EEEESSHHHHHHHBS
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccch--------hhhhhhHHhh------------hhhhhhhhhHhhccc
Confidence            45899998 79999999999999999999999987        6666654431            222245566677777


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      +|+-+-.
T Consensus        60 vvi~~v~   66 (163)
T PF03446_consen   60 VVILCVP   66 (163)
T ss_dssp             EEEE-SS
T ss_pred             ceEeecc
Confidence            7775543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.21  E-value=0.0029  Score=58.45  Aligned_cols=72  Identities=14%  Similarity=0.237  Sum_probs=59.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~   83 (249)
                      .++|+|.| .|-+|+.+++.|.++|++++++++++        ++.+.+.+.     +...+.||.++++.++++ ++++
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~--------~~v~~~~~~-----g~~v~~GDat~~~~L~~agi~~A  465 (601)
T PRK03659        400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDI--------SAVNLMRKY-----GYKVYYGDATQLELLRAAGAEKA  465 (601)
T ss_pred             cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCH--------HHHHHHHhC-----CCeEEEeeCCCHHHHHhcCCccC
Confidence            35799998 78899999999999999999999998        666666543     467899999999988876 5678


Q ss_pred             CEEEEcc
Q 025660           84 TGVLHVA   90 (249)
Q Consensus        84 d~vih~a   90 (249)
                      |.+|-+-
T Consensus       466 ~~vv~~~  472 (601)
T PRK03659        466 EAIVITC  472 (601)
T ss_pred             CEEEEEe
Confidence            8877443

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.19  E-value=0.0011  Score=54.92  Aligned_cols=73  Identities=15%  Similarity=0.176  Sum_probs=48.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++++|+|+ |.+|++++..|.+.|++|++++|+.        ++.+.+.+...........  ++.+     ....++|
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~--------~~~~~la~~~~~~~~~~~~--~~~~-----~~~~~~D  180 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTV--------SKAEELAERFQRYGEIQAF--SMDE-----LPLHRVD  180 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHhhcCceEEe--chhh-----hcccCcc
Confidence            578999997 7899999999999999999999987        4444443221111112222  1111     1234689


Q ss_pred             EEEEccccC
Q 025660           85 GVLHVATPV   93 (249)
Q Consensus        85 ~vih~a~~~   93 (249)
                      +||++....
T Consensus       181 ivInatp~g  189 (270)
T TIGR00507       181 LIINATSAG  189 (270)
T ss_pred             EEEECCCCC
Confidence            999998763

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=97.18  E-value=0.0098  Score=50.10  Aligned_cols=110  Identities=14%  Similarity=0.106  Sum_probs=70.5

Q ss_pred             EeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCC-CCCCeEEEEcCCCChhhHHHHHcCCCEE
Q 025660           10 VTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAAIAGCTGV   86 (249)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   86 (249)
                      |+| .|.+|+.++..|+..+.  ++.+++++..    ........+..... ......+..   .+    .+.++++|+|
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~----~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDiv   68 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKD----KAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLV   68 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCC----hhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEE
Confidence            466 59999999999988874  7999998761    01111111222211 112233322   22    2467799999


Q ss_pred             EEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           87 LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        87 ih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      |-+||.......+. ...+..|..-.+.+.+.+.+.++...++.+|
T Consensus        69 Vitag~~rk~g~~R-~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        69 VITAGAPQKPGETR-LELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             EECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            99999754322233 3889999999999999999887444555555

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.18  E-value=0.012  Score=48.16  Aligned_cols=73  Identities=21%  Similarity=0.246  Sum_probs=56.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      +++|||.|||+ =|+.|++.|.+.|+.|++..-...        ..      . ......++.+-+.+.+++.++++  +
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~--------g~------~-~~~~~~v~~G~l~~~~~l~~~l~~~~   65 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRT--------GG------P-ADLPGPVRVGGFGGAEGLAAYLREEG   65 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCC--------CC------c-ccCCceEEECCCCCHHHHHHHHHHCC
Confidence            45899999998 899999999999998887666541        11      1 11256788899989999999997  6


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      ++.||+..-++
T Consensus        66 i~~VIDATHPf   76 (248)
T PRK08057         66 IDLVIDATHPY   76 (248)
T ss_pred             CCEEEECCCcc
Confidence            99999887653

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.14  E-value=0.0025  Score=49.77  Aligned_cols=78  Identities=19%  Similarity=0.222  Sum_probs=43.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeE-E----E-EcCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLR-I----F-HADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~-~----~-~~Dl~~~~~~~   77 (249)
                      |+|.|.| .|++|.-++..|.+.||+|++++.++        ++.+.+.+-...  ...+. .    . .+.++-..++.
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~--------~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~   71 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDE--------EKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIE   71 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-H--------HHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCCh--------HHHHHHhhccccccccchhhhhccccccccchhhhhhh
Confidence            4799997 99999999999999999999999988        666666433111  00000 0    0 01122223445


Q ss_pred             HHHcCCCEEEEcccc
Q 025660           78 AAIAGCTGVLHVATP   92 (249)
Q Consensus        78 ~~~~~~d~vih~a~~   92 (249)
                      +.++++|+++-|...
T Consensus        72 ~ai~~adv~~I~VpT   86 (185)
T PF03721_consen   72 EAIKDADVVFICVPT   86 (185)
T ss_dssp             HHHHH-SEEEE----
T ss_pred             hhhhccceEEEecCC
Confidence            556678998888764

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.14  E-value=0.0033  Score=53.87  Aligned_cols=68  Identities=12%  Similarity=0.149  Sum_probs=42.2

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEE---EEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVT---TTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +|+|.||||++|+.|++.|.+++|.+.   .+.+..        ..-+.+. .    ........|+. .    ..++++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~--------~~g~~~~-~----~~~~~~~~~~~-~----~~~~~~   62 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR--------SAGRKVT-F----KGKELEVNEAK-I----ESFEGI   62 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc--------cCCCeee-e----CCeeEEEEeCC-h----HHhcCC
Confidence            589999999999999999999888643   333443        1111111 1    11234455553 1    224678


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|+-+++.
T Consensus        63 D~v~~a~g~   71 (339)
T TIGR01296        63 DIALFSAGG   71 (339)
T ss_pred             CEEEECCCH
Confidence            888877764

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.13  E-value=0.0073  Score=49.74  Aligned_cols=67  Identities=21%  Similarity=0.253  Sum_probs=44.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC-CCeEEEEE-cCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTV-RSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|.|+|++|.+|+.+++.+.+. +.++.++. ++.        +.....            -..++...+++.++++++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~--------~~~~~~------------~~~~i~~~~dl~~ll~~~   61 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPG--------SPLVGQ------------GALGVAITDDLEAVLADA   61 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC--------cccccc------------CCCCccccCCHHHhccCC
Confidence            58999999999999999988865 67877754 443        111110            112333345566667788


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+||++..+
T Consensus        62 DvVid~t~p   70 (257)
T PRK00048         62 DVLIDFTTP   70 (257)
T ss_pred             CEEEECCCH
Confidence            999988753

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.13  E-value=0.0017  Score=54.31  Aligned_cols=69  Identities=19%  Similarity=0.136  Sum_probs=50.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++++|+|+ |.+|+.+++.|...|.+|++.+|+.        ++.....+.     ....     ...+.+.+.++++
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~--------~~~~~~~~~-----g~~~-----~~~~~l~~~l~~a  210 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSS--------ADLARITEM-----GLIP-----FPLNKLEEKVAEI  210 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHC-----CCee-----ecHHHHHHHhccC
Confidence            4579999995 7799999999999999999999987        333333222     1111     1235567788899


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |+||++..
T Consensus       211 DiVint~P  218 (287)
T TIGR02853       211 DIVINTIP  218 (287)
T ss_pred             CEEEECCC
Confidence            99999763

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.12  E-value=0.0076  Score=48.14  Aligned_cols=111  Identities=16%  Similarity=0.245  Sum_probs=64.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcc--------------cCCchhhhhhccCCCCCCCeEEEEc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE--------------HRNSKDLSFLKNLPGASERLRIFHA   68 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------~~~~~~~~~l~~~~~~~~~~~~~~~   68 (249)
                      +..+|+|.| .|.+|+.+++.|...|. +++++|.+.-+..              ++.....+.+.++.. ..+++.+..
T Consensus        27 ~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp-~v~v~~~~~  104 (212)
T PRK08644         27 KKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP-FVEIEAHNE  104 (212)
T ss_pred             hCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCC-CCEEEEEee
Confidence            346899999 67799999999999996 6888888621000              000001111222211 234555555


Q ss_pred             CCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNA  135 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~  135 (249)
                      .+++ +...++++++|+||.+..       ++         ..-..+.+.+.+. +  ..+|+.+...
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~D-------~~---------~~r~~l~~~~~~~~~--~p~I~~~~~~  153 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAFD-------NA---------ETKAMLVETVLEHPG--KKLVAASGMA  153 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECCC-------CH---------HHHHHHHHHHHHhCC--CCEEEeehhh
Confidence            5554 456677888999997732       11         1223455666666 5  4667665443

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.09  E-value=0.0026  Score=48.77  Aligned_cols=55  Identities=16%  Similarity=0.174  Sum_probs=45.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|+|+|+++.+|..+++.|.++|.+|+++.|+.                                  +++.+.+.++
T Consensus        43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------------------~~l~~~l~~a   88 (168)
T cd01080          43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------------------KNLKEHTKQA   88 (168)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------------------hhHHHHHhhC
Confidence            468999999877889999999999999988887753                                  3456678889


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+||.+.+.
T Consensus        89 DiVIsat~~   97 (168)
T cd01080          89 DIVIVAVGK   97 (168)
T ss_pred             CEEEEcCCC
Confidence            999988775

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.08  E-value=0.0025  Score=55.30  Aligned_cols=74  Identities=19%  Similarity=0.168  Sum_probs=55.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      ..+++|+|+ |-+|...++.|...|.+|++++|+.        ++.+.+.....     ..+..+..+++.+.+.+.++|
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~--------~~~~~l~~~~g-----~~v~~~~~~~~~l~~~l~~aD  232 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINI--------DRLRQLDAEFG-----GRIHTRYSNAYEIEDAVKRAD  232 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCH--------HHHHHHHHhcC-----ceeEeccCCHHHHHHHHccCC
Confidence            467999986 8899999999999999999999987        44444432211     123345567788888999999


Q ss_pred             EEEEcccc
Q 025660           85 GVLHVATP   92 (249)
Q Consensus        85 ~vih~a~~   92 (249)
                      +||+++..
T Consensus       233 vVI~a~~~  240 (370)
T TIGR00518       233 LLIGAVLI  240 (370)
T ss_pred             EEEEcccc
Confidence            99998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.07  E-value=0.0017  Score=54.34  Aligned_cols=38  Identities=24%  Similarity=0.252  Sum_probs=34.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+..+++|.|+| +|.+|..++..|+..|++|+++++++
T Consensus         1 ~~~~~~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~   38 (286)
T PRK07819          1 MSDAIQRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTE   38 (286)
T ss_pred             CCCCccEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCH
Confidence            666677999998 58999999999999999999999987

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.06  E-value=0.0092  Score=52.68  Aligned_cols=34  Identities=15%  Similarity=0.107  Sum_probs=31.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +++|.|+| .|++|..++..|.+.||+|+++++++
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~   36 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQ   36 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCH
Confidence            46899998 89999999999999999999999988

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.03  E-value=0.0069  Score=52.19  Aligned_cols=35  Identities=31%  Similarity=0.485  Sum_probs=29.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (249)
                      +.+|+|+||||++|+.|++.|.+... +++++.++.
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            47999999999999999999998754 888875554

>PRK08328 hypothetical protein; Provisional

Probab=97.03  E-value=0.014  Score=47.20  Aligned_cols=110  Identities=15%  Similarity=0.182  Sum_probs=64.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcc-------cCC----c-hh----hhhhccCCCCCCCeEEEE
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE-------HRN----S-KD----LSFLKNLPGASERLRIFH   67 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~~~----~-~~----~~~l~~~~~~~~~~~~~~   67 (249)
                      ..+|+|.| +|.+|+++++.|...|. +++++|.+.-+.+       ...    . .+    .+.+.+.. ....++.+.
T Consensus        27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~n-p~v~v~~~~  104 (231)
T PRK08328         27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFN-SDIKIETFV  104 (231)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhC-CCCEEEEEe
Confidence            46899998 67799999999999996 7888876531100       000    0 01    11122221 123455555


Q ss_pred             cCCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      ..+ +++...++++++|+||.+....                ..-..+-+.|++.+  ..+|+.++..
T Consensus       105 ~~~-~~~~~~~~l~~~D~Vid~~d~~----------------~~r~~l~~~~~~~~--ip~i~g~~~g  153 (231)
T PRK08328        105 GRL-SEENIDEVLKGVDVIVDCLDNF----------------ETRYLLDDYAHKKG--IPLVHGAVEG  153 (231)
T ss_pred             ccC-CHHHHHHHHhcCCEEEECCCCH----------------HHHHHHHHHHHHcC--CCEEEEeecc
Confidence            555 3455777888899999765421                11113445667766  5677766654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.01  E-value=0.013  Score=52.17  Aligned_cols=121  Identities=17%  Similarity=0.131  Sum_probs=72.3

Q ss_pred             EeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCEEEEc
Q 025660           10 VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHV   89 (249)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   89 (249)
                      |+||+|.+|.++++.|...|.+|+...+..        .+...     ....++.-+..|.+..+..+++.         
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~--------~~~~~-----~~~~~~~~~~~d~~~~~~~~~l~---------  100 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGG--------LTWAA-----GWGDRFGALVFDATGITDPADLK---------  100 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccc--------ccccc-----CcCCcccEEEEECCCCCCHHHHH---------
Confidence            888899999999999999999999876655        11110     01112332334444433222211         


Q ss_pred             cccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHH
Q 025660           90 ATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYA  169 (249)
Q Consensus        90 a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~  169 (249)
                                   ..    .......++.+.   +.++||+++|.....   .                      ...|+
T Consensus       101 -------------~~----~~~~~~~l~~l~---~~griv~i~s~~~~~---~----------------------~~~~~  135 (450)
T PRK08261        101 -------------AL----YEFFHPVLRSLA---PCGRVVVLGRPPEAA---A----------------------DPAAA  135 (450)
T ss_pred             -------------HH----HHHHHHHHHhcc---CCCEEEEEccccccC---C----------------------chHHH
Confidence                         00    112222233322   246999999865421   1                      12489


Q ss_pred             HHHHHHHHHHHHHHHHc--CCcEEEeecCe
Q 025660          170 ISKTLTERAALEFAEEH--GLDLVTLIPSM  197 (249)
Q Consensus       170 ~sK~~~e~~~~~~~~~~--~~~~~~vrp~~  197 (249)
                      .+|...+.+.+.++.+.  ++++..+.|+.
T Consensus       136 ~akaal~gl~rsla~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        136 AAQRALEGFTRSLGKELRRGATAQLVYVAP  165 (450)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEecCC
Confidence            99998888888877764  68888888764

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.01  E-value=0.0039  Score=53.56  Aligned_cols=76  Identities=21%  Similarity=0.156  Sum_probs=53.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      .++.|||.||+|.+|++.++-+...|...++..++.        +..+..+.+..      -...|..+++-.++..+  
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~--------e~~~l~k~lGA------d~vvdy~~~~~~e~~kk~~  222 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSK--------EKLELVKKLGA------DEVVDYKDENVVELIKKYT  222 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEccc--------chHHHHHHcCC------cEeecCCCHHHHHHHHhhc
Confidence            457899999999999999988877784445555554        45555555432      24567777655555544  


Q ss_pred             --CCCEEEEccccC
Q 025660           82 --GCTGVLHVATPV   93 (249)
Q Consensus        82 --~~d~vih~a~~~   93 (249)
                        ++|+|++|.|-.
T Consensus       223 ~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  223 GKGVDVVLDCVGGS  236 (347)
T ss_pred             CCCccEEEECCCCC
Confidence              489999999963

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.00  E-value=0.021  Score=45.09  Aligned_cols=110  Identities=17%  Similarity=0.188  Sum_probs=64.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcc-------cC----C----chhhhhhccCCCCCCCeEEEEc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE-------HR----N----SKDLSFLKNLPGASERLRIFHA   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~~----~----~~~~~~l~~~~~~~~~~~~~~~   68 (249)
                      .++|+|.|++| +|+++++.|...|. +++++|.+.-+..       ..    .    +...+.++++.+ ..+++.+..
T Consensus        21 ~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp-~v~i~~~~~   98 (197)
T cd01492          21 SARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNP-RVKVSVDTD   98 (197)
T ss_pred             hCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCC-CCEEEEEec
Confidence            46899999655 99999999999996 7888876531100       00    0    011122333322 234555555


Q ss_pred             CCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccce
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~  136 (249)
                      .+.  +...+.++++|+||.+...       .         ..-..+-+.|++.+  ..+|+.++..-
T Consensus        99 ~~~--~~~~~~~~~~dvVi~~~~~-------~---------~~~~~ln~~c~~~~--ip~i~~~~~G~  146 (197)
T cd01492          99 DIS--EKPEEFFSQFDVVVATELS-------R---------AELVKINELCRKLG--VKFYATGVHGL  146 (197)
T ss_pred             Ccc--ccHHHHHhCCCEEEECCCC-------H---------HHHHHHHHHHHHcC--CCEEEEEecCC
Confidence            555  2345567889999965331       1         11223446778777  46787777553

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.99  E-value=0.0033  Score=52.44  Aligned_cols=55  Identities=13%  Similarity=0.163  Sum_probs=44.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++++|.|++|.+|+.++..|.++|..|++..|+.                                  .++.+.++++
T Consensus       158 ~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------------------~~L~~~~~~a  203 (283)
T PRK14192        158 AGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------------------QNLPELVKQA  203 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------------------hhHHHHhccC
Confidence            568999999999999999999999999888876643                                  2344455789


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+||++.|.
T Consensus       204 DIvI~AtG~  212 (283)
T PRK14192        204 DIIVGAVGK  212 (283)
T ss_pred             CEEEEccCC
Confidence            999999863

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.96  E-value=0.0045  Score=52.09  Aligned_cols=68  Identities=21%  Similarity=0.205  Sum_probs=50.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++++|+|+ |.+|+.++..|...|.+|++.+|+.        ++.....+.     ...++     ..+.+.+.++++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~--------~~~~~~~~~-----G~~~~-----~~~~l~~~l~~a  211 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKS--------AHLARITEM-----GLSPF-----HLSELAEEVGKI  211 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHc-----CCeee-----cHHHHHHHhCCC
Confidence            4679999995 7799999999999999999999987        443333332     12222     234567778899


Q ss_pred             CEEEEcc
Q 025660           84 TGVLHVA   90 (249)
Q Consensus        84 d~vih~a   90 (249)
                      |+||++.
T Consensus       212 DiVI~t~  218 (296)
T PRK08306        212 DIIFNTI  218 (296)
T ss_pred             CEEEECC
Confidence            9999975

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.96  E-value=0.021  Score=46.51  Aligned_cols=109  Identities=15%  Similarity=0.122  Sum_probs=62.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCccc-----------CCchh----hhhhccCCCCCCCeEEEEc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEH-----------RNSKD----LSFLKNLPGASERLRIFHA   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------~~~~~----~~~l~~~~~~~~~~~~~~~   68 (249)
                      ..+|+|.| .|.+|+.+++.|...|. +++++|.+.-+..-           -...+    .+.+.++.+ ..+++.+..
T Consensus        24 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp-~v~i~~~~~  101 (240)
T TIGR02355        24 ASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINP-HIAINPINA  101 (240)
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCC-CcEEEEEec
Confidence            46899998 67799999999999995 78888876421100           00011    111222211 123444444


Q ss_pred             CCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      .++ .+.+.++++++|+||.+...                ...-..+-+.|.+.+  ..+|+-++.
T Consensus       102 ~i~-~~~~~~~~~~~DlVvd~~D~----------------~~~r~~ln~~~~~~~--ip~v~~~~~  148 (240)
T TIGR02355       102 KLD-DAELAALIAEHDIVVDCTDN----------------VEVRNQLNRQCFAAK--VPLVSGAAI  148 (240)
T ss_pred             cCC-HHHHHHHhhcCCEEEEcCCC----------------HHHHHHHHHHHHHcC--CCEEEEEec
Confidence            443 34567778888988866542                111234456777776  467765543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.95  E-value=0.0073  Score=51.26  Aligned_cols=74  Identities=18%  Similarity=0.195  Sum_probs=49.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH---H
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA---I   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~---~   80 (249)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++        ++.+.+.++..    -.++  |..+.+.+.+.   .
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~--------~~~~~~~~lGa----~~vi--~~~~~~~~~~~~~~~  203 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSD--------EKVAYLKKLGF----DVAF--NYKTVKSLEETLKKA  203 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcCC----CEEE--eccccccHHHHHHHh
Confidence            356899999999999999988888899999998877        56665554421    1222  22222222222   2


Q ss_pred             --cCCCEEEEccc
Q 025660           81 --AGCTGVLHVAT   91 (249)
Q Consensus        81 --~~~d~vih~a~   91 (249)
                        .++|+|+++.|
T Consensus       204 ~~~gvdvv~d~~G  216 (325)
T TIGR02825       204 SPDGYDCYFDNVG  216 (325)
T ss_pred             CCCCeEEEEECCC
Confidence              24899998876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.95  E-value=0.014  Score=45.16  Aligned_cols=80  Identities=13%  Similarity=0.235  Sum_probs=50.1

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------c-------cCCchhhhhhccCCCCCCCeEEEEcCCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------E-------HRNSKDLSFLKNLPGASERLRIFHADLS   71 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~-------~~~~~~~~~l~~~~~~~~~~~~~~~Dl~   71 (249)
                      +|+|.| +|.+|+.+++.|...|. +++++|.+.-+.       .       .+.+...+.++++.+ ..+++.+...+.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp-~v~i~~~~~~~~   78 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINP-FVKIEAINIKID   78 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCC-CCEEEEEEeecC
Confidence            589999 67799999999999997 699988864100       0       000111112222211 234555555554


Q ss_pred             ChhhHHHHHcCCCEEEEc
Q 025660           72 HPDGFDAAIAGCTGVLHV   89 (249)
Q Consensus        72 ~~~~~~~~~~~~d~vih~   89 (249)
                      . +.+.++++++|+||.+
T Consensus        79 ~-~~~~~~l~~~DlVi~~   95 (174)
T cd01487          79 E-NNLEGLFGDCDIVVEA   95 (174)
T ss_pred             h-hhHHHHhcCCCEEEEC
Confidence            4 5577788899999977

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.93  E-value=0.0024  Score=56.69  Aligned_cols=34  Identities=29%  Similarity=0.586  Sum_probs=31.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|.|+||+|.+|.++++.|.+.|++|++++|+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            3799999999999999999999999999999986

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.92  E-value=0.014  Score=50.39  Aligned_cols=111  Identities=14%  Similarity=0.070  Sum_probs=65.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------c--------cCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------E--------HRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~--------~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      +..+|+|.| +|.+|+.+++.|...|. ++++++.+.-+.       .        .+.....+.+.++.+ ..+++.+.
T Consensus        27 ~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np-~v~v~~~~  104 (355)
T PRK05597         27 FDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP-DVKVTVSV  104 (355)
T ss_pred             hCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC-CcEEEEEE
Confidence            346899998 57799999999999996 788887753100       0        001111122222222 23455565


Q ss_pred             cCCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      ..++. +...++++++|+||.+...       .         ..-..+-++|.+.+  ..+|+.++..
T Consensus       105 ~~i~~-~~~~~~~~~~DvVvd~~d~-------~---------~~r~~~n~~c~~~~--ip~v~~~~~g  153 (355)
T PRK05597        105 RRLTW-SNALDELRDADVILDGSDN-------F---------DTRHLASWAAARLG--IPHVWASILG  153 (355)
T ss_pred             eecCH-HHHHHHHhCCCEEEECCCC-------H---------HHHHHHHHHHHHcC--CCEEEEEEec
Confidence            66653 4566778899999977642       1         11112445667766  4577665433

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.89  E-value=0.011  Score=46.81  Aligned_cols=83  Identities=10%  Similarity=0.135  Sum_probs=51.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCC--ccc--------CCchhhh----hhccCCCCCCCeEEEEc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELD--PEH--------RNSKDLS----FLKNLPGASERLRIFHA   68 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~~--------~~~~~~~----~l~~~~~~~~~~~~~~~   68 (249)
                      +.++|+|.|+ |.+|+.+++.|...|. +++++|++.-+  -..        -...+.+    .+.++.+ ..+++.+..
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp-~~~i~~~~~   97 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINP-YTEIEAYDE   97 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCC-CCEEEEeee
Confidence            3468999995 6799999999999998 79999887100  000        0001111    1122211 124555556


Q ss_pred             CCCChhhHHHHHcCCCEEEEc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHV   89 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~   89 (249)
                      +++ .+.+.++++++|+||-+
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEEC
Confidence            665 45677788889999976

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.88  E-value=0.0029  Score=55.05  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=32.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +++|.|+||.|.+|..+++.|.+.|++|++++|+.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            47899999999999999999999999999999864

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.87  E-value=0.018  Score=49.41  Aligned_cols=28  Identities=25%  Similarity=0.386  Sum_probs=25.1

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCC
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGY   30 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~   30 (249)
                      .+.++|.|.||||++|..|++.|.+++|
T Consensus         5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~h   32 (344)
T PLN02383          5 ENGPSVAIVGVTGAVGQEFLSVLTDRDF   32 (344)
T ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC
Confidence            3567899999999999999999998877

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.86  E-value=0.0034  Score=48.72  Aligned_cols=69  Identities=20%  Similarity=0.049  Sum_probs=48.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|.|.| .|-||+++++.|..-|.+|++.+|..        .........             .....+++++++.+
T Consensus        35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~--------~~~~~~~~~-------------~~~~~~l~ell~~a   92 (178)
T PF02826_consen   35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSP--------KPEEGADEF-------------GVEYVSLDELLAQA   92 (178)
T ss_dssp             TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSC--------HHHHHHHHT-------------TEEESSHHHHHHH-
T ss_pred             CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccC--------Chhhhcccc-------------cceeeehhhhcchh
Confidence            468999998 79999999999999999999999998        222211111             01224677888899


Q ss_pred             CEEEEccccCC
Q 025660           84 TGVLHVATPVD   94 (249)
Q Consensus        84 d~vih~a~~~~   94 (249)
                      |+|+.+....+
T Consensus        93 Div~~~~plt~  103 (178)
T PF02826_consen   93 DIVSLHLPLTP  103 (178)
T ss_dssp             SEEEE-SSSST
T ss_pred             hhhhhhhcccc
Confidence            99888877543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.85  E-value=0.023  Score=46.45  Aligned_cols=109  Identities=20%  Similarity=0.193  Sum_probs=64.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcc-------c----CCchh----hhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE-------H----RNSKD----LSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~----~~~~~----~~~l~~~~~~~~~~~~~~   67 (249)
                      +.++|+|.|+ |.+|+.+++.|...|. ++++++.+.-+.+       +    -...+    .+.+.++.+ ..+++.+.
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp-~v~i~~~~  108 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINP-HIAIETIN  108 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCC-CCEEEEEe
Confidence            3468999996 8899999999999995 7888876531100       0    00011    112222221 23455555


Q ss_pred             cCCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ..++ ++...++++++|+||.+...       +         ..-..+-+.|++.+  ..+|+.++
T Consensus       109 ~~i~-~~~~~~~~~~~DiVi~~~D~-------~---------~~r~~ln~~~~~~~--ip~v~~~~  155 (245)
T PRK05690        109 ARLD-DDELAALIAGHDLVLDCTDN-------V---------ATRNQLNRACFAAK--KPLVSGAA  155 (245)
T ss_pred             ccCC-HHHHHHHHhcCCEEEecCCC-------H---------HHHHHHHHHHHHhC--CEEEEeee
Confidence            5554 45577788899999977542       1         11124556677766  45666544

>PRK06849 hypothetical protein; Provisional

Probab=96.85  E-value=0.0061  Score=53.29  Aligned_cols=36  Identities=22%  Similarity=0.112  Sum_probs=33.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++|+|||||++..+|..+++.|.+.|++|++++.++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            567999999999999999999999999999998876

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.85  E-value=0.0057  Score=53.17  Aligned_cols=67  Identities=15%  Similarity=0.202  Sum_probs=52.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      |++|+|.|+ |.+|+.++..+.+.|++|++++.++.       .....+        .-..+.+|..|.+.+.++++.+|
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~-------~pa~~~--------ad~~~~~~~~D~~~l~~~a~~~d   65 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPD-------SPAAQV--------ADEVIVADYDDVAALRELAEQCD   65 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCC-------CchhHh--------CceEEecCCCCHHHHHHHHhcCC
Confidence            468999995 79999999999999999999988761       111111        12456789999999999999998


Q ss_pred             EEE
Q 025660           85 GVL   87 (249)
Q Consensus        85 ~vi   87 (249)
                      +|.
T Consensus        66 vit   68 (372)
T PRK06019         66 VIT   68 (372)
T ss_pred             EEE
Confidence            865

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.84  E-value=0.0099  Score=49.69  Aligned_cols=75  Identities=20%  Similarity=0.218  Sum_probs=55.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .++.+.|+|+.| +|+--++..-+-|++|++++++..       ++.+.++.+     ..+.+..-..|++.++++.+..
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~-------kkeea~~~L-----GAd~fv~~~~d~d~~~~~~~~~  247 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSK-------KKEEAIKSL-----GADVFVDSTEDPDIMKAIMKTT  247 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCch-------hHHHHHHhc-----CcceeEEecCCHHHHHHHHHhh
Confidence            467999999999 999888877777999999999862       344455555     2344544455888888888777


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |.++|+.-
T Consensus       248 dg~~~~v~  255 (360)
T KOG0023|consen  248 DGGIDTVS  255 (360)
T ss_pred             cCcceeee
Confidence            77777665

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.83  E-value=0.004  Score=49.27  Aligned_cols=35  Identities=26%  Similarity=0.251  Sum_probs=31.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .+|+++|+|. |.+|+++++.|.+.|++|++.+++.
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            4579999996 6899999999999999999998876

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.81  E-value=0.021  Score=49.78  Aligned_cols=109  Identities=18%  Similarity=0.223  Sum_probs=64.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc---------------ccCCchhhhhhccCCCCCCCeEEEEc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP---------------EHRNSKDLSFLKNLPGASERLRIFHA   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---------------~~~~~~~~~~l~~~~~~~~~~~~~~~   68 (249)
                      .++|+|.| +|.+|+++++.|...|. ++++++++.-+.               ..+.+...+.+.++.+ ..+++.+..
T Consensus       135 ~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v~~~~~  212 (376)
T PRK08762        135 EARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP-DVQVEAVQE  212 (376)
T ss_pred             cCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC-CCEEEEEec
Confidence            46899998 57799999999999997 788888862100               0011111222222221 123444444


Q ss_pred             CCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      .+. .+.+.++++++|+||++...       +.         .-..+-+.|++.+  ..+|+.+..
T Consensus       213 ~~~-~~~~~~~~~~~D~Vv~~~d~-------~~---------~r~~ln~~~~~~~--ip~i~~~~~  259 (376)
T PRK08762        213 RVT-SDNVEALLQDVDVVVDGADN-------FP---------TRYLLNDACVKLG--KPLVYGAVF  259 (376)
T ss_pred             cCC-hHHHHHHHhCCCEEEECCCC-------HH---------HHHHHHHHHHHcC--CCEEEEEec
Confidence            444 35677788899999977652       11         1112456677776  467776543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.81  E-value=0.0039  Score=57.82  Aligned_cols=72  Identities=19%  Similarity=0.301  Sum_probs=58.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~   83 (249)
                      .++|+|.| .|-+|+.+++.|.++|+++++++.++        ++.+.+.+.     +...+.||.++++-++++ ++++
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~--------~~v~~~~~~-----g~~v~~GDat~~~~L~~agi~~A  465 (621)
T PRK03562        400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDP--------DHIETLRKF-----GMKVFYGDATRMDLLESAGAAKA  465 (621)
T ss_pred             cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCH--------HHHHHHHhc-----CCeEEEEeCCCHHHHHhcCCCcC
Confidence            36799998 78899999999999999999999998        666666543     467899999999987754 4568


Q ss_pred             CEEEEcc
Q 025660           84 TGVLHVA   90 (249)
Q Consensus        84 d~vih~a   90 (249)
                      +.+|-+-
T Consensus       466 ~~vvv~~  472 (621)
T PRK03562        466 EVLINAI  472 (621)
T ss_pred             CEEEEEe
Confidence            8877443

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.80  E-value=0.032  Score=47.14  Aligned_cols=109  Identities=17%  Similarity=0.242  Sum_probs=64.5

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------ccC----Cchh----hhhhccCCCCCCCeEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------EHR----NSKD----LSFLKNLPGASERLRIFHADL   70 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~~~----~~~~----~~~l~~~~~~~~~~~~~~~Dl   70 (249)
                      +|||.| .|.+|.++++.|...|. +++++|.+.-+.       ..+    +..+    .+.+.++. ...+++.+..++
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lN-p~v~V~~~~~~i   78 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFN-PNVKIVAYHANI   78 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHC-CCCeEEEEeccC
Confidence            589999 47799999999999996 788887643110       000    0011    11222222 123566677777


Q ss_pred             CChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           71 SHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        71 ~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      .+.+.-.+.++++|+||.+...                ...-..+-+.|+..+  ..+|..++.+
T Consensus        79 ~~~~~~~~f~~~~DvVv~a~Dn----------------~~ar~~in~~c~~~~--ip~I~~gt~G  125 (312)
T cd01489          79 KDPDFNVEFFKQFDLVFNALDN----------------LAARRHVNKMCLAAD--VPLIESGTTG  125 (312)
T ss_pred             CCccchHHHHhcCCEEEECCCC----------------HHHHHHHHHHHHHCC--CCEEEEecCc
Confidence            7754445677889998865432                222234445666665  4677766554

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.80  E-value=0.0031  Score=53.28  Aligned_cols=35  Identities=17%  Similarity=0.165  Sum_probs=28.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRS   38 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (249)
                      +|++|.|.||+|+.|..|++.|..+.+ ++...+.+
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~   36 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSR   36 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeech
Confidence            356899999999999999999998854 76555443

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.79  E-value=0.018  Score=46.55  Aligned_cols=111  Identities=15%  Similarity=0.208  Sum_probs=63.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCccc-----------CCchh----hhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEH-----------RNSKD----LSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------~~~~~----~~~l~~~~~~~~~~~~~~   67 (249)
                      +..+|+|.| .|.+|+++++.|...|. +++++|.+.-+.+-           -...+    .+.+.++.+ ..+++.+.
T Consensus        10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP-~~~V~~~~   87 (231)
T cd00755          10 RNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINP-ECEVDAVE   87 (231)
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCC-CcEEEEee
Confidence            346899998 77799999999999996 88888765311000           00011    111222221 22344444


Q ss_pred             cCCCChhhHHHHHc-CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           68 ADLSHPDGFDAAIA-GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      ..++ ++...+++. ++|+||.+...                ...-..|.+.|++.+  ..+|...+..
T Consensus        88 ~~i~-~~~~~~l~~~~~D~VvdaiD~----------------~~~k~~L~~~c~~~~--ip~I~s~g~g  137 (231)
T cd00755          88 EFLT-PDNSEDLLGGDPDFVVDAIDS----------------IRAKVALIAYCRKRK--IPVISSMGAG  137 (231)
T ss_pred             eecC-HhHHHHHhcCCCCEEEEcCCC----------------HHHHHHHHHHHHHhC--CCEEEEeCCc
Confidence            4444 345566664 58998876542                122235667888876  4666655533

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.77  E-value=0.0072  Score=52.88  Aligned_cols=71  Identities=17%  Similarity=0.142  Sum_probs=52.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      .+|+|+|+| +|..|..+++.+.+.|++|++++.++.        .....  .     .-..+..|..|.+.+.++++  
T Consensus        11 ~~~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~~~~--------~~~~~--~-----ad~~~~~~~~d~~~l~~~~~~~   74 (395)
T PRK09288         11 SATRVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYAN--------APAMQ--V-----AHRSHVIDMLDGDALRAVIERE   74 (395)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC--------CchHH--h-----hhheEECCCCCHHHHHHHHHHh
Confidence            456899998 568999999999999999999988761        10000  0     11356778889999988887  


Q ss_pred             CCCEEEEcc
Q 025660           82 GCTGVLHVA   90 (249)
Q Consensus        82 ~~d~vih~a   90 (249)
                      ++|.|+-..
T Consensus        75 ~id~vi~~~   83 (395)
T PRK09288         75 KPDYIVPEI   83 (395)
T ss_pred             CCCEEEEee
Confidence            788887543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.77  E-value=0.014  Score=49.74  Aligned_cols=74  Identities=16%  Similarity=0.144  Sum_probs=49.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCCCCCCeEEEEcCCCCh----hhHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHP----DGFDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~----~~~~~   78 (249)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.        ++.+.+.+ +..    -+++  |..+.    +.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~--------~~~~~~~~~lGa----~~vi--~~~~~~~~~~~i~~  216 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSD--------EKVDLLKNKLGF----DDAF--NYKEEPDLDAALKR  216 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHhcCC----ceeE--EcCCcccHHHHHHH
Confidence            356899999999999999988888899999988877        55555544 311    1222  22221    22222


Q ss_pred             HH-cCCCEEEEccc
Q 025660           79 AI-AGCTGVLHVAT   91 (249)
Q Consensus        79 ~~-~~~d~vih~a~   91 (249)
                      +. .++|+|+++.|
T Consensus       217 ~~~~gvd~v~d~~g  230 (338)
T cd08295         217 YFPNGIDIYFDNVG  230 (338)
T ss_pred             hCCCCcEEEEECCC
Confidence            22 25899998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.76  E-value=0.0099  Score=52.41  Aligned_cols=77  Identities=18%  Similarity=0.251  Sum_probs=49.5

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeE-----EE-EcCCCChhhHHH
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLR-----IF-HADLSHPDGFDA   78 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~-----~~-~~Dl~~~~~~~~   78 (249)
                      +|.|+| .|++|..++..|.+.||+|++++++.        ++.+.+..-...  ...+.     .+ .+-++-..+..+
T Consensus         2 kI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~--------~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~   72 (411)
T TIGR03026         2 KIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQ--------EKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYED   72 (411)
T ss_pred             EEEEEC-CCchhHHHHHHHHhcCCeEEEEECCH--------HHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHH
Confidence            699998 89999999999999999999999987        555544321100  00000     00 011211234556


Q ss_pred             HHcCCCEEEEcccc
Q 025660           79 AIAGCTGVLHVATP   92 (249)
Q Consensus        79 ~~~~~d~vih~a~~   92 (249)
                      +++++|+||-+...
T Consensus        73 ~~~~advvii~vpt   86 (411)
T TIGR03026        73 AIRDADVIIICVPT   86 (411)
T ss_pred             HHhhCCEEEEEeCC
Confidence            67889999887764

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.76  E-value=0.0056  Score=51.82  Aligned_cols=36  Identities=19%  Similarity=0.132  Sum_probs=32.5

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +++|+|.|.| +|.+|+++++.|.+.||+|++++|+.
T Consensus         2 ~~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          2 TQPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            3567899998 79999999999999999999999986

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.75  E-value=0.023  Score=47.99  Aligned_cols=75  Identities=23%  Similarity=0.142  Sum_probs=51.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHH---HH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA---AI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~---~~   80 (249)
                      .+.+++|+|+++.+|.++++.+...|.+|++++++.        ++.+.+....   ..   ...|..+.+....   ..
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~--------~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~  231 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSE--------DKLERAKELG---AD---YVIDYRKEDFVREVRELT  231 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcC---CC---eEEecCChHHHHHHHHHh
Confidence            346899999999999999999999999999998876        4444443321   11   1234444433333   22


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|.++++++.
T Consensus       232 ~~~~~d~~i~~~g~  245 (342)
T cd08266         232 GKRGVDVVVEHVGA  245 (342)
T ss_pred             CCCCCcEEEECCcH
Confidence            2  58999999874

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.74  E-value=0.006  Score=55.08  Aligned_cols=35  Identities=20%  Similarity=0.136  Sum_probs=31.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +.++|.|+| +|.+|+.++..|+..|++|+++++++
T Consensus         3 ~i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~   37 (495)
T PRK07531          3 MIMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHP   37 (495)
T ss_pred             CcCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            345899997 89999999999999999999999987

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.72  E-value=0.0083  Score=53.45  Aligned_cols=74  Identities=19%  Similarity=0.221  Sum_probs=51.3

Q ss_pred             CCCeEEEecc----------------chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      ++++||||+|                ||-.|.+|++++..+|++|+.+.-..        .       +. ....++++.
T Consensus       255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~--------~-------~~-~p~~v~~i~  318 (475)
T PRK13982        255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV--------D-------LA-DPQGVKVIH  318 (475)
T ss_pred             CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc--------C-------CC-CCCCceEEE
Confidence            4679999987                59999999999999999999886322        0       11 112455544


Q ss_pred             cCCCChhhHHHHHc---CCCEEEEccccCCC
Q 025660           68 ADLSHPDGFDAAIA---GCTGVLHVATPVDF   95 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~---~~d~vih~a~~~~~   95 (249)
                      .  ...+++.+.++   +.|++|++|+..++
T Consensus       319 V--~ta~eM~~av~~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        319 V--ESARQMLAAVEAALPADIAIFAAAVADW  347 (475)
T ss_pred             e--cCHHHHHHHHHhhCCCCEEEEeccccce
Confidence            3  34444444433   37999999999777

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.72  E-value=0.028  Score=40.78  Aligned_cols=98  Identities=17%  Similarity=0.286  Sum_probs=54.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHH-CCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      ++|.|.|++|-.|+.+++.+.+ .++++.+...+..+... . .....+....         ...+.-.++++++++.+|
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~-g-~d~g~~~~~~---------~~~~~v~~~l~~~~~~~D   69 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKV-G-KDVGELAGIG---------PLGVPVTDDLEELLEEAD   69 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTT-T-SBCHHHCTSS---------T-SSBEBS-HHHHTTH-S
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccc-c-chhhhhhCcC---------CcccccchhHHHhcccCC
Confidence            4799999999999999999999 57887665444310000 0 0000111111         111122266778888899


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ++|..-.                 -..+...++.+.+.+  ..+|.-+|
T Consensus        70 VvIDfT~-----------------p~~~~~~~~~~~~~g--~~~ViGTT   99 (124)
T PF01113_consen   70 VVIDFTN-----------------PDAVYDNLEYALKHG--VPLVIGTT   99 (124)
T ss_dssp             EEEEES------------------HHHHHHHHHHHHHHT---EEEEE-S
T ss_pred             EEEEcCC-----------------hHHhHHHHHHHHhCC--CCEEEECC
Confidence            9996542                 233445667777776  34444343

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK08223 hypothetical protein; Validated

Probab=96.69  E-value=0.025  Score=47.07  Aligned_cols=110  Identities=13%  Similarity=0.204  Sum_probs=63.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------ccCC----chh----hhhhccCCCCCCCeEEEEc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------EHRN----SKD----LSFLKNLPGASERLRIFHA   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~~~~----~~~----~~~l~~~~~~~~~~~~~~~   68 (249)
                      ..+|+|.| +|++|+.+++.|...|. +++++|.+.-+.       .+..    ..+    .+.+.++. ...+++.+..
T Consensus        27 ~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iN-P~v~V~~~~~  104 (287)
T PRK08223         27 NSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDIN-PELEIRAFPE  104 (287)
T ss_pred             cCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHC-CCCEEEEEec
Confidence            46899998 66799999999999996 788887653111       0000    011    11122221 1224555555


Q ss_pred             CCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      .++ ++...++++++|+||.+.-.       +       ++..-..+-++|++.+  ..+|+.+.
T Consensus       105 ~l~-~~n~~~ll~~~DlVvD~~D~-------~-------~~~~r~~ln~~c~~~~--iP~V~~~~  152 (287)
T PRK08223        105 GIG-KENADAFLDGVDVYVDGLDF-------F-------EFDARRLVFAACQQRG--IPALTAAP  152 (287)
T ss_pred             ccC-ccCHHHHHhCCCEEEECCCC-------C-------cHHHHHHHHHHHHHcC--CCEEEEec
Confidence            555 34567778889998844321       1       0122234556777776  56676644

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.69  E-value=0.015  Score=47.59  Aligned_cols=115  Identities=14%  Similarity=0.047  Sum_probs=71.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +-+|.|.||.|+||+-|..- ++...   +..+.+....      .--...+..+..     ..-....+-++++++.++
T Consensus        28 ~~KVAvlGAaGGIGQPLSLL-lK~np~Vs~LaLYDi~~~------~GVaaDlSHI~T-----~s~V~g~~g~~~L~~al~   95 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLL-LKLNPLVSELALYDIANT------PGVAADLSHINT-----NSSVVGFTGADGLENALK   95 (345)
T ss_pred             cceEEEEecCCccCccHHHH-HhcCcccceeeeeecccC------CcccccccccCC-----CCceeccCChhHHHHHhc
Confidence            45899999999999997654 45554   3444444330      000001111110     111223344568999999


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ++|+||--||...- +....++.+.+|..-.+.|..++.+.- ...+|.+=|
T Consensus        96 ~advVvIPAGVPRK-PGMTRDDLFn~NAgIv~~l~~aia~~c-P~A~i~vIs  145 (345)
T KOG1494|consen   96 GADVVVIPAGVPRK-PGMTRDDLFNINAGIVKTLAAAIAKCC-PNALILVIS  145 (345)
T ss_pred             CCCEEEecCCCCCC-CCCcHHHhhhcchHHHHHHHHHHHhhC-ccceeEeec
Confidence            99999999997543 233334889999999999999999876 344444444

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.69  E-value=0.042  Score=45.44  Aligned_cols=111  Identities=17%  Similarity=0.332  Sum_probs=64.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCC-----------chhh----hhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRN-----------SKDL----SFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-----------~~~~----~~l~~~~~~~~~~~~~~   67 (249)
                      +..+|+|.| .|.+|+++++.|...| .++++++.+.-...--+           ..+.    +.+.++. ...++..+.
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~IN-P~~~V~~i~  106 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQIN-PECRVTVVD  106 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHC-CCcEEEEEe
Confidence            346899998 6779999999999999 58888887531110000           0111    1112221 112333332


Q ss_pred             cCCCChhhHHHHHc-CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           68 ADLSHPDGFDAAIA-GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                       +..+++...+++. ++|+||.+...                +..-..|.+.|++.+  ..+|..+++.
T Consensus       107 -~~i~~e~~~~ll~~~~D~VIdaiD~----------------~~~k~~L~~~c~~~~--ip~I~~gGag  156 (268)
T PRK15116        107 -DFITPDNVAEYMSAGFSYVIDAIDS----------------VRPKAALIAYCRRNK--IPLVTTGGAG  156 (268)
T ss_pred             -cccChhhHHHHhcCCCCEEEEcCCC----------------HHHHHHHHHHHHHcC--CCEEEECCcc
Confidence             2334566666664 68998876653                122235777888876  4666665544

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.68  E-value=0.033  Score=48.08  Aligned_cols=78  Identities=17%  Similarity=0.235  Sum_probs=54.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeE-EEE-----cCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLR-IFH-----ADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~-~~~-----~Dl~~~~~~~   77 (249)
                      |+|-|.| +|++|.-..--|.+.||+|++++.++        .+.+.+..-..+  .++++ +++     +-++--.+++
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~--------~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~   71 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDE--------SKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYE   71 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCH--------HHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHH
Confidence            4789998 99999999999999999999999998        777776433211  11111 111     1133334677


Q ss_pred             HHHcCCCEEEEcccc
Q 025660           78 AAIAGCTGVLHVATP   92 (249)
Q Consensus        78 ~~~~~~d~vih~a~~   92 (249)
                      ..+++.|+++-+-|.
T Consensus        72 ~a~~~adv~fIavgT   86 (414)
T COG1004          72 EAVKDADVVFIAVGT   86 (414)
T ss_pred             HHHhcCCEEEEEcCC
Confidence            778889999887774

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.68  E-value=0.005  Score=51.48  Aligned_cols=73  Identities=21%  Similarity=0.174  Sum_probs=48.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCC-CCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ..++++|.| +|+.|++++..|.+.|. +|++++|+.        ++.+.+.+.. .......+..     .+++.+.+.
T Consensus       126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~--------~ka~~la~~l~~~~~~~~~~~-----~~~~~~~~~  191 (284)
T PRK12549        126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDP--------ARAAALADELNARFPAARATA-----GSDLAAALA  191 (284)
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCH--------HHHHHHHHHHHhhCCCeEEEe-----ccchHhhhC
Confidence            346899999 56699999999999997 899999987        5555543221 1111122211     123445567


Q ss_pred             CCCEEEEcc
Q 025660           82 GCTGVLHVA   90 (249)
Q Consensus        82 ~~d~vih~a   90 (249)
                      ++|+||++-
T Consensus       192 ~aDiVInaT  200 (284)
T PRK12549        192 AADGLVHAT  200 (284)
T ss_pred             CCCEEEECC
Confidence            899999983

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.68  E-value=0.0059  Score=53.71  Aligned_cols=75  Identities=9%  Similarity=0.099  Sum_probs=54.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++|+|.|+ |..|+.+++.|.+.|. ++++..|+.        ++...+.+...   .     +.....+++.+.+..
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~--------~ra~~La~~~~---~-----~~~~~~~~l~~~l~~  242 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTI--------EKAQKITSAFR---N-----ASAHYLSELPQLIKK  242 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCH--------HHHHHHHHHhc---C-----CeEecHHHHHHHhcc
Confidence            4578999995 8899999999999995 789999987        55555543321   0     122233566778889


Q ss_pred             CCEEEEccccCCC
Q 025660           83 CTGVLHVATPVDF   95 (249)
Q Consensus        83 ~d~vih~a~~~~~   95 (249)
                      +|+||++-+...+
T Consensus       243 aDiVI~aT~a~~~  255 (414)
T PRK13940        243 ADIIIAAVNVLEY  255 (414)
T ss_pred             CCEEEECcCCCCe
Confidence            9999999876443

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.66  E-value=0.007  Score=51.18  Aligned_cols=73  Identities=25%  Similarity=0.258  Sum_probs=49.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC-hhhHHHHHcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-PDGFDAAIAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~   83 (249)
                      ..++||+||+|.+|.++++.+...|.+|+++++++        ++.+.+....   . ..++  +..+ .+.+.+. .++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~--------~~~~~~~~~~---~-~~~~--~~~~~~~~~~~~-~~~  227 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP--------EKLKILKELG---A-DYVI--DGSKFSEDVKKL-GGA  227 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH--------HHHHHHHHcC---C-cEEE--ecHHHHHHHHhc-cCC
Confidence            46899999999999999999999999999998876        4444443321   1 1222  2211 1222222 268


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |.|+++++.
T Consensus       228 d~v~~~~g~  236 (332)
T cd08259         228 DVVIELVGS  236 (332)
T ss_pred             CEEEECCCh
Confidence            999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.66  E-value=0.0028  Score=43.60  Aligned_cols=67  Identities=24%  Similarity=0.278  Sum_probs=46.3

Q ss_pred             eEEEeccchhhHHHHHHHHHHCC---CeEEEE-EcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHG---YSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ||.|+| +|-+|++|++.|++.|   ++|.+. +|++        ++...+.+...    .....      .+..+++++
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~--------~~~~~~~~~~~----~~~~~------~~~~~~~~~   61 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSP--------EKAAELAKEYG----VQATA------DDNEEAAQE   61 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSH--------HHHHHHHHHCT----TEEES------EEHHHHHHH
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcH--------HHHHHHHHhhc----ccccc------CChHHhhcc
Confidence            577885 8999999999999999   899855 8887        66666543321    11111      245667778


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      .|+||.+.-+
T Consensus        62 advvilav~p   71 (96)
T PF03807_consen   62 ADVVILAVKP   71 (96)
T ss_dssp             TSEEEE-S-G
T ss_pred             CCEEEEEECH
Confidence            9999977654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.65  E-value=0.0056  Score=51.14  Aligned_cols=77  Identities=19%  Similarity=0.091  Sum_probs=50.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++++++|.| +|..|++++..|.+.|. +|+++.|+.        ++.+.+.+.......+  ..  +...+++...+..
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~--------~ka~~La~~~~~~~~~--~~--~~~~~~~~~~~~~  190 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNP--------DKLSRLVDLGVQVGVI--TR--LEGDSGGLAIEKA  190 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCH--------HHHHHHHHHhhhcCcc--ee--ccchhhhhhcccC
Confidence            357899998 57799999999999996 799999987        5555554322111111  11  1111334445567


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      +|+|||+-...
T Consensus       191 ~DiVInaTp~g  201 (282)
T TIGR01809       191 AEVLVSTVPAD  201 (282)
T ss_pred             CCEEEECCCCC
Confidence            99999987653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.64  E-value=0.008  Score=50.31  Aligned_cols=82  Identities=11%  Similarity=0.043  Sum_probs=48.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++++|.|| |+.+++++-.|...|. +|+++.|+..     ..++.+.+.+.............++.+.+.+.+.+.+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~-----~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~  196 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE-----FFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALAS  196 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc-----HHHHHHHHHHHhhhccCceEEEechhhhhhhhhhccc
Confidence            3578999996 5569999999999885 8999999851     0124444432211100111112233333335556668


Q ss_pred             CCEEEEccc
Q 025660           83 CTGVLHVAT   91 (249)
Q Consensus        83 ~d~vih~a~   91 (249)
                      +|+|||+--
T Consensus       197 aDivINaTp  205 (288)
T PRK12749        197 ADILTNGTK  205 (288)
T ss_pred             CCEEEECCC
Confidence            999998653

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.63  E-value=0.0048  Score=52.40  Aligned_cols=33  Identities=27%  Similarity=0.312  Sum_probs=30.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++|.|.| .|.+|+.++..|.+.|++|++++|++
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~   34 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWARDP   34 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCH
Confidence            4799998 68999999999999999999999986

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.62  E-value=0.0044  Score=52.62  Aligned_cols=34  Identities=26%  Similarity=0.330  Sum_probs=31.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .++|.|+| +|-+|+.++..|+..|++|+++++++
T Consensus         7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~   40 (321)
T PRK07066          7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAP   40 (321)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            46899998 69999999999999999999999986

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.57  E-value=0.0071  Score=53.39  Aligned_cols=72  Identities=14%  Similarity=0.131  Sum_probs=51.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++++|+|+ |.+|..+++.|...| .+|++++|+.        ++...+.....    ...+     +.+++.+.+.+
T Consensus       179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~--------~ra~~la~~~g----~~~i-----~~~~l~~~l~~  240 (417)
T TIGR01035       179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTY--------ERAEDLAKELG----GEAV-----KFEDLEEYLAE  240 (417)
T ss_pred             cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHHHcC----CeEe-----eHHHHHHHHhh
Confidence            3578999995 999999999999999 7899999987        44443322111    1111     23466777889


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      +|+||.+.+..
T Consensus       241 aDvVi~aT~s~  251 (417)
T TIGR01035       241 ADIVISSTGAP  251 (417)
T ss_pred             CCEEEECCCCC
Confidence            99999886643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.57  E-value=0.0074  Score=51.15  Aligned_cols=71  Identities=17%  Similarity=0.133  Sum_probs=51.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++|+|.|+ |-+|..+++.|...| .+|++++|+.        ++...+.....    .     +..+.+++.+.+.+
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~--------~ra~~la~~~g----~-----~~~~~~~~~~~l~~  238 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTY--------ERAEELAKELG----G-----NAVPLDELLELLNE  238 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHHcC----C-----eEEeHHHHHHHHhc
Confidence            4678999995 999999999999876 6899999987        55444432211    1     12233456777888


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||.+.+.
T Consensus       239 aDvVi~at~~  248 (311)
T cd05213         239 ADVVISATGA  248 (311)
T ss_pred             CCEEEECCCC
Confidence            9999988775

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.56  E-value=0.0052  Score=52.45  Aligned_cols=37  Identities=27%  Similarity=0.247  Sum_probs=32.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+ .+++|.|.| +|-+|.+++..|.+.|++|++++|++
T Consensus         1 ~~-~~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~   37 (328)
T PRK14618          1 MH-HGMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRP   37 (328)
T ss_pred             CC-CCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            44 345899998 78999999999999999999999986

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.55  E-value=0.038  Score=44.75  Aligned_cols=109  Identities=11%  Similarity=0.111  Sum_probs=63.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------ccCC----chhh----hhhccCCCCCCCeEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------EHRN----SKDL----SFLKNLPGASERLRIFHADL   70 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~~~~----~~~~----~~l~~~~~~~~~~~~~~~Dl   70 (249)
                      +|||.| .|.+|.++++.|...|. +++++|.+.-+.       ..+.    ..+.    +.+.+.. ...++..+..++
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~n-p~v~i~~~~~~i   78 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRN-PNCKVVPYQNKV   78 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHC-CCCEEEEEeccC
Confidence            589998 67799999999999996 788887753100       0000    1111    1112221 123566677777


Q ss_pred             CChhhH-HHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           71 SHPDGF-DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        71 ~~~~~~-~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      .+.+.+ .+.++++|+||.+...                ...-+.+-+.|.+.+  ..+|..++..
T Consensus        79 ~~~~~~~~~f~~~~DvVi~a~Dn----------------~~aR~~ln~~c~~~~--iplI~~g~~G  126 (234)
T cd01484          79 GPEQDFNDTFFEQFHIIVNALDN----------------IIARRYVNGMLIFLI--VPLIESGTEG  126 (234)
T ss_pred             ChhhhchHHHHhCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEcccC
Confidence            654433 4567889998865331                222334556666666  4677766644

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.54  E-value=0.0076  Score=50.60  Aligned_cols=65  Identities=17%  Similarity=0.239  Sum_probs=45.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      ++|.|+| .|.+|+.+++.|.+.|++|++++|+.        ++.+.+.+.     ...       -.++..++++++|+
T Consensus         3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~--------~~~~~~~~~-----g~~-------~~~~~~e~~~~~d~   61 (296)
T PRK11559          3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNP--------EAVAEVIAA-----GAE-------TASTAKAVAEQCDV   61 (296)
T ss_pred             ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCH--------HHHHHHHHC-----CCe-------ecCCHHHHHhcCCE
Confidence            5799998 79999999999999999999999987        444433321     111       11234556677888


Q ss_pred             EEEccc
Q 025660           86 VLHVAT   91 (249)
Q Consensus        86 vih~a~   91 (249)
                      ||-+..
T Consensus        62 vi~~vp   67 (296)
T PRK11559         62 IITMLP   67 (296)
T ss_pred             EEEeCC
Confidence            776654

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.54  E-value=0.056  Score=44.22  Aligned_cols=74  Identities=26%  Similarity=0.368  Sum_probs=53.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+|||.|||+ =|+.|++.|.++|+ |++..-.+        -..+.+.   .......+..+-+.+.+++.++++  ++
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~--------~g~~~~~---~~~~~~~v~~G~lg~~~~l~~~l~~~~i   67 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATS--------YGGELLK---PELPGLEVRVGRLGDEEGLAEFLRENGI   67 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhh--------hhHhhhc---cccCCceEEECCCCCHHHHHHHHHhCCC
Confidence            5899999998 79999999999999 65544333        1111111   111246788899989999999996  69


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      +.||...-+
T Consensus        68 ~~vIDATHP   76 (249)
T PF02571_consen   68 DAVIDATHP   76 (249)
T ss_pred             cEEEECCCc
Confidence            999988754

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.53  E-value=0.024  Score=50.47  Aligned_cols=80  Identities=14%  Similarity=0.058  Sum_probs=54.1

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |...+++|+|+|++ .+|.++++.|.++|++|.+.+....+      +....++..   ..++.++.+...+     ..+
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~------~~~~~l~~~---~~gi~~~~g~~~~-----~~~   65 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKP------ERVAQIGKM---FDGLVFYTGRLKD-----ALD   65 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCc------hhHHHHhhc---cCCcEEEeCCCCH-----HHH
Confidence            66567899999975 79999999999999999999876521      112223221   1245565554321     134


Q ss_pred             cCCCEEEEccccCCC
Q 025660           81 AGCTGVLHVATPVDF   95 (249)
Q Consensus        81 ~~~d~vih~a~~~~~   95 (249)
                      .++|.||...|+.+.
T Consensus        66 ~~~d~vv~spgi~~~   80 (445)
T PRK04308         66 NGFDILALSPGISER   80 (445)
T ss_pred             hCCCEEEECCCCCCC
Confidence            678999999998543

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.53  E-value=0.02  Score=49.00  Aligned_cols=31  Identities=29%  Similarity=0.355  Sum_probs=26.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHH-CCCe
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLD-HGYS   31 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~-~g~~   31 (249)
                      |+.+..+|.|.||||++|+.+++.|.+ ...+
T Consensus         1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~   32 (347)
T PRK06728          1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFN   32 (347)
T ss_pred             CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCC
Confidence            666778999999999999999999985 4556

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.52  E-value=0.0081  Score=53.16  Aligned_cols=72  Identities=19%  Similarity=0.213  Sum_probs=51.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++|+|+|+ |.+|..+++.|...|. +|++++|+.        ++...+....+         ++..+.+++.+.+.+
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~--------~ra~~la~~~g---------~~~~~~~~~~~~l~~  242 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTL--------ERAEELAEEFG---------GEAIPLDELPEALAE  242 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCH--------HHHHHHHHHcC---------CcEeeHHHHHHHhcc
Confidence            4578999985 9999999999999997 899999987        45443432211         122233556677788


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      +|+||.+.+..
T Consensus       243 aDvVI~aT~s~  253 (423)
T PRK00045        243 ADIVISSTGAP  253 (423)
T ss_pred             CCEEEECCCCC
Confidence            99999887653

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.51  E-value=0.011  Score=49.08  Aligned_cols=56  Identities=13%  Similarity=0.096  Sum_probs=47.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++++|+|+++.+|+.++..|.++|..|+++.++.                                  ..+.+.++++
T Consensus       157 ~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------------------~~l~~~~~~A  202 (286)
T PRK14175        157 EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------------------KDMASYLKDA  202 (286)
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------------hhHHHHHhhC
Confidence            578999999999999999999999999998886543                                  2456678899


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+||.+.|..
T Consensus       203 DIVIsAvg~p  212 (286)
T PRK14175        203 DVIVSAVGKP  212 (286)
T ss_pred             CEEEECCCCC
Confidence            9999888863

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.50  E-value=0.0075  Score=50.28  Aligned_cols=32  Identities=28%  Similarity=0.399  Sum_probs=30.1

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +|.|.| .|.+|..++..|.+.|++|++++|+.
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~   33 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRE   33 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCH
Confidence            699998 89999999999999999999999987

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.49  E-value=0.047  Score=47.85  Aligned_cols=110  Identities=15%  Similarity=0.134  Sum_probs=63.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------cc----CCchhh----hhhccCCCCCCCeEEEEc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------EH----RNSKDL----SFLKNLPGASERLRIFHA   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~~----~~~~~~----~~l~~~~~~~~~~~~~~~   68 (249)
                      ..+|+|.| .|.+|+.+++.|...|. +++++|.+.-+.       .+    -...+.    +.+.++.+ ..+++.+..
T Consensus        42 ~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np-~v~i~~~~~  119 (392)
T PRK07878         42 NARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINP-LVNVRLHEF  119 (392)
T ss_pred             cCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCC-CcEEEEEec
Confidence            46899998 67799999999999996 788877642100       00    000111    11222211 224455555


Q ss_pred             CCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      .++. +...++++++|+||.+..-                ...-..+-++|.+.+  ..+|+.+...
T Consensus       120 ~i~~-~~~~~~~~~~D~Vvd~~d~----------------~~~r~~ln~~~~~~~--~p~v~~~~~g  167 (392)
T PRK07878        120 RLDP-SNAVELFSQYDLILDGTDN----------------FATRYLVNDAAVLAG--KPYVWGSIYR  167 (392)
T ss_pred             cCCh-hHHHHHHhcCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEEecc
Confidence            5554 4466778889999966431                111123446667766  4577766554

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.47  E-value=0.0056  Score=55.68  Aligned_cols=34  Identities=21%  Similarity=0.140  Sum_probs=31.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +++++|+|+ |++|++++..|.+.|++|++++|+.
T Consensus       379 ~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~  412 (529)
T PLN02520        379 GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTY  412 (529)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            578999997 7899999999999999999998876

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.46  E-value=0.0092  Score=49.82  Aligned_cols=76  Identities=20%  Similarity=0.281  Sum_probs=48.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCC-CCCCeEEEEcCCCChhhHHHHHcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      +++++|.|| |+.|++++-.|.+.|. +++++.|+.        ++.+.+.+... ..........+   ...+.+....
T Consensus       127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~--------~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~  194 (283)
T PRK14027        127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT--------SRAQALADVINNAVGREAVVGVD---ARGIEDVIAA  194 (283)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH--------HHHHHHHHHHhhccCcceEEecC---HhHHHHHHhh
Confidence            478999995 7799999999999985 789999987        55555533211 00111111122   2233444567


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+|||+-..
T Consensus       195 ~divINaTp~  204 (283)
T PRK14027        195 ADGVVNATPM  204 (283)
T ss_pred             cCEEEEcCCC
Confidence            9999987643

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.46  E-value=0.045  Score=47.54  Aligned_cols=85  Identities=19%  Similarity=0.202  Sum_probs=52.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------cc--------CCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------EH--------RNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~~--------~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      +..+|+|.| .|.+|+.+++.|...|. ++++++.+.-+.       .+        +.....+.+.++.. ..+++.+.
T Consensus        40 ~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np-~v~i~~~~  117 (370)
T PRK05600         40 HNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP-DIRVNALR  117 (370)
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC-CCeeEEee
Confidence            346899998 56799999999999995 888888762100       00        00011112222221 23455555


Q ss_pred             cCCCChhhHHHHHcCCCEEEEccc
Q 025660           68 ADLSHPDGFDAAIAGCTGVLHVAT   91 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~~~d~vih~a~   91 (249)
                      ..++ ++...++++++|+||.|..
T Consensus       118 ~~i~-~~~~~~~~~~~DlVid~~D  140 (370)
T PRK05600        118 ERLT-AENAVELLNGVDLVLDGSD  140 (370)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCC
Confidence            5564 4567778889999997654

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.41  E-value=0.039  Score=44.94  Aligned_cols=98  Identities=19%  Similarity=0.160  Sum_probs=60.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH--H-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA--I-   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~--~-   80 (249)
                      .+.+|||+|+++ +|..+++.+...|.+|+++++++        ++.+.+.....    ..+  .|..+.+....+  . 
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~--------~~~~~~~~~g~----~~~--~~~~~~~~~~~~~~~~  198 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSD--------EKLELAKELGA----DHV--IDYKEEDLEEELRLTG  198 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCH--------HHHHHHHHhCC----cee--ccCCcCCHHHHHHHhc
Confidence            456899999999 99999998888899999998876        44444433311    111  233333222222  1 


Q ss_pred             -cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           81 -AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        81 -~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                       ..+|.++++++..                .....+++.++.   .++++.+++..
T Consensus       199 ~~~~d~vi~~~~~~----------------~~~~~~~~~l~~---~G~~v~~~~~~  235 (271)
T cd05188         199 GGGADVVIDAVGGP----------------ETLAQALRLLRP---GGRIVVVGGTS  235 (271)
T ss_pred             CCCCCEEEECCCCH----------------HHHHHHHHhccc---CCEEEEEccCC
Confidence             3589999987741                112233444443   35888888754

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.39  E-value=0.013  Score=49.68  Aligned_cols=35  Identities=17%  Similarity=0.183  Sum_probs=31.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++|.|+| +|.+|..++..|.+.|++|++++++.
T Consensus         3 ~~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~   37 (311)
T PRK06130          3 PIQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVME   37 (311)
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCH
Confidence            456899998 69999999999999999999999877

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.38  E-value=0.012  Score=49.35  Aligned_cols=56  Identities=16%  Similarity=0.075  Sum_probs=47.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+|+|.|+|.+|.+|+.++..|+++|+.|+++.|..                                  .++++..+++
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t----------------------------------~~l~e~~~~A  203 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS----------------------------------TDAKALCRQA  203 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC----------------------------------CCHHHHHhcC
Confidence            578999999999999999999999999999987665                                  0466677788


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+||-+.|..
T Consensus       204 DIVIsavg~~  213 (301)
T PRK14194        204 DIVVAAVGRP  213 (301)
T ss_pred             CEEEEecCCh
Confidence            9999887753

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.37  E-value=0.016  Score=49.43  Aligned_cols=74  Identities=23%  Similarity=0.211  Sum_probs=49.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh---hhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~   81 (249)
                      +.+|||+||+|.+|+..++-+-..|..++++..++        ++.+.+.++-.    -  +..|.++.   +.+.++..
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~--------~k~~~~~~lGA----d--~vi~y~~~~~~~~v~~~t~  208 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS--------EKLELLKELGA----D--HVINYREEDFVEQVRELTG  208 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH--------HHHHHHHhcCC----C--EEEcCCcccHHHHHHHHcC
Confidence            57899999999999999988888897776666665        44445555432    1  12233343   33444443


Q ss_pred             --CCCEEEEcccc
Q 025660           82 --GCTGVLHVATP   92 (249)
Q Consensus        82 --~~d~vih~a~~   92 (249)
                        ++|+|+.+-|.
T Consensus       209 g~gvDvv~D~vG~  221 (326)
T COG0604         209 GKGVDVVLDTVGG  221 (326)
T ss_pred             CCCceEEEECCCH
Confidence              48999988774

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.34  E-value=0.0048  Score=51.68  Aligned_cols=33  Identities=15%  Similarity=0.273  Sum_probs=30.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++|.|.| .|.+|..++..|.+.|++|+++++++
T Consensus         2 ~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~   34 (288)
T PRK09260          2 EKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIKQ   34 (288)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCCH
Confidence            5799999 59999999999999999999999987

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.34  E-value=0.014  Score=49.40  Aligned_cols=73  Identities=22%  Similarity=0.224  Sum_probs=48.5

Q ss_pred             CCCCC-CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHH
Q 025660            1 MEEGK-GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         1 m~~~~-~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      |...+ ++|.|+| +|.+|..++..|.+.|+  +|++++|++        +..+.......   ...     .  ..+..
T Consensus         1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~--------~~~~~a~~~g~---~~~-----~--~~~~~   61 (307)
T PRK07502          1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSA--------ETRARARELGL---GDR-----V--TTSAA   61 (307)
T ss_pred             CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCH--------HHHHHHHhCCC---Cce-----e--cCCHH
Confidence            54433 6899998 89999999999999985  899999987        44443332210   000     1  12234


Q ss_pred             HHHcCCCEEEEcccc
Q 025660           78 AAIAGCTGVLHVATP   92 (249)
Q Consensus        78 ~~~~~~d~vih~a~~   92 (249)
                      +.++++|+||.+...
T Consensus        62 ~~~~~aDvViiavp~   76 (307)
T PRK07502         62 EAVKGADLVILCVPV   76 (307)
T ss_pred             HHhcCCCEEEECCCH
Confidence            556789999987754

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.33  E-value=0.032  Score=47.68  Aligned_cols=34  Identities=15%  Similarity=0.244  Sum_probs=27.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC---eEEEEEc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVR   37 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r   37 (249)
                      ++++|.|.||||++|..|++-|.++.|   ++..+..
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS   39 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALAS   39 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence            567999999999999999999988544   6655543

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.32  E-value=0.013  Score=49.22  Aligned_cols=33  Identities=18%  Similarity=0.232  Sum_probs=30.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++|.|+| .|.+|..+++.|++.|++|++++|++
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~   34 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNP   34 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            3799998 89999999999999999999999987

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.32  E-value=0.038  Score=46.68  Aligned_cols=35  Identities=17%  Similarity=0.217  Sum_probs=28.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (249)
                      +.+|.|.||||++|..|++-|.++.+ ++..+..+.
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~   37 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAK   37 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCC
Confidence            45899999999999999998888764 666665443

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=96.31  E-value=0.2  Score=42.00  Aligned_cols=166  Identities=14%  Similarity=0.129  Sum_probs=93.9

Q ss_pred             CCeEEEecc-chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh-------H
Q 025660            5 KGRVCVTGG-TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-------F   76 (249)
Q Consensus         5 ~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-------~   76 (249)
                      +..|+|.|. +--+++.++..|-++|+-|++...+.        +..+.+++..  ...+.....|..++.+       +
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~--------ed~~~ve~e~--~~dI~~L~ld~~~~~~~~~~l~~f   72 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSA--------EDEKYVESED--RPDIRPLWLDDSDPSSIHASLSRF   72 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCH--------HHHHHHHhcc--CCCCCCcccCCCCCcchHHHHHHH
Confidence            457899995 78999999999999999999999887        5555554443  2346777777766543       3


Q ss_pred             HHHHcCC--------CEEEEcccc---------CCC---CCCChHHHhhhhHHh----HHHHHHHHHHhcC-CcceEEEE
Q 025660           77 DAAIAGC--------TGVLHVATP---------VDF---EDKEPEEVITQRAIN----GTLGILKSCLKSG-TVKRVVYT  131 (249)
Q Consensus        77 ~~~~~~~--------d~vih~a~~---------~~~---~~~~~~~~~~~~n~~----~t~~l~~~~~~~~-~~~~~v~~  131 (249)
                      .+.++..        .+..++.+.         .++   ...+.+...+..|+.    .++.|+..++... ...++|.+
T Consensus        73 ~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~  152 (299)
T PF08643_consen   73 ASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILF  152 (299)
T ss_pred             HHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE
Confidence            3333321        233344432         111   111223355555554    4555666666621 13566655


Q ss_pred             cccceeeccCCCccccCCCCCCchhHhhhcCCC-CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEe
Q 025660          132 SSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW-GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVV  199 (249)
Q Consensus       132 SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~  199 (249)
                      .-.........  .                +.| ....+..+...+.+-+++.. ++++++.++.|++.
T Consensus       153 ~Psi~ssl~~P--f----------------hspE~~~~~al~~~~~~LrrEl~~-~~I~V~~i~LG~l~  202 (299)
T PF08643_consen  153 NPSISSSLNPP--F----------------HSPESIVSSALSSFFTSLRRELRP-HNIDVTQIKLGNLD  202 (299)
T ss_pred             eCchhhccCCC--c----------------cCHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEeeeec
Confidence            53221111100  0                001 11344555566666666553 57999999999984

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.31  E-value=0.0092  Score=49.96  Aligned_cols=34  Identities=29%  Similarity=0.393  Sum_probs=31.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .++|.|.| +|.+|..++..|.+.|++|++++++.
T Consensus         3 ~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~   36 (287)
T PRK08293          3 IKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISD   36 (287)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            46899998 69999999999999999999999986

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.31  E-value=0.021  Score=48.55  Aligned_cols=72  Identities=19%  Similarity=0.224  Sum_probs=53.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++|+|+|+. .+|...++.+...|.+|++++|++        ++.+..+++-.    ..++  +-+|++..+.+.+.+|
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~--------~K~e~a~~lGA----d~~i--~~~~~~~~~~~~~~~d  231 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSE--------EKLELAKKLGA----DHVI--NSSDSDALEAVKEIAD  231 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCCh--------HHHHHHHHhCC----cEEE--EcCCchhhHHhHhhCc
Confidence            5789999977 899999988888999999999998        66665555522    1222  2226666666655699


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      .++.+++
T Consensus       232 ~ii~tv~  238 (339)
T COG1064         232 AIIDTVG  238 (339)
T ss_pred             EEEECCC
Confidence            9999988

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.31  E-value=0.012  Score=48.70  Aligned_cols=34  Identities=26%  Similarity=0.296  Sum_probs=30.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC---CeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG---YSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~   39 (249)
                      |++|.|+| +|-+|+.+++.|.+.|   ++|.+++|+.
T Consensus         2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~   38 (267)
T PRK11880          2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSP   38 (267)
T ss_pred             CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence            45899998 6999999999999998   7899999987

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.28  E-value=0.037  Score=49.58  Aligned_cols=78  Identities=12%  Similarity=0.117  Sum_probs=50.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeEEE----Ec-CCCChhhH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLRIF----HA-DLSHPDGF   76 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~----~~-Dl~~~~~~   76 (249)
                      |+|.|.| .|++|..++-.|.+.|  ++|+++++++        ++.+.+..-...  ...+.-+    .+ -++-..++
T Consensus         2 m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~--------~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~   72 (473)
T PLN02353          2 VKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISV--------PRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDV   72 (473)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCH--------HHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCH
Confidence            4799997 9999999999999885  7899999988        666665322110  0001000    01 12122334


Q ss_pred             HHHHcCCCEEEEcccc
Q 025660           77 DAAIAGCTGVLHVATP   92 (249)
Q Consensus        77 ~~~~~~~d~vih~a~~   92 (249)
                      .+.++++|++|-|.+.
T Consensus        73 ~~~i~~advi~I~V~T   88 (473)
T PLN02353         73 EKHVAEADIVFVSVNT   88 (473)
T ss_pred             HHHHhcCCEEEEEeCC
Confidence            5567789999988774

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.24  E-value=0.051  Score=45.10  Aligned_cols=69  Identities=17%  Similarity=0.106  Sum_probs=43.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC--CCeEEEE-EcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH--GYSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++|.|.| +|.||+.+++.|.+.  ++++.++ +|++        ++.+.+.....          ...-.++++++++
T Consensus         6 ~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~--------~~a~~~a~~~g----------~~~~~~~~eell~   66 (271)
T PRK13302          6 ELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDP--------QRHADFIWGLR----------RPPPVVPLDQLAT   66 (271)
T ss_pred             eeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCH--------HHHHHHHHhcC----------CCcccCCHHHHhc
Confidence            36899998 899999999999873  6788654 5554        33333322111          0011234555667


Q ss_pred             CCCEEEEcccc
Q 025660           82 GCTGVLHVATP   92 (249)
Q Consensus        82 ~~d~vih~a~~   92 (249)
                      ++|+|+-++..
T Consensus        67 ~~D~Vvi~tp~   77 (271)
T PRK13302         67 HADIVVEAAPA   77 (271)
T ss_pred             CCCEEEECCCc
Confidence            88999988764

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.23  E-value=0.017  Score=48.93  Aligned_cols=66  Identities=14%  Similarity=0.219  Sum_probs=49.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|.|.| .|-||+.+++.|..-|.+|++++|...        ..          ..+..+    ...+++.++++++
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~--------~~----------~~~~~~----~~~~~l~e~l~~a  191 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRK--------SW----------PGVQSF----AGREELSAFLSQT  191 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC--------CC----------CCceee----cccccHHHHHhcC
Confidence            457999998 899999999999999999999988651        10          011111    1345788899999


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|+.+...
T Consensus       192 Dvvv~~lPl  200 (312)
T PRK15469        192 RVLINLLPN  200 (312)
T ss_pred             CEEEECCCC
Confidence            999877765

>PRK07877 hypothetical protein; Provisional

Probab=96.22  E-value=0.063  Score=50.52  Aligned_cols=108  Identities=16%  Similarity=0.194  Sum_probs=66.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcc----------cCCchhhh----hhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPE----------HRNSKDLS----FLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~----------~~~~~~~~----~l~~~~~~~~~~~~~~   67 (249)
                      +..+|+|.|. | +|+.++..|...|.  ++++++.+.-+.+          .-+..|..    .+.++. ...+++.+.
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~in-p~i~v~~~~  182 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELD-PYLPVEVFT  182 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHC-CCCEEEEEe
Confidence            3468999998 7 99999999999994  8888877531100          00001111    112221 123566666


Q ss_pred             cCCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        68 ~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ..++ ++.+.++++++|+||.|.-.                +..=..+.+.|.+.+  ..+|+-++
T Consensus       183 ~~i~-~~n~~~~l~~~DlVvD~~D~----------------~~~R~~ln~~a~~~~--iP~i~~~~  229 (722)
T PRK07877        183 DGLT-EDNVDAFLDGLDVVVEECDS----------------LDVKVLLREAARARR--IPVLMATS  229 (722)
T ss_pred             ccCC-HHHHHHHhcCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEcC
Confidence            6676 67788899999999976542                111123446677766  46666664

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.22  E-value=0.016  Score=48.82  Aligned_cols=32  Identities=16%  Similarity=0.276  Sum_probs=30.1

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +|.|+| .|-+|+.+++.|.+.|++|.+++|++
T Consensus         2 ~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~   33 (298)
T TIGR00872         2 QLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQ   33 (298)
T ss_pred             EEEEEc-chHHHHHHHHHHHHCCCEEEEEECCH
Confidence            699998 79999999999999999999999987

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.21  E-value=0.012  Score=49.27  Aligned_cols=64  Identities=14%  Similarity=0.170  Sum_probs=45.5

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCEE
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGV   86 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   86 (249)
                      +|.|+| .|.+|+.+++.|.+.|++|++++|++        ++.+.+.+...            ....+..++++++|+|
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~--------~~~~~~~~~g~------------~~~~~~~~~~~~aDiv   59 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGP--------EVADELLAAGA------------VTAETARQVTEQADVI   59 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCH--------HHHHHHHHCCC------------cccCCHHHHHhcCCEE
Confidence            477887 79999999999999999999999987        55554433210            1112345666778887


Q ss_pred             EEccc
Q 025660           87 LHVAT   91 (249)
Q Consensus        87 ih~a~   91 (249)
                      |-+..
T Consensus        60 i~~vp   64 (291)
T TIGR01505        60 FTMVP   64 (291)
T ss_pred             EEecC
Confidence            76654

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.21  E-value=0.027  Score=42.74  Aligned_cols=58  Identities=19%  Similarity=0.237  Sum_probs=43.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+|+++|.|.+..+|+.|+.-|.++|..|+......                                  +++++.++++
T Consensus        35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------------------~~l~~~~~~A   80 (160)
T PF02882_consen   35 EGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------------------KNLQEITRRA   80 (160)
T ss_dssp             TT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------------------SSHHHHHTTS
T ss_pred             CCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------------------Ccccceeeec
Confidence            578999999999999999999999999998864443                                  3456677899


Q ss_pred             CEEEEccccCCC
Q 025660           84 TGVLHVATPVDF   95 (249)
Q Consensus        84 d~vih~a~~~~~   95 (249)
                      |+||-.+|....
T Consensus        81 DIVVsa~G~~~~   92 (160)
T PF02882_consen   81 DIVVSAVGKPNL   92 (160)
T ss_dssp             SEEEE-SSSTT-
T ss_pred             cEEeeeeccccc
Confidence            999988886443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.19  E-value=0.07  Score=45.71  Aligned_cols=72  Identities=18%  Similarity=0.224  Sum_probs=48.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +.+|+|+|+ |.+|...++-+...|. +|+++++++        ++.+.+.++..   . .+  .|..+. ++.+..+  
T Consensus       170 g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~--------~~~~~a~~lGa---~-~v--i~~~~~-~~~~~~~~~  233 (343)
T PRK09880        170 GKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSP--------RSLSLAREMGA---D-KL--VNPQND-DLDHYKAEK  233 (343)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCH--------HHHHHHHHcCC---c-EE--ecCCcc-cHHHHhccC
Confidence            568999986 8999999988888898 688888887        66665555421   1 12  233332 2333332  


Q ss_pred             -CCCEEEEcccc
Q 025660           82 -GCTGVLHVATP   92 (249)
Q Consensus        82 -~~d~vih~a~~   92 (249)
                       .+|+|+.+.|.
T Consensus       234 g~~D~vid~~G~  245 (343)
T PRK09880        234 GYFDVSFEVSGH  245 (343)
T ss_pred             CCCCEEEECCCC
Confidence             38999998884

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.18  E-value=0.023  Score=43.08  Aligned_cols=32  Identities=31%  Similarity=0.225  Sum_probs=28.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV   36 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~   36 (249)
                      ++++|+|.| +|-+|...++.|++.|++|++++
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEc
Confidence            568999998 68899999999999999999884

>PLN00203 glutamyl-tRNA reductase

Probab=96.18  E-value=0.023  Score=51.41  Aligned_cols=74  Identities=23%  Similarity=0.289  Sum_probs=52.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .++|+|+|+ |.+|..+++.|...|. +|+++.|+.        ++...+.+...   ...+.   ....++..+.+.++
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~--------era~~La~~~~---g~~i~---~~~~~dl~~al~~a  330 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSE--------ERVAALREEFP---DVEII---YKPLDEMLACAAEA  330 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCH--------HHHHHHHHHhC---CCceE---eecHhhHHHHHhcC
Confidence            578999996 9999999999999996 799999987        56555543211   11111   12234556778899


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+||.+-+..
T Consensus       331 DVVIsAT~s~  340 (519)
T PLN00203        331 DVVFTSTSSE  340 (519)
T ss_pred             CEEEEccCCC
Confidence            9999876543

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.16  E-value=0.045  Score=47.88  Aligned_cols=76  Identities=9%  Similarity=0.113  Sum_probs=46.7

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeEE----EEcCCCChhhHHHHH
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLRI----FHADLSHPDGFDAAI   80 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~~----~~~Dl~~~~~~~~~~   80 (249)
                      +|.|.| .|++|..++..|. .||+|++++++.        ++.+.+.+-...  ...+.-    ..+-++...+..+++
T Consensus         2 kI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~--------~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~   71 (388)
T PRK15057          2 KITISG-TGYVGLSNGLLIA-QNHEVVALDILP--------SRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAY   71 (388)
T ss_pred             EEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCH--------HHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhh
Confidence            688997 9999999996555 599999999998        666655432110  000000    011122222344556


Q ss_pred             cCCCEEEEcccc
Q 025660           81 AGCTGVLHVATP   92 (249)
Q Consensus        81 ~~~d~vih~a~~   92 (249)
                      +++|+||-+...
T Consensus        72 ~~ad~vii~Vpt   83 (388)
T PRK15057         72 RDADYVIIATPT   83 (388)
T ss_pred             cCCCEEEEeCCC
Confidence            789999877653

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.15  E-value=0.026  Score=48.16  Aligned_cols=67  Identities=18%  Similarity=0.233  Sum_probs=52.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++|.|.| +|.+|+=++.+-..-|++|++++-++.               .+...-.-..+..+..|++++.++.+.+|
T Consensus         1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~---------------~PA~~va~~~i~~~~dD~~al~ela~~~D   64 (375)
T COG0026           1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDAD---------------APAAQVADRVIVAAYDDPEALRELAAKCD   64 (375)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCC---------------CchhhcccceeecCCCCHHHHHHHHhhCC
Confidence            36899998 799999999999999999999987651               11111123467788889999999999988


Q ss_pred             EEE
Q 025660           85 GVL   87 (249)
Q Consensus        85 ~vi   87 (249)
                      +|-
T Consensus        65 ViT   67 (375)
T COG0026          65 VIT   67 (375)
T ss_pred             EEE
Confidence            875

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.15  E-value=0.026  Score=49.14  Aligned_cols=68  Identities=16%  Similarity=0.178  Sum_probs=51.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GCT   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   84 (249)
                      +|+|.| +|..|..+++++.+.|++|++++.++.        .... . .     .-..+..|..|++.+.++++  ++|
T Consensus         1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~--------~~~~-~-~-----ad~~~~~~~~d~~~l~~~~~~~~id   64 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYAN--------APAM-Q-V-----AHRSYVINMLDGDALRAVIEREKPD   64 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCC--------Cchh-h-h-----CceEEEcCCCCHHHHHHHHHHhCCC
Confidence            589999 689999999999999999999998761        1110 0 0     12456778899999988887  699


Q ss_pred             EEEEcc
Q 025660           85 GVLHVA   90 (249)
Q Consensus        85 ~vih~a   90 (249)
                      .|+-..
T Consensus        65 ~v~~~~   70 (380)
T TIGR01142        65 YIVPEI   70 (380)
T ss_pred             EEEecc
Confidence            888543

This enzyme is an alternative to PurN (TIGR00639)

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.13  E-value=0.022  Score=47.71  Aligned_cols=75  Identities=20%  Similarity=0.214  Sum_probs=51.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+++++|+|++|.+|.++++.+...|.+|++++++.        ++.+.+....   .. ..  .|..+.+   .+.+..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~--------~~~~~~~~~g---~~-~~--~~~~~~~~~~~~~~~~  209 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSA--------EGAELVRQAG---AD-AV--FNYRAEDLADRILAAT  209 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcC---CC-EE--EeCCCcCHHHHHHHHc
Confidence            357899999999999999999999999999998876        4444443321   11 11  2333333   333333


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|.++++++.
T Consensus       210 ~~~~~d~vi~~~~~  223 (325)
T cd08253         210 AGQGVDVIIEVLAN  223 (325)
T ss_pred             CCCceEEEEECCch
Confidence            3  58999998863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.12  E-value=0.013  Score=48.86  Aligned_cols=74  Identities=20%  Similarity=0.253  Sum_probs=48.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +++++|.| +|+.+++++..|.+.| .+++++.|..        ++.+.|.+....... .....++.+.+...    ..
T Consensus       126 ~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~--------~ra~~La~~~~~~~~-~~~~~~~~~~~~~~----~~  191 (283)
T COG0169         126 GKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTR--------ERAEELADLFGELGA-AVEAAALADLEGLE----EA  191 (283)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHHhhhccc-cccccccccccccc----cc
Confidence            47899999 5669999999999999 5899999988        666666544331111 11112222222211    68


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|||+-..
T Consensus       192 dliINaTp~  200 (283)
T COG0169         192 DLLINATPV  200 (283)
T ss_pred             CEEEECCCC
Confidence            999988654

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.10  E-value=0.012  Score=52.84  Aligned_cols=35  Identities=20%  Similarity=0.238  Sum_probs=31.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .+++++|+|+ |.+|++++..|.+.|++|++.+|+.
T Consensus       331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~  365 (477)
T PRK09310        331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTK  365 (477)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            3578999995 7999999999999999999998876

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.09  E-value=0.066  Score=46.00  Aligned_cols=33  Identities=30%  Similarity=0.483  Sum_probs=27.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRS   38 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (249)
                      ++|.|+||+|++|+.|++.|.+++ .++..+..+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            379999999999999999888876 588877544

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.09  E-value=0.025  Score=47.82  Aligned_cols=74  Identities=19%  Similarity=0.221  Sum_probs=50.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh---hhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~---~~~~~~~   80 (249)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.        ++.+.+.+...    -+++  |..+.   +.+.++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~--------~~~~~l~~~Ga----~~vi--~~~~~~~~~~v~~~~  208 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSD--------DKVAWLKELGF----DAVF--NYKTVSLEEALKEAA  208 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcCC----CEEE--eCCCccHHHHHHHHC
Confidence            346899999999999999988888899999998877        56666555321    1222  22222   2233332


Q ss_pred             -cCCCEEEEccc
Q 025660           81 -AGCTGVLHVAT   91 (249)
Q Consensus        81 -~~~d~vih~a~   91 (249)
                       .++|+|+++.|
T Consensus       209 ~~gvd~vld~~g  220 (329)
T cd08294         209 PDGIDCYFDNVG  220 (329)
T ss_pred             CCCcEEEEECCC
Confidence             24799998776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.08  E-value=0.064  Score=42.71  Aligned_cols=41  Identities=24%  Similarity=0.361  Sum_probs=28.7

Q ss_pred             eEEEeccchhhHHHHHHHHHHC--CCe-EEEEEcCCCCcccCCchhhhhhccC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDH--GYS-VTTTVRSELDPEHRNSKDLSFLKNL   56 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~--g~~-V~~~~r~~~~~~~~~~~~~~~l~~~   56 (249)
                      +|.|+| +|.||..+++.+.+.  +.+ |.+.+|+.        ++...+...
T Consensus         2 ~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~--------ek~~~~~~~   45 (255)
T COG1712           2 KVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDE--------EKAKELEAS   45 (255)
T ss_pred             eEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCH--------HHHHHHHhh
Confidence            688998 999999999877654  354 45666766        555555443

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.07  E-value=0.0066  Score=46.04  Aligned_cols=74  Identities=16%  Similarity=0.249  Sum_probs=47.0

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC---CCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG---ASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ||.|.| +|-.|.+++..|..+|++|+++.|++        +..+.+.....   ....... ...+.-..++++++++.
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~--------~~~~~i~~~~~n~~~~~~~~l-~~~i~~t~dl~~a~~~a   70 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDE--------EQIEEINETRQNPKYLPGIKL-PENIKATTDLEEALEDA   70 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCH--------HHHHHHHHHTSETTTSTTSBE-ETTEEEESSHHHHHTT-
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccH--------HHHHHHHHhCCCCCCCCCccc-CcccccccCHHHHhCcc
Confidence            588998 68899999999999999999999987        55554432211   0111111 11111224567788999


Q ss_pred             CEEEEcc
Q 025660           84 TGVLHVA   90 (249)
Q Consensus        84 d~vih~a   90 (249)
                      |+||-+.
T Consensus        71 d~Iiiav   77 (157)
T PF01210_consen   71 DIIIIAV   77 (157)
T ss_dssp             SEEEE-S
T ss_pred             cEEEecc
Confidence            9888443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.07  E-value=0.082  Score=45.48  Aligned_cols=76  Identities=14%  Similarity=0.114  Sum_probs=47.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhH-HHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGF-DAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~-~~~~~~   82 (249)
                      .+.+|+|+|+ |.+|...++.+...|.+|++++|+..     ..++.+.++++.     ...+  |..+.+.. .+....
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~-----~~~~~~~~~~~G-----a~~v--~~~~~~~~~~~~~~~  238 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDP-----PDPKADIVEELG-----ATYV--NSSKTPVAEVKLVGE  238 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCC-----CHHHHHHHHHcC-----CEEe--cCCccchhhhhhcCC
Confidence            3568999985 99999999887788999999998420     114444444431     2222  32221110 112246


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||.+.|.
T Consensus       239 ~d~vid~~g~  248 (355)
T cd08230         239 FDLIIEATGV  248 (355)
T ss_pred             CCEEEECcCC
Confidence            8999999873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.03  E-value=0.024  Score=47.62  Aligned_cols=33  Identities=24%  Similarity=0.332  Sum_probs=30.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+|.| +|-+|..++..|.+.|++|++++|+.
T Consensus         1 m~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~   33 (304)
T PRK06522          1 MKIAILG-AGAIGGLFGAALAQAGHDVTLVARRG   33 (304)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCh
Confidence            3699999 58999999999999999999999976

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.00  E-value=0.02  Score=48.33  Aligned_cols=72  Identities=18%  Similarity=0.217  Sum_probs=51.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE-----cCCCChhhHHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH-----ADLSHPDGFDAAI   80 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~Dl~~~~~~~~~~   80 (249)
                      ++|.|.| +|-=|++|+..|.++||+|+++.|++        +....+.+..   .+..++.     ..+.-..++.+++
T Consensus         2 ~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~~--------~~~~~i~~~~---~N~~yLp~i~lp~~l~at~Dl~~a~   69 (329)
T COG0240           2 MKIAVIG-AGSWGTALAKVLARNGHEVRLWGRDE--------EIVAEINETR---ENPKYLPGILLPPNLKATTDLAEAL   69 (329)
T ss_pred             ceEEEEc-CChHHHHHHHHHHhcCCeeEEEecCH--------HHHHHHHhcC---cCccccCCccCCcccccccCHHHHH
Confidence            5799999 56689999999999999999999998        5555554331   1222322     2333345788888


Q ss_pred             cCCCEEEEc
Q 025660           81 AGCTGVLHV   89 (249)
Q Consensus        81 ~~~d~vih~   89 (249)
                      +++|+|+-.
T Consensus        70 ~~ad~iv~a   78 (329)
T COG0240          70 DGADIIVIA   78 (329)
T ss_pred             hcCCEEEEE
Confidence            888888744

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.98  E-value=0.1  Score=44.12  Aligned_cols=36  Identities=22%  Similarity=0.170  Sum_probs=31.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .+.+++|.|++|.+|..+++.+...|.+|+++++++
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~  174 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSD  174 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcH
Confidence            356899999999999999998888899999988876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK10537 voltage-gated potassium channel; Provisional

Probab=95.98  E-value=0.027  Score=49.20  Aligned_cols=69  Identities=19%  Similarity=0.182  Sum_probs=51.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~   83 (249)
                      +++++|.| .|-+|+.++++|.++|.+|++++.+.        .  +..     ...+..++.||.+|++.++++ ++++
T Consensus       240 k~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~--------~--~~~-----~~~g~~vI~GD~td~e~L~~AgI~~A  303 (393)
T PRK10537        240 KDHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLG--------L--EHR-----LPDDADLIPGDSSDSAVLKKAGAARA  303 (393)
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHCCCCEEEEECch--------h--hhh-----ccCCCcEEEeCCCCHHHHHhcCcccC
Confidence            45799998 57799999999999999998887543        1  111     112457899999999988776 4678


Q ss_pred             CEEEEc
Q 025660           84 TGVLHV   89 (249)
Q Consensus        84 d~vih~   89 (249)
                      +.|+-+
T Consensus       304 ~aVI~~  309 (393)
T PRK10537        304 RAILAL  309 (393)
T ss_pred             CEEEEc
Confidence            888743

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.97  E-value=0.013  Score=50.16  Aligned_cols=66  Identities=15%  Similarity=0.058  Sum_probs=47.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|.|.| .|.||+.+++.|...|.+|++.+|..        .... ....     ..        ...++.++++++
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~--------~~~~-~~~~-----~~--------~~~~l~ell~~a  205 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTR--------KPEA-EKEL-----GA--------EYRPLEELLRES  205 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCC--------Chhh-HHHc-----CC--------EecCHHHHHhhC
Confidence            468999999 69999999999999999999998875        1110 0000     00        123577888899


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|+.+.-.
T Consensus       206 DiV~l~lP~  214 (333)
T PRK13243        206 DFVSLHVPL  214 (333)
T ss_pred             CEEEEeCCC
Confidence            998877754

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.96  E-value=0.037  Score=41.06  Aligned_cols=56  Identities=16%  Similarity=0.138  Sum_probs=46.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|+|.|.+.-+|+.++..|.++|..|+...++.                                  .++++.++++
T Consensus        27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t----------------------------------~~l~~~v~~A   72 (140)
T cd05212          27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT----------------------------------IQLQSKVHDA   72 (140)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC----------------------------------cCHHHHHhhC
Confidence            578999999999999999999999999998886544                                  1355677889


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+||-..+..
T Consensus        73 DIVvsAtg~~   82 (140)
T cd05212          73 DVVVVGSPKP   82 (140)
T ss_pred             CEEEEecCCC
Confidence            9999777754

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.94  E-value=0.046  Score=43.32  Aligned_cols=36  Identities=25%  Similarity=0.345  Sum_probs=31.2

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..+++|||+|| |-+|...++.|++.|++|+++++..
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            35689999995 8899999999999999999997653

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.92  E-value=0.23  Score=44.76  Aligned_cols=76  Identities=18%  Similarity=0.036  Sum_probs=49.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|+|+|+ |++|.++++.|.++|++|++++++..+   ......+.+++.     +++++.++-..      ....+
T Consensus        15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~---~~~~~~~~l~~~-----gv~~~~~~~~~------~~~~~   79 (480)
T PRK01438         15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDE---RHRALAAILEAL-----GATVRLGPGPT------LPEDT   79 (480)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh---hhHHHHHHHHHc-----CCEEEECCCcc------ccCCC
Confidence            3568999995 779999999999999999999876510   000111223222     45666554322      23468


Q ss_pred             CEEEEccccCC
Q 025660           84 TGVLHVATPVD   94 (249)
Q Consensus        84 d~vih~a~~~~   94 (249)
                      |.||...|..+
T Consensus        80 D~Vv~s~Gi~~   90 (480)
T PRK01438         80 DLVVTSPGWRP   90 (480)
T ss_pred             CEEEECCCcCC
Confidence            99999888754

>PRK08818 prephenate dehydrogenase; Provisional

Probab=95.92  E-value=0.032  Score=48.35  Aligned_cols=36  Identities=19%  Similarity=0.278  Sum_probs=31.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~   39 (249)
                      ..++|.|+|.+|.||..+++.|-+. +++|+++++..
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d   39 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPAD   39 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCc
Confidence            4569999999999999999999875 78999988753

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.91  E-value=0.1  Score=44.01  Aligned_cols=75  Identities=21%  Similarity=0.313  Sum_probs=48.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH-cCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI-AGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~   83 (249)
                      ..+|||.|++|.+|..+++.+...|.+|+++++++        ++.+.+.++..    -.++..+-...+.+.++- .++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~--------~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~  214 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKA--------DAADYLKKLGA----KEVIPREELQEESIKPLEKQRW  214 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCH--------HHHHHHHHcCC----CEEEcchhHHHHHHHhhccCCc
Confidence            35899999999999999999888999999998887        55555544321    112211111123333332 247


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |.|+++.+
T Consensus       215 d~vld~~g  222 (326)
T cd08289         215 AGAVDPVG  222 (326)
T ss_pred             CEEEECCc
Confidence            89988776

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.90  E-value=0.019  Score=49.05  Aligned_cols=64  Identities=17%  Similarity=0.096  Sum_probs=47.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|.|.| .|.||+.+++.|...|++|++.+|+.        ....            ..    +.-..++.++++++
T Consensus       145 ~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~--------~~~~------------~~----~~~~~~l~ell~~a  199 (330)
T PRK12480        145 KNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYP--------NKDL------------DF----LTYKDSVKEAIKDA  199 (330)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCh--------hHhh------------hh----hhccCCHHHHHhcC
Confidence            457899998 79999999999999999999999876        1100            00    01123577888899


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|+.+...
T Consensus       200 DiVil~lP~  208 (330)
T PRK12480        200 DIISLHVPA  208 (330)
T ss_pred             CEEEEeCCC
Confidence            988866653

>PRK14851 hypothetical protein; Provisional

Probab=95.87  E-value=0.15  Score=47.89  Aligned_cols=83  Identities=17%  Similarity=0.270  Sum_probs=53.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------cc----CCchhhh----hhccCCCCCCCeEEEEc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------EH----RNSKDLS----FLKNLPGASERLRIFHA   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~~----~~~~~~~----~l~~~~~~~~~~~~~~~   68 (249)
                      ..+|+|.| .|++|+.+++.|...|. +++++|.+.-+.       ..    -...|.+    .+.++. ...+++.+..
T Consensus        43 ~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~in-P~~~I~~~~~  120 (679)
T PRK14851         43 EAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSIN-PFLEITPFPA  120 (679)
T ss_pred             cCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhC-CCCeEEEEec
Confidence            46899999 77799999999999996 777776532100       00    0111111    122222 2345667777


Q ss_pred             CCCChhhHHHHHcCCCEEEEcc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVA   90 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a   90 (249)
                      .++ .+.+.++++++|+||.+.
T Consensus       121 ~i~-~~n~~~~l~~~DvVid~~  141 (679)
T PRK14851        121 GIN-ADNMDAFLDGVDVVLDGL  141 (679)
T ss_pred             CCC-hHHHHHHHhCCCEEEECC
Confidence            775 456788899999999655

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=95.87  E-value=0.017  Score=48.99  Aligned_cols=38  Identities=29%  Similarity=0.467  Sum_probs=33.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |-++.++|+|.| +|-||..++..|.+.|++|+++.|+.
T Consensus         1 ~~~~~m~I~IiG-~GaiG~~lA~~L~~~g~~V~~~~r~~   38 (313)
T PRK06249          1 MDSETPRIGIIG-TGAIGGFYGAMLARAGFDVHFLLRSD   38 (313)
T ss_pred             CCCcCcEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence            555667999997 78899999999999999999999975

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.86  E-value=0.043  Score=49.51  Aligned_cols=43  Identities=16%  Similarity=0.070  Sum_probs=36.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL   56 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~   56 (249)
                      +.+|+|+| .|-+|...+..+...|.+|+++++++        ++.+..+++
T Consensus       165 g~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~--------~rle~aesl  207 (509)
T PRK09424        165 PAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRP--------EVAEQVESM  207 (509)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHc
Confidence            57899999 78899999999999999999999988        666655554

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.85  E-value=0.015  Score=44.63  Aligned_cols=76  Identities=21%  Similarity=0.151  Sum_probs=50.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCC--------------
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL--------------   70 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl--------------   70 (249)
                      ..+|+|+| +|.+|...++.|...|++|+.++...        .....+.....     ..+..+.              
T Consensus        20 p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~--------~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~   85 (168)
T PF01262_consen   20 PAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERP--------ERLRQLESLGA-----YFIEVDYEDHLERKDFDKADY   85 (168)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSH--------HHHHHHHHTTT-----EESEETTTTTTTSB-CCHHHC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCH--------HHHHhhhcccC-----ceEEEcccccccccccchhhh
Confidence            46899998 89999999999999999999999876        55554444321     2222321              


Q ss_pred             -----CChhhHHHHHcCCCEEEEccccCC
Q 025660           71 -----SHPDGFDAAIAGCTGVLHVATPVD   94 (249)
Q Consensus        71 -----~~~~~~~~~~~~~d~vih~a~~~~   94 (249)
                           .....+.+.++..|+||.++-...
T Consensus        86 ~~~~~~~~~~f~~~i~~~d~vI~~~~~~~  114 (168)
T PF01262_consen   86 YEHPESYESNFAEFIAPADIVIGNGLYWG  114 (168)
T ss_dssp             HHHCCHHHHHHHHHHHH-SEEEEHHHBTT
T ss_pred             hHHHHHhHHHHHHHHhhCcEEeeecccCC
Confidence                 112346666667899998776543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=95.84  E-value=0.033  Score=46.83  Aligned_cols=31  Identities=39%  Similarity=0.480  Sum_probs=28.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEc
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR   37 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   37 (249)
                      |+|+|.| +|.+|..++..|.+.|++|++++|
T Consensus         1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r   31 (305)
T PRK12921          1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR   31 (305)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec
Confidence            3799998 788999999999999999999999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	249
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		1e-72
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		1e-51
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		5e-43
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		4e-18
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		2e-17
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		1e-04
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		2e-04

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  268 bits (686), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 124/217 (57%), Positives = 167/217 (76%), Gaps = 4/217 (1%)
Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           KGRVCVTGGTGF+ SW+I  LL++GYSV TT+R+  DPE +  +D+SFL NLPGASE+L 
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRA--DPERK--RDVSFLTNLPGASEKLH 56
Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
            F+ADLS+PD F AAI GC G+ H A+P+DF   EPEE++T+R ++G LGILK+C+ S T
Sbjct: 57  FFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116
Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           VKR +YTSS +AV +N KD D++DE+ WSDVD +R +  +G +YA+SKTL E+A LEF E
Sbjct: 117 VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGE 176
Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           ++G+D+VTLI   +VG F+CPK   S+  +L L+LG 
Sbjct: 177 QNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGK 213

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  199 bits (507), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/216 (47%), Positives = 144/216 (66%), Gaps = 9/216 (4%)
Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+MRLL+ GY+V  TVR   DP   N K +  L +LP A   L ++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVR---DP--TNVKKVKHLLDLPKAETHLTLWK 62
Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GCTGV HVATP+DFE K+PE  + +  I G LGI+KSC  + TV+R
Sbjct: 63  ADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRR 122
Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAALEFAEE 185
           +V+TSS   V   +  + + DE+ WSD+++ R  K+ +W   Y +SKTL E+AA ++A+E
Sbjct: 123 LVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW--MYFVSKTLAEQAAWKYAKE 180
Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
           + +D +T+IP++VVGPFI      S+ ++L+ I GN
Sbjct: 181 NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN 216

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  171 bits (432), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 97/222 (43%), Positives = 140/222 (63%), Gaps = 12/222 (5%)
Query: 4   GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           GK   CV GGTGF+AS L+  LL  GY+V TTVR   DP+  N K +S L  L    + L
Sbjct: 8   GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR---DPD--NQKKVSHLLELQELGD-L 61
Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
           +IF ADL+    F+A IAGC  V HVATPV F  ++PE  + + AI G + ++K+C ++ 
Sbjct: 62  KIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAK 121
Query: 124 TVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAA 179
           +VKRV+ TSS AAV  N  D    ++DE  W+D++++   K  +WG  Y  SKTL E+AA
Sbjct: 122 SVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWG--YPASKTLAEKAA 179
Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN 221
            +FAEE+ +DL+T+IP+++ G  +      S+  +++LI GN
Sbjct: 180 WKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGN 221

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 127/276 (46%), Gaps = 44/276 (15%)
Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTG  GF+AS ++ +LL+HGY V  T RS     +   +   +    PG  E   +  
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR---WDAKYPGRFETAVV-- 68
Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            D+     +D  I G  GV H+A+ V F +K  +EV+T  AI GTL  L++   + +VKR
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKY-DEVVTP-AIGGTLNALRAAAATPSVKR 126
Query: 128 VVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKS--------YAISKTLTER 177
            V TSS  +      +V+   +DE  W +++ I K  +  +S        YA SKT  E 
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEAEL 185
Query: 178 AALEFAEEHG--LDLVTLIPSMVVGPFICPK-------------FAGSVRSSLALI---- 218
           AA +F +E+     L  ++P+  +G    P+             F G V  +LAL+    
Sbjct: 186 AAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY 245
Query: 219 ------LGNVKLKICCVMNRSHTLFVYAIAFAFAFN 248
                 +G + L  C V+ +     VY  A  F +N
Sbjct: 246 YVSAVDIGLLHLG-CLVLPQIERRRVYGTAGTFDWN 280

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 125/276 (45%), Gaps = 44/276 (15%)
Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTG  GF+AS ++ +LL+HGY V  T RS     +   +   +    PG  E   +  
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR---WDAKYPGRFETAVV-- 68
Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            D      +D  I G  GV H+A+ V F +K  +EV+T  AI GTL  L++   + +VKR
Sbjct: 69  EDXLKQGAYDEVIKGAAGVAHIASVVSFSNKY-DEVVTP-AIGGTLNALRAAAATPSVKR 126
Query: 128 VVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKS--------YAISKTLTER 177
            V TSS  +      +V+   +DE  W +++ I K  +  +S        YA SKT  E 
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEAEL 185
Query: 178 AALEFAEEHG--LDLVTLIPSMVVGPFICPK-------------FAGSVRSSLALI---- 218
           AA +F +E+     L  ++P+  +G    P+             F G V  +LAL     
Sbjct: 186 AAWKFXDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWXXSLFNGEVSPALALXPPQY 245
Query: 219 ------LGNVKLKICCVMNRSHTLFVYAIAFAFAFN 248
                 +G + L  C V+ +     VY  A  F +N
Sbjct: 246 YVSAVDIGLLHLG-CLVLPQIERRRVYGTAGTFDWN 280

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 80/207 (38%), Gaps = 26/207 (12%)
Query: 7   RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPG-----AS 60
           R+ VTGG GFI S  + +LL   Y  V       LD        L++  N        A 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLD-------SLTYAGNRANLAPVDAD 54
Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDK-EPEEVITQRAINGTLGILKSC 119
            RLR  H D+         + G   ++H A     +       V T+  + GT  +L+  
Sbjct: 55  PRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCA 114
Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
           + +G V RVV+ S+N            +D   W++   +         YA SK  ++  A
Sbjct: 115 VDAG-VGRVVHVSTNQV-------YGSIDSGSWTESSPLEP----NSPYAASKAGSDLVA 162
Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPK 206
             +   +GLD+         GP+  P+
Sbjct: 163 RAYHRTYGLDVRITRCCNNYGPYQHPE 189

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 81/207 (39%), Gaps = 26/207 (12%)
Query: 7   RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPG-----AS 60
           R+ VTGG GFI S  + +LL   Y  V       LD        L++  N        A 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLD-------SLTYAGNRANLAPVDAD 54
Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDK-EPEEVITQRAINGTLGILKSC 119
            RLR  H D+         + G   ++H A     +       V T+  + GT  +L+  
Sbjct: 55  PRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCA 114
Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
           + +G V RVV+ S+       D+    +D   W++   +         YA SK  ++  A
Sbjct: 115 VDAG-VGRVVHVST-------DEVYGSIDSGSWTESSPLEP----NSPYAASKAGSDLVA 162
Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPK 206
             +   +GLD+         GP+  P+
Sbjct: 163 RAYHRTYGLDVRITRCCNNYGPYQHPE 189

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	249
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-114
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-110
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-104
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-85
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-48
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	9e-48
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	3e-25
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	4e-24
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	9e-22
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	1e-18
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	2e-17
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-17
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	5e-17
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-16
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	3e-16
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	7e-16
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	9e-16
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-15
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-15
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-15
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	4e-15
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	6e-15
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-14
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	3e-14
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	3e-14
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	5e-14
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	2e-13
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-13
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-13
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-12
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	3e-12
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-11
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-11
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-11
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	3e-11
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	9e-11
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	1e-10
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	2e-10
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	3e-10
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	4e-10
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	5e-10
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	6e-10
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	7e-10
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-09
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	5e-09
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	8e-09
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	2e-08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-07
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-07
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	6e-07
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	6e-07
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	8e-07
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-06
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	3e-06
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	3e-06
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	3e-05
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	2e-04
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	5e-04
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	7e-04

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  328 bits (843), Expect = e-114
 Identities = 121/219 (55%), Positives = 166/219 (75%), Gaps = 4/219 (1%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           KGRVCVTGGTGF+ SW+I  LL++GYSV TT+R++ +      +D+SFL NLPGASE+L 
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPE----RKRDVSFLTNLPGASEKLH 56

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
            F+ADLS+PD F AAI GC G+ H A+P+DF   EPEE++T+R ++G LGILK+C+ S T
Sbjct: 57  FFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           VKR +YTSS +AV +N KD D++DE+ WSDVD +R +  +G +YA+SKTL E+A LEF E
Sbjct: 117 VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGE 176

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK 223
           ++G+D+VTLI   +VG F+CPK   S+  +L L+LG  +
Sbjct: 177 QNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKE 215

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  319 bits (820), Expect = e-110
 Identities = 98/223 (43%), Positives = 139/223 (62%), Gaps = 5/223 (2%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M      VCVTG +GFI SWL+MRLL+ GY+V  TVR   +      K +  L +LP A 
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNV-----KKVKHLLDLPKAE 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
             L ++ ADL+    FD AI GCTGV HVATP+DFE K+PE  + +  I G LGI+KSC 
Sbjct: 56  THLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCA 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            + TV+R+V+TSS   V   +  + + DE+ WSD+++ R        Y +SKTL E+AA 
Sbjct: 116 AAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAW 175

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK 223
           ++A+E+ +D +T+IP++VVGPFI      S+ ++L+ I GN  
Sbjct: 176 KYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA 218

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  305 bits (784), Expect = e-104
 Identities = 92/226 (40%), Positives = 134/226 (59%), Gaps = 8/226 (3%)

Query: 2   EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
             GK   CV GGTGF+AS L+  LL  GY+V TTVR   +      K +S L  L    +
Sbjct: 6   PIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQ-----KKVSHLLELQELGD 60

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
            L+IF ADL+    F+A IAGC  V HVATPV F  ++PE  + + AI G + ++K+C +
Sbjct: 61  -LKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTR 119

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
           + +VKRV+ TSS AAV  N  D    ++DE  W+D++++         Y  SKTL E+AA
Sbjct: 120 AKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAA 179

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK 225
            +FAEE+ +DL+T+IP+++ G  +      S+  +++LI GN  L 
Sbjct: 180 WKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLI 225

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  256 bits (657), Expect = 2e-85
 Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 21/236 (8%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           + EG   V VTG  GF+AS ++ +LL+HGY V  T RS     +     L    +     
Sbjct: 8   LPEGS-LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-----LQKRWDAKYPG 61

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
                   D+     +D  I G  GV H+A+ V F +K  +EV+T  AI GTL  L++  
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKY-DEVVTP-AIGGTLNALRAAA 119

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKS-------YAIS 171
            + +VKR V TSS  +      +V+   +DE  W+     +               YA S
Sbjct: 120 ATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAAS 179

Query: 172 KTLTERAALEFAEEHG--LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK 225
           KT  E AA +F +E+     L  ++P+  +G    P+      S+   ++     +
Sbjct: 180 KTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSG--STSGWMMSLFNGE 233

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  162 bits (411), Expect = 2e-48
 Identities = 44/195 (22%), Positives = 73/195 (37%), Gaps = 22/195 (11%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +  V G TG +       +   G+ +    R         S  +  L  L          
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVLIHRP--------SSQIQRLAYLE-----PECR 61

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
            A++    G + A+ G  GV+  A       +  +E +   A+  T     +CL++  V 
Sbjct: 62  VAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEV-ASALGQTNPFYAACLQAR-VP 119

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           R++Y  S  A+  + + +    E  + D      L S   SY + K   +  A E A   
Sbjct: 120 RILYVGSAYAMPRHPQGLP-GHEGLFYD-----SLPSGKSSYVLCKWALDEQAREQARN- 172

Query: 187 GLDLVTLIPSMVVGP 201
           GL +V  IP MV+G 
Sbjct: 173 GLPVVIGIPGMVLGE 187

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  156 bits (397), Expect = 9e-48
 Identities = 43/201 (21%), Positives = 74/201 (36%), Gaps = 33/201 (16%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME+ K ++ + G +GF+ S L+   L+ G+ VT  VR    PE            +   +
Sbjct: 1   MEKVK-KIVLIGASGFVGSALLNEALNRGFEVTAVVR---HPE-----------KIKIEN 45

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E L++  AD+S  D       G   V+    P  + + +  +      I   L I+    
Sbjct: 46  EHLKVKKADVSSLDEVCEVCKGADAVISAFNPG-WNNPDIYDE----TIKVYLTIIDGVK 100

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           K+G V R +      ++F     + +MD     +                 K L E    
Sbjct: 101 KAG-VNRFLMVGGAGSLFIAP-GLRLMDSGEVPE-----------NILPGVKALGEFYLN 147

Query: 181 EFAEEHGLDLVTLIPSMVVGP 201
              +E  +D V   P+  + P
Sbjct: 148 FLMKEKEIDWVFFSPAADMRP 168

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 99.4 bits (248), Expect = 3e-25
 Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 32/196 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R+ VTG  G +   +  RL      +     S LDP                        
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAG----------------PNEECV 48

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA-TPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             DL+  +  +A +AGC G++H+    V+    +P E I Q  I G   + ++    G  
Sbjct: 49  QCDLADANAVNAMVAGCDGIVHLGGISVE----KPFEQILQGNIIGLYNLYEAARAHG-Q 103

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
            R+V+ SSN         +    +T     D   + D     Y +SK   E  A  + ++
Sbjct: 104 PRIVFASSNHT-------IGYYPQTERLGPDVPARPDG---LYGVSKCFGENLARMYFDK 153

Query: 186 HGLDLVTLIPSMVVGP 201
            G +   +        
Sbjct: 154 FGQETALVRIGSCTPE 169

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 96.6 bits (241), Expect = 4e-24
 Identities = 37/196 (18%), Positives = 65/196 (33%), Gaps = 32/196 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R+ VTG  G + S +   L    + V  +    +D                       I 
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDI--VDLGAAE--------------AHEEIV 47

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA-TPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             DL+        +  C G++H+    V+     P   I Q  I G   + ++    G  
Sbjct: 48  ACDLADAQAVHDLVKDCDGIIHLGGVSVE----RPWNDILQANIIGAYNLYEAARNLG-K 102

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
            R+V+ SSN  + Y  +           D +  R+ DS    Y +SK   E  A  +  +
Sbjct: 103 PRIVFASSNHTIGYYPRTT-------RIDTEVPRRPDS---LYGLSKCFGEDLASLYYHK 152

Query: 186 HGLDLVTLIPSMVVGP 201
             ++ + +        
Sbjct: 153 FDIETLNIRIGSCFPK 168

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 91.6 bits (228), Expect = 9e-22
 Identities = 48/221 (21%), Positives = 78/221 (35%), Gaps = 25/221 (11%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
            V V GG GF+ S L+ RLL+ G +    V   +D       +L      N+P     +R
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGVN---QVHV-VD-------NLLSAEKINVPD-HPAVR 81

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSCLKS 122
                ++      +       V H+AT         +P     +     TL + +     
Sbjct: 82  FSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADH-ENNTLTTLKLYERLKHF 140

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAALE 181
             +K+VVY+++           D         V           S Y++SK   E  ++ 
Sbjct: 141 KRLKKVVYSAA-GCSIAEKTFDDAKATEETDIVSLHNND-----SPYSMSKIFGEFYSVY 194

Query: 182 FAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV 222
           + ++H L  V      V GP      AG  R + A +  NV
Sbjct: 195 YHKQHQLPTVRARFQNVYGPGEILG-AGRWRGTPATVWRNV 234

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 82.3 bits (204), Expect = 1e-18
 Identities = 44/201 (21%), Positives = 72/201 (35%), Gaps = 37/201 (18%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           +V +TG  G I S +   LL+ G  V       +D       + +    ++L      L 
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVVG-----ID-------NFATGRREHLKD-HPNLT 69

Query: 65  IFHADLSHPDGFDAAIAGC--TGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCL 120
                ++     +  I       V+H A        +P++       N  G   ++++  
Sbjct: 70  FVEGSIADHALVNQLIGDLQPDAVVHTAASYK----DPDDWYNDTLTNCVGGSNVVQAAK 125

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           K+  V R VY  + A  +        +              +S   SYAISK+  E    
Sbjct: 126 KNN-VGRFVYFQT-ALCYGVKPIQQPVRLD-----HPRNPANS---SYAISKSANED--- 172

Query: 181 EFAEEHGLDLVTLIPSMVVGP 201
            + E  GLD VT   + VVGP
Sbjct: 173 -YLEYSGLDFVTFRLANVVGP 192

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 79.1 bits (196), Expect = 2e-17
 Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 34/202 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           RV VTGG GFI S ++  LL  G  V       LD       +L+    +N+P   + + 
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAV-----LD-------NLATGKRENVP---KGVP 46

Query: 65  IFHADLSHPDGFDAAIAGC--TGVLHVATPVDFED--KEPEEVITQRA-INGTLGILKSC 119
            F  DL   +G + A      T V H A     +   ++P         + G L +L++C
Sbjct: 47  FFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVL--DFEVNLLGGLNLLEAC 104

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
            + G V+++V+ S+  A++    + +  +E       +  +  S    YA SK   E   
Sbjct: 105 RQYG-VEKLVFASTGGAIYGEVPEGERAEE------TWPPRPKS---PYAASKAAFEHYL 154

Query: 180 LEFAEEHGLDLVTLIPSMVVGP 201
             + + +GL  V+L    V GP
Sbjct: 155 SVYGQSYGLKWVSLRYGNVYGP 176

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 78.5 bits (194), Expect = 2e-17
 Identities = 37/211 (17%), Positives = 80/211 (37%), Gaps = 33/211 (15%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTG +G I + L+  L +             D              +   +  ++   
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIA---SD-------------IVQRDTGGIKFIT 45

Query: 68  ADLSHPDGFDAAIA--GCTGVLHVATPVDFE-DKEPEEVITQRA-INGTLGILKSCLKSG 123
            D+S+ D  D A+       + H+A  +  + +K+P   +  +  +NGT  IL++  +  
Sbjct: 46  LDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPA--LAYKVNMNGTYNILEAAKQHR 103

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            V++VV  S+   VF  +   + +          I +  +    + ++K   E     + 
Sbjct: 104 -VEKVVIPST-IGVFGPETPKNKVPS------ITITRPRT---MFGVTKIAAELLGQYYY 152

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSS 214
           E+ GLD+ +L    ++     P    +  + 
Sbjct: 153 EKFGLDVRSLRYPGIISYKAEPTAGTTDYAV 183

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 78.2 bits (193), Expect = 5e-17
 Identities = 33/194 (17%), Positives = 67/194 (34%), Gaps = 27/194 (13%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
             E   ++ +TG  GFIAS +  RL   G+ V  +             D    +++    
Sbjct: 26  PSENL-KISITGAGGFIASHIARRLKHEGHYVIAS-------------DWKKNEHMTEDM 71

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPV---DFEDKEPEEVITQRAINGTLGILK 117
                   DL   +       G   V ++A  +    F       ++    +  +  +++
Sbjct: 72  FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM-ISFNMIE 130

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET--FWSDVDYIRKLDSWGKSYAISKTLT 175
           +   +G +KR  Y SS A + Y +             SD  +  +       + + K  T
Sbjct: 131 AARING-IKRFFYASS-ACI-YPEFKQLETTNVSLKESDA-WPAEPQDA---FGLEKLAT 183

Query: 176 ERAALEFAEEHGLD 189
           E     + ++ G++
Sbjct: 184 EELCKHYNKDFGIE 197

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 76.4 bits (189), Expect = 1e-16
 Identities = 32/202 (15%), Positives = 67/202 (33%), Gaps = 46/202 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT-----TTVRSELDPE--HRNSKDLSFLKNLPGA 59
           ++ VTGGTGF+  +++  + + G +          ++  D E    +      +  L   
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDV 63

Query: 60  SERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSC 119
                + H          AA             +     E  +         T  +  +C
Sbjct: 64  D---AVVHL---------AATR------GSQGKIS----EFHD-----NEILTQNLYDAC 96

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
            ++  +  +VY S+  +  Y+D+     +E      D +         Y +SK   E   
Sbjct: 97  YENN-ISNIVYAST-ISA-YSDETSLPWNEKELPLPDLM---------YGVSKLACEHIG 144

Query: 180 LEFAEEHGLDLVTLIPSMVVGP 201
             ++ + GL +  L  + + G 
Sbjct: 145 NIYSRKKGLCIKNLRFAHLYGF 166

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 75.9 bits (187), Expect = 3e-16
 Identities = 43/191 (22%), Positives = 71/191 (37%), Gaps = 31/191 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
           RV + G  GFI + L  RLL    Y V       LD                        
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYG-----LDIGSDAISRFL-------NHPHFHF 49

Query: 66  FHADLSHP-DGFDAAIAGCTGVLH---VATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
              D+S   +  +  +  C  VL    +ATP+++  + P  V  +      L I++ C+K
Sbjct: 50  VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT-RNPLRVF-ELDFEENLRIIRYCVK 107

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK---SYAISKTLTERA 178
               KR+++ S++    Y        DE   + +     +    K    Y++SK L +R 
Sbjct: 108 YR--KRIIFPSTSEV--YGMCSDKYFDEDHSNLI-----VGPVNKPRWIYSVSKQLLDRV 158

Query: 179 ALEFAEEHGLD 189
              + E+ GL 
Sbjct: 159 IWAYGEKEGLQ 169

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 75.0 bits (185), Expect = 7e-16
 Identities = 47/204 (23%), Positives = 72/204 (35%), Gaps = 19/204 (9%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           +        +TG  GFI S L+  LL     V           H+ + D           
Sbjct: 23  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVV--GLDNFATGHQRNLDEVRSLVSEKQW 80

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVA--TPVDFEDKEPEEVITQRA-INGTLGILK 117
              +    D+ + D  + A AG   VLH A    V     +P    +    I+G L +L 
Sbjct: 81  SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPIT--SNATNIDGFLNMLI 138

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
           +   +  V+   Y +S ++  Y D       E      D I K  S    YA++K + E 
Sbjct: 139 AARDAK-VQSFTYAAS-SST-YGDHPGLPKVE------DTIGKPLS---PYAVTKYVNEL 186

Query: 178 AALEFAEEHGLDLVTLIPSMVVGP 201
            A  F+  +G   + L    V G 
Sbjct: 187 YADVFSRCYGFSTIGLRYFNVFGR 210

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 74.1 bits (183), Expect = 9e-16
 Identities = 44/215 (20%), Positives = 63/215 (29%), Gaps = 52/215 (24%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           R+ +TGG GFI   L   L+  G  VT      LD       DL    +    G      
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTV-----LD-------DLRVPPMIPPEGT----- 51

Query: 65  IFHADLSHPDGFD---AAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSC 119
                       +     ++    V H+A+   V    K+P +      ++    +L  C
Sbjct: 52  ---GKFLEKPVLELEERDLSDVRLVYHLASHKSVPRSFKQPLD--YLDNVDSGRHLLALC 106

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
              G V +VV  S+   V Y   D     E         R        YA SK   E  A
Sbjct: 107 TSVG-VPKVVVGST-CEV-YGQADTLPTPED---SPLSPRSP------YAASKVGLEMVA 154

Query: 180 LEFAEEHGLDLVTLI-----------PSMVVGPFI 203
                      V ++           P  +V    
Sbjct: 155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLC 189

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 37/191 (19%), Positives = 61/191 (31%), Gaps = 30/191 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            + VTGG GFI S ++  L D G +    V    D     +K      NL   +    + 
Sbjct: 48  MIIVTGGAGFIGSNIVKALNDKGITDILVV----DNLKDGTK----FVNLVDLNIADYMD 99

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA----TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             D                + H      T     D +    +       +  +L  CL+ 
Sbjct: 100 KEDFLIQIMAGEEFGDVEAIFHEGACSSTTE--WDGKY---MMDNNYQYSKELLHYCLER 154

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
                 +Y SS AA  Y  +  D ++       +Y + L+     +  SK L +    + 
Sbjct: 155 E--IPFLYASS-AAT-YGGRTSDFIESR-----EYEKPLN----VFGYSKFLFDEYVRQI 201

Query: 183 AEEHGLDLVTL 193
             E    +V  
Sbjct: 202 LPEANSQIVGF 212

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 71.2 bits (174), Expect = 3e-15
 Identities = 22/195 (11%), Positives = 58/195 (29%), Gaps = 35/195 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + G TG   S ++    + G+ VT  VR   +              +    + + I 
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVR---NAGK-----------ITQTHKDINIL 47

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D+   D   + ++    V+        E ++               ++     +    
Sbjct: 48  QKDIF--DLTLSDLSDQNVVVDAYGISPDEAEKHVT--------SLDHLISVLNGTV-SP 96

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           R++     A++  ++    +++     +  Y     +  K     K          + + 
Sbjct: 97  RLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLK----------SHQA 146

Query: 187 GLDLVTLIPSMVVGP 201
                 + PS +  P
Sbjct: 147 EFSWTYISPSAMFEP 161

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 70.8 bits (174), Expect = 4e-15
 Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 20/141 (14%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + G TG      + + +  GY VT  VR   D     S+                + 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR---DSSRLPSE----------GPRPAHVV 51

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D+      D  +AG   V+ +    +  D  P  V+++ A N    I+ +    G V 
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLGTRN--DLSPTTVMSEGARN----IVAAMKAHG-VD 104

Query: 127 RVVYTSSNAAVFYNDKDVDMM 147
           +VV  +S   ++   K    +
Sbjct: 105 KVVACTSAFLLWDPTKVPPRL 125

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 72.2 bits (178), Expect = 4e-15
 Identities = 50/199 (25%), Positives = 76/199 (38%), Gaps = 34/199 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           R+ VTGG GFI S L+ +L++ GY V       +D       +LS    + +        
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVV-----VD-------NLSSGRREFVN---PSAE 46

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFED--KEPEEVITQRAINGTLGILKSCLKS 122
           +   DL        A      V H A   +      EP        +  T  +L+   ++
Sbjct: 47  LHVRDLKDYSWG--AGIKGDVVFHFAANPEVRLSTTEPIVHF-NENVVATFNVLEWARQT 103

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G V+ VV+ SS + V Y D DV    E      +   K  S    Y  +K   E     +
Sbjct: 104 G-VRTVVFASS-STV-YGDADVIPTPE------EEPYKPIS---VYGAAKAAGEVMCATY 151

Query: 183 AEEHGLDLVTLIPSMVVGP 201
           A   G+  + +  + VVGP
Sbjct: 152 ARLFGVRCLAVRYANVVGP 170

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 72.6 bits (178), Expect = 6e-15
 Identities = 43/215 (20%), Positives = 70/215 (32%), Gaps = 27/215 (12%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTV------RSELDPEHR-----NSKDLSFLKN 55
            V +TG TGF+  +L++ LL     V   +       S+ D   R     +S D   L++
Sbjct: 75  TVLLTGATGFLGRYLVLELLRRL-DVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRH 133

Query: 56  L-PGASERLRIFHADLSHPD-GFDAA-----IAGCTGVLHVATPVDFEDKEPEEVITQRA 108
               A++RL +   D S PD G D             ++  A  V+              
Sbjct: 134 FKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYH-----ELFG 188

Query: 109 IN--GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK 166
            N  GT  +++  L +  +K   Y S+       +      D               W  
Sbjct: 189 PNVAGTAELIRIAL-TTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAG 247

Query: 167 SYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP 201
            Y  SK   E    E  +   L +      M++  
Sbjct: 248 GYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD 282

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 38/190 (20%), Positives = 61/190 (32%), Gaps = 30/190 (15%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTGG GFI S ++  L D G +    V    D     +K      NL   +    +  
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVV----DNLKDGTK----FVNLVDLNIADYMDK 53

Query: 68  ADLSHPDGFDAAIAGCTGVLHVA----TPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
            D                + H      T     D +    +       +  +L  CL+  
Sbjct: 54  EDFLIQIMAGEEFGDVEAIFHEGACSSTTE--WDGKY---MMDNNYQYSKELLHYCLERE 108

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
                +Y SS AA  Y  +  D ++       +Y + L+     Y  SK L +    +  
Sbjct: 109 I--PFLYASS-AAT-YGGRTSDFIESR-----EYEKPLN----VYGYSKFLFDEYVRQIL 155

Query: 184 EEHGLDLVTL 193
            E    +V  
Sbjct: 156 PEANSQIVGF 165

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 41/195 (21%), Positives = 64/195 (32%), Gaps = 17/195 (8%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           +        +TG  GFI S L+ +LL     V           H+ + D           
Sbjct: 21  LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVI--GLDNFSTGHQYNLDEVKTLVSTEQW 78

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKS 118
            R      D+      +  + G   VLH A    V     +P        I G L IL +
Sbjct: 79  SRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTN-ATNITGFLNILHA 137

Query: 119 CLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA 178
              +  V+   Y +S ++  Y D              + I    S    YA++K + E  
Sbjct: 138 AKNAQ-VQSFTYAAS-SST-YGD------HPALPKVEENIGNPLS---PYAVTKYVNEIY 185

Query: 179 ALEFAEEHGLDLVTL 193
           A  +A  +G   + L
Sbjct: 186 AQVYARTYGFKTIGL 200

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 69.8 bits (172), Expect = 3e-14
 Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 34/199 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
            + VTGG GFI S ++ +L +    +       +D       +LS    + +    E  R
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSE-SNEIVV-----ID-------NLSSGNEEFVN---EAAR 46

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           +  ADL+  D     + G   V H+A    V    + P+E+  +  +  T  +L++  K+
Sbjct: 47  LVKADLAADD-IKDYLKGAEEVWHIAANPDVRIGAENPDEIY-RNNVLATYRLLEAMRKA 104

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G V R+V+TS+ + V Y +  V    E      DY     S    Y  SK   E     +
Sbjct: 105 G-VSRIVFTST-STV-YGEAKVIPTPE------DYPTHPIS---LYGASKLACEALIESY 152

Query: 183 AEEHGLDLVTLIPSMVVGP 201
                +       + V+G 
Sbjct: 153 CHTFDMQAWIYRFANVIGR 171

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 69.8 bits (171), Expect = 5e-14
 Identities = 49/217 (22%), Positives = 84/217 (38%), Gaps = 34/217 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF--LKNLPGASERLR 64
           +V + G  GFI   L  R+L+                     D+    L +L    ER+ 
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVF-----GM-------DMQTDRLGDLVK-HERMH 72

Query: 65  IFHADLSHP-DGFDAAIAGCTGVLH---VATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
            F  D++   +  +  +  C  +L    +ATP  +  K+P  V  +      L I++S +
Sbjct: 73  FFEGDITINKEWVEYHVKKCDVILPLVAIATPATYV-KQPLRVF-ELDFEANLPIVRSAV 130

Query: 121 KSGTVKRVVYTSSNAAVF--YNDKDVDMMDETF-WSDVDYIRKLDSWGKSYAISKTLTER 177
           K G  K +V+ S+ + V+    D+  D       +  ++  R    W   YA SK L +R
Sbjct: 131 KYG--KHLVFPST-SEVYGMCADEQFDPDASALTYGPINKPR----W--IYACSKQLMDR 181

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSS 214
               +    GL+     P   +GP +   +     SS
Sbjct: 182 VIWGYG-MEGLNFTLFRPFNWIGPGLDSIYTPKEGSS 217

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 29/172 (16%), Positives = 60/172 (34%), Gaps = 27/172 (15%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M + K  + V G TG   + LI      G+ V   V      +   +++   L+ +P  +
Sbjct: 1   MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH---SLKGLIAEE---LQAIPNVT 54

Query: 61  ERLRIFHADLS-HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSC 119
               +F   L  +    D    G        T       E          +    +  + 
Sbjct: 55  ----LFQGPLLNNVPLMDTLFEGAHLAFINTTS--QAGDE-----IAIGKD----LADAA 99

Query: 120 LKSGTVKRVVYTS-SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAI 170
            ++GT++  +Y+S  + +++     V M     ++  +Y+R+L   G     
Sbjct: 100 KRAGTIQHYIYSSMPDHSLYGPWPAVPMWA-PKFTVENYVRQL---GLPSTF 147

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 43/200 (21%), Positives = 67/200 (33%), Gaps = 38/200 (19%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS-----ELDPEHRNSKDLSFLKNLPGASE 61
            + + G  G +   L  RL+  G      V          PE              G S 
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-----------AGFSG 64

Query: 62  RLRIFHADLSHPDGFDAAI-AGCTGVLHVATPVDFE-DKEPEEVITQRAIN--GTLGILK 117
            +    ADLS P   +  + A    + H+A  V  E + + +       IN  GT  +  
Sbjct: 65  AVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFD---KGYRINLDGTRYLFD 121

Query: 118 SC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKT 173
           +      K G   RVV+TSS  AVF       + DE   + +           SY   K 
Sbjct: 122 AIRIANGKDGYKPRVVFTSS-IAVFGAPLPYPIPDEFHTTPLT----------SYGTQKA 170

Query: 174 LTERAALEFAEEHGLDLVTL 193
           + E    +++     D + +
Sbjct: 171 ICELLLSDYSRRGFFDGIGI 190

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 65.4 bits (160), Expect = 4e-13
 Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 42/195 (21%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + G TG +   L+  L    Y +    R     E         +         ++  
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR---KVEQ--------VPQYNN----VKAV 46

Query: 67  HADLS-HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
           H D+   P+     + G   +++V+       K   +V       G + ++++  K+  V
Sbjct: 47  HFDVDWTPEEMAKQLHGMDAIINVSG---SGGKSLLKVDLY----GAVKLMQAAEKAE-V 98

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
           KR +  S+       +K +    +                K Y I+K   +       +E
Sbjct: 99  KRFILLST-IFSLQPEKWIGAGFDAL--------------KDYYIAKHFADLYLT---KE 140

Query: 186 HGLDLVTLIPSMVVG 200
             LD   + P  +  
Sbjct: 141 TNLDYTIIQPGALTE 155

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 64.3 bits (157), Expect = 1e-12
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 18/130 (13%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           RV V G  G +A +L+  L + G+     VR   + E         L+   GAS+   I 
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVR---NEEQ-----GPELRER-GASD---IV 70

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
            A+L   + F  A A    V+  A        +   +I      G +  ++   K G +K
Sbjct: 71  VANL--EEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLW---GAIKTIQEAEKRG-IK 124

Query: 127 RVVYTSSNAA 136
           R +  SS   
Sbjct: 125 RFIMVSSVGT 134

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 64.0 bits (156), Expect = 3e-12
 Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 23/138 (16%)

Query: 13  GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH 72
           G G +   L  RL   G+ VT   RS                        ++   AD++ 
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRSA-----------------QPMPAGVQTLIADVTR 52

Query: 73  PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS 132
           PD   + +     +L             +E      + G    L + L+   ++ V + S
Sbjct: 53  PDTLASIVHLRPEILVYCVAASEYS---DEHYRLSYVEGLRNTLSA-LEGAPLQHVFFVS 108

Query: 133 SNAAVFYNDKDVDMMDET 150
           S   V Y  +  + +DE 
Sbjct: 109 S-TGV-YGQEVEEWLDED 124

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 61.8 bits (150), Expect = 1e-11
 Identities = 23/149 (15%), Positives = 45/149 (30%), Gaps = 31/149 (20%)

Query: 4   GKGRVCVTGGTGFIASWLIMRLLD--HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
               V VTG +G     +  +L +    +     VRS               + + G ++
Sbjct: 3   NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA-----------QGKEKIGGEAD 51

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN----------- 110
              +F  D++  D  + A  G   ++ + + V       +     R              
Sbjct: 52  ---VFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQV 108

Query: 111 ---GTLGILKSCLKSGTVKRVVYTSSNAA 136
              G    + +   +G VK +V   S   
Sbjct: 109 DWIGQKNQIDAAKVAG-VKHIVVVGSMGG 136

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 61.2 bits (148), Expect = 1e-11
 Identities = 20/195 (10%), Positives = 46/195 (23%), Gaps = 32/195 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ V G TG   S ++      G+ V   VR   DP+                     + 
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVR---DPQK------------AADRLGATVA 46

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
                     +A +     V+   +      +    +     +        S L++    
Sbjct: 47  TLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLV-------SLLRNSDTL 99

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
            V    S +          ++D              +  + +                  
Sbjct: 100 AVFILGSASLAMPGADHPMILDFP----------ESAASQPWYDGALYQYYEYQFLQMNA 149

Query: 187 GLDLVTLIPSMVVGP 201
            ++ + + PS     
Sbjct: 150 NVNWIGISPSEAFPS 164

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 26/193 (13%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELD-----PEHRNSKDLSFLKNLPGASE 61
            + +TGG GF+ S L     ++       V   LD         N++  S          
Sbjct: 12  TILITGGAGFVGSNLAFHFQENHPKAKVVV---LDKFRSNTLFSNNRPSSLGHFKNLIGF 68

Query: 62  RLRIFHADLSHP-DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           +  +  AD+++P D           + H A   D      E V+ +      L +L+   
Sbjct: 69  KGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVM-KTNYQAFLNLLEIAR 127

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
                 +V+Y SS A V Y +       +            +     Y  SK   +    
Sbjct: 128 SKK--AKVIYASS-AGV-YGN------TKAPNVVGKNESPEN----VYGFSKLCMDEFV- 172

Query: 181 EFAEEHGLDLVTL 193
             +  +    V L
Sbjct: 173 -LSHSNDNVQVGL 184

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 47/205 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           R+ +TGG G + S LI   L  G+ +       +D       + +    + LP     L 
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILV-----ID-------NFATGKREVLP-PVAGLS 68

Query: 65  IFHADLSHPDGFDAAIAGC--TGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCL 120
           +    ++     + A      T V+H A       K+P++     A N  G++ + K+  
Sbjct: 69  VIEGSVTDAGLLERAFDSFKPTHVVHSAAAY----KDPDDWAEDAATNVQGSINVAKAAS 124

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETF----WSDVDYIRKLDSWGKSYAISKTLTE 176
           K+G VKR++   + A   Y       +        ++             SY ISKT  E
Sbjct: 125 KAG-VKRLLNFQT-ALC-YGRPATVPIPIDSPTAPFT-------------SYGISKTAGE 168

Query: 177 RAALEFAEEHGLDLVTLIPSMVVGP 201
                F     + +V+L  + V GP
Sbjct: 169 A----FLMMSDVPVVSLRLANVTGP 189

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 60.1 bits (146), Expect = 9e-11
 Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 44/222 (19%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVT-----TTVRSELDPEHRNSKDLSFLKN 55
           ME+ + R+ +TGG GF+ S L  +L+  G+ VT      T R               +++
Sbjct: 23  MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN------------VEH 70

Query: 56  LPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRA-INGTLG 114
             G  E   + + D+  P   +        + H+A+P    +     + T +    GTL 
Sbjct: 71  WIG-HENFELINHDVVEPLYIE-----VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLN 124

Query: 115 ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTL 174
           +L    + G   R++  S++    Y D +V    E +W  V+ I         Y   K +
Sbjct: 125 MLGLAKRVG--ARLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGP--RA--CYDEGKRV 176

Query: 175 TERAALEFAEEHGLDLV------TLIPSM------VVGPFIC 204
            E     + ++ G+++       T  P M      VV  FI 
Sbjct: 177 AETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFIL 218

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 22/128 (17%), Positives = 37/128 (28%), Gaps = 28/128 (21%)

Query: 7   RVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
            V + G  G IA  +I +L D      T   R    P   +                 +I
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFAR---QPAKIHKP----------YPTNSQI 71

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
              D+ +      A+ G   V    T  D +                  ++ +      V
Sbjct: 72  IMGDVLNHAALKQAMQGQDIVYANLTGEDLDI-------------QANSVIAAMKACD-V 117

Query: 126 KRVVYTSS 133
           KR+++  S
Sbjct: 118 KRLIFVLS 125

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 52/224 (23%)

Query: 8   VCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           V V GGTG     +   LL+ G + V    R   +P  + +K+L     L GA     + 
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTR---NPRKKAAKELR----LQGAE----VV 56

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D       + A+ G      V    +   +E E    +   +          + G + 
Sbjct: 57  QGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLAD-------LARRLG-LH 108

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL--DSWGKSYAISKTLTERAALEFAE 184
            VVY+                       ++ I+KL       ++   K   E    E+  
Sbjct: 109 YVVYSG----------------------LENIKKLTAGRLAAAHFDGKGEVE----EYFR 142

Query: 185 EHGLDLVTLIP----SMVVGPFICPKFAGSVRSSLALILGNVKL 224
           + G+ + ++        ++  F+  K        L+L  G+V +
Sbjct: 143 DIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPM 186

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 58.9 bits (143), Expect = 3e-10
 Identities = 48/201 (23%), Positives = 76/201 (37%), Gaps = 27/201 (13%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
           RV + G  GFI + L  RLL    Y V       LD                        
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYG-----LDIGSDAISRFL-------NHPHFHF 364

Query: 66  FHADLS-HPDGFDAAIAGCTGVLH---VATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
              D+S H +  +  +  C  VL    +ATP+++  + P  V         L I++ C+K
Sbjct: 365 VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEY-TRNPLRVFELDFE-ENLRIIRYCVK 422

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV-DYIRKLDSWGKSYAISKTLTERAAL 180
               KR+++ S++    Y        DE   + +   + K   W   Y++SK L +R   
Sbjct: 423 YR--KRIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNK-PRW--IYSVSKQLLDRVIW 475

Query: 181 EFAEEHGLDLVTLIPSMVVGP 201
            + E+ GL      P   +GP
Sbjct: 476 AYGEKEGLQFTLFRPFNWMGP 496

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 32/210 (15%), Positives = 66/210 (31%), Gaps = 32/210 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
           ++ + G  G I + L  +L   +G             E+  + D+  L            
Sbjct: 4   KILIIGACGQIGTELTQKLRKLYGT------------ENVIASDIRKLN--TDVVNSGPF 49

Query: 66  FHADLSHPDGFDAAIA--GCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
              +    +  +  +     T +  +A       E K P        +N    +L     
Sbjct: 50  EVVNALDFNQIEHLVEVHKITDIYLMAALLSATAE-KNPAFAW-DLNMNSLFHVLNLAKA 107

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
              +K++ + SS  AVF      +   +        I +  +    Y ISK   ER    
Sbjct: 108 KK-IKKIFWPSS-IAVFGPTTPKENTPQ------YTIMEPST---VYGISKQAGERWCEY 156

Query: 182 FAEEHGLDLVTLIPSMVVGPFICPKFAGSV 211
           +   +G+D+ ++    ++     P    + 
Sbjct: 157 YHNIYGVDVRSIRYPGLISWSTPPGGGTTD 186

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 57.6 bits (139), Expect = 5e-10
 Identities = 31/220 (14%), Positives = 64/220 (29%), Gaps = 60/220 (27%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            + +TG  GF+   L   L          V  +   E                       
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEE---------------------- 39

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
                     ++A+     ++H+A     E    +E      ++    +L    ++    
Sbjct: 40  ---------LESALLKADFIVHLAGVNRPEH--DKEFS-LGNVSYLDHVLDILTRNTKKP 87

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
            ++ +SS  A                         D+    Y  SK   E+   E+AEE+
Sbjct: 88  AILLSSSIQA-----------------------TQDN---PYGESKLQGEQLLREYAEEY 121

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI 226
           G  +       + G +  P +   + +    I  N ++++
Sbjct: 122 GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV 161

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 57.4 bits (138), Expect = 6e-10
 Identities = 30/201 (14%), Positives = 56/201 (27%), Gaps = 31/201 (15%)

Query: 10  VTGGTGFIASWLIMRLLDHGYS-----VTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           + G TG I + L   L           V    R      H                  + 
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH--------------EDNPIN 51

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG- 123
               D+S PD   A ++  T V HV     + ++  E+   +        +L + + +  
Sbjct: 52  YVQCDISDPDDSQAKLSPLTDVTHVFYVT-WANRSTEQENCEANSKMFRNVLDAVIPNCP 110

Query: 124 TVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
            +K +   +         +        +  +++       D     Y       E   LE
Sbjct: 111 NLKHISLQTGRKHYMGPFESYGKIESHDPPYTE-------DLPRLKYMNFYYDLEDIMLE 163

Query: 182 -FAEEHGLDLVTLIPSMVVGP 201
              ++ GL      P  + G 
Sbjct: 164 EVEKKEGLTWSVHRPGNIFGF 184

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 56.6 bits (136), Expect = 7e-10
 Identities = 32/196 (16%), Positives = 58/196 (29%), Gaps = 43/196 (21%)

Query: 7   RVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
            + + G  G IA  L   LL +    +T   R     + R   ++          ER+ +
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGR---QLKTRIPPEII-------DHERVTV 56

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
                 +P   + A+     V   A                   +    I+K+  +   +
Sbjct: 57  IEGSFQNPGXLEQAVTNAEVVFVGAMESG---------------SDMASIVKALSRXN-I 100

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
           +RV+  S        +  V +   TF          D+   SY   +    R A     E
Sbjct: 101 RRVIGVSMAGL--SGEFPVALEKWTF----------DNLPISYVQGE----RQARNVLRE 144

Query: 186 HGLDLVTLIPSMVVGP 201
             L+   L  + +   
Sbjct: 145 SNLNYTILRLTWLYND 160

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 54.5 bits (131), Expect = 5e-09
 Identities = 32/169 (18%), Positives = 54/169 (31%), Gaps = 19/169 (11%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           + R+ + G TG+I   +    LD G+     VR      +     L       GA     
Sbjct: 4   RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA----N 59

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
           I H  +        A+     V+     +  E +              + I+K+  + GT
Sbjct: 60  IVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQ--------------VNIIKAIKEVGT 105

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKT 173
           VKR  + S       N   V+     F       R +++ G  Y    +
Sbjct: 106 VKR-FFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSS 153

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 54.6 bits (131), Expect = 5e-09
 Identities = 29/173 (16%), Positives = 61/173 (35%), Gaps = 16/173 (9%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M++ K RV + GGTG+I   ++   +  G+      R E+       + L + K L GA 
Sbjct: 1   MDK-KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-GA- 57

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
              ++  A L        A+     V+               ++ Q        ++++  
Sbjct: 58  ---KLIEASLDDHQRLVDALKQVDVVISALAG----GVLSHHILEQLK------LVEAIK 104

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKT 173
           ++G +KR + +         +  +     TF       R +++    Y    +
Sbjct: 105 EAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS 157

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 54.4 bits (131), Expect = 8e-09
 Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 26/221 (11%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT-----TTVRSELDPEHRNSKDLSFLKNLPGASE 61
           RV V GG G+      + L    Y V           +      +   ++ + +     +
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 62  -----RLRIFHADLSHPDGFDAAIAG--CTGVLHVA--TPVDFEDKEPEE-VITQRA-IN 110
                 + ++  D+   +    +        V+H        +   +    V TQ   + 
Sbjct: 73  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 132

Query: 111 GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK------DVDMMDETFWSDVDYIRKLDSW 164
           GTL +L +  + G    +V        +           + +        + Y ++  S+
Sbjct: 133 GTLNVLFAIKEFGEECHLVK-LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSF 191

Query: 165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICP 205
              Y +SK           +  G+    L   +V G     
Sbjct: 192 ---YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDE 229

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 53.0 bits (127), Expect = 2e-08
 Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD--LSFLKNLPGASER 62
           + ++ + G TG I   ++   +  G      VR  +   +  +K+  +   ++L G    
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSL-GV--- 57

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             +   D++  +    AI     V+  A  +  ED+                I+K+  ++
Sbjct: 58  -ILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVK--------------IIKAIKEA 102

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAI 170
           G VK+   +            V+ + + F       R +++ G  Y  
Sbjct: 103 GNVKKFFPSEF-GLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTY 149

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 30/200 (15%), Positives = 51/200 (25%), Gaps = 51/200 (25%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
            V + G +G     L+  +L+ G    VT   R +L  +               A + + 
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------EAYKNVN 66

Query: 65  IFHADLSHPDGFDAAIAGCTGVLH-VATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
               D    D + +A  G       + T       E    + +   +  L   +     G
Sbjct: 67  QEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDR---DYVLKSAELAKAGG 123

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAALEF 182
             K     SS  A                         D      Y   K   E    E 
Sbjct: 124 -CKHFNLLSSKGA-------------------------DKSSNFLYLQVKGEVEAKVEEL 157

Query: 183 AEEHGLDLVTLI-PSMVVGP 201
                 D  ++  P +++  
Sbjct: 158 ----KFDRYSVFRPGVLLCD 173

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 33/222 (14%), Positives = 60/222 (27%), Gaps = 46/222 (20%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           K ++ + GGTG+I + ++   L  G+      R        NS   + L      S    
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP-------NSSKTTLLDEFQ--SLGAI 61

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
           I   +L   +     +     V+                     I     IL++   +G 
Sbjct: 62  IVKGELDEHEKLVELMKKVDVVISALAF--------------PQILDQFKILEAIKVAGN 107

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           +KR + +                   F  + D I  L  +           +R      E
Sbjct: 108 IKRFLPSD------------------FGVEEDRINALPPFEALIER-----KRMIRRAIE 144

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI 226
           E  +    +  +     FI              + G  + K 
Sbjct: 145 EANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKF 186

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 24/156 (15%)

Query: 4   GKGRVCVTGGTGFIASWLIMRLLD-----HGYSVTTTVRSELDPEHRNSKDLSFLKNLPG 58
           GK RV VTG TGF   WL + L        GYS        L      S     L     
Sbjct: 9   GK-RVFVTGHTGFKGGWLSLWLQTMGATVKGYS--------LTAPTVPS-----LFETAR 54

Query: 59  ASERLRIFHADLSHPDGFDAAIAGC--TGVLHVA--TPVDFEDKEPEEVITQRAINGTLG 114
            ++ ++    D+   +    +I       V H+A    V     EP E  +   + GT+ 
Sbjct: 55  VADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYS-TNVMGTVY 113

Query: 115 ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET 150
           +L++    G VK VV  +S+      +      +  
Sbjct: 114 LLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENE 149

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 48.5 bits (115), Expect = 6e-07
 Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 19/173 (10%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           +   KGRV + G TGFI  ++    LD         R    P  R+       K L    
Sbjct: 6   VPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILAR----PGPRSPSKAKIFKAL--ED 59

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           +   I +  ++  +  +  +      + V+T            +   +I   + ++K+  
Sbjct: 60  KGAIIVYGLINEQEAMEKILKEHEIDIVVST------------VGGESILDQIALVKAMK 107

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKT 173
             GT+KR + +     V      V+     +       + ++  G  +     
Sbjct: 108 AVGTIKRFLPSEFGHDV-NRADPVEPGLNMYREKRRVRQLVEESGIPFTYICC 159

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 47.7 bits (114), Expect = 6e-07
 Identities = 39/206 (18%), Positives = 55/206 (26%), Gaps = 56/206 (27%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPG 58
           M     RV + G TG     L+ R+L       V    R  L    R    +  L  L  
Sbjct: 1   MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAEL-- 58

Query: 59  ASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAI--NGTLGIL 116
                             D A   C G            +E       RA+  +  L + 
Sbjct: 59  ----------LPQLDGSIDTAFC-CLGTTIKEAG----SEE-----AFRAVDFDLPLAVG 98

Query: 117 KSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLT 175
           K  L+ G  +  +  S+  A                         D+     Y   K   
Sbjct: 99  KRALEMG-ARHYLVVSALGA-------------------------DAKSSIFYNRVKGEL 132

Query: 176 ERAALEFAEEHGLDLVTLIPSMVVGP 201
           E+A  E        L    PS++ GP
Sbjct: 133 EQALQEQGWPQ---LTIARPSLLFGP 155

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 48.0 bits (115), Expect = 8e-07
 Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 27/129 (20%)

Query: 10  VTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           +TG TG +  ++I  L+       +   VR   +P           K    A++ + +  
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVR---NPA----------KAQALAAQGITVRQ 50

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           AD        +A+ G   +L +++       E  +   Q        ++ +   +G VK 
Sbjct: 51  ADYGDEAALTSALQGVEKLLLISSS------EVGQRAPQ-----HRNVINAAKAAG-VKF 98

Query: 128 VVYTSSNAA 136
           + YTS   A
Sbjct: 99  IAYTSLLHA 107

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 17/128 (13%), Positives = 42/128 (32%), Gaps = 24/128 (18%)

Query: 10  VTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA 68
           +TG TG + + +  + + +        VR   + E          K       ++ +   
Sbjct: 5   LTGATGHLGTHITNQAIANHIDHFHIGVR---NVE----------KVPDDWRGKVSVRQL 51

Query: 69  DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRV 128
           D  + +    A  G   V+ + +          + I +        ++ +  +SG V  +
Sbjct: 52  DYFNQESMVEAFKGMDTVVFIPSI----IHPSFKRIPE-----VENLVYAAKQSG-VAHI 101

Query: 129 VYTSSNAA 136
           ++    A 
Sbjct: 102 IFIGYYAD 109

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 46.4 bits (110), Expect = 3e-06
 Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 32/147 (21%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
            G +   G  G+ A  L   L   G+ +  T R+                  P   E +R
Sbjct: 5   TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRN------------------PDQMEAIR 45

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
              A+     G + ++ G T +L    P    D     +  Q A            ++  
Sbjct: 46  ASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVLAALGDQIA-----------ARAAQ 94

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETF 151
            + V Y S+  AV Y D D   +DET 
Sbjct: 95  FRWVGYLST-TAV-YGDHDGAWVDETT 119

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 46.5 bits (110), Expect = 3e-06
 Identities = 17/128 (13%), Positives = 41/128 (32%), Gaps = 18/128 (14%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
             ++ + GGTG+I  +++   L   +      R    P   +S   S        S  + 
Sbjct: 4   MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYAR----PLTPDSTPSSVQLREEFRSMGVT 59

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
           I   ++   +   + +     V+          +              + I+ +   +G 
Sbjct: 60  IIEGEMEEHEKMVSVLKQVDIVISALPFPMISSQ--------------IHIINAIKAAGN 105

Query: 125 VKRVVYTS 132
           +KR + + 
Sbjct: 106 IKRFLPSD 113

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 25/129 (19%)

Query: 10  VTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VTG TG +   +I  LL       +   VR   + E            L      +R  H
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVR---NVEK--------ASTLADQGVEVR--H 51

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            D + P+    A AG + +L ++ P          ++          ++K+   +G VK 
Sbjct: 52  GDYNQPESLQKAFAGVSKLLFISGP---HYDNTLLIVQHAN------VVKAARDAG-VKH 101

Query: 128 VVYTSSNAA 136
           + YT    A
Sbjct: 102 IAYTGYAFA 110

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 2e-05
 Identities = 35/259 (13%), Positives = 66/259 (25%), Gaps = 88/259 (33%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTT---------TVRSELDPE----------HRNSK 48
           V + G  G   +W+ + +    Y V            +++   PE          ++   
Sbjct: 153 VLIDGVLGSGKTWVALDVCLS-YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211

Query: 49  DL----SFLKNLP----GASERLRIFHADLSHP---------------DGFDAAIAGC-- 83
           +         N+          LR       +                + F+     C  
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL---SCKI 268

Query: 84  ---------TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL--KSGTVKRVVYTS 132
                    T  L  AT            +T         +L   L  +   + R V T+
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE---VKSLLLKYLDCRPQDLPREVLTT 325

Query: 133 SN------AAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           +       A    +           W   D  + ++    +  I  +L     LE AE  
Sbjct: 326 NPRRLSIIAESIRDGLAT-------W---DNWKHVNCDKLTTIIESSL---NVLEPAEYR 372

Query: 187 GL--DLV-----TLIPSMV 198
            +   L        IP+++
Sbjct: 373 KMFDRLSVFPPSAHIPTIL 391

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 18/78 (23%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            V +TG  G +   L  +L   G+ V   VR E  P  R    L+   +L          
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDL---------- 198

Query: 67  HADLSHPDGFDAAI--AG 82
                  DG D  +  AG
Sbjct: 199 ------LDGADVLVHLAG 210

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 34/148 (22%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTT---VRSELDPEHRNSKDLSFLKNLP 57
            E     V VTGG G+I S  ++ L+++GY          S  D   R       L+ L 
Sbjct: 7   SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR-------LEVLT 59

Query: 58  GASERLRIFHADLSHPDGFDAAIA--GCTGVLH----------VATPVDFEDKEPEEVIT 105
                +  +  DL    G +          V+H             P+ +          
Sbjct: 60  K--HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNN------ 111

Query: 106 QRAINGTLGILKSCLKSGTVKRVVYTSS 133
              I GT+ +L+   +   V + V++SS
Sbjct: 112 ---ILGTVVLLELMQQYN-VSKFVFSSS 135

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 39.7 bits (94), Expect = 5e-04
 Identities = 42/163 (25%), Positives = 65/163 (39%), Gaps = 34/163 (20%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF--LKNLPGAS 60
             KG + VTGG G+I S   + LL HGY V        D    NSK  +   ++ + G  
Sbjct: 3   STKGTILVTGGAGYIGSHTAVELLAHGYDVVI-----AD-NLVNSKREAIARIEKITG-- 54

Query: 61  ERLRIFHADLSHPDGFDAAIA--GCTGVLH----------VATPVDFEDKEPEEVITQRA 108
           +       D+S              T  +H          VA P+++             
Sbjct: 55  KTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNN--------- 105

Query: 109 INGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF 151
           ++  L +L+   +   VKR+V++SS A V Y   +   +DETF
Sbjct: 106 LDSLLSLLRVMRERA-VKRIVFSSS-ATV-YGVPERSPIDETF 145

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 22/137 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF---LKNLPG--ASE 61
           ++ +TGG GF+ S L    L  G  +        D       +LS      NL    +  
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIV-----FD-------NLSRKGATDNLHWLSSLG 50

Query: 62  RLRIFHADLSHPDGFDAAIAGC--TGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILK 117
                H D+ + +     I         H+A    +      P     +  + GTL +L+
Sbjct: 51  NFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDF-EINVGGTLNLLE 109

Query: 118 SCLKSGTVKRVVYTSSN 134
           +  +  +   ++Y+S+N
Sbjct: 110 AVRQYNSNCNIIYSSTN 126

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	249
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.98
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.98
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.98
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.98
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.98
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.98
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.97
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.97
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.97
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.97
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.97
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.97
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.97
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.96
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.96
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.96
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.96
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.95
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.95
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.95
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.95
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.95
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.95
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.95
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.95
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.95
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.95
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.95
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.95
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.95
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.95
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.95
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.94
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.94
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.94
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.94
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.94
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.94
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.94
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.94
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.94
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.94
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.94
1spx_A	278	Short-chain reductase family member (5L265); paral	99.94
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.94
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.94
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.94
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.94
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.94
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.94
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.94
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.94
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.94
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.94
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.94
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.94
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.94
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.94
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.94
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.94
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.94
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.94
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.94
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.94
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.94
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.94
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.94
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.94
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.94
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.94
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.94
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.94
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.94
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.94
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.94
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.94
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.94
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.94
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.94
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.94
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.94
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.94
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.94
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.94
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.94
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.94
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.94
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.94
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.94
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.94
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.94
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.94
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.94
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.94
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.94
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.94
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.93
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.93
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.93
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.93
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.93
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.93
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.93
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.93
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.93
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.93
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.93
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.93
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.93
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.93
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.93
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.93
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.93
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.93
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.93
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.93
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.93
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.93
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.93
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.93
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.93
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.93
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.93
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.93
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.93
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.93
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.93
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.93
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.93
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.93
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.93
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.93
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.93
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.93
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.93
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.93
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.93
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.93
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.93
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.93
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.93
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.93
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.93
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.93
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.93
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.93
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.93
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.92
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.92
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.92
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.92
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.92
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.92
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.92
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.92
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.92
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.92
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.92
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.92
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.92
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.92
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.92
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.92
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.92
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.92
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.92
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.92
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.92
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.92
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.92
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.92
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.91
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.91
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.91
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.91
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.91
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.91
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.91
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.91
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.91
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.91
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.91
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.91
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.91
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.91
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.9
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.9
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.9
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.9
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.9
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.9
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.9
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.9
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.9
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.9
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.89
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.89
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.88
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.87
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.87
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.87
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.86
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.86
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.85
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.84
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.81
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.8
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.8
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.79
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.79
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.77
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.75
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.75
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.74
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.72
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.72
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.71
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.71
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.71
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.56
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.45
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.41
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.37
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.25
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.09
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.07
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.05
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.99
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.98
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.96
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.86
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.83
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.78
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.75
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.73
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.72
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.63
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.63
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.62
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.59
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.59
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.54
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.51
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.5
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.46
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.36
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.33
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.24
3tl2_A	315	Malate dehydrogenase; center for structural genomi	98.17
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.16
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.15
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.13
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.11
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.08
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.08
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.07
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.06
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.04
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.04
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.0
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.98
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.97
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.96
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.95
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.95
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.94
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.91
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.89
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.88
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.88
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.88
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.87
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.85
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.84
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.8
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.78
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.78
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.74
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.73
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.72
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.7
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.68
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.68
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.67
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.67
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.66
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.66
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.64
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.63
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.63
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.63
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.63
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.62
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.62
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.62
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.61
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.61
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.6
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.59
1lnq_A	336	MTHK channels, potassium channel related protein;	97.59
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.57
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.57
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.56
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.55
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.53
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.53
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.5
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.5
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.5
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.48
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.48
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.47
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.47
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.46
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.45
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.43
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.43
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.41
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.4
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.38
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.37
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.36
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.34
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.34
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.32
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.31
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.31
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.31
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.31
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.3
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.3
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.29
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.27
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.26
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.25
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.24
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.24
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.23
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.2
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.18
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.17
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.17
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.16
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.15
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.14
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.14
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.13
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.12
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.12
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.11
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.1
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.1
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.09
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.08
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.07
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.07
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.06
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.06
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.05
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.05
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.04
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.03
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.03
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.03
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.03
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	97.01
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	97.01
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.0
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.98
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.98
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.98
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.98
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.97
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.95
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.95
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.95
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.95
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.93
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.93
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.93
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.92
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.89
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.88
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.88
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.87
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.85
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.84
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.83
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.83
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.83
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.82
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.81
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.81
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.81
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.8
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.79
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.77
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.76
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.75
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.74
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	96.74
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	96.72
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.71
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.7
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.69

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=1.3e-37  Score=264.32  Aligned_cols=240  Identities=42%  Similarity=0.742  Sum_probs=174.3

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++++||||||+||||++|+++|+++|++|++++|+..     ...+...+.++.....+++++.+|++|++++.+++
T Consensus         1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   75 (337)
T 2c29_D            1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPT-----NVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI   75 (337)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTT-----CHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcc-----hhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH
Confidence            6667789999999999999999999999999999999861     11122222222211125788999999999999999


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +++|+|||+|+.......++.+.++++|+.++.++++++.+.+.+++||++||..++++......+++|+.+...++..+
T Consensus        76 ~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~  155 (337)
T 2c29_D           76 KGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRA  155 (337)
T ss_dssp             TTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHH
T ss_pred             cCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcc
Confidence            99999999999764433445446899999999999999998754689999999986655444445678887765555444


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhH
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                      ...|.+.|+.||.++|.++..+...++++++++||++||||+.....+...........+... .+... ....|+|++|
T Consensus       156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~D  233 (337)
T 2c29_D          156 KKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSII-RQGQFVHLDD  233 (337)
T ss_dssp             HCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHH
T ss_pred             cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHH
Confidence            444567899999999999998887679999999999999998654333222222222334332 22222 2345999999


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      +|.++.+
T Consensus       234 va~a~~~  240 (337)
T 2c29_D          234 LCNAHIY  240 (337)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999865

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1e-36  Score=259.53  Aligned_cols=225  Identities=17%  Similarity=0.160  Sum_probs=174.2

Q ss_pred             CCCCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            2 EEGKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      +.++|+|||||||||||++|+++|+++|  ++|++++|...      ......+.... ...+++++.+|++|++++.++
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~------~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~   93 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTY------SGNLNNVKSIQ-DHPNYYFVKGEIQNGELLEHV   93 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCT------TCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHH
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccc------ccchhhhhhhc-cCCCeEEEEcCCCCHHHHHHH
Confidence            3456899999999999999999999999  67777777641      11222232221 124789999999999999999


Q ss_pred             HcC--CCEEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCch
Q 025660           80 IAG--CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (249)
Q Consensus        80 ~~~--~d~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (249)
                      +++  +|+|||+|+.....  ..++. .++++|+.++.+|++++++.+ +++|||+||..+|+.. ....+++|+++.  
T Consensus        94 ~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~-~~~~~~~E~~~~--  168 (346)
T 4egb_A           94 IKERDVQVIVNFAAESHVDRSIENPI-PFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSL-GKTGRFTEETPL--  168 (346)
T ss_dssp             HHHHTCCEEEECCCCC---------C-HHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCC-CSSCCBCTTSCC--
T ss_pred             HhhcCCCEEEECCcccchhhhhhCHH-HHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCC-CcCCCcCCCCCC--
Confidence            987  99999999986542  23343 789999999999999999998 8999999999876543 245578888864  


Q ss_pred             hHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-cccccccccccc
Q 025660          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KLKICCVMNRSH  234 (249)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  234 (249)
                             .|.+.|+.+|..+|.+++.++.+++++++++||++||||+....  .++..+......+. ...++++.+.++
T Consensus       169 -------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
T 4egb_A          169 -------APNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGDGLNVRD  239 (346)
T ss_dssp             -------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCCEEETTSCCEEC
T ss_pred             -------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc--chHHHHHHHHHcCCCceeeCCCCeEEe
Confidence                   36789999999999999999888899999999999999987542  44445555444444 444578889999


Q ss_pred             cchhhHHHhhhhc
Q 025660          235 TLFVYAIAFAFAF  247 (249)
Q Consensus       235 ~i~v~d~a~a~~~  247 (249)
                      |+|++|+|+++.+
T Consensus       240 ~i~v~Dva~a~~~  252 (346)
T 4egb_A          240 WLHVTDHCSAIDV  252 (346)
T ss_dssp             EEEHHHHHHHHHH
T ss_pred             eEEHHHHHHHHHH
Confidence            9999999999864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.1e-37  Score=264.27  Aligned_cols=228  Identities=19%  Similarity=0.159  Sum_probs=179.4

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .++|+|||||||||||++|+++|+++|++|++++|+..    ........+......  ..+++++.+|++|++++.+++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   98 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST----GHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM   98 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC----CchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            35689999999999999999999999999999999762    111222222221110  036899999999999999999


Q ss_pred             cCCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           81 AGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        81 ~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                      +++|+|||+|+....  ...++. ..+++|+.++.+|+++|++.+ +++|||+||..+|+..  ...+++|+++.     
T Consensus        99 ~~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~-----  169 (351)
T 3ruf_A           99 KGVDHVLHQAALGSVPRSIVDPI-TTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDH--PALPKVEENIG-----  169 (351)
T ss_dssp             TTCSEEEECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTC--CCSSBCTTCCC-----
T ss_pred             cCCCEEEECCccCCcchhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCC--CCCCCccCCCC-----
Confidence            999999999997543  223444 788999999999999999998 8999999999876543  34578888763     


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHH-HHHcCCCccccccccccccc
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSL-ALILGNVKLKICCVMNRSHT  235 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  235 (249)
                          .|.+.|+.+|..+|.+++.+..+++++++++||++||||+....  ...++..+. ....+.....++++++.++|
T Consensus       170 ----~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  245 (351)
T 3ruf_A          170 ----NPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDF  245 (351)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECC
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEee
Confidence                36789999999999999999888899999999999999987543  223444444 44445544555888999999


Q ss_pred             chhhHHHhhhhc
Q 025660          236 LFVYAIAFAFAF  247 (249)
Q Consensus       236 i~v~d~a~a~~~  247 (249)
                      +|++|+|+++++
T Consensus       246 i~v~Dva~a~~~  257 (351)
T 3ruf_A          246 CYIDNVIQMNIL  257 (351)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             EEHHHHHHHHHH
Confidence            999999999764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=3.7e-36  Score=252.72  Aligned_cols=209  Identities=15%  Similarity=0.167  Sum_probs=172.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +|+|||||||||||++|+++|+++|++|++++|++        .... +.       +++++.+|++ ++++.++++++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~-~~-------~~~~~~~Dl~-~~~~~~~~~~~d   64 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSI--------GNKA-IN-------DYEYRVSDYT-LEDLINQLNDVD   64 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC--------C-------------CCEEEECCCC-HHHHHHHTTTCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCC--------Cccc-CC-------ceEEEEcccc-HHHHHHhhcCCC
Confidence            46899999999999999999999999999999985        2222 21       5789999999 999999999999


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCC
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (249)
                      +|||+|+.....  ++. ..+++|+.++.++++++++.+ +++|||+||..+|+..  ...+++|+++.         .|
T Consensus        65 ~Vih~a~~~~~~--~~~-~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~--~~~~~~E~~~~---------~p  129 (311)
T 3m2p_A           65 AVVHLAATRGSQ--GKI-SEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDE--TSLPWNEKELP---------LP  129 (311)
T ss_dssp             EEEECCCCCCSS--SCG-GGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCG--GGCSBCTTSCC---------CC
T ss_pred             EEEEccccCCCC--ChH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCC--CCCCCCCCCCC---------CC
Confidence            999999987653  444 788999999999999999998 8899999998876533  34577888763         36


Q ss_pred             CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc-cccccccccccchhhHHHh
Q 025660          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL-KICCVMNRSHTLFVYAIAF  243 (249)
Q Consensus       165 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~d~a~  243 (249)
                      .+.|+.+|..+|.+++.+..+++++++++||+.+|||...+.  .++..+.+....+..+ .++++++.++|+|++|+|+
T Consensus       130 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~  207 (311)
T 3m2p_A          130 DLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAK  207 (311)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHH
Confidence            789999999999999999988899999999999999987543  4455555555544444 4478899999999999999


Q ss_pred             hhhc
Q 025660          244 AFAF  247 (249)
Q Consensus       244 a~~~  247 (249)
                      ++.+
T Consensus       208 a~~~  211 (311)
T 3m2p_A          208 SVIY  211 (311)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9865

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=1.4e-36  Score=255.99  Aligned_cols=234  Identities=54%  Similarity=0.971  Sum_probs=166.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEc-CCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR-SELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +|+||||||+||||++++++|+++|++|++++| +..     ...+...+.++.....+++++.+|++|++++.++++++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   75 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPE-----RKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGC   75 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC---------CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCcc-----chhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCC
Confidence            368999999999999999999999999999998 541     00111122222211125788999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      |+|||+|+.......++.+.++++|+.++.++++++.+. + +++||++||..++++......+++|+.+.+.++..+..
T Consensus        76 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  154 (322)
T 2p4h_X           76 VGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVK  154 (322)
T ss_dssp             SEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHC
T ss_pred             CEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccC
Confidence            999999986533333333358999999999999999987 5 78999999988665543334567888766554433332


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                      ++.+.|+.||.++|.++.++.+.++++++++||++||||+.....+.....+.+...+... .+..  ...+|+|++|+|
T Consensus       155 p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~-~~~~--~~~~~i~v~Dva  231 (322)
T 2p4h_X          155 PFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKE-QIGV--TRFHMVHVDDVA  231 (322)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGG-GCCE--EEEEEEEHHHHH
T ss_pred             cccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCc-cCcC--CCcCEEEHHHHH
Confidence            2233799999999999999887789999999999999998654333323233333444332 2332  334899999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      .++.+
T Consensus       232 ~a~~~  236 (322)
T 2p4h_X          232 RAHIY  236 (322)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99865

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=3.2e-37  Score=261.91  Aligned_cols=237  Identities=41%  Similarity=0.635  Sum_probs=164.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|+|||||||||||++|+++|+++|++|++++|+..     ...+...+..+. ...+++++.+|++|++++.++++++
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~-----~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~   81 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPD-----NQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGC   81 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTT-----CTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcc-----hhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCC
Confidence            3578999999999999999999999999999999761     101111111111 1236889999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCC--ccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD--VDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+.......++.+.++++|+.|+.++++++.+.+.+++|||+||..++++....  ..+++|+.+.+.++..+.
T Consensus        82 D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  161 (338)
T 2rh8_A           82 DFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSA  161 (338)
T ss_dssp             SEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC------
T ss_pred             CEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhcccc
Confidence            999999997644333443358999999999999999987437899999998755433221  136788876554433222


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccc------ccccccc
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICC------VMNRSHT  235 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  235 (249)
                      ..+.+.|+.||.++|.++..+...++++++++||++||||+.....+.....+.....+... .+..      ....++|
T Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~  240 (338)
T 2rh8_A          162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSI  240 (338)
T ss_dssp             -CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEE
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-ccccccccccccCcccE
Confidence            22344799999999999999887679999999999999998755444333333333444332 2221      1233489


Q ss_pred             chhhHHHhhhhc
Q 025660          236 LFVYAIAFAFAF  247 (249)
Q Consensus       236 i~v~d~a~a~~~  247 (249)
                      +|++|+|.++.+
T Consensus       241 i~v~Dva~a~~~  252 (338)
T 2rh8_A          241 AHVEDVCRAHIF  252 (338)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             EEHHHHHHHHHH
Confidence            999999999865

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=4.2e-36  Score=255.85  Aligned_cols=214  Identities=17%  Similarity=0.147  Sum_probs=175.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|+|||||||||||++|+++|+++|++|++++|+..        .           .+++++.+|++|++++.++++++
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~--------~-----------~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS--------G-----------TGGEEVVGSLEDGQALSDAIMGV   78 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC--------S-----------SCCSEEESCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC--------C-----------CCccEEecCcCCHHHHHHHHhCC
Confidence            4578999999999999999999999999999999871        1           35778999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+|||+|+.......+. +.++++|+.++.++++++++.+ +++|||+||..+|+.......+++|+++.         .
T Consensus        79 d~vih~A~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~---------~  147 (347)
T 4id9_A           79 SAVLHLGAFMSWAPADR-DRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHPL---------C  147 (347)
T ss_dssp             SEEEECCCCCCSSGGGH-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCC---------C
T ss_pred             CEEEECCcccCcchhhH-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCCC---------C
Confidence            99999999876644444 4899999999999999999988 89999999999876543455678888763         3


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEe-------------CCCCCCC---------CCccHHHHHHHHcCC
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVV-------------GPFICPK---------FAGSVRSSLALILGN  221 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~-------------g~~~~~~---------~~~~~~~~~~~~~~~  221 (249)
                      |.+.|+.+|.++|.+++.+..+++++++++||+++|             ||+....         ...++..+......+
T Consensus       148 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (347)
T 4id9_A          148 PNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIG  227 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCS
T ss_pred             CCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcC
Confidence            678999999999999999988889999999999999             7654321         123444555555555


Q ss_pred             Cc-cccccccccccc----chhhHHHhhhhc
Q 025660          222 VK-LKICCVMNRSHT----LFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~-~~~~~~~~~~~~----i~v~d~a~a~~~  247 (249)
                      .. ..++++.+.++|    +|++|+|+++++
T Consensus       228 ~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~  258 (347)
T 4id9_A          228 EPSHILARNENGRPFRMHITDTRDMVAGILL  258 (347)
T ss_dssp             SCCEEEEECTTCCBCEECEEEHHHHHHHHHH
T ss_pred             CCeEEeCCCCcccCCccCcEeHHHHHHHHHH
Confidence            44 456788899999    999999999864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=9.5e-36  Score=255.30  Aligned_cols=227  Identities=18%  Similarity=0.097  Sum_probs=173.6

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHH--CCCeEEEEEcCCCCcccC--CchhhhhhccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLD--HGYSVTTTVRSELDPEHR--NSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      .++|+||||||+||||++|+++|++  +|++|++++|+.......  ..+........  ...++.++.+|++|++++.+
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--IGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG--TTCCSEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc--cccCceEEECCCCCHHHHHH
Confidence            3468999999999999999999999  999999999976200000  00000111111  12357899999999999999


Q ss_pred             H-HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           79 A-IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        79 ~-~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                      + ..++|+||||||.......++. ..+++|+.++.++++++++.+ .+ ||++||..+|+....   +++|+++.    
T Consensus        86 ~~~~~~D~vih~A~~~~~~~~~~~-~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~---~~~E~~~~----  155 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTMLNQE-LVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKA---PNVVGKNE----  155 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGCCCHH-HHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCS---SBCTTSCC----
T ss_pred             hhccCCCEEEECCccCCccccCHH-HHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCC---CCCCCCCC----
Confidence            9 7789999999997665445555 899999999999999999888 55 999999887654322   78888763    


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC--CccHHHHHHHHcCCC-cccccccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVRSSLALILGNV-KLKICCVMNRSH  234 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~  234 (249)
                           .|.+.|+.||.++|.+++.+..+  ++++++||+++|||+.....  ..++..+......+. ...++.+.+.++
T Consensus       156 -----~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (362)
T 3sxp_A          156 -----SPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRD  228 (362)
T ss_dssp             -----CCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEE
T ss_pred             -----CCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEc
Confidence                 46789999999999999998763  89999999999999875431  244444444444444 444588889999


Q ss_pred             cchhhHHHhhhhcc
Q 025660          235 TLFVYAIAFAFAFN  248 (249)
Q Consensus       235 ~i~v~d~a~a~~~~  248 (249)
                      |+|++|+|+++++.
T Consensus       229 ~i~v~Dva~ai~~~  242 (362)
T 3sxp_A          229 FVYIEDVIQANVKA  242 (362)
T ss_dssp             CEEHHHHHHHHHHH
T ss_pred             cEEHHHHHHHHHHH
Confidence            99999999998753

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-35  Score=251.80  Aligned_cols=228  Identities=20%  Similarity=0.236  Sum_probs=175.5

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ||+++|+||||||+||||++++++|+++|++|++++|+..    ...+..+.+...  .+.+++++.+|++|++++.+++
T Consensus         1 ~M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~----~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~   74 (341)
T 3enk_A            1 SMSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN----SKREAIARIEKI--TGKTPAFHETDVSDERALARIF   74 (341)
T ss_dssp             -CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS----SCTHHHHHHHHH--HSCCCEEECCCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc----chHHHHHHHHhh--cCCCceEEEeecCCHHHHHHHH
Confidence            3446779999999999999999999999999999999762    111111222111  1236789999999999999999


Q ss_pred             c--CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchh
Q 025660           81 A--GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (249)
Q Consensus        81 ~--~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (249)
                      +  ++|+|||+||....  ...++. ..+++|+.++.++++++++.+ .++||++||..+|+..  ...+++|+.+..  
T Consensus        75 ~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~--~~~~~~e~~~~~--  148 (341)
T 3enk_A           75 DAHPITAAIHFAALKAVGESVAKPI-EYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVP--ERSPIDETFPLS--  148 (341)
T ss_dssp             HHSCCCEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSC--SSSSBCTTSCCB--
T ss_pred             hccCCcEEEECccccccCccccChH-HHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCC--CCCCCCCCCCCC--
Confidence            8  89999999998643  122333 788999999999999999988 8899999999876432  345688887643  


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcC-CcEEEeecCeEeCCCCCCC--------CCccHHHHHHHHcCCC-ccc-
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHG-LDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNV-KLK-  225 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~-~~~-  225 (249)
                             |.+.|+.||.++|.+++.++.+++ ++++++||+++|||.....        ...++..+.+...+.. .+. 
T Consensus       149 -------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (341)
T 3enk_A          149 -------ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRV  221 (341)
T ss_dssp             -------CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEE
T ss_pred             -------CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEE
Confidence                   578899999999999999988775 9999999999999965321        1334556666555543 332 


Q ss_pred             cc------ccccccccchhhHHHhhhhc
Q 025660          226 IC------CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~------~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ++      ++++.++|+|++|+|+++.+
T Consensus       222 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~  249 (341)
T 3enk_A          222 FGSDYPTPDGTGVRDYIHVVDLARGHIA  249 (341)
T ss_dssp             ECSCSSSTTSSCEECEEEHHHHHHHHHH
T ss_pred             eCCccCCCCCCeeEeeEEHHHHHHHHHH
Confidence            34      78889999999999998754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.8e-35  Score=246.73  Aligned_cols=215  Identities=20%  Similarity=0.212  Sum_probs=161.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +|+||||||+||||++++++|+++|++|++++|+.        ...+.+..     .+++++.+|++|++++.++++++|
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~d   79 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS--------SQIQRLAY-----LEPECRVAEMLDHAGLERALRGLD   79 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTT--------SCGGGGGG-----GCCEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCh--------Hhhhhhcc-----CCeEEEEecCCCHHHHHHHHcCCC
Confidence            35899999999999999999999999999999987        33222321     257899999999999999999999


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCC
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (249)
                      +|||+|+.......++. .++++|+.++.++++++.+.+ +++||++||..+|+.......+ +|+++..+..     ..
T Consensus        80 ~vih~a~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~-----~~  151 (342)
T 2x4g_A           80 GVIFSAGYYPSRPRRWQ-EEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLP-----SG  151 (342)
T ss_dssp             EEEEC-------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCC-----TT
T ss_pred             EEEECCccCcCCCCCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCC-CCCCCCCccc-----cc
Confidence            99999997654333443 789999999999999999988 8999999999987554332234 7777643100     00


Q ss_pred             CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCC-CCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHh
Q 025660          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI-CPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAF  243 (249)
Q Consensus       165 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~  243 (249)
                      .+.|+.+|..+|.+++.++.. +++++++||+.+|||+. .+.   +...+..... +....+  +++.++|+|++|+|+
T Consensus       152 ~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~-~~~~~~--~~~~~~~i~v~Dva~  224 (342)
T 2x4g_A          152 KSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPT---TGRVITAIGN-GEMTHY--VAGQRNVIDAAEAGR  224 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCS---TTHHHHHHHT-TCCCEE--ECCEEEEEEHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcccc---HHHHHHHHHc-CCCccc--cCCCcceeeHHHHHH
Confidence            678999999999999998876 99999999999999986 321   2223333333 333333  678889999999999


Q ss_pred             hhhc
Q 025660          244 AFAF  247 (249)
Q Consensus       244 a~~~  247 (249)
                      ++++
T Consensus       225 ~~~~  228 (342)
T 2x4g_A          225 GLLM  228 (342)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.2e-34  Score=250.10  Aligned_cols=223  Identities=15%  Similarity=0.089  Sum_probs=173.2

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+||+||||||+||||++++++|+++|++|++++|+..        ....+.     ..+++++.+|++|++++.+++++
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~~   93 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN--------EHMTED-----MFCDEFHLVDLRVMENCLKVTEG   93 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--------SSSCGG-----GTCSEEEECCTTSHHHHHHHHTT
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCc--------cchhhc-----cCCceEEECCCCCHHHHHHHhCC
Confidence            35679999999999999999999999999999999862        111111     12578999999999999999999


Q ss_pred             CCEEEEccccCCCC---CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC---CccccCCCCCCchh
Q 025660           83 CTGVLHVATPVDFE---DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK---DVDMMDETFWSDVD  156 (249)
Q Consensus        83 ~d~vih~a~~~~~~---~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~~~e~~~~~~~  156 (249)
                      +|+|||+|+.....   ..++. ..+++|+.++.++++++++.+ +++||++||..+|+....   ...+++|+++..  
T Consensus        94 ~d~Vih~A~~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~--  169 (379)
T 2c5a_A           94 VDHVFNLAADMGGMGFIQSNHS-VIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWP--  169 (379)
T ss_dssp             CSEEEECCCCCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSS--
T ss_pred             CCEEEECceecCcccccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCC--
Confidence            99999999976431   34444 889999999999999999887 889999999987654322   123466665211  


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCC--ccHH-HHHHHHcCCCcc-cccccccc
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA--GSVR-SSLALILGNVKL-KICCVMNR  232 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~--~~~~-~~~~~~~~~~~~-~~~~~~~~  232 (249)
                           ..|.+.|+.+|..+|.+++.++.+++++++++||+++|||+......  .++. ++.....+...+ .++++.+.
T Consensus       170 -----~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  244 (379)
T 2c5a_A          170 -----AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQT  244 (379)
T ss_dssp             -----BCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCE
T ss_pred             -----CCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCee
Confidence                 23568899999999999999988789999999999999998654221  2333 333444555523 45778888


Q ss_pred             cccchhhHHHhhhhc
Q 025660          233 SHTLFVYAIAFAFAF  247 (249)
Q Consensus       233 ~~~i~v~d~a~a~~~  247 (249)
                      ++|+|++|+|+++.+
T Consensus       245 ~~~i~v~Dva~ai~~  259 (379)
T 2c5a_A          245 RSFTFIDECVEGVLR  259 (379)
T ss_dssp             ECCEEHHHHHHHHHH
T ss_pred             EEEEEHHHHHHHHHH
Confidence            999999999999864

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=4.6e-35  Score=245.88  Aligned_cols=212  Identities=24%  Similarity=0.235  Sum_probs=167.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+|||||||||||++|+++|+++|++|++++|+.        .......     ..+++++.+|++|++ +.++++. |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~-----~~~~~~~~~Dl~d~~-~~~~~~~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS--------SGRREFV-----NPSAELHVRDLKDYS-WGAGIKG-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCS--------SCCGGGS-----CTTSEEECCCTTSTT-TTTTCCC-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC--------CCchhhc-----CCCceEEECccccHH-HHhhcCC-CE
Confidence            4799999999999999999999999999999986        2211111     236789999999999 8888877 99


Q ss_pred             EEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           86 VLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        86 vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |||+|+....  ...++. ..+++|+.++.++++++++.+ +++|||+||..+|+..  ...+++|+.+.         .
T Consensus        66 vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~--~~~~~~e~~~~---------~  132 (312)
T 3ko8_A           66 VFHFAANPEVRLSTTEPI-VHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDA--DVIPTPEEEPY---------K  132 (312)
T ss_dssp             EEECCSSCSSSGGGSCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC--SSSSBCTTSCC---------C
T ss_pred             EEECCCCCCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCC--CCCCCCCCCCC---------C
Confidence            9999996543  334454 889999999999999999988 8899999999876543  34567887763         3


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc-cccccccccccchhhHHH
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL-KICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~d~a  242 (249)
                      |.+.|+.||..+|.+++.++.+++++++++||+++|||+....  .+...+.....+...+ .++++.+.++|+|++|+|
T Consensus       133 p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  210 (312)
T 3ko8_A          133 PISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHG--VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAV  210 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSS--HHHHHHHHHHHCTTEEEEC----CEECEEEHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCC--hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHH
Confidence            6789999999999999999988899999999999999986532  2223445555554544 557888999999999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      +++.+
T Consensus       211 ~a~~~  215 (312)
T 3ko8_A          211 EATLA  215 (312)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=7.7e-35  Score=244.80  Aligned_cols=212  Identities=21%  Similarity=0.243  Sum_probs=168.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+|||||||||||++|+++|+++| .++++++...       .....+      ...++++.+|+++ +++.++++++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~-------~~~~~~------~~~~~~~~~Dl~~-~~~~~~~~~~d~   66 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSS-------GNEEFV------NEAARLVKADLAA-DDIKDYLKGAEE   66 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSS-------CCGGGS------CTTEEEECCCTTT-SCCHHHHTTCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCC-------CChhhc------CCCcEEEECcCCh-HHHHHHhcCCCE
Confidence            589999999999999999999999 4555554431       111111      2368899999999 999999999999


Q ss_pred             EEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           86 VLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        86 vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |||+|+....  ..+++. ..+++|+.++.++++++++.+ +++||++||..+|+..  ...+++|+.+.         .
T Consensus        67 vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~--~~~~~~E~~~~---------~  133 (313)
T 3ehe_A           67 VWHIAANPDVRIGAENPD-EIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEA--KVIPTPEDYPT---------H  133 (313)
T ss_dssp             EEECCCCCCCC-CCCCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSC--SSSSBCTTSCC---------C
T ss_pred             EEECCCCCChhhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcC--CCCCCCCCCCC---------C
Confidence            9999996543  344554 899999999999999999988 8899999999876543  34577887763         3


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc-cccccccccccchhhHHH
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL-KICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~d~a  242 (249)
                      |.+.|+.+|..+|.+++.++.+++++++++||++||||+....  .+...+.....+...+ .++++++.++|+|++|+|
T Consensus       134 ~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  211 (313)
T 3ehe_A          134 PISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHG--VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCV  211 (313)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCS--HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcC--hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHH
Confidence            6788999999999999999988899999999999999986532  2223455555564544 567888999999999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      +++.+
T Consensus       212 ~a~~~  216 (313)
T 3ehe_A          212 DAMLF  216 (313)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99865

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=6.8e-35  Score=249.39  Aligned_cols=224  Identities=19%  Similarity=0.126  Sum_probs=172.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      ++|+||||||+||||++|+++|+++|++|++++|+.        .....+........+++++.+|++|++++.+++++ 
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   79 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA--------PTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF   79 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------SSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCC--------cccchhhHhhccCCceEEEEccccCHHHHHHHHHhc
Confidence            357899999999999999999999999999999986        22111111001134688999999999999999986 


Q ss_pred             -CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                       +|+|||+||....  ...++. ..+++|+.++.++++++.+.+.+++||++||..+|+.. ....+++|+++.      
T Consensus        80 ~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~-~~~~~~~E~~~~------  151 (357)
T 1rkx_A           80 QPEIVFHMAAQPLVRLSYSEPV-ETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNK-EWIWGYRENEAM------  151 (357)
T ss_dssp             CCSEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCC-CSSSCBCTTSCB------
T ss_pred             CCCEEEECCCCcccccchhCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCC-CcCCCCCCCCCC------
Confidence             8999999996322  123343 78999999999999999987547899999999876543 222456776653      


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHc---------CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEH---------GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVM  230 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---------~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (249)
                         .|.+.|+.||..+|.+++.++.++         +++++++||+.||||+.... ..++..+.+....+..+.+..++
T Consensus       152 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~  227 (357)
T 1rkx_A          152 ---GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPH  227 (357)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTT
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-ccHHHHHHHHHhcCCCEEECCCC
Confidence               256789999999999999987654         89999999999999986432 34555555555555555566677


Q ss_pred             cccccchhhHHHhhhhc
Q 025660          231 NRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~~  247 (249)
                      +.++|+|++|+|+++..
T Consensus       228 ~~~~~v~v~Dva~a~~~  244 (357)
T 1rkx_A          228 AIRPWQHVLEPLSGYLL  244 (357)
T ss_dssp             CEECCEETHHHHHHHHH
T ss_pred             CeeccEeHHHHHHHHHH
Confidence            88999999999998753

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1e-34  Score=244.72  Aligned_cols=215  Identities=16%  Similarity=0.146  Sum_probs=169.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      ++++||||||+||||++++++|+++|++|++++|+.        .. ..   +     +++++.+|++|++++.+++++ 
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~--------~~-~~---l-----~~~~~~~Dl~d~~~~~~~~~~~   73 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNN--------EA-KL---P-----NVEMISLDIMDSQRVKKVISDI   73 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCT--------TC-CC---T-----TEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCC--------cc-cc---c-----eeeEEECCCCCHHHHHHHHHhc
Confidence            457999999999999999999999999999999987        21 11   1     578999999999999999985 


Q ss_pred             -CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                       +|+|||+||....  ..+++. ..+++|+.++.++++++.+.+.+++||++||..+|+.......+++|+++..     
T Consensus        74 ~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~-----  147 (321)
T 2pk3_A           74 KPDYIFHLAAKSSVKDSWLNKK-GTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLR-----  147 (321)
T ss_dssp             CCSEEEECCSCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB-----
T ss_pred             CCCEEEEcCcccchhhhhhcHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC-----
Confidence             9999999997653  223454 8999999999999999977622789999999987654311345788887633     


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHH-HHHc---C--CCccccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSL-ALIL---G--NVKLKICCVMNRS  233 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~-~~~~---~--~~~~~~~~~~~~~  233 (249)
                          |.+.|+.||.++|.+++.++.+++++++++||+++|||+....  .++..+. ....   +  .....++.+.+.+
T Consensus       148 ----~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  221 (321)
T 2pk3_A          148 ----PMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG--FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVR  221 (321)
T ss_dssp             ----CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHHTTSSCSEEEESCSSCEE
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC--chHHHHHHHHHHHhcCCCCCeEEeCCCCcEE
Confidence                5678999999999999999887899999999999999986542  2233333 2223   4  2334457778889


Q ss_pred             ccchhhHHHhhhhc
Q 025660          234 HTLFVYAIAFAFAF  247 (249)
Q Consensus       234 ~~i~v~d~a~a~~~  247 (249)
                      +|+|++|+|+++.+
T Consensus       222 ~~v~v~Dva~a~~~  235 (321)
T 2pk3_A          222 DFTDVRDIVQAYWL  235 (321)
T ss_dssp             EEEEHHHHHHHHHH
T ss_pred             eeEEHHHHHHHHHH
Confidence            99999999999864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=4.4e-35  Score=251.90  Aligned_cols=224  Identities=20%  Similarity=0.231  Sum_probs=174.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCC-ChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-HPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~   81 (249)
                      ++|+|||||||||||++|+++|+++ |++|++++|+.        .....+...    .+++++.+|++ |.+++.++++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~--------~~~~~~~~~----~~v~~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT--------DRLGDLVKH----ERMHFFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCC--------TTTGGGGGS----TTEEEEECCTTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCCh--------hhhhhhccC----CCeEEEeCccCCCHHHHHHHhc
Confidence            4579999999999999999999998 99999999987        333333221    37899999999 9999999999


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++|+|||+|+....  ...++. ..+++|+.++.+|+++|++.+  ++|||+||..+|+..  ...+++|+++...  ..
T Consensus        91 ~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~--~~~~~~e~~~~~~--~~  163 (372)
T 3slg_A           91 KCDVILPLVAIATPATYVKQPL-RVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMC--ADEQFDPDASALT--YG  163 (372)
T ss_dssp             HCSEEEECBCCCCHHHHHHCHH-HHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSC--CCSSBCTTTCCEE--EC
T ss_pred             cCCEEEEcCccccHHHHhhCHH-HHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCC--CCCCCCccccccc--cC
Confidence            99999999997654  123444 788999999999999999987  799999998876543  2345666653210  01


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC------CCccHHHHHH-HHcCCCcccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVRSSLA-LILGNVKLKICCVMNR  232 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~  232 (249)
                      +...|.+.|+.+|..+|.+++.+... +++++++||++||||+..+.      ...++..+.. ...+.....++++++.
T Consensus       164 p~~~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  242 (372)
T 3slg_A          164 PINKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQK  242 (372)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCE
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceE
Confidence            11246778999999999999999876 99999999999999986532      2234444444 4445444455788999


Q ss_pred             cccchhhHHHhhhhc
Q 025660          233 SHTLFVYAIAFAFAF  247 (249)
Q Consensus       233 ~~~i~v~d~a~a~~~  247 (249)
                      ++|+|++|+|+++++
T Consensus       243 ~~~i~v~Dva~a~~~  257 (372)
T 3slg_A          243 RAFTYVDDGISALMK  257 (372)
T ss_dssp             EECEEHHHHHHHHHH
T ss_pred             EEEEEHHHHHHHHHH
Confidence            999999999999864

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.2e-34  Score=246.77  Aligned_cols=224  Identities=15%  Similarity=0.130  Sum_probs=172.0

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |+ .||+||||||+||||++++++|+++  |++|++++|+...      .....+....  ..+++++.+|++|++++.+
T Consensus         1 Ms-~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~------~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~   71 (348)
T 1oc2_A            1 MS-QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA------GNKANLEAIL--GDRVELVVGDIADAELVDK   71 (348)
T ss_dssp             ---CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTT------CCGGGTGGGC--SSSEEEEECCTTCHHHHHH
T ss_pred             CC-cCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCC------CChhHHhhhc--cCCeEEEECCCCCHHHHHH
Confidence            54 3579999999999999999999999  8999999997510      1112222221  1468899999999999999


Q ss_pred             HHcCCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC----------Cccc
Q 025660           79 AIAGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK----------DVDM  146 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~----------~~~~  146 (249)
                      +++++|+|||+||....  ...++. ..+++|+.++.++++++.+.+ . +||++||..+|+....          ...+
T Consensus        72 ~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~  148 (348)
T 1oc2_A           72 LAAKADAIVHYAAESHNDNSLNDPS-PFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEK  148 (348)
T ss_dssp             HHTTCSEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSS
T ss_pred             HhhcCCEEEECCcccCccchhhCHH-HHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCC
Confidence            99999999999997543  112333 788999999999999999988 6 9999999987654321          0146


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHH-HHHHHHcCCCccc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR-SSLALILGNVKLK  225 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~  225 (249)
                      ++|+++.         .|.+.|+.||..+|.+++.++.+++++++++||+.+|||+...  ..++. .+.....+.....
T Consensus       149 ~~E~~~~---------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~  217 (348)
T 1oc2_A          149 FTAETNY---------NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI--EKFIPRQITNILAGIKPKL  217 (348)
T ss_dssp             BCTTSCC---------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT--TSHHHHHHHHHHHTCCCEE
T ss_pred             cCCCCCC---------CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc--cchHHHHHHHHHcCCCceE
Confidence            7777653         3568899999999999999988789999999999999998643  23333 3344444544444


Q ss_pred             ccccccccccchhhHHHhhhhc
Q 025660          226 ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ++.+.+.++|+|++|+|.++.+
T Consensus       218 ~~~~~~~~~~i~v~Dva~~~~~  239 (348)
T 1oc2_A          218 YGEGKNVRDWIHTNDHSTGVWA  239 (348)
T ss_dssp             ETTSCCEEECEEHHHHHHHHHH
T ss_pred             ecCCCceEeeEEHHHHHHHHHH
Confidence            5778888999999999999864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2e-34  Score=244.32  Aligned_cols=222  Identities=19%  Similarity=0.211  Sum_probs=169.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      +|+||||||+||||++++++|+++|  ++|++++|+...      ...+.+.++.. ..+++++.+|++|++++.+++.+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~------~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~   75 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYG------SNPANLKDLED-DPRYTFVKGDVADYELVKELVRK   75 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTT------CCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHT
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCccc------CchhHHhhhcc-CCceEEEEcCCCCHHHHHHHhhC
Confidence            3579999999999999999999997  899999987510      11222222221 34689999999999999999999


Q ss_pred             CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +|+|||+||....  ...++. .++++|+.++.++++++.+.+..++||++||..+|+...  ..+++|+++.       
T Consensus        76 ~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~--~~~~~E~~~~-------  145 (336)
T 2hun_A           76 VDGVVHLAAESHVDRSISSPE-IFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDIL--KGSFTENDRL-------  145 (336)
T ss_dssp             CSEEEECCCCCCHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCS--SSCBCTTBCC-------
T ss_pred             CCEEEECCCCcChhhhhhCHH-HHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCC--CCCcCCCCCC-------
Confidence            9999999997542  112343 789999999999999999886237999999998765432  3467787653       


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHH-HcCCCcccccccccccccchhh
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNVKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~  239 (249)
                        .|.+.|+.||..+|.+++.++.+++++++++||+.||||+...  ..++..+... ..+.....++++.+.++|+|++
T Consensus       146 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (336)
T 2hun_A          146 --MPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFP--EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVE  221 (336)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCT--TSHHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc--CchHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence              3567899999999999999988889999999999999998643  2334334433 3444333447788889999999


Q ss_pred             HHHhhhhc
Q 025660          240 AIAFAFAF  247 (249)
Q Consensus       240 d~a~a~~~  247 (249)
                      |+|+++.+
T Consensus       222 Dva~~~~~  229 (336)
T 2hun_A          222 DHVRAIEL  229 (336)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=6.4e-35  Score=249.19  Aligned_cols=227  Identities=20%  Similarity=0.159  Sum_probs=174.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC--CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+||||||+||||++++++|+++|++|++++|+..    ...+....+.+...  ...+++++.+|++|++++.++++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFAT----GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCc----cchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc
Confidence            4579999999999999999999999999999999761    01112222211100  01368899999999999999999


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++|+|||+|+....  ...++. ..+++|+.++.++++++.+.+ +++||++||..+|+..  ...+++|+++.      
T Consensus       102 ~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~--~~~~~~E~~~~------  171 (352)
T 1sb8_A          102 GVDYVLHQAALGSVPRSINDPI-TSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDH--PGLPKVEDTIG------  171 (352)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTC--CCSSBCTTCCC------
T ss_pred             CCCEEEECCcccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCC--CCCCCCCCCCC------
Confidence            99999999997542  112343 788999999999999999987 8999999999876543  23467788763      


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHH-HHHHcCCCcccccccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSS-LALILGNVKLKICCVMNRSHTL  236 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i  236 (249)
                         .|.+.|+.+|..+|.+++.++.+++++++++||+.||||+....  ...++..+ .....+.....++++++.++|+
T Consensus       172 ---~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  248 (352)
T 1sb8_A          172 ---KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  248 (352)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeE
Confidence               35788999999999999999887899999999999999986543  22334333 3444454444457788889999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|+|+++++
T Consensus       249 ~v~Dva~a~~~  259 (352)
T 1sb8_A          249 YIENTVQANLL  259 (352)
T ss_dssp             EHHHHHHHHHH
T ss_pred             EHHHHHHHHHH
Confidence            99999988754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=3.8e-35  Score=246.24  Aligned_cols=216  Identities=13%  Similarity=0.066  Sum_probs=172.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +|+||||||+||||++++++|+++  |++|++++|+..        .....       .+++++.+|++|++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~--------~~~~~-------~~~~~~~~D~~d~~~~~~~~~~   66 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKL--------NTDVV-------NSGPFEVVNALDFNQIEHLVEV   66 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCC--------SCHHH-------HSSCEEECCTTCHHHHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCc--------ccccc-------CCCceEEecCCCHHHHHHHHhh
Confidence            468999999999999999999999  899999999862        11111       135689999999999999998 


Q ss_pred             -CCCEEEEccccCCCC-CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 -GCTGVLHVATPVDFE-DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 -~~d~vih~a~~~~~~-~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                       ++|+|||+|+..... ..++. ..+++|+.++.++++++++.+ +++||++||..+|+... ...+.+|+.+.      
T Consensus        67 ~~~d~vih~a~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~-~~~~~~e~~~~------  137 (312)
T 2yy7_A           67 HKITDIYLMAALLSATAEKNPA-FAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTT-PKENTPQYTIM------  137 (312)
T ss_dssp             TTCCEEEECCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTS-CSSSBCSSCBC------
T ss_pred             cCCCEEEECCccCCCchhhChH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCC-CCCCccccCcC------
Confidence             899999999975431 12343 789999999999999999988 88999999998765432 23466777653      


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC---CccHHHHHHHHcCCCcccccccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF---AGSVRSSLALILGNVKLKICCVMNRSHTL  236 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  236 (249)
                         .|.+.|+.+|..+|.+++.++.+++++++++||+.+|||...+..   ..+...+.+.+.+++...++.+++.++|+
T Consensus       138 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  214 (312)
T 2yy7_A          138 ---EPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMM  214 (312)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEE
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeee
Confidence               357889999999999999988878999999999999998754321   22445566666666655567788899999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|+|+++..
T Consensus       215 ~v~Dva~a~~~  225 (312)
T 2yy7_A          215 YMDDAIDATIN  225 (312)
T ss_dssp             EHHHHHHHHHH
T ss_pred             eHHHHHHHHHH
Confidence            99999998753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=3.7e-34  Score=242.15  Aligned_cols=216  Identities=18%  Similarity=0.214  Sum_probs=170.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+||||||+||||++++++|+++|++|++++|+..        ...  ..+.   .+++++.+|++|++++.++++  ++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~--~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQT--------GHE--DAIT---EGAKFYNGDLRDKAFLRDVFTQENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS--------CCG--GGSC---TTSEEEECCTTCHHHHHHHHHHSCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCc--------Cch--hhcC---CCcEEEECCCCCHHHHHHHHhhcCC
Confidence            58999999999999999999999999999999761        111  1111   257899999999999999998  89


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+....  ...++. .++++|+.++.+|++++++.+ +++||++||..+|+..  ...+++|+++.        
T Consensus        69 d~vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~--~~~~~~E~~~~--------  136 (330)
T 2c20_A           69 EAVMHFAADSLVGVSMEKPL-QYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEV--DVDLITEETMT--------  136 (330)
T ss_dssp             EEEEECCCCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSC--SSSSBCTTSCC--------
T ss_pred             CEEEECCcccCccccccCHH-HHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCC--CCCCCCcCCCC--------
Confidence            999999997543  112343 788999999999999999987 8899999999876432  34578888763        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC-------CCccHHHHHHHHcCC-Ccccc-c-----
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-------FAGSVRSSLALILGN-VKLKI-C-----  227 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~-~~~~~-~-----  227 (249)
                       .|.+.|+.+|..+|.+++.++.+++++++++||+++|||+....       ...++..+.+...+. +.+.+ +     
T Consensus       137 -~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  215 (330)
T 2c20_A          137 -NPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNT  215 (330)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSS
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCcccc
Confidence             35688999999999999999887899999999999999974321       133455566655543 33332 2     


Q ss_pred             -ccccccccchhhHHHhhhhc
Q 025660          228 -CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       228 -~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ++++.++|+|++|+|+++..
T Consensus       216 ~~g~~~~~~v~v~Dva~a~~~  236 (330)
T 2c20_A          216 PDGTCIRDYIHVEDLVAAHFL  236 (330)
T ss_dssp             SSSSCEECEEEHHHHHHHHHH
T ss_pred             CCCceeEeeEeHHHHHHHHHH
Confidence             57788999999999998753

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=4.1e-34  Score=242.67  Aligned_cols=220  Identities=23%  Similarity=0.244  Sum_probs=170.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC---C---CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH---G---YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+||||||+||||++++++|+++   |   ++|++++|+...      .....+..+. ...+++++.+|++|++++.++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~   73 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYA------GNRANLAPVD-ADPRLRFVHGDIRDAGLLARE   73 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTT------CCGGGGGGGT-TCTTEEEEECCTTCHHHHHHH
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCcc------Cchhhhhhcc-cCCCeEEEEcCCCCHHHHHHH
Confidence            37999999999999999999997   8   999999997510      1112222221 124689999999999999999


Q ss_pred             HcCCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           80 IAGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                      +.++|+|||+|+....  ...++. .++++|+.++.++++++.+.+ +++||++||..+|+...  ..+++|+++.    
T Consensus        74 ~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~--~~~~~E~~~~----  145 (337)
T 1r6d_A           74 LRGVDAIVHFAAESHVDRSIAGAS-VFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSID--SGSWTESSPL----  145 (337)
T ss_dssp             TTTCCEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCS--SSCBCTTSCC----
T ss_pred             hcCCCEEEECCCccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCC--CCCCCCCCCC----
Confidence            9999999999997543  112333 789999999999999999988 88999999998765432  3467777653    


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHH-HHcCCCcccccccccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNVKLKICCVMNRSHTL  236 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i  236 (249)
                           .|.+.|+.||..+|.+++.++.+++++++++||+++|||+...  ..++..+.. ...+.....++++++.++|+
T Consensus       146 -----~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  218 (337)
T 1r6d_A          146 -----EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (337)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC--CChHHHHHHHHhcCCCcEEeCCCCeeEeeE
Confidence                 3568899999999999999988789999999999999998643  233433333 34444333447788889999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|+|+++.+
T Consensus       219 ~v~Dva~a~~~  229 (337)
T 1r6d_A          219 HTDDHCRGIAL  229 (337)
T ss_dssp             EHHHHHHHHHH
T ss_pred             eHHHHHHHHHH
Confidence            99999999764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-34  Score=242.87  Aligned_cols=224  Identities=18%  Similarity=0.128  Sum_probs=172.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      .+++||||||+||||++++++|+++|++|++++|+...      .....+..+. ...+++++.+|++|++++.+++++ 
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSS------DTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS------CCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc------ccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc
Confidence            46799999999999999999999999999999998620      0011122111 123688999999999999999985 


Q ss_pred             -CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCc-ceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTV-KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                       +|+|||+||....  ...++. ..+++|+.++.++++++.+.+ + ++||++||..+|+..  ...+++|+++.     
T Consensus        86 ~~d~Vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~--~~~~~~E~~~~-----  156 (335)
T 1rpn_A           86 QPQEVYNLAAQSFVGASWNQPV-TTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLI--QAERQDENTPF-----  156 (335)
T ss_dssp             CCSEEEECCSCCCHHHHTTSHH-HHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSC--SSSSBCTTSCC-----
T ss_pred             CCCEEEECccccchhhhhhChH-HHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCC--CCCCCCcccCC-----
Confidence             7999999997543  134454 889999999999999999887 5 899999999876543  23467888763     


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC-CccH-HHHHHHHcCCCc-cccccccccccc
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSV-RSSLALILGNVK-LKICCVMNRSHT  235 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~-~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~  235 (249)
                          .|.+.|+.+|..+|.+++.++.+++++++++||+.+|||+..... ...+ ..+.....+... +.++++++.++|
T Consensus       157 ----~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~  232 (335)
T 1rpn_A          157 ----YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDW  232 (335)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEEC
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceece
Confidence                356789999999999999998878999999999999999864321 1112 233344455543 356788899999


Q ss_pred             chhhHHHhhhhc
Q 025660          236 LFVYAIAFAFAF  247 (249)
Q Consensus       236 i~v~d~a~a~~~  247 (249)
                      +|++|+|+++.+
T Consensus       233 i~v~Dva~a~~~  244 (335)
T 1rpn_A          233 GFAGDYVEAMWL  244 (335)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             EEHHHHHHHHHH
Confidence            999999999854

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-34  Score=245.85  Aligned_cols=224  Identities=18%  Similarity=0.210  Sum_probs=167.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--C
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--C   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~   83 (249)
                      |+|||||||||||++++++|+++|++|++++|....   ........+..    ..+++++.+|++|++++.+++++  +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~   74 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK---GATDNLHWLSS----LGNFEFVHGDIRNKNDVTRLITKYMP   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCST---THHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCcc---Cchhhhhhhcc----CCceEEEEcCCCCHHHHHHHHhccCC
Confidence            589999999999999999999999999999986410   00111222222    13578999999999999999987  9


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcc-eEEEEcccceeeccCCCc--------------cc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVK-RVVYTSSNAAVFYNDKDV--------------DM  146 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~--------------~~  146 (249)
                      |+|||+||....  ..+++. ..+++|+.++.++++++.+.+ ++ +||++||..+|+......              .+
T Consensus        75 d~vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~  152 (347)
T 1orr_A           75 DSCFHLAGQVAMTTSIDNPC-MDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNG  152 (347)
T ss_dssp             SEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTC
T ss_pred             CEEEECCcccChhhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccC
Confidence            999999997543  112443 789999999999999999987 54 999999998765432211              12


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC-CccHH-HHHHHHcCC---
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVR-SSLALILGN---  221 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~-~~~~~-~~~~~~~~~---  221 (249)
                      ++|+.+         ..|.+.|+.||..+|.+++.++.+++++++++||+.||||+..... ..++. .+.+...+.   
T Consensus       153 ~~e~~~---------~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (347)
T 1orr_A          153 YDESTQ---------LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGI  223 (347)
T ss_dssp             BCTTSC---------CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTC
T ss_pred             ccccCC---------CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccC
Confidence            444443         2356789999999999999998878999999999999999864321 12232 333444444   


Q ss_pred             --CcccccccccccccchhhHHHhhhhc
Q 025660          222 --VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 --~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ....++++++.++|+|++|+|.++.+
T Consensus       224 ~~~~~~~g~g~~~~~~i~v~Dva~a~~~  251 (347)
T 1orr_A          224 NKPFTISGNGKQVRDVLHAEDMISLYFT  251 (347)
T ss_dssp             CCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             CCCeEEecCCcceEeeEEHHHHHHHHHH
Confidence              23345788899999999999999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=2.7e-34  Score=241.25  Aligned_cols=217  Identities=26%  Similarity=0.292  Sum_probs=166.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+||||||+||||++++++|+++|++|++++|...       .....+   .   .+++++.+|++|++++.++++  ++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~-------~~~~~~---~---~~~~~~~~Dl~~~~~~~~~~~~~~~   67 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLAT-------GKRENV---P---KGVPFFRVDLRDKEGVERAFREFRP   67 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSS-------CCGGGS---C---TTCCEECCCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCc-------Cchhhc---c---cCeEEEECCCCCHHHHHHHHHhcCC
Confidence            37999999999999999999999999999988541       111111   1   246788999999999999998  79


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc-ceeeccCCCccccCCCCCCchhHhhh
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN-AAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~-~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      |+|||+|+....  ..+++. ..+++|+.++.++++++++.+ +++||++||. .+|+.. ....+++|+++.       
T Consensus        68 d~vi~~a~~~~~~~~~~~~~-~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~-~~~~~~~E~~~~-------  137 (311)
T 2p5y_A           68 THVSHQAAQASVKVSVEDPV-LDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEV-PEGERAEETWPP-------  137 (311)
T ss_dssp             SEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCC-CTTCCBCTTSCC-------
T ss_pred             CEEEECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCC-CCCCCcCCCCCC-------
Confidence            999999997543  123444 789999999999999999887 8899999998 554321 223467777653       


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC-CccHHHHHH-HHcCCCcccc-----ccccccc
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVRSSLA-LILGNVKLKI-----CCVMNRS  233 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~-~~~~~~~~~-~~~~~~~~~~-----~~~~~~~  233 (249)
                        .|.+.|+.||.++|.+++.++.+++++++++||+++|||+..... ..++..+.+ ...+.....+     +++.+.+
T Consensus       138 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  215 (311)
T 2p5y_A          138 --RPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVR  215 (311)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEE
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEE
Confidence              356789999999999999998878999999999999999865432 223333333 3344433334     6677889


Q ss_pred             ccchhhHHHhhhhc
Q 025660          234 HTLFVYAIAFAFAF  247 (249)
Q Consensus       234 ~~i~v~d~a~a~~~  247 (249)
                      +|+|++|+|+++.+
T Consensus       216 ~~i~v~Dva~a~~~  229 (311)
T 2p5y_A          216 DYVYVGDVAEAHAL  229 (311)
T ss_dssp             CEEEHHHHHHHHHH
T ss_pred             eeEEHHHHHHHHHH
Confidence            99999999999764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=9.3e-34  Score=242.49  Aligned_cols=221  Identities=19%  Similarity=0.220  Sum_probs=169.6

Q ss_pred             eEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      +||||||+||||++++++|+++ |++|++++|+..      ....+.+.++.. ..+++++.+|++|++++.++++  ++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~------~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~   74 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTY------AGNLESLSDISE-SNRYNFEHADICDSAEITRIFEQYQP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCT------TCCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCC------CCchhhhhhhhc-CCCeEEEECCCCCHHHHHHHHhhcCC
Confidence            6999999999999999999998 799999999751      011222222221 3468999999999999999998  89


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcc-------eEEEEcccceeeccCCCcc-------
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKS--GTVK-------RVVYTSSNAAVFYNDKDVD-------  145 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~-------~~v~~SS~~~~~~~~~~~~-------  145 (249)
                      |+|||+||....  ...++. .++++|+.++.++++++.+.  + ++       +||++||..+|+.......       
T Consensus        75 d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~  152 (361)
T 1kew_A           75 DAVMHLAAESHVDRSITGPA-AFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL  152 (361)
T ss_dssp             SEEEECCSCCCHHHHHHCTH-HHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC
T ss_pred             CEEEECCCCcChhhhhhCHH-HHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccC
Confidence            999999997542  112343 78999999999999999987  6 65       9999999987653321111       


Q ss_pred             -ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHH-HHHHHcCCCc
Q 025660          146 -MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRS-SLALILGNVK  223 (249)
Q Consensus       146 -~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~  223 (249)
                       +++|+++.         .|.+.|+.||..+|.+++.++.+++++++++||+.||||+...  ..++.. +.....+...
T Consensus       153 ~~~~E~~~~---------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~  221 (361)
T 1kew_A          153 PLFTETTAY---------APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPL  221 (361)
T ss_dssp             CCBCTTSCC---------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCE
T ss_pred             CCCCCCCCC---------CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc--ccHHHHHHHHHHcCCCc
Confidence             56777653         3568899999999999999988789999999999999998643  233333 3344445444


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ..++.+.+.++|+|++|+|+++++
T Consensus       222 ~~~~~~~~~~~~i~v~Dva~a~~~  245 (361)
T 1kew_A          222 PIYGKGDQIRDWLYVEDHARALHM  245 (361)
T ss_dssp             EEETTSCCEEEEEEHHHHHHHHHH
T ss_pred             eEcCCCceeEeeEEHHHHHHHHHH
Confidence            445778888999999999999865

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.7e-34  Score=229.93  Aligned_cols=203  Identities=23%  Similarity=0.242  Sum_probs=156.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+ +||+|||||||||||++++++|+++|++|++++|++        ++...+      ..+++++.+|++|++++.+++
T Consensus         1 M~-~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~------~~~~~~~~~Dl~d~~~~~~~~   65 (227)
T 3dhn_A            1 ME-KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP--------EKIKIE------NEHLKVKKADVSSLDEVCEVC   65 (227)
T ss_dssp             ---CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG--------GGCCCC------CTTEEEECCCTTCHHHHHHHH
T ss_pred             CC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc--------ccchhc------cCceEEEEecCCCHHHHHHHh
Confidence            54 467999999999999999999999999999999987        222221      247899999999999999999


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +++|+|||+|+....   ++  ..+++|+.++.++++++++.+ +++||++||..+++..+..   ..|+.+        
T Consensus        66 ~~~d~vi~~a~~~~~---~~--~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~---~~~~~~--------  128 (227)
T 3dhn_A           66 KGADAVISAFNPGWN---NP--DIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGL---RLMDSG--------  128 (227)
T ss_dssp             TTCSEEEECCCC-----------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTE---EGGGTT--------
T ss_pred             cCCCEEEEeCcCCCC---Ch--hHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCC---ccccCC--------
Confidence            999999999987422   11  478899999999999999998 8899999999877665431   122222        


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhH
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                       ..|.+.|+.+|..+|.+++.+..+++++++++||+.+|||+.......         .+... .+..++. ++|+|++|
T Consensus       129 -~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~---------~~~~~-~~~~~~~-~~~i~~~D  196 (227)
T 3dhn_A          129 -EVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR---------LGKDD-MIVDIVG-NSHISVED  196 (227)
T ss_dssp             -CSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE---------EESSB-CCCCTTS-CCEEEHHH
T ss_pred             -cchHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee---------ecCCC-cccCCCC-CcEEeHHH
Confidence             235678999999999999998866899999999999999986532111         12221 1222222 89999999


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      +|+++.+
T Consensus       197 va~ai~~  203 (227)
T 3dhn_A          197 YAAAMID  203 (227)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=5.2e-34  Score=245.88  Aligned_cols=223  Identities=19%  Similarity=0.169  Sum_probs=165.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++|+||||||+||||++|+++|+++| ++|++++|+..       ...+.+.    ...+++++.+|++|++++.+++++
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-------~~~~~l~----~~~~v~~~~~Dl~d~~~l~~~~~~   99 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLS-------AEKINVP----DHPAVRFSETSITDDALLASLQDE   99 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTT-------CCGGGSC----CCTTEEEECSCTTCHHHHHHCCSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCC-------Cchhhcc----CCCceEEEECCCCCHHHHHHHhhC
Confidence            45789999999999999999999999 99999999861       1111121    124688999999999999999999


Q ss_pred             CCEEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccC--CCCCCchhH
Q 025660           83 CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD--ETFWSDVDY  157 (249)
Q Consensus        83 ~d~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~--e~~~~~~~~  157 (249)
                      +|+|||+|+.....  ..++. ..+++|+.++.+|++++++. + +++||++||..+|+..  ...+++  |+.+..   
T Consensus       100 ~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~--~~~~~~~~E~~~~~---  172 (377)
T 2q1s_A          100 YDYVFHLATYHGNQSSIHDPL-ADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEK--TFDDAKATEETDIV---  172 (377)
T ss_dssp             CSEEEECCCCSCHHHHHHCHH-HHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC----------------CCCCCC---
T ss_pred             CCEEEECCCccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCC--CCCCcCcccccccc---
Confidence            99999999975431  12343 78999999999999999988 7 8899999999876543  233566  665210   


Q ss_pred             hhhcC-CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCC---------CCC--CCccHHHHHHHHcCCC-cc
Q 025660          158 IRKLD-SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI---------CPK--FAGSVRSSLALILGNV-KL  224 (249)
Q Consensus       158 ~~~~~-~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~---------~~~--~~~~~~~~~~~~~~~~-~~  224 (249)
                         .. .|.+.|+.+|..+|.+++.++.+++++++++||+.||||+.         .+.  ...++..+......+. ..
T Consensus       173 ---~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  249 (377)
T 2q1s_A          173 ---SLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLP  249 (377)
T ss_dssp             ---CSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCC
T ss_pred             ---cccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeE
Confidence               01 35678999999999999999887899999999999999986         211  0234444444444444 44


Q ss_pred             cccccccccccchhhHHHhh-hhc
Q 025660          225 KICCVMNRSHTLFVYAIAFA-FAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a-~~~  247 (249)
                      .++++++.++|+|++|+|++ +.+
T Consensus       250 ~~g~g~~~~~~i~v~Dva~a~i~~  273 (377)
T 2q1s_A          250 LENGGVATRDFIFVEDVANGLIAC  273 (377)
T ss_dssp             CSGGGCCEECCEEHHHHHHHHHHH
T ss_pred             EeCCCCeEEeeEEHHHHHHHHHHH
Confidence            45788899999999999999 754

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=3.6e-34  Score=243.01  Aligned_cols=232  Identities=27%  Similarity=0.358  Sum_probs=171.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCC--CCCCCeEEE-EcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP--GASERLRIF-HADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~-~~Dl~~~~~~~~~~   80 (249)
                      ++++||||||+||||++++++|+++|++|++++|+.        ++...+....  ..+.+++++ .+|++|++++.+++
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   81 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA--------SKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc--------ccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH
Confidence            457999999999999999999999999999999986        3333222110  001367888 89999999999999


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHh-cCCcceEEEEcccceeeccCC--CccccCCCCCCchhH
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK-SGTVKRVVYTSSNAAVFYNDK--DVDMMDETFWSDVDY  157 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~-~~~~~~~v~~SS~~~~~~~~~--~~~~~~e~~~~~~~~  157 (249)
                      +++|+|||+||..... .++. .++++|+.++.++++++.+ .+ +++||++||..+++....  ...+++|+++.+...
T Consensus        82 ~~~d~vih~A~~~~~~-~~~~-~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  158 (342)
T 1y1p_A           82 KGAAGVAHIASVVSFS-NKYD-EVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESI  158 (342)
T ss_dssp             TTCSEEEECCCCCSCC-SCHH-HHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHH
T ss_pred             cCCCEEEEeCCCCCCC-CCHH-HHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhh
Confidence            9999999999986543 3454 7899999999999999985 45 789999999987653321  125778887543221


Q ss_pred             hhh-------cCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCCCCCCc-cHHHHHHHHcCCCccc-c
Q 025660          158 IRK-------LDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAG-SVRSSLALILGNVKLK-I  226 (249)
Q Consensus       158 ~~~-------~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~-~  226 (249)
                      ...       ...|.+.|+.||.++|.+++.+..++  +++++++||+++|||........ .+..+...+..+.... +
T Consensus       159 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (342)
T 1y1p_A          159 DKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL  238 (342)
T ss_dssp             HHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH
T ss_pred             hhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCcccc
Confidence            100       01235789999999999999988765  78999999999999987543222 4444444444444333 3


Q ss_pred             cccccccccchhhHHHhhhhc
Q 025660          227 CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +.+ +.++|+|++|+|+++.+
T Consensus       239 ~~~-~~~~~v~v~Dva~a~~~  258 (342)
T 1y1p_A          239 ALM-PPQYYVSAVDIGLLHLG  258 (342)
T ss_dssp             HTC-CSEEEEEHHHHHHHHHH
T ss_pred             ccC-CcCCEeEHHHHHHHHHH
Confidence            443 77899999999998754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=7.1e-34  Score=246.70  Aligned_cols=238  Identities=13%  Similarity=0.092  Sum_probs=168.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCccc--------CC----chhhhhhccCCCCCCCeEEEEcCCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH--------RN----SKDLSFLKNLPGASERLRIFHADLS   71 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~----~~~~~~l~~~~~~~~~~~~~~~Dl~   71 (249)
                      .+++|||||||||||++|+++|+++|++|++++|.......        ..    .+....+...  ...+++++.+|++
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~v~~~~~Dl~   87 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL--TGKSIELYVGDIC   87 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH--HCCCCEEEESCTT
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc--cCCceEEEECCCC
Confidence            46799999999999999999999999999999986410000        00    0001111101  1236789999999


Q ss_pred             ChhhHHHHHcC--CCEEEEccccCCC--CCCChH--HHhhhhHHhHHHHHHHHHHhcCCc-ceEEEEcccceeeccCCCc
Q 025660           72 HPDGFDAAIAG--CTGVLHVATPVDF--EDKEPE--EVITQRAINGTLGILKSCLKSGTV-KRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        72 ~~~~~~~~~~~--~d~vih~a~~~~~--~~~~~~--~~~~~~n~~~t~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~  144 (249)
                      |++++.+++++  +|+|||+||....  ...++.  ..++++|+.++.++++++.+.+ . ++||++||..+|+...   
T Consensus        88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~---  163 (404)
T 1i24_A           88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPN---  163 (404)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCS---
T ss_pred             CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCC---
Confidence            99999999987  9999999997543  112332  2478999999999999999887 5 5999999998765432   


Q ss_pred             cccCCCCCCchhH-----hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC-------------
Q 025660          145 DMMDETFWSDVDY-----IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-------------  206 (249)
Q Consensus       145 ~~~~e~~~~~~~~-----~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~-------------  206 (249)
                      .+++|+.+.....     ......|.+.|+.||.++|.+++.++.+++++++++||++||||+..+.             
T Consensus       164 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~  243 (404)
T 1i24_A          164 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD  243 (404)
T ss_dssp             SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred             CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence            3556652211000     0001345788999999999999998877899999999999999986421             


Q ss_pred             --CCccHH-HHHHHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          207 --FAGSVR-SSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       207 --~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ...++. ++.....+.....++++++.++|+|++|+|+++.+
T Consensus       244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~  287 (404)
T 1i24_A          244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEI  287 (404)
T ss_dssp             TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHH
Confidence              023333 33444444443345788889999999999998754

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=2.1e-33  Score=243.27  Aligned_cols=232  Identities=19%  Similarity=0.201  Sum_probs=170.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHH-HCCCeEEEEEcCCCCccc----CCchhhhh-hccCCCC--CCC---eEEEEcCCCCh
Q 025660            5 KGRVCVTGGTGFIASWLIMRLL-DHGYSVTTTVRSELDPEH----RNSKDLSF-LKNLPGA--SER---LRIFHADLSHP   73 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~----~~~~~~~~-l~~~~~~--~~~---~~~~~~Dl~~~   73 (249)
                      +|+||||||+||||++++++|+ ++|++|++++|+......    ...+.... ++.....  ..+   ++++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 999999999997621000    00011111 1222111  123   88999999999


Q ss_pred             hhHHHHHc--C-CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC-----C
Q 025660           74 DGFDAAIA--G-CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK-----D  143 (249)
Q Consensus        74 ~~~~~~~~--~-~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~-----~  143 (249)
                      +++.++++  + +|+|||+|+....  ...++. .++++|+.++.+|+++|++.+ +++||++||..+|+....     .
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~  159 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPL-KYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTN  159 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----C
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHH-HHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCccccccc
Confidence            99999997  6 9999999997643  112343 789999999999999999887 889999999887643321     1


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC-------CCccHHHHH-
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-------FAGSVRSSL-  215 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~-------~~~~~~~~~-  215 (249)
                      ..+++|+++.         .|.+.|+.||.++|.+++.++.+++++++++||++||||+....       ...++..+. 
T Consensus       160 ~~~~~E~~~~---------~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~  230 (397)
T 1gy8_A          160 AEPIDINAKK---------SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG  230 (397)
T ss_dssp             CCCBCTTSCC---------BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHH
T ss_pred             ccCcCccCCC---------CCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHH
Confidence            3577888763         35688999999999999999887899999999999999975321       233444444 


Q ss_pred             ----HHHcCCC-----------cccc-c------ccccccccchhhHHHhhhhc
Q 025660          216 ----ALILGNV-----------KLKI-C------CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       216 ----~~~~~~~-----------~~~~-~------~~~~~~~~i~v~d~a~a~~~  247 (249)
                          +...+..           .+.+ +      ++++.++|+|++|+|++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~  284 (397)
T 1gy8_A          231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHIL  284 (397)
T ss_dssp             HHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHH
Confidence                4444442           2322 3      57788999999999998753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=4.1e-33  Score=237.40  Aligned_cols=228  Identities=18%  Similarity=0.181  Sum_probs=170.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCccc--CCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH--RNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +|+||||||+||||++++++|+++|++|++++|+....+.  ...+..+.+...  .+.+++++.+|++|++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc--cCCceEEEECCCCCHHHHHHHHHh
Confidence            4689999999999999999999999999999987521000  011122222211  12367899999999999999998 


Q ss_pred             -CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           82 -GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        82 -~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                       ++|+|||+||....  ...++. .++++|+.++.++++++++.+ +++||++||..+|+..  ...+++|+++..    
T Consensus        80 ~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~--~~~~~~E~~~~~----  151 (348)
T 1ek6_A           80 YSFMAVIHFAGLKAVGESVQKPL-DYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNP--QYLPLDEAHPTG----  151 (348)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSC--SSSSBCTTSCCC----
T ss_pred             cCCCEEEECCCCcCccchhhchH-HHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCC--CCCCcCCCCCCC----
Confidence             79999999997543  112343 789999999999999999887 8899999999876432  345788887632    


Q ss_pred             hhcCCC-CchHHHHHHHHHHHHHHHHHH-cCCcEEEeecCeEeCCCCCCC--------CCccHHHHHHHHcC-CCcccc-
Q 025660          159 RKLDSW-GKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILG-NVKLKI-  226 (249)
Q Consensus       159 ~~~~~~-~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~-~~~~~~-  226 (249)
                           | .+.|+.||..+|.+++.++.+ .+++++++||+++|||.....        ...++..+.+...+ ++.+.+ 
T Consensus       152 -----p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (348)
T 1ek6_A          152 -----GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF  226 (348)
T ss_dssp             -----CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEe
Confidence                 4 678999999999999998876 239999999999999953211        13355566666653 333322 


Q ss_pred             c------ccccccccchhhHHHhhhhc
Q 025660          227 C------CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~------~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +      .+++.++|+|++|+|+++.+
T Consensus       227 g~~~~~~~g~~~~~~i~v~Dva~a~~~  253 (348)
T 1ek6_A          227 GNDYDTEDGTGVRDYIHVVDLAKGHIA  253 (348)
T ss_dssp             CSCSSSSSSSCEECEEEHHHHHHHHHH
T ss_pred             CCcccCCCCceEEeeEEHHHHHHHHHH
Confidence            2      56788999999999998754

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=2.7e-33  Score=237.96  Aligned_cols=223  Identities=20%  Similarity=0.226  Sum_probs=169.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh-hhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~   83 (249)
                      |+||||||+||||++++++|+++ |++|++++|+.        .....+..    ..+++++.+|++|. +.+.++++++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~--------~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS--------DAISRFLN----HPHFHFVEGDISIHSEWIEYHVKKC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC--------GGGGGGTT----CTTEEEEECCTTTCSHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCc--------chHHHhhc----CCCeEEEeccccCcHHHHHhhccCC
Confidence            47999999999999999999998 89999999987        33333221    23688999999985 5688889899


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+||....  ...++. .++++|+.++.++++++++.+  ++||++||..+|+...  ..+++|+++....  .+.
T Consensus        69 d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~--~~~~~e~~~~~~~--~~~  141 (345)
T 2bll_A           69 DVVLPLVAIATPIEYTRNPL-RVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCS--DKYFDEDHSNLIV--GPV  141 (345)
T ss_dssp             SEEEECBCCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCC--CSSBCTTTCCCBC--CCT
T ss_pred             CEEEEcccccCccchhcCHH-HHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCC--CCCcCCccccccc--Ccc
Confidence            999999997543  112343 788999999999999999876  7999999998765432  3456777643100  011


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC------CCccHH-HHHHHHcCCCcccccccccccc
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVR-SSLALILGNVKLKICCVMNRSH  234 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  234 (249)
                      ..|.+.|+.+|..+|.+++.++.+++++++++||+.||||+....      ...++. .+.....+.....++++++.++
T Consensus       142 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  221 (345)
T 2bll_A          142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  221 (345)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred             cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEE
Confidence            234668999999999999999887899999999999999986431      112233 3444455555445577888999


Q ss_pred             cchhhHHHhhhhc
Q 025660          235 TLFVYAIAFAFAF  247 (249)
Q Consensus       235 ~i~v~d~a~a~~~  247 (249)
                      |+|++|+|+++++
T Consensus       222 ~i~v~Dva~a~~~  234 (345)
T 2bll_A          222 FTDIRDGIEALYR  234 (345)
T ss_dssp             CEEHHHHHHHHHH
T ss_pred             EEEHHHHHHHHHH
Confidence            9999999999864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-33  Score=240.39  Aligned_cols=226  Identities=19%  Similarity=0.136  Sum_probs=170.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC--CCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      ++||||||+||||++++++|+++|++|++++|+...   ...+..+.+.....  ...+++++.+|++|++++.+++++ 
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSS---FNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS---CCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccc---cchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence            689999999999999999999999999999998621   00111222211000  124688999999999999999985 


Q ss_pred             -CCEEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhcCCc---ceEEEEcccceeeccCCCccccCCCCCCchh
Q 025660           83 -CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTV---KRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (249)
Q Consensus        83 -~d~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (249)
                       +|+||||||.....  .+++. ..+++|+.++.++++++.+.+ +   ++||++||..+|+...  ..+++|+++.   
T Consensus       102 ~~d~vih~A~~~~~~~~~~~~~-~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~--~~~~~E~~~~---  174 (375)
T 1t2a_A          102 KPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQ--EIPQKETTPF---  174 (375)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCS--SSSBCTTSCC---
T ss_pred             CCCEEEECCCcccccccccCHH-HHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCC--CCCCCccCCC---
Confidence             69999999975431  22343 789999999999999999887 5   7999999998765432  3567888763   


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC-Ccc-HHHHHHHHcCCCc-cccccccccc
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGS-VRSSLALILGNVK-LKICCVMNRS  233 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~~~~~~  233 (249)
                            .|.+.|+.+|..+|.+++.++.+++++++++||+.+|||+..... ... ...+.....+... +.++++++.+
T Consensus       175 ------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  248 (375)
T 1t2a_A          175 ------YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  248 (375)
T ss_dssp             ------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             ------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCcee
Confidence                  356789999999999999998888999999999999999854321 111 2233344556543 4567888999


Q ss_pred             ccchhhHHHhhhhc
Q 025660          234 HTLFVYAIAFAFAF  247 (249)
Q Consensus       234 ~~i~v~d~a~a~~~  247 (249)
                      +|+|++|+|+++..
T Consensus       249 ~~i~v~Dva~a~~~  262 (375)
T 1t2a_A          249 DWGHAKDYVEAMWL  262 (375)
T ss_dssp             CCEEHHHHHHHHHH
T ss_pred             eeEEHHHHHHHHHH
Confidence            99999999999754

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-33  Score=237.08  Aligned_cols=224  Identities=17%  Similarity=0.096  Sum_probs=167.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC----CCCCeEEEEcCCCChhhHHHHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG----ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ||+||||||+||||++++++|+++|++|++++|+...      .....+..+..    ...+++++.+|++|++++.+++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS------FNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRIL   74 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------------CCEEECCCCSSCHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc------cchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHH
Confidence            3689999999999999999999999999999998610      00111222111    1246889999999999999998


Q ss_pred             cC--CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCc---ceEEEEcccceeeccCCCccccCCCCCC
Q 025660           81 AG--CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTV---KRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (249)
Q Consensus        81 ~~--~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (249)
                      ++  +|+|||+||....  ..+++. ..+++|+.++.++++++.+.+ +   ++||++||..+|+..  ...+++|+++.
T Consensus        75 ~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~--~~~~~~E~~~~  150 (372)
T 1db3_A           75 REVQPDEVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLV--QEIPQKETTPF  150 (372)
T ss_dssp             HHHCCSEEEECCCCCTTTTTTSCHH-HHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTC--CSSSBCTTSCC
T ss_pred             HhcCCCEEEECCcccCccccccCHH-HHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCC--CCCCCCccCCC
Confidence            85  7999999997654  234444 788999999999999999887 6   799999999876433  23467787763


Q ss_pred             chhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC-CccHH-HHHHHHcCCC-cccccccc
Q 025660          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVR-SSLALILGNV-KLKICCVM  230 (249)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~-~~~~~-~~~~~~~~~~-~~~~~~~~  230 (249)
                               .|.+.|+.||..+|.+++.++.+++++++++||+.+|||+..... ...+. .+.....+.. .+.+++++
T Consensus       151 ---------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  221 (372)
T 1db3_A          151 ---------YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMD  221 (372)
T ss_dssp             ---------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTT
T ss_pred             ---------CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCC
Confidence                     356789999999999999998888999999999999999864321 11222 3333444544 34567888


Q ss_pred             cccccchhhHHHhhhhc
Q 025660          231 NRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~~  247 (249)
                      +.++|+|++|+|+++..
T Consensus       222 ~~~~~i~v~Dva~a~~~  238 (372)
T 1db3_A          222 SLRDWGHAKDYVKMQWM  238 (372)
T ss_dssp             CEECCEEHHHHHHHHHH
T ss_pred             ceeeeeEHHHHHHHHHH
Confidence            99999999999999854

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=4.9e-33  Score=233.98  Aligned_cols=210  Identities=18%  Similarity=0.183  Sum_probs=167.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            7 RVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      +||||||+||||++++++|+++  |++|++++|+..        ...          +++++.+|++|++++.++++  +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~--------~~~----------~~~~~~~D~~d~~~~~~~~~~~~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQR--------DTG----------GIKFITLDVSNRDEIDRAVEKYS   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCC--------CCT----------TCCEEECCTTCHHHHHHHHHHTT
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCc--------ccc----------CceEEEecCCCHHHHHHHHhhcC
Confidence            5899999999999999999999  899999998761        110          35688999999999999998  8


Q ss_pred             CCEEEEccccCCC-CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           83 CTGVLHVATPVDF-EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        83 ~d~vih~a~~~~~-~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      +|+|||+|+.... ...++. ..+++|+.++.++++++++.+ +++||++||..+|+.. ....+.+|+.+.        
T Consensus        63 ~d~vih~a~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~-~~~~~~~e~~~~--------  131 (317)
T 3ajr_A           63 IDAIFHLAGILSAKGEKDPA-LAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPE-TPKNKVPSITIT--------  131 (317)
T ss_dssp             CCEEEECCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTT-SCSSSBCSSSCC--------
T ss_pred             CcEEEECCcccCCccccChH-HHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCC-CCCCCccccccC--------
Confidence            9999999997542 112343 789999999999999999988 8899999999876543 223456666652        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC---CCccHHHHHHHHcCCCcccccccccccccchh
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK---FAGSVRSSLALILGNVKLKICCVMNRSHTLFV  238 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  238 (249)
                       .|.+.|+.||..+|.+++.+..+++++++++||+.+||+...+.   ...+...+.+.+.+++...+..++..++|+|+
T Consensus       132 -~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  210 (317)
T 3ajr_A          132 -RPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYM  210 (317)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEH
Confidence             36789999999999999998887899999999999999865332   12234455666666665556677888999999


Q ss_pred             hHHHhhhh
Q 025660          239 YAIAFAFA  246 (249)
Q Consensus       239 ~d~a~a~~  246 (249)
                      +|+|++++
T Consensus       211 ~Dva~a~~  218 (317)
T 3ajr_A          211 PDALKALV  218 (317)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999874

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.6e-33  Score=234.12  Aligned_cols=211  Identities=19%  Similarity=0.172  Sum_probs=162.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      ++|+|||||||||||++|+++|+++|+      +..        ..          ...++.+.+|++|++++.+++++ 
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~--------~~----------~~~~~~~~~D~~d~~~~~~~~~~~   60 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPG--------ED----------WVFVSSKDADLTDTAQTRALFEKV   60 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC------CTT--------CE----------EEECCTTTCCTTSHHHHHHHHHHS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC------ccc--------cc----------ccccCceecccCCHHHHHHHHhhc
Confidence            567999999999999999999999998      221        00          01233457999999999999986 


Q ss_pred             -CCEEEEccccCCC---CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           83 -CTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        83 -~d~vih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                       +|+|||+|+....   ...++. ..+++|+.++.+|+++|++.+ +++|||+||..+|+.  ....+++|+++...   
T Consensus        61 ~~d~Vih~A~~~~~~~~~~~~~~-~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~--~~~~~~~E~~~~~~---  133 (319)
T 4b8w_A           61 QPTHVIHLAAMVGGLFRNIKYNL-DFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPD--KTTYPIDETMIHNG---  133 (319)
T ss_dssp             CCSEEEECCCCCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCS--SCCSSBCGGGGGBS---
T ss_pred             CCCEEEECceecccccccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCC--CCCCCccccccccC---
Confidence             9999999998652   234554 789999999999999999998 899999999987643  23457777763210   


Q ss_pred             hhcCCCCc-hHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHHH-----HHcCCCcccccccc
Q 025660          159 RKLDSWGK-SYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLA-----LILGNVKLKICCVM  230 (249)
Q Consensus       159 ~~~~~~~~-~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~  230 (249)
                        ...|.+ .|+.+|..+|.+++.+.++++++++++||+++|||+....  ...++..+..     ...+.....+++++
T Consensus       134 --~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  211 (319)
T 4b8w_A          134 --PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGN  211 (319)
T ss_dssp             --CCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSC
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCC
Confidence              122344 5999999999999999888899999999999999987542  2233333333     33444444558889


Q ss_pred             cccccchhhHHHhhhhc
Q 025660          231 NRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~~  247 (249)
                      +.++|+|++|+|+++.+
T Consensus       212 ~~~~~i~v~Dva~a~~~  228 (319)
T 4b8w_A          212 PRRQFIYSLDLAQLFIW  228 (319)
T ss_dssp             CEECEEEHHHHHHHHHH
T ss_pred             eeEEEEeHHHHHHHHHH
Confidence            99999999999999854

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=6.7e-33  Score=228.29  Aligned_cols=171  Identities=22%  Similarity=0.255  Sum_probs=146.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|+||||||+|+||++++++|+++|++|++++|+..        +.        ...+++++.+|++|++++.++++++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~--------~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~   65 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPL--------DP--------AGPNEECVQCDLADANAVNAMVAGC   65 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCC--------CC--------CCTTEEEEECCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCc--------cc--------cCCCCEEEEcCCCCHHHHHHHHcCC
Confidence            3578999999999999999999999999999999871        11        1347899999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+||||||....  .++ +..+++|+.++.++++++++.+ .++||++||..+++.. ....+++|+.+.         .
T Consensus        66 D~vi~~Ag~~~~--~~~-~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~-~~~~~~~e~~~~---------~  131 (267)
T 3rft_A           66 DGIVHLGGISVE--KPF-EQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYY-PQTERLGPDVPA---------R  131 (267)
T ss_dssp             SEEEECCSCCSC--CCH-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTS-BTTSCBCTTSCC---------C
T ss_pred             CEEEECCCCcCc--CCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCC-CCCCCCCCCCCC---------C
Confidence            999999998432  344 4899999999999999999888 8899999999877543 334567777763         3


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCC
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~  204 (249)
                      |.+.|+.||...|.+++.++.++++++++|||+.|+|+...
T Consensus       132 ~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~  172 (267)
T 3rft_A          132 PDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN  172 (267)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCS
T ss_pred             CCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCC
Confidence            56889999999999999998888999999999999998543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=1.1e-33  Score=238.07  Aligned_cols=213  Identities=22%  Similarity=0.121  Sum_probs=160.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++|||||||||||++|+++|+++|++|++++|+.....    .....+.... ...+++++.+|++          ++
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~-~~~~~~~~~~Dl~----------~~   70 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPM----IPPEGTGKFL-EKPVLELEERDLS----------DV   70 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCS----SCCTTSSEEE-CSCGGGCCHHHHT----------TE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccc----cchhhhhhhc-cCCCeeEEeCccc----------cC
Confidence            4689999999999999999999999999999999871000    0111111110 0123445555555          89


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+....  ...++. ..++ |+.++.++++++++.+ +++|||+||..+|+..  ...+++|+++.        
T Consensus        71 d~vi~~a~~~~~~~~~~~~~-~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~--~~~~~~E~~~~--------  137 (321)
T 3vps_A           71 RLVYHLASHKSVPRSFKQPL-DYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQA--DTLPTPEDSPL--------  137 (321)
T ss_dssp             EEEEECCCCCCHHHHTTSTT-TTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC--SSSSBCTTSCC--------
T ss_pred             CEEEECCccCChHHHHhCHH-HHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCC--CCCCCCCCCCC--------
Confidence            999999997653  223333 5566 9999999999999998 8999999999876543  34578888763        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCC-cEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC-Ccccccccccccccchhh
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGL-DLVTLIPSMVVGPFICPKFAGSVRSSLALILGN-VKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~  239 (249)
                       .|.+.|+.+|..+|.+++.+..++++ +++++||+.+|||+...  ..++..+......+ ....+++++..++|+|++
T Consensus       138 -~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  214 (321)
T 3vps_A          138 -SPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP--DALVPRLCANLLTRNELPVEGDGEQRRDFTYIT  214 (321)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHH
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC--CChHHHHHHHHHcCCCeEEeCCCCceEceEEHH
Confidence             36789999999999999999988899 99999999999998654  33444444444444 444557788999999999


Q ss_pred             HHHhhhhc
Q 025660          240 AIAFAFAF  247 (249)
Q Consensus       240 d~a~a~~~  247 (249)
                      |+|+++++
T Consensus       215 Dva~~~~~  222 (321)
T 3vps_A          215 DVVDKLVA  222 (321)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999865

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.5e-32  Score=233.29  Aligned_cols=224  Identities=17%  Similarity=0.089  Sum_probs=170.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      ++|+||||||+||||++++++|+++|++|++++|+..     . .....+..... ..+++++.+|++|++++.+++++ 
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-----~-~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG-----E-FASWRLKELGI-ENDVKIIHMDLLEFSNIIRTIEKV   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS-----T-TTTHHHHHTTC-TTTEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc-----c-cccccHhhccc-cCceeEEECCCCCHHHHHHHHHhc
Confidence            3578999999999999999999999999999999862     0 00112222211 23688999999999999999985 


Q ss_pred             -CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCc-ceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTV-KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                       +|+|||+||....  ..+++. ..+++|+.++.++++++.+.+ + ++||++||..+|+..  ...+++|+.+.     
T Consensus        75 ~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~--~~~~~~e~~~~-----  145 (345)
T 2z1m_A           75 QPDEVYNLAAQSFVGVSFEQPI-LTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKV--QEIPQTEKTPF-----  145 (345)
T ss_dssp             CCSEEEECCCCCCHHHHTTSHH-HHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSC--SSSSBCTTSCC-----
T ss_pred             CCCEEEECCCCcchhhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCC--CCCCCCccCCC-----
Confidence             6999999997543  134454 889999999999999999877 5 899999999876543  23467777653     


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC-Ccc-HHHHHHHHcCCCc-cccccccccccc
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGS-VRSSLALILGNVK-LKICCVMNRSHT  235 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~  235 (249)
                          .|.+.|+.||..+|.+++.++.+++++++++|+.++|||+..... ... ...+.+...+... ..++.+...++|
T Consensus       146 ----~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (345)
T 2z1m_A          146 ----YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDW  221 (345)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECC
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeee
Confidence                356789999999999999998888999999999999999854321 111 1123333445433 345777888999


Q ss_pred             chhhHHHhhhhc
Q 025660          236 LFVYAIAFAFAF  247 (249)
Q Consensus       236 i~v~d~a~a~~~  247 (249)
                      +|++|+|+++.+
T Consensus       222 ~~v~Dva~a~~~  233 (345)
T 2z1m_A          222 GYAPEYVEAMWL  233 (345)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             EEHHHHHHHHHH
Confidence            999999999865

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=7.4e-32  Score=228.37  Aligned_cols=211  Identities=20%  Similarity=0.186  Sum_probs=161.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|+||||||+||||++|+++|+++|++|++++|+..       ...+.+..+    .+++++.+|++|++++.++++  
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~   87 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT-------GKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF   87 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSS-------SCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCc-------cchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc
Confidence            4579999999999999999999999999999999751       111111121    368899999999999999999  


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      ++|+||||||.......+.. . +++|+.++.++++++.+.+ +++||++||..+|+.......+++|++          
T Consensus        88 ~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~----------  154 (330)
T 2pzm_A           88 KPTHVVHSAAAYKDPDDWAE-D-AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT----------  154 (330)
T ss_dssp             CCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC----------
T ss_pred             CCCEEEECCccCCCccccCh-h-HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC----------
Confidence            99999999998654211222 3 8999999999999999888 889999999987643322112666665          


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                       .|.+.|+.+|..+|.+++.+    +++++++||+++|||+..   ..++..+......+. ..++.+. .++|+|++|+
T Consensus       155 -~~~~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~---~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dv  224 (330)
T 2pzm_A          155 -APFTSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA---IGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDF  224 (330)
T ss_dssp             -CCCSHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC---SSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHH
T ss_pred             -CCCChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC---CCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHH
Confidence             14678999999999998875    799999999999999852   233333334333333 3445666 8899999999


Q ss_pred             Hh-hhhcc
Q 025660          242 AF-AFAFN  248 (249)
Q Consensus       242 a~-a~~~~  248 (249)
                      |+ ++.+.
T Consensus       225 a~~a~~~~  232 (330)
T 2pzm_A          225 LAIADLSL  232 (330)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
Confidence            99 88653

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.8e-32  Score=234.37  Aligned_cols=215  Identities=18%  Similarity=0.167  Sum_probs=167.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +|+||||||+||||++|+++|+++| ++|++++|+.        .... +..+.    ++. +.+|+++++.+.++++  
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~--------~~~~-~~~~~----~~~-~~~d~~~~~~~~~~~~~~  111 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK--------DGTK-FVNLV----DLN-IADYMDKEDFLIQIMAGE  111 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCS--------SGGG-GGGTT----TSC-CSEEEEHHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCC--------Ccch-hhccc----Cce-EeeecCcHHHHHHHHhhc
Confidence            4789999999999999999999999 9999999976        2111 11111    122 6789999999999997  


Q ss_pred             ---CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           82 ---GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        82 ---~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                         ++|+|||+|+.......++. .++++|+.++.++++++.+.+ + +||++||..+|+..  ...+++|+++.     
T Consensus       112 ~~~~~d~Vih~A~~~~~~~~~~~-~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~--~~~~~~E~~~~-----  181 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGR--TSDFIESREYE-----  181 (357)
T ss_dssp             CCSSCCEEEECCSCCCTTCCCHH-HHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSC--SSCCCSSGGGC-----
T ss_pred             ccCCCCEEEECCcccCCccCCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCC--CCCCcCCcCCC-----
Confidence               49999999998665444554 899999999999999999988 7 99999999876433  23467777653     


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHHHHHcCCCc-cccccccc-ccc
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGNVK-LKICCVMN-RSH  234 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~  234 (249)
                          .|.+.|+.+|..+|.+++.++.+++++++++||++||||+....  ...++..+.+.+..+.. ..++++.. .++
T Consensus       182 ----~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (357)
T 2x6t_A          182 ----KPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD  257 (357)
T ss_dssp             ----CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEEC
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEc
Confidence                35788999999999999999877799999999999999986432  12344444444444443 34567778 899


Q ss_pred             cchhhHHHhhhhc
Q 025660          235 TLFVYAIAFAFAF  247 (249)
Q Consensus       235 ~i~v~d~a~a~~~  247 (249)
                      |+|++|+|+++.+
T Consensus       258 ~i~v~Dva~ai~~  270 (357)
T 2x6t_A          258 FVYVGDVADVNLW  270 (357)
T ss_dssp             EEEHHHHHHHHHH
T ss_pred             cEEHHHHHHHHHH
Confidence            9999999999864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=4.6e-32  Score=230.71  Aligned_cols=222  Identities=18%  Similarity=0.223  Sum_probs=166.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|+|||||||||||++|+++|+++|++|++++|+..       .....+.... ...++.++.+|+.+..     +.++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~~~~-~~~~~~~~~~D~~~~~-----~~~~   92 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT-------GRKRNVEHWI-GHENFELINHDVVEPL-----YIEV   92 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS-------CCGGGTGGGT-TCTTEEEEECCTTSCC-----CCCC
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCc-------cchhhhhhhc-cCCceEEEeCccCChh-----hcCC
Confidence            4578999999999999999999999999999999751       0111111111 1236889999999864     5689


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+....  ...++. ..+++|+.++.++++++++.+ . +||++||..+|+..  ...+++|+.+....    .
T Consensus        93 d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~--~~~~~~E~~~~~~~----~  163 (343)
T 2b69_A           93 DQIYHLASPASPPNYMYNPI-KTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDP--EVHPQSEDYWGHVN----P  163 (343)
T ss_dssp             SEEEECCSCCSHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSC--SSSSBCTTCCCBCC----S
T ss_pred             CEEEECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCC--CCCCCcccccccCC----C
Confidence            999999997543  123454 788999999999999999988 5 99999998876433  23467776432211    1


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHH-HHHHHHcCCCcccccccccccccchhhH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR-SSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                      ..|.+.|+.+|..+|.+++.++.+++++++++||+.+|||+.......++. ++.....+.....++++++.++|+|++|
T Consensus       164 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  243 (343)
T 2b69_A          164 IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSD  243 (343)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHH
Confidence            235678999999999999998887899999999999999986543233333 3444555555445677888999999999


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      +|+++.+
T Consensus       244 va~a~~~  250 (343)
T 2b69_A          244 LVNGLVA  250 (343)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-32  Score=228.71  Aligned_cols=213  Identities=18%  Similarity=0.177  Sum_probs=160.3

Q ss_pred             eEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC---
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG---   82 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   82 (249)
                      +||||||+||||++++++|+++| ++|++++|+..     . .....+..       +. +.+|+++.+.+.+++++   
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-----~-~~~~~~~~-------~~-~~~d~~~~~~~~~~~~~~~~   66 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-----G-TKFVNLVD-------LN-IADYMDKEDFLIQIMAGEEF   66 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS-----G-GGGHHHHT-------SC-CSEEEEHHHHHHHHHTTCCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCC-----C-chhhhcCc-------ce-eccccccHHHHHHHHhcccc
Confidence            58999999999999999999999 99999999761     0 11222222       12 67899999999999975   


Q ss_pred             --CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           83 --CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        83 --~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                        +|+|||+|+.......++. .++++|+.++.++++++++.+ + +||++||..+|+..  ...+++|+++.       
T Consensus        67 ~~~d~vi~~a~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~--~~~~~~E~~~~-------  134 (310)
T 1eq2_A           67 GDVEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGR--TSDFIESREYE-------  134 (310)
T ss_dssp             SSCCEEEECCSCCCTTCCCHH-HHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTC--CSCBCSSGGGC-------
T ss_pred             CCCcEEEECcccccCcccCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCC--CCCCCCCCCCC-------
Confidence              9999999998765444554 889999999999999999998 7 99999999876433  23367777653       


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHHHHHcCCCcc-ccccccc-ccccc
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGNVKL-KICCVMN-RSHTL  236 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i  236 (249)
                        .|.+.|+.+|..+|.+++.+..+++++++++||+++|||+....  ...++..+.+.+..+..+ .++++.+ .++|+
T Consensus       135 --~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i  212 (310)
T 1eq2_A          135 --KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV  212 (310)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEE
T ss_pred             --CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccE
Confidence              36788999999999999998877899999999999999986421  223444454444444443 4567788 89999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|+|+++.+
T Consensus       213 ~v~Dva~~~~~  223 (310)
T 1eq2_A          213 YVGDVADVNLW  223 (310)
T ss_dssp             EHHHHHHHHHH
T ss_pred             EHHHHHHHHHH
Confidence            99999999864

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=2.4e-32  Score=235.59  Aligned_cols=225  Identities=18%  Similarity=0.127  Sum_probs=168.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC-CCCCC-CeEEEEcCCCChhhHHHHHcC-
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-PGASE-RLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~-~~~~~-~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      ++||||||+||||++|+++|+++|++|++++|+....   .....+.+... ..... +++++.+|++|++++.+++++ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNF---NTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC---CCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccc---cchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc
Confidence            6899999999999999999999999999999986200   00011111110 00112 688999999999999999985 


Q ss_pred             -CCEEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhcCCcc-----eEEEEcccceeeccCCCccccCCCCCCc
Q 025660           83 -CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVK-----RVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (249)
Q Consensus        83 -~d~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (249)
                       +|+|||+||.....  ..++. ..+++|+.++.+|++++.+.+ ++     +||++||..+|+...  . +++|+++. 
T Consensus       106 ~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~--~-~~~E~~~~-  179 (381)
T 1n7h_A          106 KPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTP--P-PQSETTPF-  179 (381)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSC--S-SBCTTSCC-
T ss_pred             CCCEEEECCcccCccccccCHH-HHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCC--C-CCCCCCCC-
Confidence             69999999975431  12343 789999999999999998875 44     999999998765432  2 77888763 


Q ss_pred             hhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC-Ccc-HHHHHHHHcCCCc-cccccccc
Q 025660          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGS-VRSSLALILGNVK-LKICCVMN  231 (249)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~~~~  231 (249)
                              .|.+.|+.+|..+|.+++.++.+++++++++|++++|||+..... ... ...+.....+... +.++.+++
T Consensus       180 --------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  251 (381)
T 1n7h_A          180 --------HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQA  251 (381)
T ss_dssp             --------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTC
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCc
Confidence                    356889999999999999998878999999999999999864321 111 1233344455543 34577888


Q ss_pred             ccccchhhHHHhhhhc
Q 025660          232 RSHTLFVYAIAFAFAF  247 (249)
Q Consensus       232 ~~~~i~v~d~a~a~~~  247 (249)
                      .++|+|++|+|+++.+
T Consensus       252 ~~~~v~v~Dva~a~~~  267 (381)
T 1n7h_A          252 SRDWGFAGDYVEAMWL  267 (381)
T ss_dssp             EEECEEHHHHHHHHHH
T ss_pred             eeeeEEHHHHHHHHHH
Confidence            9999999999999864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=4.7e-33  Score=231.11  Aligned_cols=193  Identities=16%  Similarity=0.078  Sum_probs=154.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-C   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~   83 (249)
                      +|+||||| +||||++|+++|+++|++|++++|+..        .         ...+++++.+|++|++++.+++++ +
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~--------~---------~~~~~~~~~~Dl~d~~~~~~~~~~~~   64 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQ--------P---------MPAGVQTLIADVTRPDTLASIVHLRP   64 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTS--------C---------CCTTCCEEECCTTCGGGCTTGGGGCC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcc--------c---------cccCCceEEccCCChHHHHHhhcCCC
Confidence            56899999 599999999999999999999999871        1         124678999999999999999987 9


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+|||+|+....   ++. .++++|+.++.++++++++.+ +++|||+||..+|+..  ...+++|+++.         .
T Consensus        65 d~vih~a~~~~~---~~~-~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~---------~  128 (286)
T 3gpi_A           65 EILVYCVAASEY---SDE-HYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQE--VEEWLDEDTPP---------I  128 (286)
T ss_dssp             SEEEECHHHHHH---C------CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCC--CSSEECTTSCC---------C
T ss_pred             CEEEEeCCCCCC---CHH-HHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCC--CCCCCCCCCCC---------C
Confidence            999999997432   233 678899999999999999887 8999999999876543  34577888764         3


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHh
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAF  243 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~  243 (249)
                      |.+.|+.+|..+|.+ +.+     ++++++||+++|||+..        .+...+..  ...++.++..++|+|++|+|+
T Consensus       129 p~~~Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~--------~~~~~~~~--~~~~~~~~~~~~~i~v~Dva~  192 (286)
T 3gpi_A          129 AKDFSGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL--------RMIRQAQT--PEQWPARNAWTNRIHRDDGAA  192 (286)
T ss_dssp             CCSHHHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC--------HHHHHTTC--GGGSCSSBCEECEEEHHHHHH
T ss_pred             CCChhhHHHHHHHHH-Hhc-----CCeEEEecccccCCCch--------hHHHHHHh--cccCCCcCceeEEEEHHHHHH
Confidence            678999999999999 553     89999999999999754        22233333  223477788899999999999


Q ss_pred             hhhc
Q 025660          244 AFAF  247 (249)
Q Consensus       244 a~~~  247 (249)
                      ++.+
T Consensus       193 ~~~~  196 (286)
T 3gpi_A          193 FIAY  196 (286)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=2.6e-32  Score=229.94  Aligned_cols=207  Identities=16%  Similarity=0.116  Sum_probs=161.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      +|+||||||+||||++|+++|+++|++|++++|+.                           .+|++|++++.++++  +
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------~~D~~d~~~~~~~~~~~~   55 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFASER   55 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------cCCccCHHHHHHHHHhcC
Confidence            46899999999999999999999999999987764                           279999999999998  8


Q ss_pred             CCEEEEccccCCC---CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           83 CTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        83 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      +|+|||+|+....   ...++. .++++|+.++.++++++++.+ +++|||+||..+|+..  ...+++|+++...    
T Consensus        56 ~d~vih~a~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~~~----  127 (321)
T 1e6u_A           56 IDQVYLAAAKVGGIVANNTYPA-DFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKL--AKQPMAESELLQG----  127 (321)
T ss_dssp             CSEEEECCCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTT--CCSSBCGGGTTSS----
T ss_pred             CCEEEEcCeecCCcchhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCC--CCCCcCccccccC----
Confidence            9999999997642   122343 788999999999999999988 8899999999876543  2346777763210    


Q ss_pred             hcCCC-CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHHHHH-----cCCCcc-cccccc
Q 025660          160 KLDSW-GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALI-----LGNVKL-KICCVM  230 (249)
Q Consensus       160 ~~~~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~~~~-----~~~~~~-~~~~~~  230 (249)
                       ...| .+.|+.+|..+|.+++.++.+++++++++||+.+|||+....  ...++..+...+     .|...+ .+++++
T Consensus       128 -~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~  206 (321)
T 1e6u_A          128 -TLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT  206 (321)
T ss_dssp             -CCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC
T ss_pred             -CCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCC
Confidence             0123 258999999999999999887899999999999999987532  123343333332     232444 357788


Q ss_pred             cccccchhhHHHhhhhc
Q 025660          231 NRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~~  247 (249)
                      +.++|+|++|+|+++..
T Consensus       207 ~~~~~i~v~Dva~~~~~  223 (321)
T 1e6u_A          207 PMREFLHVDDMAAASIH  223 (321)
T ss_dssp             CEECEEEHHHHHHHHHH
T ss_pred             EEEEeEEHHHHHHHHHH
Confidence            89999999999998754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=6.1e-32  Score=229.32  Aligned_cols=224  Identities=19%  Similarity=0.188  Sum_probs=165.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+||||||+||||++++++|+++|++|++++|...    ...+....+....  +.++.++.+|++|++++.++++  ++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   74 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCN----SKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCC----cchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCC
Confidence            37999999999999999999999999999987541    0011122222111  1357889999999999999987  49


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+||....  ...++. .++++|+.++.++++++++.+ +++||++||..+|+..  ...+++|+.+..       
T Consensus        75 D~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~--~~~~~~e~~~~~-------  143 (338)
T 1udb_A           75 DTVIHFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDN--PKIPYVESFPTG-------  143 (338)
T ss_dssp             SEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC--CSSSBCTTSCCC-------
T ss_pred             CEEEECCccCccccchhcHH-HHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCC--CCCCcCcccCCC-------
Confidence            999999997543  112333 788999999999999999887 7899999999876432  234677776532       


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHc-CCcEEEeecCeEeCCCCCCC--------CCccHHHHHHHHcCC-Ccccc-----
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGN-VKLKI-----  226 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~-~~~~~-----  226 (249)
                       ++.+.|+.||.++|.+++.++.++ +++++++||+++|||.....        ...+...+.+...+. +.+..     
T Consensus       144 -~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  222 (338)
T 1udb_A          144 -TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcc
Confidence             126789999999999999998776 89999999999999953211        123455555555533 22222     


Q ss_pred             --cccccccccchhhHHHhhhhc
Q 025660          227 --CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 --~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        .++.+.++|+|++|+|+++..
T Consensus       223 ~~~~g~~~~~~i~v~Dva~a~~~  245 (338)
T 1udb_A          223 PTEDGTGVRDYIHVMDLADGHVV  245 (338)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHH
T ss_pred             cCCCCceeeeeEEHHHHHHHHHH
Confidence              256778899999999998653

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=2.1e-32  Score=233.16  Aligned_cols=203  Identities=17%  Similarity=0.193  Sum_probs=162.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+||||||||+||++++++|+++ |+ +|++++|++        .+...+..... ..++.++.+|++|.+++.++++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~--------~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~   90 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE--------LKQSEMAMEFN-DPRMRFFIGDVRDLERLNYALE   90 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH--------HHHHHHHHHHC-CTTEEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh--------hhHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHh
Confidence            4579999999999999999999999 97 999999986        44333321111 1468999999999999999999


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++|+|||+||....  ...++. ..+++|+.|+.++++++.+.+ +++||++||..++.                     
T Consensus        91 ~~D~Vih~Aa~~~~~~~~~~~~-~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~~---------------------  147 (344)
T 2gn4_A           91 GVDICIHAAALKHVPIAEYNPL-ECIKTNIMGASNVINACLKNA-ISQVIALSTDKAAN---------------------  147 (344)
T ss_dssp             TCSEEEECCCCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSS---------------------
T ss_pred             cCCEEEECCCCCCCCchhcCHH-HHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccCC---------------------
Confidence            99999999997543  122344 789999999999999999998 89999999965421                     


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-ccccccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KLKICCVMNRSHT  235 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  235 (249)
                          |.+.|+.||.++|.+++.++.+   .+++++++|||+||||..     .++..+.+.+..+. ++.+.++...++|
T Consensus       148 ----p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-----~~i~~~~~~~~~g~~~~~i~~~~~~r~~  218 (344)
T 2gn4_A          148 ----PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-----SVVPFFKKLVQNKASEIPITDIRMTRFW  218 (344)
T ss_dssp             ----CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT-----SHHHHHHHHHHHTCCCEEESCTTCEEEE
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC-----CHHHHHHHHHHcCCCceEEeCCCeEEee
Confidence                2467999999999999988753   479999999999999863     23445555444444 5666677888999


Q ss_pred             chhhHHHhhhhc
Q 025660          236 LFVYAIAFAFAF  247 (249)
Q Consensus       236 i~v~d~a~a~~~  247 (249)
                      +|++|+|.++.+
T Consensus       219 i~v~D~a~~v~~  230 (344)
T 2gn4_A          219 ITLDEGVSFVLK  230 (344)
T ss_dssp             ECHHHHHHHHHH
T ss_pred             EEHHHHHHHHHH
Confidence            999999999865

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=2.9e-31  Score=225.04  Aligned_cols=208  Identities=23%  Similarity=0.181  Sum_probs=158.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      ++|+||||||+||||++++++|+++|++|++++|+..       ...+.+...    .+++++.+|++|++++.+++++ 
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~l~~~----~~~~~~~~Dl~d~~~~~~~~~~~   88 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT-------GRREHLKDH----PNLTFVEGSIADHALVNQLIGDL   88 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS-------CCGGGSCCC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc-------cchhhHhhc----CCceEEEEeCCCHHHHHHHHhcc
Confidence            4679999999999999999999999999999999761       111222221    3688999999999999999987 


Q ss_pred             -CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeecc--CCCccccCCCCCCchhHhh
Q 025660           83 -CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYN--DKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        83 -~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~--~~~~~~~~e~~~~~~~~~~  159 (249)
                       +|+|||+||.......... . +++|+.++.++++++.+.+ +++||++||..+|+..  .... +++|++        
T Consensus        89 ~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--------  156 (333)
T 2q1w_A           89 QPDAVVHTAASYKDPDDWYN-D-TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPV-RLDHPR--------  156 (333)
T ss_dssp             CCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSB-CTTSCC--------
T ss_pred             CCcEEEECceecCCCccCCh-H-HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCC-CcCCCC--------
Confidence             9999999998654211122 3 8999999999999999987 8899999998876411  1112 666664        


Q ss_pred             hcCCCC-chHHHHHHHHHHHHHH-HHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccch
Q 025660          160 KLDSWG-KSYAISKTLTERAALE-FAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLF  237 (249)
Q Consensus       160 ~~~~~~-~~Y~~sK~~~e~~~~~-~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (249)
                         .|. +.|+.+|..+|.+++. +.     +++++||+++|||+..   ..++..+.+....+. ..++ +.+.++|+|
T Consensus       157 ---~p~~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~---~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~  223 (333)
T 2q1w_A          157 ---NPANSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV---SGPLPIFFQRLSEGK-KCFV-TKARRDFVF  223 (333)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC---SSHHHHHHHHHHTTC-CCEE-EECEECEEE
T ss_pred             ---CCCCCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc---CcHHHHHHHHHHcCC-eeeC-CCceEeeEE
Confidence               135 7899999999999987 54     8999999999999832   234433433333333 3345 678899999


Q ss_pred             hhHHHhhhhc
Q 025660          238 VYAIAFAFAF  247 (249)
Q Consensus       238 v~d~a~a~~~  247 (249)
                      ++|+|.++.+
T Consensus       224 v~Dva~ai~~  233 (333)
T 2q1w_A          224 VKDLARATVR  233 (333)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999865

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.98  E-value=1.5e-31  Score=222.04  Aligned_cols=191  Identities=16%  Similarity=0.148  Sum_probs=157.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+|||||||||||++++++|+++|++|++++|..                            +|++|++++.++++  ++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------------~D~~d~~~~~~~~~~~~~   57 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL----------------------------LDITNISQVQQVVQEIRP   57 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT----------------------------SCTTCHHHHHHHHHHHCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc----------------------------cCCCCHHHHHHHHHhcCC
Confidence            3899999999999999999999999999998843                            89999999999998  69


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+....  ...++. ..+++|+.++.++++++++.+ . +|||+||..+|+..  ...+++|+++.        
T Consensus        58 d~vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~--~~~~~~E~~~~--------  124 (287)
T 3sc6_A           58 HIIIHCAAYTKVDQAEKERD-LAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGD--RPEGYDEFHNP--------  124 (287)
T ss_dssp             SEEEECCCCCCHHHHTTCHH-HHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCC--CSSCBCTTSCC--------
T ss_pred             CEEEECCcccChHHHhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCC--CCCCCCCCCCC--------
Confidence            999999998654  224454 899999999999999999998 5 79999999876543  34578888763        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                       .|.+.|+.+|..+|.+++.+.    .+++++||+.+|||+..    .++..+.+....+..+.+. +++.++|+|++|+
T Consensus       125 -~p~~~Y~~sK~~~E~~~~~~~----~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dv  194 (287)
T 3sc6_A          125 -APINIYGASKYAGEQFVKELH----NKYFIVRTSWLYGKYGN----NFVKTMIRLGKEREEISVV-ADQIGSPTYVADL  194 (287)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHTTCSEEEEE-CSCEECCEEHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHhC----CCcEEEeeeeecCCCCC----cHHHHHHHHHHcCCCeEee-cCcccCceEHHHH
Confidence             367899999999999998863    47899999999999753    3455566666655555443 3588899999999


Q ss_pred             Hhhhhc
Q 025660          242 AFAFAF  247 (249)
Q Consensus       242 a~a~~~  247 (249)
                      |+++.+
T Consensus       195 a~~~~~  200 (287)
T 3sc6_A          195 NVMINK  200 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.98  E-value=3.6e-32  Score=238.05  Aligned_cols=227  Identities=16%  Similarity=0.162  Sum_probs=163.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc----C------CCCCCCeEEEEcCCCCh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN----L------PGASERLRIFHADLSHP   73 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~----~------~~~~~~~~~~~~Dl~~~   73 (249)
                      .+++|||||||||||++++++|+++|++|++++|+..     ..+....+.+    .      .....++.++.+|++|+
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  142 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN-----EEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  142 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS-----HHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC-----hHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence            3578999999999999999999999999999999871     0011111111    0      01124789999999998


Q ss_pred             hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccce--eeccCCCccccCCCC
Q 025660           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA--VFYNDKDVDMMDETF  151 (249)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~--~~~~~~~~~~~~e~~  151 (249)
                      +++. ...++|+||||||..... .++ +..+++|+.++.++++++.+ + .++||++||..+  +........+++|++
T Consensus       143 ~~l~-~~~~~d~Vih~A~~~~~~-~~~-~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~  217 (427)
T 4f6c_A          143 DDVV-LPENMDTIIHAGARTDHF-GDD-DEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEAD  217 (427)
T ss_dssp             CCCC-CSSCCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTC
T ss_pred             ccCC-CcCCCCEEEECCcccCCC-CCH-HHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccccccc
Confidence            8887 667899999999987542 233 47899999999999999999 5 789999999987  111122345777777


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCC-----ccHHHHHHHHcCCCcccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA-----GSVRSSLALILGNVKLKI  226 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~  226 (249)
                      +..      ...|.+.|+.||+.+|.+++.+.+ .|++++++|||+||||.......     ..+..+.+.......+..
T Consensus       218 ~~~------~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (427)
T 4f6c_A          218 VYK------GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV  290 (427)
T ss_dssp             SCS------SCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH
T ss_pred             ccc------CCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC
Confidence            632      122578999999999999999865 79999999999999998765321     123333333333444444


Q ss_pred             cccccccccchhhHHHhhhhc
Q 025660          227 CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +.++..++|++++|+|+++++
T Consensus       291 ~~~~~~~~~v~v~DvA~ai~~  311 (427)
T 4f6c_A          291 SMAEMPVDFSFVDTTARQIVA  311 (427)
T ss_dssp             HHHTCEECCEEHHHHHHHHHH
T ss_pred             ccccceEEEeeHHHHHHHHHH
Confidence            567889999999999999865

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.98  E-value=1.1e-31  Score=228.11  Aligned_cols=219  Identities=17%  Similarity=0.100  Sum_probs=165.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-------CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-------YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGF   76 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~   76 (249)
                      ++|+||||||+||||++|+++|+++|       ++|++++|+..        ....     ....+++++.+|++|++++
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~--------~~~~-----~~~~~~~~~~~Dl~d~~~~   79 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQP--------EAPA-----GFSGAVDARAADLSAPGEA   79 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCC--------CCCT-----TCCSEEEEEECCTTSTTHH
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCC--------cccc-----ccCCceeEEEcCCCCHHHH
Confidence            45789999999999999999999999       89999999861        1110     1124678899999999999


Q ss_pred             HHHHc-CCCEEEEccccCCC-CCCChHHHhhhhHHhHHHHHHHHHHhcC----CcceEEEEcccceeeccCCCccccCCC
Q 025660           77 DAAIA-GCTGVLHVATPVDF-EDKEPEEVITQRAINGTLGILKSCLKSG----TVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        77 ~~~~~-~~d~vih~a~~~~~-~~~~~~~~~~~~n~~~t~~l~~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                      .++++ ++|+|||+||.... ..+++. ..+++|+.++.++++++.+.+    .+++||++||..+|+..  ...+++|+
T Consensus        80 ~~~~~~~~d~vih~A~~~~~~~~~~~~-~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~--~~~~~~E~  156 (342)
T 2hrz_A           80 EKLVEARPDVIFHLAAIVSGEAELDFD-KGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP--LPYPIPDE  156 (342)
T ss_dssp             HHHHHTCCSEEEECCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS--CCSSBCTT
T ss_pred             HHHHhcCCCEEEECCccCcccccccHH-HHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC--CCCCcCCC
Confidence            99995 89999999997542 122343 789999999999999998764    26899999999876432  23478888


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeC-CCCCCC-CCccHHHHHHH-HcCCCccccc
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVG-PFICPK-FAGSVRSSLAL-ILGNVKLKIC  227 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g-~~~~~~-~~~~~~~~~~~-~~~~~~~~~~  227 (249)
                      ++.         .|.+.|+.||.++|.+++.+..+++++.+++|++.+|| |+.... ...++..+.+. ..+.....+.
T Consensus       157 ~~~---------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (342)
T 2hrz_A          157 FHT---------TPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPV  227 (342)
T ss_dssp             CCC---------CCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECS
T ss_pred             CCC---------CCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccC
Confidence            763         35688999999999999999887789999999999999 664321 12334344443 3343332234


Q ss_pred             ccccccccchhhHHHhhhhc
Q 025660          228 CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       228 ~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .+...++++|++|+|+++.+
T Consensus       228 ~~~~~~~~~~v~Dva~~~~~  247 (342)
T 2hrz_A          228 PESIRHWHASPRSAVGFLIH  247 (342)
T ss_dssp             CTTCEEEEECHHHHHHHHHH
T ss_pred             CCccceeeEehHHHHHHHHH
Confidence            44556678999999998754

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.98  E-value=8.1e-32  Score=221.60  Aligned_cols=189  Identities=18%  Similarity=0.162  Sum_probs=154.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      ||+||||||+||||++++++|+++|++|++++|+..        ..     .   ..+++++.+|++|++++.++++++|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~-----~---~~~~~~~~~Dl~d~~~~~~~~~~~d   65 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL--------GA-----A---EAHEEIVACDLADAQAVHDLVKDCD   65 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCC--------CC-----C---CTTEEECCCCTTCHHHHHHHHTTCS
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCc--------cc-----c---CCCccEEEccCCCHHHHHHHHcCCC
Confidence            468999999999999999999999999999999872        10     0   1257889999999999999999999


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCC
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (249)
                      +|||+|+....  .++ +..+++|+.++.++++++.+.+ +++||++||..+++... ...+++|+++.         .|
T Consensus        66 ~vi~~a~~~~~--~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~-~~~~~~E~~~~---------~~  131 (267)
T 3ay3_A           66 GIIHLGGVSVE--RPW-NDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYP-RTTRIDTEVPR---------RP  131 (267)
T ss_dssp             EEEECCSCCSC--CCH-HHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSB-TTSCBCTTSCC---------CC
T ss_pred             EEEECCcCCCC--CCH-HHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCC-CCCCCCCCCCC---------CC
Confidence            99999997632  334 4889999999999999999887 88999999998765432 23578888763         35


Q ss_pred             CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhh
Q 025660          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFA  244 (249)
Q Consensus       165 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a  244 (249)
                      .+.|+.+|..+|.+++.+...++++++++||+.+|+...                        .+...++|+|++|+|++
T Consensus       132 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~------------------------~~~~~~~~~~~~dva~~  187 (267)
T 3ay3_A          132 DSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK------------------------DARMMATWLSVDDFMRL  187 (267)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC------------------------SHHHHHHBCCHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC------------------------CCCeeeccccHHHHHHH
Confidence            688999999999999998877899999999999984210                        12235678888888887


Q ss_pred             hhc
Q 025660          245 FAF  247 (249)
Q Consensus       245 ~~~  247 (249)
                      +..
T Consensus       188 ~~~  190 (267)
T 3ay3_A          188 MKR  190 (267)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.98  E-value=1.1e-31  Score=238.20  Aligned_cols=232  Identities=19%  Similarity=0.155  Sum_probs=166.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC---CCeEEEEEcCCCCcccCCchhhhhhccCCCC-------------CCCeEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH---GYSVTTTVRSELDPEHRNSKDLSFLKNLPGA-------------SERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-------------~~~~~~~~   67 (249)
                      .+|+|||||||||||++|+++|+++   |++|++++|+..     .......+.+....             ..+++++.
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAES-----DEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA  146 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSS-----HHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCC-----cHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence            5689999999999999999999999   899999999871     11112222221111             24799999


Q ss_pred             cCCC------ChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccC
Q 025660           68 ADLS------HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        68 ~Dl~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~  141 (249)
                      +|++      +.+++.++++++|+|||+||....  .++ +..+++|+.++.+|+++|.+.+ +++|||+||..+|... 
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~-~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~-  221 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPY-HELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAI-  221 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSC-CEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTS-
T ss_pred             eECCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCH-HHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCcc-
Confidence            9998      667899999999999999998765  333 3788999999999999999988 8899999998865432 


Q ss_pred             CCccccCCCCCCchhHh--hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC---CCccHH-HHH
Q 025660          142 KDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK---FAGSVR-SSL  215 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~--~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~---~~~~~~-~~~  215 (249)
                       ...+++|+.+..+...  .......+.|+.||+.+|.+++.+..+.+++++++|||+|||+.....   ...++. .+.
T Consensus       222 -~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~  300 (478)
T 4dqv_A          222 -EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVL  300 (478)
T ss_dssp             -CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHH
T ss_pred             -CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHH
Confidence             3346777765331100  000112356999999999999999887899999999999999865222   222332 222


Q ss_pred             HHHcCCC-ccc-ccc------cccccccchhhHHHhhhh
Q 025660          216 ALILGNV-KLK-ICC------VMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       216 ~~~~~~~-~~~-~~~------~~~~~~~i~v~d~a~a~~  246 (249)
                      .....+. +.. +..      ++..++|+|++|+|+++.
T Consensus       301 ~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~  339 (478)
T 4dqv_A          301 SLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIA  339 (478)
T ss_dssp             HHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHH
T ss_pred             HHHHcCcccccccccccccccccceeeeeeHHHHHHHHH
Confidence            2222222 111 111      156789999999999985

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.98  E-value=6.5e-32  Score=225.34  Aligned_cols=194  Identities=18%  Similarity=0.063  Sum_probs=154.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--C
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--C   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~   83 (249)
                      |+||||||+||||++++++|+ +|++|++++|+.                        ..+.+|++|++++.+++++  +
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~------------------------~~~~~D~~d~~~~~~~~~~~~~   55 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS------------------------KEFCGDFSNPKGVAETVRKLRP   55 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC------------------------SSSCCCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc------------------------ccccccCCCHHHHHHHHHhcCC
Confidence            379999999999999999999 899999999876                        1257999999999999986  9


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+....  ...++. ..+++|+.++.++++++++.+ + +|||+||..+|+..  ...+++|+++.        
T Consensus        56 d~vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~--~~~~~~E~~~~--------  122 (299)
T 1n2s_A           56 DVIVNAAAHTAVDKAESEPE-LAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGT--GDIPWQETDAT--------  122 (299)
T ss_dssp             SEEEECCCCCCHHHHTTCHH-HHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCC--TTCCBCTTSCC--------
T ss_pred             CEEEECcccCCHhhhhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCC--CCCCCCCCCCC--------
Confidence            999999997653  234454 889999999999999999987 5 89999999876543  23467888763        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                       .|.+.|+.+|..+|.+++.+.    .+++++||+++|||+..    .++..+.+....+..+... +++.++|+|++|+
T Consensus       123 -~p~~~Y~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dv  192 (299)
T 1n2s_A          123 -SPLNVYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN----NFAKTMLRLAKERQTLSVI-NDQYGAPTGAELL  192 (299)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHHHCSEEEEE-CSCEECCEEHHHH
T ss_pred             -CCccHHHHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC----cHHHHHHHHHhcCCCEEee-cCcccCCeeHHHH
Confidence             367889999999999998863    48999999999999754    3444444444444433332 3578899999999


Q ss_pred             Hhhhhc
Q 025660          242 AFAFAF  247 (249)
Q Consensus       242 a~a~~~  247 (249)
                      |+++.+
T Consensus       193 a~~~~~  198 (299)
T 1n2s_A          193 ADCTAH  198 (299)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.97  E-value=1.1e-31  Score=225.56  Aligned_cols=201  Identities=16%  Similarity=0.141  Sum_probs=133.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   82 (249)
                      +|+||||||+||||++++++|+++|++|++++|+.        ..           .+  ++.+|++|++++.+++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~-----------~~--~~~~Dl~d~~~~~~~~~~~~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR--------AR-----------PK--FEQVNLLDSNAVHHIIHDFQ   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CHHHHHHHC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC--------CC-----------CC--eEEecCCCHHHHHHHHHhhC
Confidence            46899999999999999999999999999999876        11           12  678999999999999874  


Q ss_pred             CCEEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           83 CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        83 ~d~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +|+|||+||.....  ..++. ..+++|+.++.++++++.+.+ . +||++||..+|+.   ...+++|+++.       
T Consensus        61 ~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~---~~~~~~E~~~~-------  127 (315)
T 2ydy_A           61 PHVIVHCAAERRPDVVENQPD-AASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDG---TNPPYREEDIP-------  127 (315)
T ss_dssp             CSEEEECC--------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCS---SSCSBCTTSCC-------
T ss_pred             CCEEEECCcccChhhhhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCC---CCCCCCCCCCC-------
Confidence            89999999976542  23443 789999999999999999988 5 9999999987654   24567888763       


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHc-CCCcccccccccccccchhh
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL-GNVKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~  239 (249)
                        .|.+.|+.+|..+|.+++.+    +++++++||+.||||..... ..++..+.+... .+..+.. .+++.++|+|++
T Consensus       128 --~~~~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~  199 (315)
T 2ydy_A          128 --APLNLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLE-ESAVTVMFDKVQFSNKSANM-DHWQQRFPTHVK  199 (315)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGG-GSTTGGGHHHHHCCSSCEEE-ECSSBBCCEEHH
T ss_pred             --CCcCHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCccc-ccHHHHHHHHHHhcCCCeee-ccCceECcEEHH
Confidence              35688999999999999875    57889999999999987521 122223333333 3333333 357788999999


Q ss_pred             HHHhhhhc
Q 025660          240 AIAFAFAF  247 (249)
Q Consensus       240 d~a~a~~~  247 (249)
                      |+|+++.+
T Consensus       200 Dva~a~~~  207 (315)
T 2ydy_A          200 DVATVCRQ  207 (315)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.97  E-value=8.2e-31  Score=242.47  Aligned_cols=226  Identities=17%  Similarity=0.182  Sum_probs=168.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|+||||||+||||++|+++|+++|++|++++|+..    ...+....+....  ..+++++.+|++|++++.++++  
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~----~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~   83 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSN----STYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEY   83 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCc----chHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhC
Confidence            4579999999999999999999999999999999762    0011111221111  1357889999999999999998  


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC--CccccCCCCCCchhH
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK--DVDMMDETFWSDVDY  157 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~~e~~~~~~~~  157 (249)
                      ++|+|||+||....  ...++. ..+++|+.++.+++++|++.+ +++||++||..+|+....  ...+++|+.+.    
T Consensus        84 ~~D~Vih~A~~~~~~~~~~~~~-~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~----  157 (699)
T 1z45_A           84 KIDSVIHFAGLKAVGESTQIPL-RYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPL----  157 (699)
T ss_dssp             CCCEEEECCSCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC----
T ss_pred             CCCEEEECCcccCcCccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCC----
Confidence            89999999997543  112333 688999999999999999988 889999999987653321  12456676653    


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHH--cCCcEEEeecCeEeCCCCCCC--------CCccHHHHHHHHcCC-Ccc-c
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGN-VKL-K  225 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~-~~~-~  225 (249)
                           .|.+.|+.||.++|.+++.++.+  .+++++++||+++|||.....        ...++..+.+...+. ..+ .
T Consensus       158 -----~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (699)
T 1z45_A          158 -----GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYI  232 (699)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCC
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEE
Confidence                 35678999999999999998776  689999999999999864321        123455566665543 333 3


Q ss_pred             cc------ccccccccchhhHHHhhhh
Q 025660          226 IC------CVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       226 ~~------~~~~~~~~i~v~d~a~a~~  246 (249)
                      ++      ++.+.++|+|++|+|++++
T Consensus       233 ~g~~~~~~~g~~~~~~i~v~Dva~a~~  259 (699)
T 1z45_A          233 FGDDYDSRDGTPIRDYIHVVDLAKGHI  259 (699)
T ss_dssp             C------CCSSCEECEEEHHHHHHHHH
T ss_pred             eCCcccCCCCCeeEeeEEHHHHHHHHH
Confidence            33      5778899999999998864

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.97  E-value=6.8e-31  Score=241.52  Aligned_cols=225  Identities=20%  Similarity=0.231  Sum_probs=171.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh-HHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-FDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~   81 (249)
                      ++|+|||||||||||++++++|+++ |++|++++|+.        .....+..    ..+++++.+|++|+++ +.++++
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~--------~~~~~~~~----~~~v~~v~~Dl~d~~~~~~~~~~  381 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS--------DAISRFLN----HPHFHFVEGDISIHSEWIEYHVK  381 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCC--------TTTGGGTT----CTTEEEEECCTTTCHHHHHHHHH
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCc--------hhhhhhcc----CCceEEEECCCCCcHHHHHHhhc
Confidence            4578999999999999999999998 89999999987        22222211    2368899999999875 778888


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      ++|+|||+||....  ...++. ..+++|+.++.++++++.+.+  ++||++||..+|+..  ...+++|+++....  .
T Consensus       382 ~~D~Vih~Aa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~--~~~~~~E~~~~~~~--~  454 (660)
T 1z7e_A          382 KCDVVLPLVAIATPIEYTRNPL-RVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMC--SDKYFDEDHSNLIV--G  454 (660)
T ss_dssp             HCSEEEECCCCCCTHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTC--CSSSBCTTTCCEEE--C
T ss_pred             CCCEEEECceecCccccccCHH-HHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCC--CCcccCCCcccccc--C
Confidence            99999999997653  122343 788999999999999999876  799999999876543  23467777653100  0


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC------CCccHH-HHHHHHcCCCcccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVR-SSLALILGNVKLKICCVMNR  232 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~  232 (249)
                      +...|.+.|+.||..+|.+++.++.+++++++++||++||||+....      ...++. .+.....+.....++++++.
T Consensus       455 p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~  534 (660)
T 1z7e_A          455 PVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK  534 (660)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCE
T ss_pred             cccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeE
Confidence            11235678999999999999998877899999999999999986431      123333 33444455544445778889


Q ss_pred             cccchhhHHHhhhhc
Q 025660          233 SHTLFVYAIAFAFAF  247 (249)
Q Consensus       233 ~~~i~v~d~a~a~~~  247 (249)
                      ++|+|++|+|.++.+
T Consensus       535 ~~~i~v~Dva~ai~~  549 (660)
T 1z7e_A          535 RCFTDIRDGIEALYR  549 (660)
T ss_dssp             EECEEHHHHHHHHHH
T ss_pred             EEEEEHHHHHHHHHH
Confidence            999999999999764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=8.4e-32  Score=240.63  Aligned_cols=227  Identities=16%  Similarity=0.172  Sum_probs=166.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh----ccC------CCCCCCeEEEEcCCCCh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL----KNL------PGASERLRIFHADLSHP   73 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l----~~~------~~~~~~~~~~~~Dl~~~   73 (249)
                      .+++|||||||||||++|+++|+++|++|++++|+..     .......+    ...      .....+++++.+|++++
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~-----~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  223 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN-----EEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  223 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSS-----HHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCC-----hHHHHHHHHHHHHHhcccccchhccCceEEEecCCccc
Confidence            3578999999999999999999988999999999871     00011111    000      01124799999999998


Q ss_pred             hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccce--eeccCCCccccCCCC
Q 025660           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA--VFYNDKDVDMMDETF  151 (249)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~--~~~~~~~~~~~~e~~  151 (249)
                      +++. +..++|+||||||.....  ...+....+|+.++++++++|.+ + .++|||+||..+  +........+++|++
T Consensus       224 ~~l~-~~~~~D~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~  298 (508)
T 4f6l_B          224 DDVV-LPENMDTIIHAGARTDHF--GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEAD  298 (508)
T ss_dssp             SSCC-CSSCCSEEEECCCC----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTC
T ss_pred             ccCC-CccCCCEEEECCceecCC--CCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCccccccc
Confidence            8877 667899999999987542  22347889999999999999998 4 689999999987  222223455777777


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC-----CccHHHHHHHHcCCCcccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-----AGSVRSSLALILGNVKLKI  226 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~  226 (249)
                      +...      ..|.+.|+.||+.+|.+++.+.+ .|++++++||++||||......     ...+..+.+.......+..
T Consensus       299 ~~~~------~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  371 (508)
T 4f6l_B          299 VYKG------QLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV  371 (508)
T ss_dssp             SCSS------BCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET
T ss_pred             cccc------ccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC
Confidence            6321      12578999999999999999865 7999999999999999875531     1223344444444444445


Q ss_pred             cccccccccchhhHHHhhhhc
Q 025660          227 CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ..++..++|+|++|+|+++++
T Consensus       372 ~~g~~~~~~v~v~DvA~ai~~  392 (508)
T 4f6l_B          372 SMAEMPVDFSFVDTTARQIVA  392 (508)
T ss_dssp             TGGGSEEECEEHHHHHHHHHH
T ss_pred             CccCceEEEEcHHHHHHHHHH
Confidence            567889999999999999864

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.97  E-value=9.5e-32  Score=214.93  Aligned_cols=182  Identities=15%  Similarity=0.172  Sum_probs=148.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC-hhhHHHHHcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-PDGFDAAIAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d   84 (249)
                      |+||||||+|+||++++++|+++|++|++++|+.        ++...+       .+++++.+|++| ++++.++++++|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~~d   65 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV--------EQVPQY-------NNVKAVHFDVDWTPEEMAKQLHGMD   65 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG--------GGSCCC-------TTEEEEECCTTSCHHHHHTTTTTCS
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc--------cchhhc-------CCceEEEecccCCHHHHHHHHcCCC
Confidence            3799999999999999999999999999999987        222211       468999999999 999999999999


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCC
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (249)
                      +|||+||....       ..+++|+.++.++++++++.+ +++||++||..++...     +..| .+         ..|
T Consensus        66 ~vi~~ag~~~~-------~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~-----~~~e-~~---------~~~  122 (219)
T 3dqp_A           66 AIINVSGSGGK-------SLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPE-----KWIG-AG---------FDA  122 (219)
T ss_dssp             EEEECCCCTTS-------SCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGG-----GCCS-HH---------HHH
T ss_pred             EEEECCcCCCC-------CcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCC-----cccc-cc---------ccc
Confidence            99999998653       477899999999999999988 8999999997654321     2333 11         124


Q ss_pred             CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhh
Q 025660          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFA  244 (249)
Q Consensus       165 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a  244 (249)
                      .+.|+.+|..+|.+++   ..++++++++||+.+||+......                   ..++..++|++++|+|++
T Consensus       123 ~~~Y~~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~-------------------~~~~~~~~~i~~~Dva~~  180 (219)
T 3dqp_A          123 LKDYYIAKHFADLYLT---KETNLDYTIIQPGALTEEEATGLI-------------------DINDEVSASNTIGDVADT  180 (219)
T ss_dssp             THHHHHHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSEE-------------------EESSSCCCCEEHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCcc-------------------ccCCCcCCcccHHHHHHH
Confidence            5789999999999986   347999999999999998643321                   013677899999999999


Q ss_pred             hhc
Q 025660          245 FAF  247 (249)
Q Consensus       245 ~~~  247 (249)
                      +++
T Consensus       181 i~~  183 (219)
T 3dqp_A          181 IKE  183 (219)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.97  E-value=1.1e-30  Score=217.18  Aligned_cols=191  Identities=12%  Similarity=0.058  Sum_probs=152.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      .++|||||||||||++++++|+++|++|++++|+.                            +|++|++++.++++  +
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------------~Dl~d~~~~~~~~~~~~   63 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------LDITNVLAVNKFFNEKK   63 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------CCTTCHHHHHHHHHHHC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc----------------------------CCCCCHHHHHHHHHhcC
Confidence            47899999999999999999999999999998853                            79999999999998  7


Q ss_pred             CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +|+|||+||....  ...++. ..+++|+.++.++++++.+.+ . +||++||..+|+..  ...+++|+++.       
T Consensus        64 ~d~vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~--~~~~~~E~~~~-------  131 (292)
T 1vl0_A           64 PNVVINCAAHTAVDKCEEQYD-LAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGE--AKEPITEFDEV-------  131 (292)
T ss_dssp             CSEEEECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSC--CSSCBCTTSCC-------
T ss_pred             CCEEEECCccCCHHHHhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCC--CCCCCCCCCCC-------
Confidence            9999999997543  113343 789999999999999999988 6 99999999876543  23467888763       


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhH
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                        .|.+.|+.+|..+|.+++.+    +.+++++||+.+||| ..    .++..+.+....+..+.+. +++.++|+|++|
T Consensus       132 --~~~~~Y~~sK~~~E~~~~~~----~~~~~~lR~~~v~G~-~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D  199 (292)
T 1vl0_A          132 --NPQSAYGKTKLEGENFVKAL----NPKYYIVRTAWLYGD-GN----NFVKTMINLGKTHDELKVV-HDQVGTPTSTVD  199 (292)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHH----CSSEEEEEECSEESS-SS----CHHHHHHHHHHHCSEEEEE-SSCEECCEEHHH
T ss_pred             --CCccHHHHHHHHHHHHHHhh----CCCeEEEeeeeeeCC-Cc----ChHHHHHHHHhcCCcEEee-cCeeeCCccHHH
Confidence              35678999999999999885    357999999999999 32    3344444443333333232 357789999999


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      +|+++.+
T Consensus       200 va~~~~~  206 (292)
T 1vl0_A          200 LARVVLK  206 (292)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999865

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.97  E-value=1.5e-30  Score=215.90  Aligned_cols=189  Identities=17%  Similarity=0.096  Sum_probs=148.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      |+|+|||||| ||||++|+++|+++|++|++++|+.        .+...+..     .+++++.+|++|.+     ++++
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~~-----~~~~~~~~D~~d~~-----~~~~   64 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNP--------DQMEAIRA-----SGAEPLLWPGEEPS-----LDGV   64 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCG--------GGHHHHHH-----TTEEEEESSSSCCC-----CTTC
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcCh--------hhhhhHhh-----CCCeEEEecccccc-----cCCC
Confidence            4579999998 9999999999999999999999987        44444433     26899999999965     6789


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHh--cCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK--SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~--~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+|+....  .+          ..+.++++++++  .+ +++|||+||..+|+..  ...+++|+++.        
T Consensus        65 d~vi~~a~~~~~--~~----------~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~--~~~~~~E~~~~--------  121 (286)
T 3ius_A           65 THLLISTAPDSG--GD----------PVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDH--DGAWVDETTPL--------  121 (286)
T ss_dssp             CEEEECCCCBTT--BC----------HHHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCC--TTCEECTTSCC--------
T ss_pred             CEEEECCCcccc--cc----------HHHHHHHHHHHhhcCC-ceEEEEeecceecCCC--CCCCcCCCCCC--------
Confidence            999999997543  11          124688899988  55 7899999999876543  34568888764        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                       .|.+.|+.+|..+|.+++.+   .+++++++||+++|||+.... .        .+..+....+..+++.++|+|++|+
T Consensus       122 -~p~~~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~-~--------~~~~~~~~~~~~~~~~~~~i~v~Dv  188 (286)
T 3ius_A          122 -TPTAARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF-S--------KLGKGGIRRIIKPGQVFSRIHVEDI  188 (286)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS-T--------TSSSSCCCEEECTTCCBCEEEHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHH-H--------HHhcCCccccCCCCcccceEEHHHH
Confidence             36789999999999999886   589999999999999985431 1        1223444445555788999999999


Q ss_pred             Hhhhhc
Q 025660          242 AFAFAF  247 (249)
Q Consensus       242 a~a~~~  247 (249)
                      |+++.+
T Consensus       189 a~a~~~  194 (286)
T 3ius_A          189 AQVLAA  194 (286)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.97  E-value=1.9e-30  Score=209.70  Aligned_cols=187  Identities=20%  Similarity=0.185  Sum_probs=148.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCe-EEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL-RIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++|+||||||||+||++++++|+++|++|++++|+.        ++.+.+...     ++ +++.+|++  +++.+.+.+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~--------~~~~~~~~~-----~~~~~~~~Dl~--~~~~~~~~~   84 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE--------EQGPELRER-----GASDIVVANLE--EDFSHAFAS   84 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHT-----TCSEEEECCTT--SCCGGGGTT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh--------HHHHHHHhC-----CCceEEEcccH--HHHHHHHcC
Confidence            568999999999999999999999999999999987        455444332     57 89999999  778888889


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|+|||+||....  .++. ..+++|+.++.++++++++.+ +++||++||..+...         +..+          
T Consensus        85 ~D~vi~~ag~~~~--~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~---------~~~~----------  141 (236)
T 3e8x_A           85 IDAVVFAAGSGPH--TGAD-KTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDP---------DQGP----------  141 (236)
T ss_dssp             CSEEEECCCCCTT--SCHH-HHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCG---------GGSC----------
T ss_pred             CCEEEECCCCCCC--CCcc-ccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCC---------CCCh----------
Confidence            9999999997653  4454 899999999999999999988 899999999554211         1111          


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                      .+.+.|+.+|..+|.+++    .++++++++|||.++|+.....                ......+.+.+++++++|+|
T Consensus       142 ~~~~~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~----------------~~~~~~~~~~~~~i~~~Dva  201 (236)
T 3e8x_A          142 MNMRHYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGK----------------VTVSPHFSEITRSITRHDVA  201 (236)
T ss_dssp             GGGHHHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSE----------------EEEESSCSCCCCCEEHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCe----------------EEeccCCCcccCcEeHHHHH
Confidence            135689999999999886    3799999999999999864321                11123445568999999999


Q ss_pred             hhhhcc
Q 025660          243 FAFAFN  248 (249)
Q Consensus       243 ~a~~~~  248 (249)
                      +++.+.
T Consensus       202 ~~~~~~  207 (236)
T 3e8x_A          202 KVIAEL  207 (236)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998653

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=2.6e-30  Score=222.12  Aligned_cols=180  Identities=17%  Similarity=0.158  Sum_probs=154.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      |+|||||||||||++|+++|+++|+ +|++++|+                                +|++++.++++++|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------------~d~~~l~~~~~~~d   48 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------------TKEEELESALLKAD   48 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------------CCHHHHHHHHHHCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------------CCHHHHHHHhccCC
Confidence            4799999999999999999999998 77766542                                67788999999999


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcc-eEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK-RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      +|||+||....  .++. ..+++|+.++.+|++++++.+ ++ +||++||..++.                         
T Consensus        49 ~Vih~a~~~~~--~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~-------------------------   99 (369)
T 3st7_A           49 FIVHLAGVNRP--EHDK-EFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ-------------------------   99 (369)
T ss_dssp             EEEECCCSBCT--TCST-TCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS-------------------------
T ss_pred             EEEECCcCCCC--CCHH-HHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC-------------------------
Confidence            99999998654  3343 778899999999999999988 65 999999988643                         


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHh
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAF  243 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~  243 (249)
                       .+.|+.+|..+|.+++.++++++++++++||+++|||+..+....++..+......+..+.+.+++..++|+|++|+|+
T Consensus       100 -~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  178 (369)
T 3st7_A          100 -DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVA  178 (369)
T ss_dssp             -CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHH
Confidence             1469999999999999998888999999999999999887766677777777777777777778889999999999999


Q ss_pred             hhhc
Q 025660          244 AFAF  247 (249)
Q Consensus       244 a~~~  247 (249)
                      +++.
T Consensus       179 ~~~~  182 (369)
T 3st7_A          179 EIKR  182 (369)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9754

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=2.7e-30  Score=206.86  Aligned_cols=197  Identities=12%  Similarity=0.005  Sum_probs=148.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+||||||||+||++++++|+++|++|++++|+.        ++...+..     .+++++.+|++|+++  +.++++|+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~~~-----~~~~~~~~D~~d~~~--~~~~~~d~   65 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP--------QKAADRLG-----ATVATLVKEPLVLTE--ADLDSVDA   65 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHTC-----TTSEEEECCGGGCCH--HHHTTCSE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc--------cccccccC-----CCceEEecccccccH--hhcccCCE
Confidence            3699999999999999999999999999999987        45444422     368999999999988  78889999


Q ss_pred             EEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCC-ccccCCCCCCchhHhhhcCCC
Q 025660           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD-VDMMDETFWSDVDYIRKLDSW  164 (249)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~  164 (249)
                      |||+||....  .    .....|+.++++++++|++.+  ++||++||..+++..... ..+.+|+.+         +.|
T Consensus        66 vi~~ag~~~~--~----~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~---------~~~  128 (224)
T 3h2s_A           66 VVDALSVPWG--S----GRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPES---------AAS  128 (224)
T ss_dssp             EEECCCCCTT--S----SCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGG---------GGG
T ss_pred             EEECCccCCC--c----chhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCC---------Ccc
Confidence            9999998622  1    234679999999999999987  799999998766654332 223333332         224


Q ss_pred             CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhh
Q 025660          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFA  244 (249)
Q Consensus       165 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a  244 (249)
                      .+.|+.+|..+|.+ ..+....+++++++||+.+|||+....   +.       .+...+  ......++|++++|+|++
T Consensus       129 ~~~y~~sK~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~-------~~~~~~--~~~~~~~~~i~~~DvA~~  195 (224)
T 3h2s_A          129 QPWYDGALYQYYEY-QFLQMNANVNWIGISPSEAFPSGPATS---YV-------AGKDTL--LVGEDGQSHITTGNMALA  195 (224)
T ss_dssp             STTHHHHHHHHHHH-HHHTTCTTSCEEEEEECSBCCCCCCCC---EE-------EESSBC--CCCTTSCCBCCHHHHHHH
T ss_pred             chhhHHHHHHHHHH-HHHHhcCCCcEEEEcCccccCCCcccC---ce-------eccccc--ccCCCCCceEeHHHHHHH
Confidence            67899999999954 455545799999999999999954321   10       122222  224456799999999999


Q ss_pred             hhc
Q 025660          245 FAF  247 (249)
Q Consensus       245 ~~~  247 (249)
                      +++
T Consensus       196 ~~~  198 (224)
T 3h2s_A          196 ILD  198 (224)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.97  E-value=1.6e-29  Score=216.31  Aligned_cols=212  Identities=17%  Similarity=0.072  Sum_probs=159.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-----CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-----YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      +|+|||||||||||++++++|+++|     ++|++++|+..        ... +     ...+++++.+|++|++++.++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~--------~~~-~-----~~~~~~~~~~Dl~d~~~~~~~   66 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTR--------PAW-H-----EDNPINYVQCDISDPDDSQAK   66 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCC--------CSC-C-----CSSCCEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCC--------ccc-c-----ccCceEEEEeecCCHHHHHHH
Confidence            3689999999999999999999999     99999999872        111 1     123678999999999999999


Q ss_pred             HcC---CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEE-------EEcccceeeccCCCcccc
Q 025660           80 IAG---CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVV-------YTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        80 ~~~---~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v-------~~SS~~~~~~~~~~~~~~  147 (249)
                      +++   +|+|||+|+...   .++. ..+++|+.++.+++++|++.  + +++||       |+||..+|+.......++
T Consensus        67 ~~~~~~~d~vih~a~~~~---~~~~-~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~  141 (364)
T 2v6g_A           67 LSPLTDVTHVFYVTWANR---STEQ-ENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPY  141 (364)
T ss_dssp             HTTCTTCCEEEECCCCCC---SSHH-HHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSB
T ss_pred             HhcCCCCCEEEECCCCCc---chHH-HHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCC
Confidence            998   999999999753   3444 78999999999999999987  5 78997       799988765432234577


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcC-CcEEEeecCeEeCCCCCCCCCccHHH-HHHHH---cCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG-LDLVTLIPSMVVGPFICPKFAGSVRS-SLALI---LGNV  222 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~vrp~~v~g~~~~~~~~~~~~~-~~~~~---~~~~  222 (249)
                      +|++|..+        +.+.|    ..+|.++..+.+.++ ++++++||+.||||+.......+... +.+.+   .+..
T Consensus       142 ~E~~~~~~--------~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~  209 (364)
T 2v6g_A          142 TEDLPRLK--------YMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKV  209 (364)
T ss_dssp             CTTSCCCS--------SCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCC
T ss_pred             CccccCCc--------cchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCc
Confidence            88876431        24567    357888888876666 99999999999999875432322322 33433   3443


Q ss_pred             ccccccc---ccccccchhhHHHhhhhc
Q 025660          223 KLKICCV---MNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~---~~~~~~i~v~d~a~a~~~  247 (249)
                      ...++++   .+..++++++|+|++++.
T Consensus       210 ~~~~g~~~~~~~~~~~~~v~Dva~a~~~  237 (364)
T 2v6g_A          210 LRFTGCKAAWDGYSDCSDADLIAEHHIW  237 (364)
T ss_dssp             BCCCSCHHHHHSCBCCEEHHHHHHHHHH
T ss_pred             eecCCCcccccccCCCCcHHHHHHHHHH
Confidence            3335555   345678888999998753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=1.1e-29  Score=205.64  Aligned_cols=193  Identities=15%  Similarity=0.082  Sum_probs=147.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+||||||+|+||++++++|+++|+  +|++++|++        ++...+.     ..++.++.+|++|++++.++++
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~--------~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~   83 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRK--------LTFDEEA-----YKNVNQEVVDFEKLDDYASAFQ   83 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSC--------CCCCSGG-----GGGCEEEECCGGGGGGGGGGGS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCC--------CCccccc-----cCCceEEecCcCCHHHHHHHhc
Confidence            357899999999999999999999999  999999987        2222111     1257889999999999999999


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      ++|+||||||.....  ...+..+++|+.++.++++++++.+ .++||++||..++..                      
T Consensus        84 ~~d~vi~~ag~~~~~--~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~----------------------  138 (242)
T 2bka_A           84 GHDVGFCCLGTTRGK--AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS----------------------  138 (242)
T ss_dssp             SCSEEEECCCCCHHH--HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------------
T ss_pred             CCCEEEECCCccccc--CCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC----------------------
Confidence            999999999975331  1234788999999999999999887 789999999876421                      


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCC-cEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGL-DLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                        +.+.|+.+|...|.+++.    .++ +++++|||.++||+....   ....+........+..+.    ...+++++|
T Consensus       139 --~~~~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~d  205 (242)
T 2bka_A          139 --SNFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSLPDSWA----SGHSVPVVT  205 (242)
T ss_dssp             --CSSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSCCTTGG----GGTEEEHHH
T ss_pred             --CcchHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCCc---HHHHHHHHhhcccCcccc----CCcccCHHH
Confidence              135799999999998866    478 699999999999975331   222333333232222121    235899999


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      +|+++++
T Consensus       206 va~~~~~  212 (242)
T 2bka_A          206 VVRAMLN  212 (242)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.96  E-value=1.5e-30  Score=206.99  Aligned_cols=188  Identities=20%  Similarity=0.129  Sum_probs=144.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |+.++|+||||||+|+||++++++|+++|+  +|++++|++.        .         ...+++++.+|++|++++.+
T Consensus         1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~--------~---------~~~~~~~~~~D~~~~~~~~~   63 (215)
T 2a35_A            1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL--------A---------EHPRLDNPVGPLAELLPQLD   63 (215)
T ss_dssp             ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC--------C---------CCTTEECCBSCHHHHGGGCC
T ss_pred             CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCc--------c---------cCCCceEEeccccCHHHHHH
Confidence            655678999999999999999999999998  9999999872        1         12367888999999998887


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                      ++  +|+|||+|+.......++. .++++|+.++.++++++++.+ .++||++||..++..                   
T Consensus        64 ~~--~d~vi~~a~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~-------------------  120 (215)
T 2a35_A           64 GS--IDTAFCCLGTTIKEAGSEE-AFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK-------------------  120 (215)
T ss_dssp             SC--CSEEEECCCCCHHHHSSHH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT-------------------
T ss_pred             hh--hcEEEECeeeccccCCCHH-HHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC-------------------
Confidence            77  9999999997543223443 888999999999999999988 889999999876421                   


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCc-EEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccch
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLD-LVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLF  237 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~-~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (249)
                           |.+.|+.+|..+|.+++.    .+++ ++++||+.+|||.....   +...+    . .....+..  ..++|+|
T Consensus       121 -----~~~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~---~~~~~----~-~~~~~~~~--~~~~~i~  181 (215)
T 2a35_A          121 -----SSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR---LAEIL----A-APIARILP--GKYHGIE  181 (215)
T ss_dssp             -----CSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE---GGGGT----T-CCCC------CHHHHHH
T ss_pred             -----CccHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch---HHHHH----H-HhhhhccC--CCcCcEe
Confidence                 245799999999999876    4899 99999999999976421   11111    1 11122222  3679999


Q ss_pred             hhHHHhhhhc
Q 025660          238 VYAIAFAFAF  247 (249)
Q Consensus       238 v~d~a~a~~~  247 (249)
                      ++|+|+++..
T Consensus       182 ~~Dva~~~~~  191 (215)
T 2a35_A          182 ACDLARALWR  191 (215)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999854

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=1.5e-29  Score=201.81  Aligned_cols=195  Identities=12%  Similarity=0.105  Sum_probs=133.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+||||||||+||++++++|+++|++|++++|++        ++...+.      .+++++.+|++|+++  +.+.++|+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~~------~~~~~~~~D~~d~~~--~~~~~~d~   64 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA--------GKITQTH------KDINILQKDIFDLTL--SDLSDQNV   64 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS--------HHHHHHC------SSSEEEECCGGGCCH--HHHTTCSE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc--------hhhhhcc------CCCeEEeccccChhh--hhhcCCCE
Confidence            3799999999999999999999999999999998        5554443      367899999999988  77889999


Q ss_pred             EEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCC
Q 025660           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (249)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (249)
                      |||+||....        ....|+.+++++++++++.+ .+++|++||..+++..... .+..|+.+         ..|.
T Consensus        65 vi~~ag~~~~--------~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~-~~~~~~~~---------~~~~  125 (221)
T 3ew7_A           65 VVDAYGISPD--------EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDG-NTLLESKG---------LREA  125 (221)
T ss_dssp             EEECCCSSTT--------TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-----------------------------C
T ss_pred             EEECCcCCcc--------ccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCC-ccccccCC---------CCCH
Confidence            9999998432        24578999999999999987 7899999999877654432 23344433         2245


Q ss_pred             chHHHHHHHHHHHHHHHHH-HcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhh
Q 025660          166 KSYAISKTLTERAALEFAE-EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFA  244 (249)
Q Consensus       166 ~~Y~~sK~~~e~~~~~~~~-~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a  244 (249)
                      +.|+.+|...|.+ ..+.. .++++++++||+.+|||+....  .    +   ..+...+.+.  .....+++++|+|++
T Consensus       126 ~~y~~~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~--~----~---~~~~~~~~~~--~~~~~~i~~~Dva~~  193 (221)
T 3ew7_A          126 PYYPTARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTG--D----Y---QIGKDHLLFG--SDGNSFISMEDYAIA  193 (221)
T ss_dssp             CCSCCHHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC--------------------------------CCCHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HHHHhhccCccEEEEeCcceecCCCccC--c----e---Eeccccceec--CCCCceEeHHHHHHH
Confidence            6799999999987 34443 5799999999999999943211  1    1   1112222111  112369999999999


Q ss_pred             hhc
Q 025660          245 FAF  247 (249)
Q Consensus       245 ~~~  247 (249)
                      ++.
T Consensus       194 ~~~  196 (221)
T 3ew7_A          194 VLD  196 (221)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            854

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.96  E-value=8.4e-29  Score=205.14  Aligned_cols=212  Identities=17%  Similarity=0.105  Sum_probs=149.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+.++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+....  +.++.++.+|++|++++.+++
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~   70 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT--------EALDDLVAAY--PDRAEAISLDVTDGERIDVVA   70 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGGHHHHHHC--TTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhc--cCCceEEEeeCCCHHHHHHHH
Confidence            666788999999999999999999999999999999987        4444432211  246899999999999998888


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhH----HHHHHHHHHhcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAING----TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~----t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||....     ...+.++..+++|+.+    ++.+++.+++.+ .++||++||..++.+.    
T Consensus        71 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----  145 (281)
T 3m1a_A           71 ADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSF----  145 (281)
T ss_dssp             HHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC----
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCC----
Confidence            6       68999999997533     1122334789999999    555566666666 6899999998764332    


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCC---ccHHHHHHHH
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA---GSVRSSLALI  218 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~---~~~~~~~~~~  218 (249)
                                        .+.+.|+.||.+.|.+.+.++.+   +|+++++++||.+++|.......   .....+....
T Consensus       146 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  207 (281)
T 3m1a_A          146 ------------------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKV  207 (281)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHH
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHh
Confidence                              12568999999999999998887   68999999999999987543211   1110111111


Q ss_pred             cCCCcccccccccccccchhhHHHhhhhc
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ..  ...+........+.+++|+|+++.|
T Consensus       208 ~~--~~~~~~~~~~~~~~~~~dva~a~~~  234 (281)
T 3m1a_A          208 GP--TRQLVQGSDGSQPGDPAKAAAAIRL  234 (281)
T ss_dssp             HH--HHHHHHC-----CBCHHHHHHHHHH
T ss_pred             HH--HHHHHhhccCCCCCCHHHHHHHHHH
Confidence            00  0112233455678889999999865

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.96  E-value=2.4e-29  Score=225.12  Aligned_cols=202  Identities=15%  Similarity=0.052  Sum_probs=153.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +|+|||||||||||++|+++|+++|++|++++|+..        ..             ..+.+|+.+.  +.++++++|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~--------~~-------------~~v~~d~~~~--~~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP--------KP-------------GKRFWDPLNP--ASDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC--------CT-------------TCEECCTTSC--CTTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC--------Cc-------------cceeecccch--hHHhcCCCC
Confidence            679999999999999999999999999999999871        11             1256777653  355667899


Q ss_pred             EEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHH-HHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           85 GVLHVATPVDF--EDKEPEEVITQRAINGTLGILKS-CLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        85 ~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~-~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      +|||||+....  ...+..+.++++|+.++.+|+++ +++.+ +++||++||..+|+.. ....+++|+++.        
T Consensus       204 ~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~-~~~~~~~E~~~~--------  273 (516)
T 3oh8_A          204 VLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHD-RGDEILTEESES--------  273 (516)
T ss_dssp             EEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSE-EEEEEECTTSCC--------
T ss_pred             EEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCC-CCCCccCCCCCC--------
Confidence            99999997533  12223347899999999999999 45555 8899999999876522 234577888763        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                        |.+.|+.+|...|.++..+. ..|++++++||++||||+.     +++..+......+....++++++.++|+|++|+
T Consensus       274 --~~~~y~~~~~~~E~~~~~~~-~~gi~~~ilRp~~v~Gp~~-----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dv  345 (516)
T 3oh8_A          274 --GDDFLAEVCRDWEHATAPAS-DAGKRVAFIRTGVALSGRG-----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDL  345 (516)
T ss_dssp             --CSSHHHHHHHHHHHTTHHHH-HTTCEEEEEEECEEEBTTB-----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHH
T ss_pred             --CcChHHHHHHHHHHHHHHHH-hCCCCEEEEEeeEEECCCC-----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHH
Confidence              35679999999998876554 4799999999999999973     344455555555545566888999999999999


Q ss_pred             Hhhhhc
Q 025660          242 AFAFAF  247 (249)
Q Consensus       242 a~a~~~  247 (249)
                      |+++.+
T Consensus       346 a~ai~~  351 (516)
T 3oh8_A          346 TDIYYR  351 (516)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.96  E-value=1.6e-28  Score=202.16  Aligned_cols=190  Identities=16%  Similarity=0.052  Sum_probs=147.6

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--CC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--CT   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d   84 (249)
                      +||||||+||||++++++|+ +|++|++++|+..        .    .      .+   +.+|++|++++.+++++  +|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------~----~------~~---~~~Dl~~~~~~~~~~~~~~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSE--------I----Q------GG---YKLDLTDFPRLEDFIIKKRPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSC--------C----T------TC---EECCTTSHHHHHHHHHHHCCS
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCc--------C----C------CC---ceeccCCHHHHHHHHHhcCCC
Confidence            79999999999999999999 4899999999871        1    0      12   78999999999999985  99


Q ss_pred             EEEEccccCCCC--CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           85 GVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        85 ~vih~a~~~~~~--~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|||+||.....  .+++. ..+++|+.++.++++++.+.+ . +||++||..+|.+..   .+++|+++.         
T Consensus        60 ~vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~---~~~~e~~~~---------  124 (273)
T 2ggs_A           60 VIINAAAMTDVDKCEIEKE-KAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEK---GNYKEEDIP---------  124 (273)
T ss_dssp             EEEECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSS---CSBCTTSCC---------
T ss_pred             EEEECCcccChhhhhhCHH-HHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCC---CCcCCCCCC---------
Confidence            999999975431  12343 789999999999999999887 4 999999998765432   267777753         


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                      .|.+.|+.+|..+|.+++.      ++++++||+.+||+      ..+...+......+..+... ++ .++|+|++|+|
T Consensus       125 ~~~~~Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~------~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~dva  190 (273)
T 2ggs_A          125 NPINYYGLSKLLGETFALQ------DDSLIIRTSGIFRN------KGFPIYVYKTLKEGKTVFAF-KG-YYSPISARKLA  190 (273)
T ss_dssp             CCSSHHHHHHHHHHHHHCC------TTCEEEEECCCBSS------SSHHHHHHHHHHTTCCEEEE-SC-EECCCBHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhC------CCeEEEeccccccc------cHHHHHHHHHHHcCCCEEee-cC-CCCceEHHHHH
Confidence            3567899999999999866      57899999999982      12333444444444433332 22 78999999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      +++.+
T Consensus       191 ~~i~~  195 (273)
T 2ggs_A          191 SAILE  195 (273)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99865

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.96  E-value=9.2e-29  Score=206.44  Aligned_cols=198  Identities=19%  Similarity=0.064  Sum_probs=144.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |||||||||||||++|+++|+++||+|++++|++.        .           ..   +..|    +...+.++++|.
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~--------~-----------~~---~~~~----~~~~~~l~~~d~   54 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG--------P-----------GR---ITWD----ELAASGLPSCDA   54 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--------T-----------TE---EEHH----HHHHHCCCSCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC--------c-----------Ce---eecc----hhhHhhccCCCE
Confidence            47999999999999999999999999999999871        0           01   1122    223344678999


Q ss_pred             EEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           86 VLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        86 vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      |||+|+..-.     ......+.++..|+.+|++|++++...+ ...+||+.||..+|+.  ....+.+|++|..     
T Consensus        55 vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~--~~~~~~~E~~p~~-----  127 (298)
T 4b4o_A           55 AVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQP--SLTAEYDEDSPGG-----  127 (298)
T ss_dssp             EEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCC--CSSCCBCTTCCCS-----
T ss_pred             EEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecC--CCCCcccccCCcc-----
Confidence            9999985322     1122234678899999999999998765 2456899999886543  3345778887643     


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhh
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  239 (249)
                          |.+.|+..|...|....  ....+++++++||+.||||+.     +.+..+......+....++++++.++|||++
T Consensus       128 ----~~~~~~~~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~-----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~  196 (298)
T 4b4o_A          128 ----DFDFFSNLVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGG-----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIG  196 (298)
T ss_dssp             ----CSSHHHHHHHHHHHHHC--CSSSSSEEEEEEECEEECTTS-----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHH
T ss_pred             ----ccchhHHHHHHHHHHHH--hhccCCceeeeeeeeEEcCCC-----CchhHHHHHHhcCCcceecccCceeecCcHH
Confidence                45567777776665432  233589999999999999964     2344555555566666779999999999999


Q ss_pred             HHHhhhhc
Q 025660          240 AIAFAFAF  247 (249)
Q Consensus       240 d~a~a~~~  247 (249)
                      |+|+++.+
T Consensus       197 Dva~a~~~  204 (298)
T 4b4o_A          197 DLAGILTH  204 (298)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999854

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.96  E-value=1.5e-28  Score=203.77  Aligned_cols=182  Identities=21%  Similarity=0.231  Sum_probs=143.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      |+|||||||||||++++++|+++  |++|++++|+.        ++...+..     .+++++.+|++|++++.++++++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~--------~~~~~l~~-----~~~~~~~~D~~d~~~l~~~~~~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNV--------EKASTLAD-----QGVEVRHGDYNQPESLQKAFAGV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCT--------TTTHHHHH-----TTCEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCH--------HHHhHHhh-----cCCeEEEeccCCHHHHHHHHhcC
Confidence            47999999999999999999999  99999999987        33333322     25789999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+|||+|+.. .  .    .  ++|+.++.++++++++.+ +++||++||..++ .  .                     
T Consensus        68 d~vi~~a~~~-~--~----~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~--~---------------------  113 (287)
T 2jl1_A           68 SKLLFISGPH-Y--D----N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAE-E--S---------------------  113 (287)
T ss_dssp             SEEEECCCCC-S--C----H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGG-G--C---------------------
T ss_pred             CEEEEcCCCC-c--C----c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-C--C---------------------
Confidence            9999999962 1  1    1  579999999999999988 8999999998753 1  0                     


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHh
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAF  243 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~  243 (249)
                       ...|+.+|..+|.+++.    ++++++++||+.++|+...    .+   +...+..+.. .+..++..++|+|++|+|+
T Consensus       114 -~~~y~~~K~~~E~~~~~----~~~~~~ilrp~~~~~~~~~----~~---~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~  180 (287)
T 2jl1_A          114 -IIPLAHVHLATEYAIRT----TNIPYTFLRNALYTDFFVN----EG---LRASTESGAI-VTNAGSGIVNSVTRNELAL  180 (287)
T ss_dssp             -CSTHHHHHHHHHHHHHH----TTCCEEEEEECCBHHHHSS----GG---GHHHHHHTEE-EESCTTCCBCCBCHHHHHH
T ss_pred             -CCchHHHHHHHHHHHHH----cCCCeEEEECCEeccccch----hh---HHHHhhCCce-eccCCCCccCccCHHHHHH
Confidence             12599999999998864    6899999999998886421    12   2222222332 2455678899999999999


Q ss_pred             hhhc
Q 025660          244 AFAF  247 (249)
Q Consensus       244 a~~~  247 (249)
                      ++++
T Consensus       181 ~~~~  184 (287)
T 2jl1_A          181 AAAT  184 (287)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8754

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=1.5e-28  Score=201.42  Aligned_cols=208  Identities=15%  Similarity=0.065  Sum_probs=154.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+....  ..++.++.+|++|++++.++++  
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~   76 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDI--------ERARQAAAEI--GPAAYAVQMDVTRQDSIDAAIAAT   76 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--CCCceEEEeeCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987        4444332211  2367899999999999988887  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++++++.+.    +..++||++||..++.+.+      
T Consensus        77 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  150 (259)
T 4e6p_A           77 VEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA------  150 (259)
T ss_dssp             HHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC------
Confidence                 78999999997543     122333588999999999998887543    2246999999987654321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC--CC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG--NV  222 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~--~~  222 (249)
                                      +...|+.||.+.+.+.+.++.+.   ++++++|+||.|++|.....    ...+......  ..
T Consensus       151 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~  210 (259)
T 4e6p_A          151 ----------------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV----DALFARYENRPRGE  210 (259)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----HHHHHHHHTCCTTH
T ss_pred             ----------------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----hhhhhhhccCChHH
Confidence                            24579999999999999888764   89999999999999864321    1111111111  11


Q ss_pred             -cccccccccccccchhhHHHhhhhc
Q 025660          223 -KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 -~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ...+....+.+.|.+.+|+|.++.|
T Consensus       211 ~~~~~~~~~p~~r~~~~~dva~~v~~  236 (259)
T 4e6p_A          211 KKRLVGEAVPFGRMGTAEDLTGMAIF  236 (259)
T ss_dssp             HHHHHHHHSTTSSCBCTHHHHHHHHH
T ss_pred             HHHHHhccCCCCCCcCHHHHHHHHHH
Confidence             1223556677889999999999876

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.95  E-value=2e-27  Score=194.79  Aligned_cols=193  Identities=16%  Similarity=0.131  Sum_probs=148.0

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+..        ..        ...++.++.+|++|++++.++++ 
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--------~~--------~~~~~~~~~~Dv~d~~~v~~~~~~   89 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK--------PS--------ADPDIHTVAGDISKPETADRIVRE   89 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCC--------CC--------SSTTEEEEESCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh--------hc--------ccCceEEEEccCCCHHHHHHHHHH
Confidence            35688999999999999999999999999999999871        11        11268899999999999988887 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.....    
T Consensus        90 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~----  164 (260)
T 3un1_A           90 GIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVG----  164 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTT----
T ss_pred             HHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCC----
Confidence                  68999999997643     1223335889999999999988773    445 689999999765322111    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                      .+...|+.||.+.+.+.+.++.+.   |+++++|+||.|++|.....       .....     
T Consensus       165 ----------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-------~~~~~-----  216 (260)
T 3un1_A          165 ----------------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE-------THSTL-----  216 (260)
T ss_dssp             ----------------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-------GHHHH-----
T ss_pred             ----------------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-------HHHHH-----
Confidence                            134679999999999999998886   89999999999999975431       11111     


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         ........+...+|+|.++.|
T Consensus       217 ---~~~~p~~r~~~~~dva~av~~  237 (260)
T 3un1_A          217 ---AGLHPVGRMGEIRDVVDAVLY  237 (260)
T ss_dssp             ---HTTSTTSSCBCHHHHHHHHHH
T ss_pred             ---hccCCCCCCcCHHHHHHHHHH
Confidence               122344567789999998875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=4.4e-27  Score=194.24  Aligned_cols=206  Identities=14%  Similarity=0.164  Sum_probs=150.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++.. ..++.++.+|++|++++.++++ 
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD--------DHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCh--------hHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999976        333322 12211 2368899999999999988886 


Q ss_pred             ------CCCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                            ++|+||||||....       ...+.++..+++|+.++.++++++.+.    + .++||++||..++.+.+   
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---  161 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE---  161 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT---
T ss_pred             HHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCC---
Confidence                  68999999997532       111233478999999999999888653    4 57999999987654321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                        .+...|+.||.+.|.+++.++.+   +|++++++|||.++|+................... 
T Consensus       162 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-  222 (278)
T 2bgk_A          162 ------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQ-  222 (278)
T ss_dssp             ------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHH-
T ss_pred             ------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhc-
Confidence                              02457999999999999988775   58999999999999997654322111111111111 


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            .......+++.+|+|.++.|
T Consensus       223 ------~~~~~~~~~~~~dva~~~~~  242 (278)
T 2bgk_A          223 ------AANLKGTLLRAEDVADAVAY  242 (278)
T ss_dssp             ------TCSSCSCCCCHHHHHHHHHH
T ss_pred             ------ccccccccCCHHHHHHHHHH
Confidence                  11123568899999998765

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.95  E-value=3.5e-27  Score=186.06  Aligned_cols=185  Identities=17%  Similarity=0.163  Sum_probs=139.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+||||||+|+||++++++|+++|++|++++|++        ++...+.     ..+++++.+|++|++++.++++++|+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~--------~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~   70 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS--------SRLPSEG-----PRPAHVVVGDVLQAADVDKTVAGQDA   70 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG--------GGSCSSS-----CCCSEEEESCTTSHHHHHHHHTTCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh--------hhccccc-----CCceEEEEecCCCHHHHHHHHcCCCE
Confidence            6899999999999999999999999999999987        2222111     23688999999999999999999999


Q ss_pred             EEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCC
Q 025660           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (249)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (249)
                      |||+|+....  .++    .++|+.++.++++++++.+ .++||++||..++......        +          .+.
T Consensus        71 vi~~a~~~~~--~~~----~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~--------~----------~~~  125 (206)
T 1hdo_A           71 VIVLLGTRND--LSP----TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKV--------P----------PRL  125 (206)
T ss_dssp             EEECCCCTTC--CSC----CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCS--------C----------GGG
T ss_pred             EEECccCCCC--CCc----cchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCcccc--------c----------ccc
Confidence            9999997543  122    3588999999999999988 8899999998765322110        0          024


Q ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhhh
Q 025660          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAF  245 (249)
Q Consensus       166 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~  245 (249)
                      +.|+.+|...|.+++.    ++++++++||+.+. +.....  .+..            .+.. ....+|++++|+|+++
T Consensus       126 ~~y~~~K~~~e~~~~~----~~i~~~~lrp~~~~-~~~~~~--~~~~------------~~~~-~~~~~~i~~~Dva~~~  185 (206)
T 1hdo_A          126 QAVTDDHIRMHKVLRE----SGLKYVAVMPPHIG-DQPLTG--AYTV------------TLDG-RGPSRVISKHDLGHFM  185 (206)
T ss_dssp             HHHHHHHHHHHHHHHH----TCSEEEEECCSEEE-CCCCCS--CCEE------------ESSS-CSSCSEEEHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHh----CCCCEEEEeCCccc-CCCCCc--ceEe------------cccC-CCCCCccCHHHHHHHH
Confidence            6799999999998843    68999999999983 322111  1000            0000 0015899999999998


Q ss_pred             hcc
Q 025660          246 AFN  248 (249)
Q Consensus       246 ~~~  248 (249)
                      ++-
T Consensus       186 ~~~  188 (206)
T 1hdo_A          186 LRC  188 (206)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            653

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-27  Score=194.17  Aligned_cols=201  Identities=17%  Similarity=0.075  Sum_probs=148.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+....   .+.+++.+|++|++++.++++  
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   74 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN--------SDLVSLAKEC---PGIEPVCVDLGDWDATEKALGGI   74 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhc---cCCCcEEecCCCHHHHHHHHHHc
Confidence            457999999999999999999999999999999986        4443332211   245778999999999999987  


Q ss_pred             -CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 -GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 -~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                       ++|+|||+||....     ...+.++..+++|+.++.++++++.+.    +..++||++||..++.+.+          
T Consensus        75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  144 (244)
T 1cyd_A           75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------  144 (244)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC----------
Confidence             47999999997543     112233478999999999988887653    2147999999987643321          


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICC  228 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (249)
                                  +...|+.||...|.+++.++.+   .+++++++|||.++|+........  ..+...+        ..
T Consensus       145 ------------~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~--------~~  202 (244)
T 1cyd_A          145 ------------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD--PEFARKL--------KE  202 (244)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC--HHHHHHH--------HH
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC--HHHHHHH--------Hh
Confidence                        2457999999999999998876   489999999999999864311100  1111111        11


Q ss_pred             cccccccchhhHHHhhhhc
Q 025660          229 VMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       229 ~~~~~~~i~v~d~a~a~~~  247 (249)
                      ....++|++++|+|.++.|
T Consensus       203 ~~~~~~~~~~~dva~~~~~  221 (244)
T 1cyd_A          203 RHPLRKFAEVEDVVNSILF  221 (244)
T ss_dssp             HSTTSSCBCHHHHHHHHHH
T ss_pred             cCCccCCCCHHHHHHHHHH
Confidence            2344789999999999865

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.4e-27  Score=197.84  Aligned_cols=212  Identities=16%  Similarity=0.170  Sum_probs=146.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       +..+.+ .++.. .+.++.++.+|++|++++.++++
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   96 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAP-------DEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMA   96 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCH-------HHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCh-------HHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999999541       222222 11111 13478899999999999988876


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|+||||||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+    
T Consensus        97 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----  171 (281)
T 3v2h_A           97 MVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASP----  171 (281)
T ss_dssp             HHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----
T ss_pred             HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCC----
Confidence                   689999999986441     223335889999999999988873    445 57999999987654321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.+|......+....  .......+
T Consensus       172 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~  231 (281)
T 3v2h_A          172 ------------------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQAR--TRGITEEQ  231 (281)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhh--hcCCCHHH
Confidence                              14579999999999999887764   89999999999999875432211100  00000011


Q ss_pred             c--ccccccccccccchhhHHHhhhhc
Q 025660          223 K--LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~--~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .  -.+........+.+.+|+|.+++|
T Consensus       232 ~~~~~~~~~~p~~r~~~~edvA~~v~~  258 (281)
T 3v2h_A          232 VINEVMLKGQPTKKFITVEQVASLALY  258 (281)
T ss_dssp             --------CCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence            1  113455667789999999999876

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.95  E-value=1.2e-27  Score=194.52  Aligned_cols=202  Identities=15%  Similarity=0.143  Sum_probs=149.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       +..+.+ +++...+.++.++.+|++|++++.++++ 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   75 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSK-------EKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKE   75 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            5679999999999999999999999999999888651       222222 2222234578899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|++|||||....     ...+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.+     
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  149 (246)
T 3osu_A           76 VVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNP-----  149 (246)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC-----
Confidence                  68999999997643     122333478999999999999988    4445 67999999987654432     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+   +|+++++++||.+.++......+    ...+....   
T Consensus       150 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~~~~~~~---  205 (246)
T 3osu_A          150 -----------------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD----ELKEQMLT---  205 (246)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH----HHHHHHHT---
T ss_pred             -----------------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH----HHHHHHHh---
Confidence                             2457999999999998888774   48999999999999987643221    22222222   


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           ......+...+|+|.++.|
T Consensus       206 -----~~p~~r~~~~~dva~~v~~  224 (246)
T 3osu_A          206 -----QIPLARFGQDTDIANTVAF  224 (246)
T ss_dssp             -----TCTTCSCBCHHHHHHHHHH
T ss_pred             -----cCCCCCCcCHHHHHHHHHH
Confidence                 2233456777888888765

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=1.4e-27  Score=194.72  Aligned_cols=202  Identities=13%  Similarity=0.036  Sum_probs=148.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   81 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA--------DAANHVVDEIQQLGGQAFACRCDITSEQELSALADF   81 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH
Confidence            457999999999999999999999999999999986        333322 2221223468899999999999988886 


Q ss_pred             ------CCCEEEEccccCCCC----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 ------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                            ++|+||||||.....    ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.       
T Consensus        82 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------  153 (255)
T 1fmc_A           82 AISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN-------  153 (255)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC-------
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC-------
Confidence                  799999999975431    112234789999999999888875    345 6899999998764322       


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                     .+.+.|+.||.+.|.+++.++.+.   +++++++|||.++++........  ........+    
T Consensus       154 ---------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~----  212 (255)
T 1fmc_A          154 ---------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP--EIEQKMLQH----  212 (255)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH--HHHHHHHHT----
T ss_pred             ---------------CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccCh--HHHHHHHhc----
Confidence                           124679999999999999887664   89999999999999864322111  111122111    


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           .....|.+.+|+|.++.|
T Consensus       213 -----~~~~~~~~~~dva~~~~~  230 (255)
T 1fmc_A          213 -----TPIRRLGQPQDIANAALF  230 (255)
T ss_dssp             -----CSSCSCBCHHHHHHHHHH
T ss_pred             -----CCcccCCCHHHHHHHHHH
Confidence                 223457889999998765

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.95  E-value=3.2e-27  Score=191.88  Aligned_cols=196  Identities=15%  Similarity=0.138  Sum_probs=143.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+||||||+|+||++++++|+++  |++|++++|++        ++.+.+      ..+++++.+|++|++++.++++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~--------~~~~~~------~~~~~~~~~D~~d~~~~~~~~~   68 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA--------QGKEKI------GGEADVFIGDITDADSINPAFQ   68 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCH--------HHHHHT------TCCTTEEECCTTSHHHHHHHHT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCC--------Cchhhc------CCCeeEEEecCCCHHHHHHHHc
Confidence            5679999999999999999999999  89999999986        443333      1356789999999999999999


Q ss_pred             CCCEEEEccccCCCC--------CCCh------HHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 GCTGVLHVATPVDFE--------DKEP------EEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 ~~d~vih~a~~~~~~--------~~~~------~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                      ++|+|||+||.....        ..++      .+..+++|+.++.++++++++.+ .++||++||..++..        
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~--------  139 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNP--------  139 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCT--------
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCC--------
Confidence            999999999975320        0011      11457899999999999999988 889999999875311        


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKIC  227 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (249)
                        ..+.. .+      ..+.|+.+|..+|.+++.    ++++++++|||.+||+.....  ...       .+... .+.
T Consensus       140 --~~~~~-~~------~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~--~~~-------~~~~~-~~~  196 (253)
T 1xq6_A          140 --DHPLN-KL------GNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVR--ELL-------VGKDD-ELL  196 (253)
T ss_dssp             --TCGGG-GG------GGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSS--CEE-------EESTT-GGG
T ss_pred             --CCccc-cc------cchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchh--hhh-------ccCCc-CCc
Confidence              11100 00      013588899999998764    689999999999999974321  110       11111 111


Q ss_pred             ccccccccchhhHHHhhhhc
Q 025660          228 CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       228 ~~~~~~~~i~v~d~a~a~~~  247 (249)
                        .+...+++++|+|+++.+
T Consensus       197 --~~~~~~~~~~Dva~~~~~  214 (253)
T 1xq6_A          197 --QTDTKTVPRADVAEVCIQ  214 (253)
T ss_dssp             --GSSCCEEEHHHHHHHHHH
T ss_pred             --CCCCcEEcHHHHHHHHHH
Confidence              124579999999999864

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.95  E-value=8.9e-28  Score=189.99  Aligned_cols=183  Identities=19%  Similarity=0.072  Sum_probs=144.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---C
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---G   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~   82 (249)
                      |++|||||+|+||++++++|+++  +|++++|+.        ++.+.+.....   . +++.+|++|++++.++++   +
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~--------~~~~~~~~~~~---~-~~~~~D~~~~~~~~~~~~~~~~   66 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRA--------GALAELAREVG---A-RALPADLADELEAKALLEEAGP   66 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCH--------HHHHHHHHHHT---C-EECCCCTTSHHHHHHHHHHHCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCH--------HHHHHHHHhcc---C-cEEEeeCCCHHHHHHHHHhcCC
Confidence            47999999999999999999998  999999986        44443322111   1 788999999999999998   8


Q ss_pred             CCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           83 CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        83 ~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                      +|+|||+||....     ...+.++..+++|+.++.++++++++.+ .++||++||..++.+.                 
T Consensus        67 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~~-----------------  128 (207)
T 2yut_A           67 LDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQV-----------------  128 (207)
T ss_dssp             EEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHSS-----------------
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccCC-----------------
Confidence            9999999997543     1223344889999999999999997666 7899999998765322                 


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSH  234 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (249)
                           .+.+.|+.||...|.+++.++.+   ++++++++|||.++|+...                      ..+...+.
T Consensus       129 -----~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------------------~~~~~~~~  181 (207)
T 2yut_A          129 -----PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA----------------------PLGGPPKG  181 (207)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG----------------------GGTSCCTT
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc----------------------ccCCCCCC
Confidence                 12467999999999999988776   5899999999999987521                      11233478


Q ss_pred             cchhhHHHhhhhc
Q 025660          235 TLFVYAIAFAFAF  247 (249)
Q Consensus       235 ~i~v~d~a~a~~~  247 (249)
                      +++.+|+|.++.+
T Consensus       182 ~~~~~dva~~~~~  194 (207)
T 2yut_A          182 ALSPEEAARKVLE  194 (207)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            9999999999865

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.95  E-value=1.1e-26  Score=191.63  Aligned_cols=199  Identities=20%  Similarity=0.104  Sum_probs=148.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++   +.++.++.+|++|++++.++++ 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   78 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPE--------TDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDF   78 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT--------SCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999987        333332 222   3467899999999999988887 


Q ss_pred             ------CCCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                            ++|++|||||....       ...+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.+   
T Consensus        79 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---  154 (271)
T 3tzq_B           79 TIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYD---  154 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCS---
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCC---
Confidence                  68999999997632       112333588999999999999888    4455 68999999987654321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                         +...|+.||.+.+.+.+.++.+   +|+++++|+||.|++|......+.   .........
T Consensus       155 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~---~~~~~~~~~  212 (271)
T 3tzq_B          155 -------------------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQ---PIVDIFATH  212 (271)
T ss_dssp             -------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CH---HHHHHHHTT
T ss_pred             -------------------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCH---HHHHHHHhc
Confidence                               2467999999999999988887   589999999999999976532211   122222111


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                              .....+...+|+|.++.|
T Consensus       213 --------~~~~r~~~p~dvA~~v~~  230 (271)
T 3tzq_B          213 --------HLAGRIGEPHEIAELVCF  230 (271)
T ss_dssp             --------STTSSCBCHHHHHHHHHH
T ss_pred             --------CCCCCCcCHHHHHHHHHH
Confidence                    122345667888877765

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.95  E-value=5e-27  Score=192.07  Aligned_cols=201  Identities=18%  Similarity=0.100  Sum_probs=142.4

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+...  .+.++.++.+|++|++++.++++ 
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~   74 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKP--------PAGEEPAAE--LGAAVRFRNADVTNEADATAALAF   74 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSC--------C--------------CEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHH--hCCceEEEEccCCCHHHHHHHHHH
Confidence            3568999999999999999999999999999999987        333322211  13467899999999999888887 


Q ss_pred             ------CCCEEEEccccCCCC---------CCChHHHhhhhHHhHHHHHHHHHHhc---------CCcceEEEEccccee
Q 025660           82 ------GCTGVLHVATPVDFE---------DKEPEEVITQRAINGTLGILKSCLKS---------GTVKRVVYTSSNAAV  137 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~---------~~~~~~~~~~~n~~~t~~l~~~~~~~---------~~~~~~v~~SS~~~~  137 (249)
                            ++|++|||||.....         ..+.++..+++|+.++.++++++.+.         +..++||++||..++
T Consensus        75 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tpc_A           75 AKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF  154 (257)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhc
Confidence                  789999999976431         11333588999999999999888653         124689999998875


Q ss_pred             eccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHH
Q 025660          138 FYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSS  214 (249)
Q Consensus       138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~  214 (249)
                      .+.+                      +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++.......    ..
T Consensus       155 ~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~  208 (257)
T 3tpc_A          155 DGQI----------------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ----DV  208 (257)
T ss_dssp             HCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-------------
T ss_pred             cCCC----------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH----HH
Confidence            4432                      2457999999999998888777   58999999999999987543211    11


Q ss_pred             HHHHcCCCcccccccccc-cccchhhHHHhhhhc
Q 025660          215 LALILGNVKLKICCVMNR-SHTLFVYAIAFAFAF  247 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~-~~~i~v~d~a~a~~~  247 (249)
                      ....        ...... ..+...+|+|.++.|
T Consensus       209 ~~~~--------~~~~p~~~r~~~~~dva~~v~~  234 (257)
T 3tpc_A          209 QDAL--------AASVPFPPRLGRAEEYAALVKH  234 (257)
T ss_dssp             -------------CCSSSSCSCBCHHHHHHHHHH
T ss_pred             HHHH--------HhcCCCCCCCCCHHHHHHHHHH
Confidence            1111        111222 457788999988876

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.95  E-value=3.1e-27  Score=194.06  Aligned_cols=203  Identities=16%  Similarity=0.139  Sum_probs=133.6

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHH-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI-   80 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~-   80 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|+++++++.+++ 
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE--------YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQ   83 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHH
Confidence            3568999999999999999999999999999999986        333322 122112346889999999999888887 


Q ss_pred             -------cCCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           81 -------AGCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 -------~~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             .++|+||||||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+   
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---  159 (266)
T 1xq1_A           84 TVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS---  159 (266)
T ss_dssp             HHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------
T ss_pred             HHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCC---
Confidence                   4689999999975431     122334789999999999988884    455 68999999987654321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                         +...|+.||...+.+.+.++.+.   +++++++|||.++||.......   ..+.....  
T Consensus       160 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~--  215 (266)
T 1xq1_A          160 -------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD---DEFKKVVI--  215 (266)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC---HHHHHHHH--
Confidence                               24579999999999999887764   8999999999999997543210   01111110  


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            .......+++.+|+|.++.|
T Consensus       216 ------~~~~~~~~~~~~dva~~~~~  235 (266)
T 1xq1_A          216 ------SRKPLGRFGEPEEVSSLVAF  235 (266)
T ss_dssp             --------------CCGGGGHHHHHH
T ss_pred             ------hcCCCCCCcCHHHHHHHHHH
Confidence                  11122357788888888765

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.95  E-value=9.2e-27  Score=191.51  Aligned_cols=198  Identities=17%  Similarity=0.131  Sum_probs=148.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+..     .++.++.+|++|.+++.++++  
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~   81 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV--------ERLKALNL-----PNTLCAQVDVTDKYTFDTAITRA   81 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH--------HHHHTTCC-----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHhhc-----CCceEEEecCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987        44443322     267899999999999888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+      
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~------  154 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFP------  154 (266)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT------
T ss_pred             HHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCC------
Confidence                 68999999997643     1123334789999999999766654    455 68999999987653321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                      +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++.........   .......    
T Consensus       155 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~----  211 (266)
T 3p19_A          155 ----------------DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQ---IKDGYDA----  211 (266)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHH---HHHHHHH----
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchh---hhHHHHh----
Confidence                            2457999999999999888776   4899999999999998754322111   1111000    


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         .......+++.+|+|.++.|
T Consensus       212 ---~~~~~~r~~~pedvA~av~~  231 (266)
T 3p19_A          212 ---WRVDMGGVLAADDVARAVLF  231 (266)
T ss_dssp             ---HHHHTTCCBCHHHHHHHHHH
T ss_pred             ---hcccccCCCCHHHHHHHHHH
Confidence               01123457889999999876

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=6.1e-27  Score=191.57  Aligned_cols=205  Identities=15%  Similarity=0.075  Sum_probs=148.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ +++...+.++.++.+|++|++++.++++ 
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDE--------AMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        333222 1211123468899999999999888876 


Q ss_pred             ------CCCEEEEccccCC-C---C--CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVD-F---E--DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~-~---~--~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|+||||||... .   .  ..+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+.   
T Consensus        84 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~---  159 (260)
T 3awd_A           84 VHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRP---  159 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSS---
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCC---
Confidence                  6899999999754 2   1  1122347899999999999888764    34 679999999865432211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                       .|.+.|+.||.+.|.+++.++.+   ++++++++|||.++||....... ..........   
T Consensus       160 -----------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~---  218 (260)
T 3awd_A          160 -----------------QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME-KPELYDAWIA---  218 (260)
T ss_dssp             -----------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT-CHHHHHHHHH---
T ss_pred             -----------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC-ChHHHHHHHh---
Confidence                             12367999999999999998877   68999999999999997541100 0011111111   


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ......+++.+|+|.++.|
T Consensus       219 ------~~~~~~~~~~~dva~~~~~  237 (260)
T 3awd_A          219 ------GTPMGRVGQPDEVASVVQF  237 (260)
T ss_dssp             ------TCTTSSCBCHHHHHHHHHH
T ss_pred             ------cCCcCCCCCHHHHHHHHHH
Confidence                  1223457889999988765

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=3.2e-27  Score=193.85  Aligned_cols=202  Identities=22%  Similarity=0.148  Sum_probs=147.8

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCC-CCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGAS-ERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~-~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+ .++.++.+|++|++++++++
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRST--------ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALA   79 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHH
Confidence            3568999999999999999999999999999999987        443322 2222222 47889999999999988887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEccccee-eccCCC
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAV-FYNDKD  143 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~-~~~~~~  143 (249)
                      +       ++|++|||||....     ...+.++..+++|+.++.++++++.+.    + .++||++||..+. .+.+  
T Consensus        80 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~--  156 (262)
T 3pk0_A           80 GRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGYP--  156 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCCT--
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCC--
Confidence            6       68999999997643     122333478999999999988877653    5 6899999997653 1111  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+   +|+++++|+||.|+++.......    ........
T Consensus       157 --------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~~~~~~~  212 (262)
T 3pk0_A          157 --------------------GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGE----EYIASMAR  212 (262)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCH----HHHHHHHT
T ss_pred             --------------------CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCH----HHHHHHHh
Confidence                                2457999999999999998887   58999999999999986432211    11111111


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .        .....+...+|+|.++.|
T Consensus       213 ~--------~p~~r~~~p~dva~~v~~  231 (262)
T 3pk0_A          213 S--------IPAGALGTPEDIGHLAAF  231 (262)
T ss_dssp             T--------STTSSCBCHHHHHHHHHH
T ss_pred             c--------CCCCCCcCHHHHHHHHHH
Confidence            1        122346677888887765

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.95  E-value=1.3e-27  Score=199.49  Aligned_cols=194  Identities=14%  Similarity=0.087  Sum_probs=145.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++|+||||||||+||++++++|+++| ++|++++|++.     . .....+..     .+++++.+|++|++++.+++++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~-----~-~~~~~l~~-----~~~~~~~~D~~d~~~l~~~~~~   72 (299)
T 2wm3_A            4 DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR-----K-KAAKELRL-----QGAEVVQGDQDDQVIMELALNG   72 (299)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT-----S-HHHHHHHH-----TTCEEEECCTTCHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC-----C-HHHHHHHH-----CCCEEEEecCCCHHHHHHHHhc
Confidence            45789999999999999999999998 99999999871     0 11122222     2578999999999999999999


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|+|||+++....       .....|+.+++++++++++.+ +++||++||..++... .       ..           
T Consensus        73 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~-~-------~~-----------  125 (299)
T 2wm3_A           73 AYATFIVTNYWES-------CSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLT-A-------GR-----------  125 (299)
T ss_dssp             CSEEEECCCHHHH-------TCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHT-T-------TS-----------
T ss_pred             CCEEEEeCCCCcc-------ccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccC-C-------Cc-----------
Confidence            9999999985321       123567889999999999988 8999998876543211 1       11           


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC--cccccccccccccchhhH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV--KLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~d  240 (249)
                       +...|+.+|..+|.+++.    ++++++++||+.+||+......+.       ....+.  .+.+..++..++|++++|
T Consensus       126 -~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~i~~~D  193 (299)
T 2wm3_A          126 -LAAAHFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQ-------KAPDGKSYLLSLPTGDVPMDGMSVSD  193 (299)
T ss_dssp             -CCCHHHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCE-------ECTTSSSEEECCCCTTSCEEEECGGG
T ss_pred             -ccCchhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCc-------ccCCCCEEEEEecCCCCccceecHHH
Confidence             235799999999998865    489999999999999754321111       111221  223345677889999999


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      +|+++++
T Consensus       194 va~~~~~  200 (299)
T 2wm3_A          194 LGPVVLS  200 (299)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998754

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.95  E-value=2.2e-27  Score=194.82  Aligned_cols=207  Identities=15%  Similarity=0.130  Sum_probs=148.9

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCC-CCCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGA-SERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++... +.++.++.+|++|++++.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   76 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQV--------DRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVV   76 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            3568999999999999999999999999999999986        333322 111111 246889999999999998888


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||....     ...+.++..+++|+.++.++++.+.    +.+ .++||++||..++.+.+   
T Consensus        77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---  152 (263)
T 3ai3_A           77 ESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLW---  152 (263)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC---
Confidence            6       68999999997543     1122334889999999988888775    344 68999999987653321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                         +...|+.||.+.+.+.+.++.+   +|+++++||||.+++|.....       ........
T Consensus       153 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~  206 (263)
T 3ai3_A          153 -------------------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKT-------AKELTKDN  206 (263)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH-------HHHHTTTT
T ss_pred             -------------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhh-------hHhhhccc
Confidence                               2457999999999999988776   589999999999999853210       00000000


Q ss_pred             -----Cc-cccccc-ccccccchhhHHHhhhhc
Q 025660          222 -----VK-LKICCV-MNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 -----~~-~~~~~~-~~~~~~i~v~d~a~a~~~  247 (249)
                           .. -.+... .....+.+.+|+|.++.|
T Consensus       207 ~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~  239 (263)
T 3ai3_A          207 GGDWKGYLQSVADEHAPIKRFASPEELANFFVF  239 (263)
T ss_dssp             TCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence                 00 001111 344578999999999876

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=1.2e-26  Score=192.07  Aligned_cols=219  Identities=16%  Similarity=0.088  Sum_probs=151.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCc-----ccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDP-----EHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+....     ..+..+..+.+ ..+...+.++.++.+|++|++++.
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            457899999999999999999999999999999853100     00111233222 222233457889999999999988


Q ss_pred             HHHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccC
Q 025660           78 AAIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~  141 (249)
                      ++++       ++|++|||||....     ...+.++..+++|+.++.++++++.+    .+..++||++||..++.+.+
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  173 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATP  173 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCC
Confidence            8876       68999999998653     12233458899999999998887743    32247899999987654321


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHH
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~  218 (249)
                                            +...|+.||.+.+.+.+.++.+   +|+++++|+||.|++|.....  .....+....
T Consensus       174 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~  229 (280)
T 3pgx_A          174 ----------------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEIFARHP  229 (280)
T ss_dssp             ----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHHHHHCG
T ss_pred             ----------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hhhhhhhcCc
Confidence                                  1457999999999999988877   589999999999999875421  0011111100


Q ss_pred             cCCCcccccccccccccchhhHHHhhhhc
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .....+........ .+++.+|+|.+++|
T Consensus       230 ~~~~~~~~~~~~~~-r~~~p~dvA~~v~~  257 (280)
T 3pgx_A          230 SFVHSFPPMPVQPN-GFMTADEVADVVAW  257 (280)
T ss_dssp             GGGGGSCCBTTBCS-SCBCHHHHHHHHHH
T ss_pred             hhhhhhhhcccCCC-CCCCHHHHHHHHHH
Confidence            00111112222233 48999999999876

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.95  E-value=1.5e-26  Score=187.54  Aligned_cols=201  Identities=16%  Similarity=0.127  Sum_probs=147.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+....   .+.+++.+|++|++++.++++  
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   74 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ--------ADLDSLVREC---PGIEPVCVDLGDWEATERALGSV   74 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHc---CCCCEEEEeCCCHHHHHHHHHHc
Confidence            457899999999999999999999999999999986        4444332211   135678999999999999987  


Q ss_pred             -CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 -GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 -~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                       ++|+|||+||....     ...+.++..+++|+.++.++++++.+.    +..++||++||..++.+.           
T Consensus        75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------  143 (244)
T 3d3w_A           75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-----------  143 (244)
T ss_dssp             CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------
T ss_pred             CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC-----------
Confidence             48999999997543     112233588999999999888877653    214799999998754321           


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICC  228 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (249)
                                 .+.+.|+.||.+.|.+++.++.+   ++++++++|||.++++......... ......         ..
T Consensus       144 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~---------~~  202 (244)
T 3d3w_A          144 -----------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP-HKAKTM---------LN  202 (244)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCST-THHHHH---------HH
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccCh-HHHHHH---------Hh
Confidence                       12467999999999999988776   4899999999999998643111000 011111         11


Q ss_pred             cccccccchhhHHHhhhhc
Q 025660          229 VMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       229 ~~~~~~~i~v~d~a~a~~~  247 (249)
                      ......+++++|+|.++.|
T Consensus       203 ~~~~~~~~~~~dva~~~~~  221 (244)
T 3d3w_A          203 RIPLGKFAEVEHVVNAILF  221 (244)
T ss_dssp             TCTTCSCBCHHHHHHHHHH
T ss_pred             hCCCCCCcCHHHHHHHHHH
Confidence            2234578999999998865

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=2.7e-27  Score=192.74  Aligned_cols=207  Identities=17%  Similarity=0.061  Sum_probs=145.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc----
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   81 (249)
                      |+||||||+|+||++++++|+++|++|++++|+.        ++.+.            .+.+|+++++++.++++    
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~------------~~~~D~~~~~~~~~~~~~~~~   61 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQ--------ADIEA------------DLSTPGGRETAVAAVLDRCGG   61 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS--------SSEEC------------CTTSHHHHHHHHHHHHHHHTT
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh--------hHccc------------cccCCcccHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999987        11110            15789999999998887    


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccccCC-------C
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMMDE-------T  150 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~e-------~  150 (249)
                      ++|+||||||.... ..++ +..+++|+.++.++++++.+.    + .++||++||..+++.... ..+..|       +
T Consensus        62 ~~d~vi~~Ag~~~~-~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           62 VLDGLVCCAGVGVT-AANS-GLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAA-ELPMVEAMLAGDEA  137 (255)
T ss_dssp             CCSEEEECCCCCTT-SSCH-HHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGG-GCHHHHHHHHTCHH
T ss_pred             CccEEEECCCCCCc-chhH-HHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEecccccccccc-ccchhhhhcccchh
Confidence            79999999998652 2334 489999999999999987654    3 589999999987654311 111111       1


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccc
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKIC  227 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (249)
                      .+..  ..+....+.+.|+.||.+.|.+++.++.+   ++++++++|||.++||....        ..............
T Consensus       138 ~~~~--~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~--------~~~~~~~~~~~~~~  207 (255)
T 2dkn_A          138 RAIE--LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA--------SKADPRYGESTRRF  207 (255)
T ss_dssp             HHHH--HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHH--------HHHCTTTHHHHHSC
T ss_pred             hhhh--hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhh--------cccchhhHHHHHHH
Confidence            0000  00011124568999999999999988765   58999999999999985321        10000000001000


Q ss_pred             ccccccccchhhHHHhhhhc
Q 025660          228 CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       228 ~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .+ ..++|++++|+|+++.|
T Consensus       208 ~~-~~~~~~~~~dva~~~~~  226 (255)
T 2dkn_A          208 VA-PLGRGSEPREVAEAIAF  226 (255)
T ss_dssp             CC-TTSSCBCHHHHHHHHHH
T ss_pred             HH-HhcCCCCHHHHHHHHHH
Confidence            12 55689999999999865

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=2.4e-26  Score=183.72  Aligned_cols=185  Identities=17%  Similarity=0.113  Sum_probs=135.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHH-HCCCeEEEEEcCCCCcccCCch-hhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLL-DHGYSVTTTVRSELDPEHRNSK-DLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ||++||||||+|+||++++++|+ ++|++|++++|++        + +.+.+..   ...+++++.+|++|++++.++++
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~--------~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~   72 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL--------KTRIPPEII---DHERVTVIEGSFQNPGXLEQAVT   72 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH--------HHHSCHHHH---TSTTEEEEECCTTCHHHHHHHHT
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc--------cccchhhcc---CCCceEEEECCCCCHHHHHHHHc
Confidence            45679999999999999999999 8999999999987        4 4444321   12468999999999999999999


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      ++|+|||+||..              |+. ++++++++++.+ .++||++||..++...+...           ..... 
T Consensus        73 ~~d~vv~~ag~~--------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~-----------~~~~~-  124 (221)
T 3r6d_A           73 NAEVVFVGAMES--------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVAL-----------EKWTF-  124 (221)
T ss_dssp             TCSEEEESCCCC--------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHH-----------HHHHH-
T ss_pred             CCCEEEEcCCCC--------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCccc-----------ccccc-
Confidence            999999999852              334 899999999988 88999999988654321100           00000 


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccccccc-ccccchhhH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMN-RSHTLFVYA  240 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~d  240 (249)
                      ..+.+.|+.+|...|.+++.    .++++++||||.++++.......               . ...... ...+++.+|
T Consensus       125 ~~~~~~y~~~K~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~---------------~-~~~~~~~~~~~~~~~d  184 (221)
T 3r6d_A          125 DNLPISYVQGERQARNVLRE----SNLNYTILRLTWLYNDPEXTDYE---------------L-IPEGAQFNDAQVSREA  184 (221)
T ss_dssp             HTSCHHHHHHHHHHHHHHHH----SCSEEEEEEECEEECCTTCCCCE---------------E-ECTTSCCCCCEEEHHH
T ss_pred             cccccHHHHHHHHHHHHHHh----CCCCEEEEechhhcCCCCCccee---------------e-ccCCccCCCceeeHHH
Confidence            11122799999999988764    69999999999999983221100               0 001111 123788899


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      +|++++|
T Consensus       185 vA~~~~~  191 (221)
T 3r6d_A          185 VVKAIFD  191 (221)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998876

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.95  E-value=5.8e-27  Score=190.29  Aligned_cols=203  Identities=14%  Similarity=0.115  Sum_probs=139.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEE-cCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |+.+++++|||||+|+||++++++|+++|++|++++ |+.        +..+.+ ..+...+.++.++.+|++|++++.+
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAS--------TSLDATAEEFKAAGINVVVAKGDVKNPEDVEN   72 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTC--------SHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            666778999999999999999999999999999994 554        222221 1111123468899999999999988


Q ss_pred             HHc-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccC
Q 025660           79 AIA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~  141 (249)
                      +++       ++|+||||||....      ..+++ +..+++|+.++.++++.+.+    .+ .++||++||..++++.+
T Consensus        73 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~  150 (247)
T 2hq1_A           73 MVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDW-DDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNA  150 (247)
T ss_dssp             HHHHHHHHHSCCCEEEECC---------------C-HHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCC
Confidence            876       68999999997542      22333 48899999998888877654    45 68999999986554321


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHH
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~  218 (249)
                                            +...|+.||.+.+.+.+.++.+.   ++++++++||.+.++..... +   .......
T Consensus       151 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~  204 (247)
T 2hq1_A          151 ----------------------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL-P---DKVKEMY  204 (247)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-C---HHHHHHH
T ss_pred             ----------------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc-c---hHHHHHH
Confidence                                  13579999999999999887764   89999999999988753221 1   1111211


Q ss_pred             cCCCcccccccccccccchhhHHHhhhhc
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ..        ......+++.+|+|.++.|
T Consensus       205 ~~--------~~~~~~~~~~~dva~~~~~  225 (247)
T 2hq1_A          205 LN--------NIPLKRFGTPEEVANVVGF  225 (247)
T ss_dssp             HT--------TSTTSSCBCHHHHHHHHHH
T ss_pred             Hh--------hCCCCCCCCHHHHHHHHHH
Confidence            11        1223468899999998765

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.95  E-value=7.5e-27  Score=192.74  Aligned_cols=203  Identities=15%  Similarity=0.072  Sum_probs=148.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ...+...++...+.++.++.+|++|++++.++.+  
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD--------GVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL  101 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--------HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH--------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999765        3333333333344578899999999998887754  


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          ++|+||||||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+       
T Consensus       102 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~-------  173 (273)
T 3uf0_A          102 AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGR-------  173 (273)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS-------
T ss_pred             HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCC-------
Confidence                689999999986541     223335889999999999888774    445 67999999987654321       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccc
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK  225 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (249)
                                     +...|+.||.+.+.+.+.++.+   +|+++++|+||.|++|........ .....         .
T Consensus       174 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~---------~  228 (273)
T 3uf0_A          174 ---------------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD-DERAA---------E  228 (273)
T ss_dssp             ---------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-HHHHH---------H
T ss_pred             ---------------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC-HHHHH---------H
Confidence                           2457999999999999988877   589999999999999864321000 00111         1


Q ss_pred             ccccccccccchhhHHHhhhhc
Q 025660          226 ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +........+...+|+|.++.|
T Consensus       229 ~~~~~p~~r~~~pedva~~v~~  250 (273)
T 3uf0_A          229 ITARIPAGRWATPEDMVGPAVF  250 (273)
T ss_dssp             HHHHSTTSSCBCGGGGHHHHHH
T ss_pred             HHhcCCCCCCCCHHHHHHHHHH
Confidence            1122334567778888888765

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.95  E-value=1.7e-26  Score=187.82  Aligned_cols=202  Identities=17%  Similarity=0.138  Sum_probs=146.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cC-CCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NL-PGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~-~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +|++|||||+|+||++++++|+++|++|++++|+.        +..+.+. ++ ...+.++.++.+|++|++++.++++ 
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSA--------ETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAA   73 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            46899999999999999999999999999999986        4333321 11 1223468899999999999988876 


Q ss_pred             ------CCCEEEEccccCCCCC--------CChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCC
Q 025660           82 ------GCTGVLHVATPVDFED--------KEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~~--------~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                            ++|+||||||......        .+.++..+++|+.++.++++.+.    +.+ .++||++||..++.+.+  
T Consensus        74 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--  150 (250)
T 2cfc_A           74 TMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFP--  150 (250)
T ss_dssp             HHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC--
Confidence                  7899999999754311        12234788999999877666554    445 68999999987653321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+.   +++++++|||.++||........  ..+...+..
T Consensus       151 --------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~  208 (250)
T 2cfc_A          151 --------------------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ--PELRDQVLA  208 (250)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS--HHHHHHHHT
T ss_pred             --------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC--HHHHHHHHh
Confidence                                24579999999999999887764   89999999999999975321010  111111111


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .        .....+.+.+|+|.++.|
T Consensus       209 ~--------~~~~~~~~~~dva~~~~~  227 (250)
T 2cfc_A          209 R--------IPQKEIGTAAQVADAVMF  227 (250)
T ss_dssp             T--------CTTCSCBCHHHHHHHHHH
T ss_pred             c--------CCCCCCcCHHHHHHHHHH
Confidence            1        223457788999988765

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.95  E-value=1.3e-26  Score=188.33  Aligned_cols=204  Identities=15%  Similarity=0.113  Sum_probs=153.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|++++.++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQ--------ASAEKFENSMKEKGFKARGLVLNISDIESIQNF   72 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            666788999999999999999999999999999999987        443332 22222245789999999999998888


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|+||||||....     ...+.++..+++|+.++.++++.+.+    .+ .++||++||..++.+.+  
T Consensus        73 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--  149 (247)
T 3lyl_A           73 FAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNP--  149 (247)
T ss_dssp             HHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCC--
Confidence            76       47999999998644     12233358899999999998887654    34 57999999987654331  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+   +++++++++||.+.++.......    ......  
T Consensus       150 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~--  203 (247)
T 3lyl_A          150 --------------------GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD----EQKSFI--  203 (247)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH----HHHHHH--
T ss_pred             --------------------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH----HHHHHH--
Confidence                                2457999999999888888776   48999999999999987644211    111211  


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ........+.+.+|+|.++.|
T Consensus       204 ------~~~~~~~~~~~~~dva~~i~~  224 (247)
T 3lyl_A          204 ------ATKIPSGQIGEPKDIAAAVAF  224 (247)
T ss_dssp             ------HTTSTTCCCBCHHHHHHHHHH
T ss_pred             ------hhcCCCCCCcCHHHHHHHHHH
Confidence                  222344568889999988765

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.95  E-value=5.9e-27  Score=190.29  Aligned_cols=201  Identities=15%  Similarity=0.063  Sum_probs=146.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+ +.. .+.++.++.+|++|++++.++++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSG--------ERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFE   77 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHH
Confidence            467899999999999999999999999999999986        43333211 111 12368899999999999988886


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|+|||+||.....     ..+.++..+++|+.++.++++.+    ++.+ .++||++||..++++.+    
T Consensus        78 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----  152 (248)
T 2pnf_A           78 EIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNV----  152 (248)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCT----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCC----
Confidence                   789999999975431     12233478999999997766655    3445 68999999986554321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||...+.+.+.++.+   .+++++++|||.++++..... .   .........  
T Consensus       153 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~--  208 (248)
T 2pnf_A          153 ------------------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-S---EEIKQKYKE--  208 (248)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-C---HHHHHHHHH--
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-c---HHHHHHHHh--
Confidence                              1357999999999999888765   379999999999999865321 1   111111111  


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ......+++.+|+|.++.|
T Consensus       209 ------~~~~~~~~~~~dva~~~~~  227 (248)
T 2pnf_A          209 ------QIPLGRFGSPEEVANVVLF  227 (248)
T ss_dssp             ------TCTTSSCBCHHHHHHHHHH
T ss_pred             ------cCCCCCccCHHHHHHHHHH
Confidence                  1123468899999998765

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.8e-26  Score=189.12  Aligned_cols=202  Identities=19%  Similarity=0.156  Sum_probs=145.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCC-------CCeEEEEcCCCChhh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGAS-------ERLRIFHADLSHPDG   75 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~-------~~~~~~~~Dl~~~~~   75 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+       .++.++.+|++|+++
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   77 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDR--------AAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARA   77 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTC------------CCEEEECCTTSHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHHHhcCccccccCcceEEEEecCCCHHH
Confidence            457899999999999999999999999999999986        443332 2222212       467899999999999


Q ss_pred             HHHHHcC-------C-CEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceee
Q 025660           76 FDAAIAG-------C-TGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVF  138 (249)
Q Consensus        76 ~~~~~~~-------~-d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~  138 (249)
                      +.++++.       + |+||||||....     ...+.++..+++|+.++.++++++.+.    +..++||++||..++.
T Consensus        78 ~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  157 (264)
T 2pd6_A           78 ARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV  157 (264)
T ss_dssp             HHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH
T ss_pred             HHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc
Confidence            8888764       4 999999997543     122233488999999999999988653    2136999999986543


Q ss_pred             ccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHH
Q 025660          139 YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSL  215 (249)
Q Consensus       139 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~  215 (249)
                      +.+                      +...|+.||.+.+.+.+.++.+   ++++++++|||.++||.......    .+.
T Consensus       158 ~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~  211 (264)
T 2pd6_A          158 GNV----------------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ----KVV  211 (264)
T ss_dssp             CCT----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------
T ss_pred             CCC----------------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH----HHH
Confidence            321                      2457999999999999988776   68999999999999987532111    010


Q ss_pred             HHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          216 ALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .        .+........+.+.+|+|.++.|
T Consensus       212 ~--------~~~~~~~~~~~~~~~dva~~~~~  235 (264)
T 2pd6_A          212 D--------KITEMIPMGHLGDPEDVADVVAF  235 (264)
T ss_dssp             ---------CTGGGCTTCSCBCHHHHHHHHHH
T ss_pred             H--------HHHHhCCCCCCCCHHHHHHHHHH
Confidence            0        01112223467889999998765

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.95  E-value=1.7e-26  Score=191.31  Aligned_cols=219  Identities=16%  Similarity=0.101  Sum_probs=150.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCccc----CCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH----RNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|++.....    ...+..+.+ ......+.++.++.+|++|++++.+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            46899999999999999999999999999999997421000    001122211 1222234578899999999999888


Q ss_pred             HHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCC
Q 025660           79 AIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      +++       ++|++|||||....     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.. 
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-  166 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSANF-  166 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCT-
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCCCC-
Confidence            876       68999999997653     1223335889999999999988864    345 57999999987653321 


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHc
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~  219 (249)
                                           +...|+.||.+.+.+.+.++.+   +|+++++|+||.|++|......  ....+.....
T Consensus       167 ---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~  223 (281)
T 3s55_A          167 ---------------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDF--VFGTMRPDLE  223 (281)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHH--HHHC------
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchh--hhcccccccc
Confidence                                 2457999999999999998886   4899999999999999764310  0000000000


Q ss_pred             CCC-----cccccccccccccchhhHHHhhhhc
Q 025660          220 GNV-----KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       220 ~~~-----~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ...     ............|.+.+|+|.++.|
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~  256 (281)
T 3s55_A          224 KPTLKDVESVFASLHLQYAPFLKPEEVTRAVLF  256 (281)
T ss_dssp             -CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHH
T ss_pred             ccchhHHHHHHHhhhccCcCCCCHHHHHHHHHH
Confidence            000     0000112223678999999999876

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.95  E-value=9.8e-27  Score=190.66  Aligned_cols=206  Identities=17%  Similarity=0.096  Sum_probs=147.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHH--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI--   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~--   80 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.+++  
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ--------KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT   79 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        333322 222112346888999999999988887  


Q ss_pred             ------cCCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           81 ------AGCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        81 ------~~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            .++|+||||||....     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+    
T Consensus        80 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----  154 (260)
T 2ae2_A           80 VANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVP----  154 (260)
T ss_dssp             HHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCT----
T ss_pred             HHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC----
Confidence                  468999999997543     1122334789999999999988874    344 68999999987543221    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||...+.+.+.++.+.   ++++++|+||.+.++........ . .....+    
T Consensus       155 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~-~~~~~~----  210 (260)
T 2ae2_A          155 ------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQD-P-EQKENL----  210 (260)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTS-H-HHHHHH----
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccC-h-hhHHHH----
Confidence                              24579999999999999988764   89999999999988753211000 0 000000    


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ..+........+.+.+|+|.++.|
T Consensus       211 -~~~~~~~~~~~~~~~~dvA~~v~~  234 (260)
T 2ae2_A          211 -NKLIDRCALRRMGEPKELAAMVAF  234 (260)
T ss_dssp             -HHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred             -HHHHhcCCCCCCCCHHHHHHHHHH
Confidence             011122234568899999988765

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.95  E-value=9.6e-27  Score=198.17  Aligned_cols=196  Identities=16%  Similarity=0.096  Sum_probs=145.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      +++||||||||+||++|+++|+++|++|++++|+..    ...++...+..+.  ..+++++.+|++|++++.++++  +
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~----~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~   83 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGP----RSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHE   83 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSC----CCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCC----CChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCC
Confidence            468999999999999999999999999999999761    1112222222221  1368999999999999999999  9


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|+|||+|+.              .|+.++.+|+++|++.+.+++||+ |+   ++.      ..+|..+.         
T Consensus        84 ~d~Vi~~a~~--------------~n~~~~~~l~~aa~~~g~v~~~v~-S~---~g~------~~~e~~~~---------  130 (346)
T 3i6i_A           84 IDIVVSTVGG--------------ESILDQIALVKAMKAVGTIKRFLP-SE---FGH------DVNRADPV---------  130 (346)
T ss_dssp             CCEEEECCCG--------------GGGGGHHHHHHHHHHHCCCSEEEC-SC---CSS------CTTTCCCC---------
T ss_pred             CCEEEECCch--------------hhHHHHHHHHHHHHHcCCceEEee-cc---cCC------CCCccCcC---------
Confidence            9999999996              278899999999999876788886 43   321      13333332         


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                      .|.+.|+.+|..+|.+++.    ++++++++|||.++|+.....    .........++....+++++..++|+|++|+|
T Consensus       131 ~p~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~----~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva  202 (346)
T 3i6i_A          131 EPGLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNN----IHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIG  202 (346)
T ss_dssp             TTHHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHH----cCCCEEEEEecccccccCccc----cccccccCCCceEEEccCCCceEEecCHHHHH
Confidence            2456899999999998876    689999999999999764322    11111111333444567888899999999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      ++++.
T Consensus       203 ~~~~~  207 (346)
T 3i6i_A          203 KFTMK  207 (346)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.95  E-value=7.4e-27  Score=191.05  Aligned_cols=202  Identities=15%  Similarity=0.048  Sum_probs=150.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   82 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKS--------EGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKA   82 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999987        443332 2222234578999999999999888876 


Q ss_pred             ------CCCEEEEccccCCCC----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 ------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                            ++|++|||||.....    ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+      
T Consensus        83 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  155 (256)
T 3gaf_A           83 ALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNV------  155 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCT------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCC------
Confidence                  689999999976441    122334889999999999998874    334 57999999987643321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                      +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++.......   ....+..      
T Consensus       156 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~------  210 (256)
T 3gaf_A          156 ----------------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT---PEIERAM------  210 (256)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC---HHHHHHH------
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC---HHHHHHH------
Confidence                            24579999999999999888763   8999999999999875322111   0111111      


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ........+.+.+|+|.++.|
T Consensus       211 --~~~~p~~r~~~~~dva~~~~~  231 (256)
T 3gaf_A          211 --LKHTPLGRLGEAQDIANAALF  231 (256)
T ss_dssp             --HTTCTTSSCBCHHHHHHHHHH
T ss_pred             --HhcCCCCCCCCHHHHHHHHHH
Confidence              222334567888999988766

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.94  E-value=2.3e-26  Score=191.53  Aligned_cols=181  Identities=17%  Similarity=0.051  Sum_probs=139.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..  ..++.++.+|++|++++.++++  
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDT--------RKGEAAARTM--AGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHTTS--SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh--cCCeeEEEcCCCCHHHHHHHHHhc
Confidence            468999999999999999999999999999999987        5544443222  3478999999999999999998  


Q ss_pred             -CCCEEEEccccCCC----CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchh
Q 025660           82 -GCTGVLHVATPVDF----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (249)
Q Consensus        82 -~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (249)
                       ++|+||||||....    ..+++ +..+++|+.++.++++++.+.. .++||++||..++.+.........+..+    
T Consensus        85 ~~iD~lv~nAg~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~~~----  158 (291)
T 3rd5_A           85 SGADVLINNAGIMAVPYALTVDGF-ESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRSRR----  158 (291)
T ss_dssp             CCEEEEEECCCCCSCCCCBCTTSC-BHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSSSC----
T ss_pred             CCCCEEEECCcCCCCcccCCHHHH-HHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcccccccccC----
Confidence             56999999998653    23344 4899999999999999999887 6799999998876443222111111111    


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHc---C--CcEEEeecCeEeCCCCCC
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEH---G--LDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~vrp~~v~g~~~~~  205 (249)
                           ..+...|+.||.+.+.+.+.++.+.   +  +++++|+||.|.++....
T Consensus       159 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~  207 (291)
T 3rd5_A          159 -----YSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA  207 (291)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc
Confidence                 1234579999999998888877664   5  999999999999987543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.94  E-value=1.4e-26  Score=188.46  Aligned_cols=199  Identities=18%  Similarity=0.146  Sum_probs=148.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+.+..  ..+...+.+|++|+++++++++  
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSE--------SGAQAISDYL--GDNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--cccceEEEEeCCCHHHHHHHHHHH
Confidence            458999999999999999999999999999999987        4444332211  1246789999999999888887  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++|||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+      
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------  150 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNA------  150 (248)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC------
Confidence                 68999999997654     12233458899999999998888754    44 57999999987654331      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                      +...|+.||.+.+.+.+.++.+   +|+++++|+||.+.++........   .....       
T Consensus       151 ----------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~-------  204 (248)
T 3op4_A          151 ----------------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDE---QRTAT-------  204 (248)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHH---HHHHH-------
T ss_pred             ----------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHH---HHHHH-------
Confidence                            2467999999999888888776   389999999999999875432111   11111       


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ........+...+|+|.++.|
T Consensus       205 --~~~~p~~r~~~p~dva~~v~~  225 (248)
T 3op4_A          205 --LAQVPAGRLGDPREIASAVAF  225 (248)
T ss_dssp             --HHTCTTCSCBCHHHHHHHHHH
T ss_pred             --HhcCCCCCCcCHHHHHHHHHH
Confidence              122234567788899888765

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.94  E-value=3.1e-26  Score=189.43  Aligned_cols=206  Identities=17%  Similarity=0.115  Sum_probs=149.3

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+.+.  .+.++.++.+|++|++++++++
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE--------DAAVRVANE--IGSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHH--HCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHH--hCCceEEEEecCCCHHHHHHHH
Confidence            334568999999999999999999999999999999987        444443222  1346889999999999988887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+   
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---  168 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIA---  168 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCT---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCC---
Confidence            6       68999999997543     11233457889999999888887743    34 57999999987653321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCC--CccHHHHHHHHc
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF--AGSVRSSLALIL  219 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~--~~~~~~~~~~~~  219 (249)
                                         +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++......  .........   
T Consensus       169 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---  226 (277)
T 4dqx_A          169 -------------------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRS---  226 (277)
T ss_dssp             -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHH---
T ss_pred             -------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHH---
Confidence                               24579999999999998887764   899999999999887521100  000000100   


Q ss_pred             CCCcccccccccccccchhhHHHhhhhc
Q 025660          220 GNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           .+........+...+|+|.+++|
T Consensus       227 -----~~~~~~~~~r~~~pedvA~~v~~  249 (277)
T 4dqx_A          227 -----DFNARAVMDRMGTAEEIAEAMLF  249 (277)
T ss_dssp             -----HHHTTSTTCSCBCHHHHHHHHHH
T ss_pred             -----HHHhcCcccCCcCHHHHHHHHHH
Confidence                 02223344567789999998876

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.94  E-value=1.2e-26  Score=189.54  Aligned_cols=206  Identities=14%  Similarity=0.058  Sum_probs=147.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..      .+..+.+..   .+.++.++.+|++|++++.++++  
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~l~~---~~~~~~~~~~D~~~~~~v~~~~~~~   73 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP------APALAEIAR---HGVKAVHHPADLSDVAQIEALFALA   73 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC------HHHHHHHHT---TSCCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch------HHHHHHHHh---cCCceEEEeCCCCCHHHHHHHHHHH
Confidence            4679999999999999999999999999999999871      112222322   23468889999999999998887  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++.+.+    ++.+ .++||++||..++.+.+      
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  146 (255)
T 2q2v_A           74 EREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGST------  146 (255)
T ss_dssp             HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCC------
Confidence                 79999999997543     122333588999999776666554    4555 68999999987653321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc-
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK-  223 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-  223 (249)
                                      +...|+.||...+.+.+.++.+.   |+++++|+||.+++|....    ....... . +... 
T Consensus       147 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~-~-~~~~~  204 (255)
T 2q2v_A          147 ----------------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK----QIDDRAA-N-GGDPL  204 (255)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH----HHHHHHH-H-TCCHH
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh----hcccccc-c-ccchH
Confidence                            13579999999999999988773   7999999999999985321    0000000 0 0000 


Q ss_pred             ---ccc-cccccccccchhhHHHhhhhc
Q 025660          224 ---LKI-CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ---~~~-~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         ..+ ........+++.+|+|.+++|
T Consensus       205 ~~~~~~~~~~~p~~~~~~~~dvA~~~~~  232 (255)
T 2q2v_A          205 QAQHDLLAEKQPSLAFVTPEHLGELVLF  232 (255)
T ss_dssp             HHHHHHHTTTCTTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence               011 222344578999999999876

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=3.4e-26  Score=184.81  Aligned_cols=183  Identities=15%  Similarity=0.058  Sum_probs=125.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      +||+||||||+|+||++++++|+++| ++|++++|++        ++...+.     ..+++++.+|++|++++.+++++
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~--------~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~   88 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP--------AKIHKPY-----PTNSQIIMGDVLNHAALKQAMQG   88 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG--------GGSCSSC-----CTTEEEEECCTTCHHHHHHHHTT
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh--------hhhcccc-----cCCcEEEEecCCCHHHHHHHhcC
Confidence            46789999999999999999999999 8999999987        3332221     13688999999999999999999


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|+|||+|+...     .        ...++++++++++.+ .++||++||..++...+....+..+..+          
T Consensus        89 ~D~vv~~a~~~~-----~--------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~----------  144 (236)
T 3qvo_A           89 QDIVYANLTGED-----L--------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVI----------  144 (236)
T ss_dssp             CSEEEEECCSTT-----H--------HHHHHHHHHHHHHTT-CCEEEEECCCCC--------------------------
T ss_pred             CCEEEEcCCCCc-----h--------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcc----------
Confidence            999999998521     1        134678999999988 8999999999876554332222233322          


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccccccc-ccccchhhHH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMN-RSHTLFVYAI  241 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~d~  241 (249)
                         ..+...|..+|..+.    .+++++++||||.++++.....                . ....... ...+++.+|+
T Consensus       145 ---~~~~~~~~~~~~~l~----~~gi~~~~vrPg~i~~~~~~~~----------------~-~~~~~~~~~~~~i~~~Dv  200 (236)
T 3qvo_A          145 ---GEPLKPFRRAADAIE----ASGLEYTILRPAWLTDEDIIDY----------------E-LTSRNEPFKGTIVSRKSV  200 (236)
T ss_dssp             ---CGGGHHHHHHHHHHH----TSCSEEEEEEECEEECCSCCCC----------------E-EECTTSCCSCSEEEHHHH
T ss_pred             ---cchHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCcce----------------E-EeccCCCCCCcEECHHHH
Confidence               113333444444442    3699999999999999753221                0 0011111 2358899999


Q ss_pred             Hhhhhc
Q 025660          242 AFAFAF  247 (249)
Q Consensus       242 a~a~~~  247 (249)
                      |++++|
T Consensus       201 A~~i~~  206 (236)
T 3qvo_A          201 AALITD  206 (236)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999876

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.94  E-value=3.4e-26  Score=187.52  Aligned_cols=193  Identities=14%  Similarity=0.135  Sum_probs=143.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++.   .++.++.+|++|++++.++++ 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~   74 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD--------EEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDT   74 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhh---cCceEEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        444333 2221   247889999999999998887 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHH----HHhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++.    +++.+ .++||++||..++.+.+     
T Consensus        75 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  148 (260)
T 1nff_A           75 AVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTV-----  148 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCC-----
Confidence                  79999999997543     11223347899999999665554    44555 68999999987654321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||...+.+.+.++.+   +|+++++||||.++++....  ..           .. 
T Consensus       149 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~-----------~~-  197 (260)
T 1nff_A          149 -----------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW--VP-----------ED-  197 (260)
T ss_dssp             -----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT--SC-----------TT-
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc--ch-----------hh-
Confidence                             2357999999999999988776   58999999999999986431  00           00 


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +.   ......+.+.+|+|.++.|
T Consensus       198 ~~---~~~~~~~~~~~dvA~~v~~  218 (260)
T 1nff_A          198 IF---QTALGRAAEPVEVSNLVVY  218 (260)
T ss_dssp             CS---CCSSSSCBCHHHHHHHHHH
T ss_pred             HH---hCccCCCCCHHHHHHHHHH
Confidence            00   1123457778888887765

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.94  E-value=2.5e-26  Score=189.26  Aligned_cols=199  Identities=15%  Similarity=0.109  Sum_probs=147.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       +..+.+ ..+...+.++.++.+|++|++++.++++ 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~   99 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSA-------GAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAA   99 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCCh-------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4688999999999999999999999999999998541       222222 2222234578899999999999888876 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+     
T Consensus       100 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  173 (269)
T 4dmm_A          100 VIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNP-----  173 (269)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC-----
Confidence                  689999999986441     223345889999999999888774    344 57999999987654332     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++....       .....      
T Consensus       174 -----------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-------~~~~~------  223 (269)
T 4dmm_A          174 -----------------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE-------LAAEK------  223 (269)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH-------HHHHH------
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc-------ccHHH------
Confidence                             1457999999999888888776   48999999999999986532       11111      


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        +........+...+|+|.++.|
T Consensus       224 --~~~~~p~~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          224 --LLEVIPLGRYGEAAEVAGVVRF  245 (269)
T ss_dssp             --HGGGCTTSSCBCHHHHHHHHHH
T ss_pred             --HHhcCCCCCCCCHHHHHHHHHH
Confidence              1122334567778888888766

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.94  E-value=2.2e-26  Score=187.64  Aligned_cols=202  Identities=17%  Similarity=0.136  Sum_probs=145.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCe-EEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERL-RIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~-~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++   +.++ .++.+|++|++++.++++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~   78 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREA--------AALDRAAQEL---GAAVAARIVADVTDAEAMTAAAA   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh---cccceeEEEEecCCHHHHHHHHH
Confidence            457899999999999999999999999999999986        4433322 21   1245 789999999999888874


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||.....     ..+.++..+++|+.++.++++.+    ++.+ .++||++||..++.+.+.    
T Consensus        79 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~----  153 (254)
T 2wsb_A           79 EAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRP----  153 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSS----
T ss_pred             HHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCC----
Confidence                  689999999975431     11223478899999977766655    4455 689999999876433211    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                      .|...|+.||.+.|.+.+.++.+.   +++++++|||.++|+....... .........     
T Consensus       154 ----------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~-----  211 (254)
T 2wsb_A          154 ----------------QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE-RPELFETWL-----  211 (254)
T ss_dssp             ----------------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT-CHHHHHHHH-----
T ss_pred             ----------------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc-ChHHHHHHH-----
Confidence                            123679999999999999887764   8999999999999985421100 001111111     


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                          .......+++.+|+|.++.|
T Consensus       212 ----~~~~~~~~~~~~dva~~~~~  231 (254)
T 2wsb_A          212 ----DMTPMGRCGEPSEIAAAALF  231 (254)
T ss_dssp             ----HTSTTSSCBCHHHHHHHHHH
T ss_pred             ----hcCCCCCCCCHHHHHHHHHH
Confidence                11223568899999998765

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.94  E-value=5.8e-28  Score=199.04  Aligned_cols=209  Identities=20%  Similarity=0.090  Sum_probs=150.0

Q ss_pred             CCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ..++++||||||+|+||++++++|+++|++|++++|+..       +..+.+ .++...+.++.++.+|++|++++.+++
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   90 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS-------KAAEEVVAELKKLGAQGVAIQADISKPSEVVALF   90 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCch-------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            345679999999999999999999999999999999431       332222 122112346889999999999998888


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEccccee-eccCCCccc
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAV-FYNDKDVDM  146 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~-~~~~~~~~~  146 (249)
                      +       ++|+|||+||.....     ..+.++..+++|+.++.++++++.+.- ..++||++||..++ .+.+     
T Consensus        91 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  165 (274)
T 1ja9_A           91 DKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP-----  165 (274)
T ss_dssp             HHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC-----
Confidence            7       789999999975431     112234789999999999999887651 02699999998765 2211     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCC----C----ccH-HHH
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF----A----GSV-RSS  214 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~----~----~~~-~~~  214 (249)
                                       +...|+.||.+.|.+++.++.+.   +++++++|||.++++......    +    ... ...
T Consensus       166 -----------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  228 (274)
T 1ja9_A          166 -----------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKI  228 (274)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHH
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHH
Confidence                             23579999999999999888764   899999999999987532100    0    000 011


Q ss_pred             HHHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          215 LALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ..        .+.......+|++++|+|.++.|
T Consensus       229 ~~--------~~~~~~~~~~~~~~~dva~~i~~  253 (274)
T 1ja9_A          229 DE--------GLANMNPLKRIGYPADIGRAVSA  253 (274)
T ss_dssp             HH--------HHHHTSTTSSCBCHHHHHHHHHH
T ss_pred             HH--------HHHhcCCCCCccCHHHHHHHHHH
Confidence            11        11233445679999999998865

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.94  E-value=5.4e-27  Score=193.99  Aligned_cols=209  Identities=19%  Similarity=0.123  Sum_probs=149.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   92 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE--------EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA   92 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        333322 2221123468899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc------CCcceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS------GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++++.+.      + .++||++||..++.+.+   
T Consensus        93 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---  168 (277)
T 2rhc_B           93 VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVV---  168 (277)
T ss_dssp             HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCT---
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCC---
Confidence                  68999999997543     112233488999999999999987654      4 57999999987643321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC-
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG-  220 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~-  220 (249)
                                         +...|+.||.+.+.+.+.++.+.   |+++++|+||.++++....    ....+...... 
T Consensus       169 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~  225 (277)
T 2rhc_B          169 -------------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS----VREHYSDIWEVS  225 (277)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH----HHHHHHHHHTCC
T ss_pred             -------------------CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh----hhhhcccccccc
Confidence                               24579999999999999887763   7999999999999875321    00000000000 


Q ss_pred             -CCc-ccccccccccccchhhHHHhhhhc
Q 025660          221 -NVK-LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 -~~~-~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ... ..+........+++.+|+|.++.|
T Consensus       226 ~~~~~~~~~~~~p~~r~~~~~dvA~~v~~  254 (277)
T 2rhc_B          226 TEEAFDRITARVPIGRYVQPSEVAEMVAY  254 (277)
T ss_dssp             HHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             000 011222344578999999999876

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.94  E-value=5.6e-26  Score=185.87  Aligned_cols=205  Identities=14%  Similarity=0.045  Sum_probs=147.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   76 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTK--------EKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ   76 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            467999999999999999999999999999999987        444433 2333344578999999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|++|||||....     ...+.++..+++|+.++.++++++.+    .+..++||++||..++.+.+     
T Consensus        77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  151 (257)
T 3imf_A           77 IDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP-----  151 (257)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC-----
Confidence                  68999999996543     12233358899999999998888742    22257999999987643321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                       +...|+.||.+.+.+.+.++.+    +|+++++|+||.|.++........      .   ...
T Consensus       152 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~------~---~~~  205 (257)
T 3imf_A          152 -----------------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI------S---EEM  205 (257)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC----------------CC
T ss_pred             -----------------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc------C---HHH
Confidence                             1457999999888888776643    489999999999999864321100      0   000


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .-.+........+...+|+|.++.|
T Consensus       206 ~~~~~~~~p~~r~~~pedvA~~v~~  230 (257)
T 3imf_A          206 AKRTIQSVPLGRLGTPEEIAGLAYY  230 (257)
T ss_dssp             SHHHHTTSTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            0011122233457788888888765

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.94  E-value=1.1e-26  Score=189.74  Aligned_cols=203  Identities=18%  Similarity=0.153  Sum_probs=147.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcC-CCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS-ELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+ .        +..+.+ .++...+.++.++.+|++|++++.++++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAP--------ANIDETIASMRADGGDAAFFAADLATSEACQQLVD   77 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCC--------TTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCch--------hhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            45789999999999999999999999999999998 5        222222 1111123468899999999999998887


Q ss_pred             -------CCCEEEEcccc-CCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc--------CCcceEEEEcccceeecc
Q 025660           82 -------GCTGVLHVATP-VDF-----EDKEPEEVITQRAINGTLGILKSCLKS--------GTVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        82 -------~~d~vih~a~~-~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~--------~~~~~~v~~SS~~~~~~~  140 (249)
                             ++|+||||||. ...     ...+.++..+++|+.++.++++++.+.        +..++||++||..++...
T Consensus        78 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  157 (258)
T 3afn_B           78 EFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG  157 (258)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC
T ss_pred             HHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC
Confidence                   79999999997 322     112223478899999999988876432        112799999998754311


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHH
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~  217 (249)
                       .                    .+...|+.||.+.|.+.+.++.+.   +++++++|||.++++......    ..+...
T Consensus       158 -~--------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~  212 (258)
T 3afn_B          158 -G--------------------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT----QDVRDR  212 (258)
T ss_dssp             -C--------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC----HHHHHH
T ss_pred             -C--------------------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC----HHHHHH
Confidence             0                    124679999999999999887764   899999999999998754321    122222


Q ss_pred             HcCCCcccccccccccccchhhHHHhhhhc
Q 025660          218 ILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ....        .....+++++|+|.++.|
T Consensus       213 ~~~~--------~~~~~~~~~~dva~~~~~  234 (258)
T 3afn_B          213 ISNG--------IPMGRFGTAEEMAPAFLF  234 (258)
T ss_dssp             HHTT--------CTTCSCBCGGGTHHHHHH
T ss_pred             Hhcc--------CCCCcCCCHHHHHHHHHH
Confidence            2211        223468899999988765

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.94  E-value=3.3e-26  Score=187.77  Aligned_cols=206  Identities=16%  Similarity=0.057  Sum_probs=147.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++.   .++.++.+|++|++++.++++ 
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~   79 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDV--------MAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQK   79 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999986        4444332 222   157889999999999988887 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++++.+.    ++.++||++||..++.+.+     
T Consensus        80 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  154 (263)
T 3ak4_A           80 AIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP-----  154 (263)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT-----
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC-----
Confidence                  79999999997543     112233588999999999988877643    2147999999987543221     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC--
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN--  221 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~--  221 (249)
                                       +...|+.||...+.+.+.++.+.   |+++++||||.++++.....    ...... ..+.  
T Consensus       155 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~-~~~~~~  212 (263)
T 3ak4_A          155 -----------------LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQERE----IIWEAE-LRGMTP  212 (263)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHH----HHHHHH-HHTSCH
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhh----cccccc-ccccCc
Confidence                             24579999999999998887764   89999999999998753210    000000 0000  


Q ss_pred             -Cc-ccccccccccccchhhHHHhhhhc
Q 025660          222 -VK-LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 -~~-~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       .. ..+........+.+.+|+|.++.|
T Consensus       213 ~~~~~~~~~~~p~~~~~~~~dvA~~v~~  240 (263)
T 3ak4_A          213 EAVRAEYVSLTPLGRIEEPEDVADVVVF  240 (263)
T ss_dssp             HHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             00 011222344568999999998876

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=5e-26  Score=188.15  Aligned_cols=170  Identities=17%  Similarity=0.176  Sum_probs=130.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cC---CCCCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NL---PGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~---~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++   ...+.++.++.+|++|++++.++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHA--------ERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI   76 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHH
Confidence            467899999999999999999999999999999986        4333321 11   22234688999999999999888


Q ss_pred             Hc-------CCCEEEEccccCCCC---------CCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccce-eec
Q 025660           80 IA-------GCTGVLHVATPVDFE---------DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAA-VFY  139 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~---------~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~-~~~  139 (249)
                      ++       ++|+||||||.....         ..+.++..+++|+.++.++++++.+.   . .++||++||..+ +.+
T Consensus        77 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~  155 (278)
T 1spx_A           77 LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-KGEIVNISSIASGLHA  155 (278)
T ss_dssp             HHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTTSSSSC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEecccccccC
Confidence            87       799999999975431         22234578999999999999887654   2 279999999875 332


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      .+                      +...|+.||...+.+.+.++.+   +|+++++|+||.++++...
T Consensus       156 ~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  201 (278)
T 1spx_A          156 TP----------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGS  201 (278)
T ss_dssp             CT----------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--
T ss_pred             CC----------------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcccc
Confidence            21                      2357999999999999888765   5899999999999998753

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.94  E-value=2.7e-26  Score=191.20  Aligned_cols=169  Identities=23%  Similarity=0.201  Sum_probs=133.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCC-CCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGAS-ERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+ .++.++.+|++|+++++++++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~  111 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP--------RELSSVTAELGELGAGNVIGVRLDVSDPGSCADAAR  111 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHH
Confidence            457999999999999999999999999999999987        333322 2222222 478899999999998888776


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEccccee-eccCCCc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAV-FYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~-~~~~~~~  144 (249)
                             ++|+||||||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..+. .+.+   
T Consensus       112 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~~---  187 (293)
T 3rih_A          112 TVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGYP---  187 (293)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBCT---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCCC---
Confidence                   579999999976441     122335889999999999998874    455 6899999997653 2211   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                         +...|+.||.+.+.+.+.++.+   +|+++++|+||.|++|..
T Consensus       188 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  230 (293)
T 3rih_A          188 -------------------GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGL  230 (293)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred             -------------------CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcch
Confidence                               2457999999999999988776   489999999999999864

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.94  E-value=4.9e-27  Score=194.48  Aligned_cols=178  Identities=18%  Similarity=0.189  Sum_probs=136.4

Q ss_pred             eEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +||||||+||||++++++|+++  |++|++++|++        ++...+..     .+++++.+|++|++++.++++++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~--------~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNP--------AKAQALAA-----QGITVRQADYGDEAALTSALQGVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCT--------TTCHHHHH-----TTCEEEECCTTCHHHHHHHTTTCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcCh--------Hhhhhhhc-----CCCeEEEcCCCCHHHHHHHHhCCC
Confidence            5899999999999999999998  99999999987        33333322     257889999999999999999999


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCC
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (249)
                      +|||+|+...           ..|+.++++++++|++.+ +++||++||..++   ..                      
T Consensus        68 ~vi~~a~~~~-----------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~---~~----------------------  110 (286)
T 2zcu_A           68 KLLLISSSEV-----------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD---TS----------------------  110 (286)
T ss_dssp             EEEECC-------------------CHHHHHHHHHHHHT-CCEEEEEEETTTT---TC----------------------
T ss_pred             EEEEeCCCCc-----------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC---CC----------------------
Confidence            9999999521           147889999999999988 8999999998753   00                      


Q ss_pred             CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhh
Q 025660          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFA  244 (249)
Q Consensus       165 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a  244 (249)
                      ...|+.+|..+|.+++.    ++++++++||+.++++..     .   .+.+...++. +.+..+++.++|+|++|+|++
T Consensus       111 ~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~-----~---~~~~~~~~~~-~~~~~~~~~~~~i~~~Dva~~  177 (286)
T 2zcu_A          111 PLGLADEHIETEKMLAD----SGIVYTLLRNGWYSENYL-----A---SAPAALEHGV-FIGAAGDGKIASATRADYAAA  177 (286)
T ss_dssp             CSTTHHHHHHHHHHHHH----HCSEEEEEEECCBHHHHH-----T---THHHHHHHTE-EEESCTTCCBCCBCHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHH----cCCCeEEEeChHHhhhhH-----H---HhHHhhcCCc-eeccCCCCccccccHHHHHHH
Confidence            13599999999998865    589999999988766532     1   2223333333 335667788999999999999


Q ss_pred             hhc
Q 025660          245 FAF  247 (249)
Q Consensus       245 ~~~  247 (249)
                      +++
T Consensus       178 ~~~  180 (286)
T 2zcu_A          178 AAR  180 (286)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.94  E-value=5.2e-27  Score=185.01  Aligned_cols=175  Identities=16%  Similarity=0.130  Sum_probs=137.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   82 (249)
                      +|++|||||+|+||++++++|+ +|++|++++|+.        +                .+.+|++++++++++++.  
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~--------~----------------~~~~D~~~~~~~~~~~~~~~   57 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHS--------G----------------DVTVDITNIDSIKKMYEQVG   57 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSS--------S----------------SEECCTTCHHHHHHHHHHHC
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCc--------c----------------ceeeecCCHHHHHHHHHHhC
Confidence            3479999999999999999999 999999999987        1                478999999999998875  


Q ss_pred             -CCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCCCCCch
Q 025660           83 -CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (249)
Q Consensus        83 -~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (249)
                       +|+|||+||.....     ..+.++..+++|+.++.++++++.+.- ..++||++||..++.+.               
T Consensus        58 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---------------  122 (202)
T 3d7l_A           58 KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI---------------  122 (202)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC---------------
Confidence             89999999975431     112234778999999999999998761 02699999997653221               


Q ss_pred             hHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccccccccc
Q 025660          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRS  233 (249)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (249)
                             .+...|+.+|...|.+++.++.+.  +++++++|||.++++...                     +......+
T Consensus       123 -------~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~---------------------~~~~~~~~  174 (202)
T 3d7l_A          123 -------VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK---------------------LEPFFEGF  174 (202)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH---------------------HGGGSTTC
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh---------------------hhhhcccc
Confidence                   124579999999999999987653  899999999999987421                     11223356


Q ss_pred             ccchhhHHHhhhhc
Q 025660          234 HTLFVYAIAFAFAF  247 (249)
Q Consensus       234 ~~i~v~d~a~a~~~  247 (249)
                      ++++.+|+|+++.+
T Consensus       175 ~~~~~~dva~~~~~  188 (202)
T 3d7l_A          175 LPVPAAKVARAFEK  188 (202)
T ss_dssp             CCBCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH
Confidence            78999999998754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.94  E-value=2.8e-26  Score=187.15  Aligned_cols=201  Identities=15%  Similarity=0.090  Sum_probs=137.3

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   76 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG--------EKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN   76 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG--------GGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH
Confidence            3568999999999999999999999999999999987        433332 2222224578999999999999988887


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|++|||||....     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+.    
T Consensus        77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~----  151 (252)
T 3h7a_A           77 AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGSG----  151 (252)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCTT----
T ss_pred             HHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCCC----
Confidence                  67999999997543     1223335889999999988887764    444 579999999876543321    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcE-EEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDL-VTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~-~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        ...|+.||.+.+.+.+.++.+.   |+++ +++.||.|.++......+...    .      
T Consensus       152 ------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~----~------  203 (252)
T 3h7a_A          152 ------------------FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF----G------  203 (252)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------
T ss_pred             ------------------CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh----h------
Confidence                              4579999999999998887763   7999 899999999886543211110    0      


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        .+....... ++..+|+|.++.|
T Consensus       204 --~~~~~~~~~-~~~pedvA~~~~~  225 (252)
T 3h7a_A          204 --KDALANPDL-LMPPAAVAGAYWQ  225 (252)
T ss_dssp             -------------CCHHHHHHHHHH
T ss_pred             --hhhhcCCcc-CCCHHHHHHHHHH
Confidence              111222334 7888999988876

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.94  E-value=3.1e-26  Score=190.77  Aligned_cols=203  Identities=14%  Similarity=0.131  Sum_probs=150.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchh-hhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-LSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +. .+.+ +.....+.++.++.+|++|+++++++++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  117 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE--------EGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ  117 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------HHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--------hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            457999999999999999999999999999999986        22 2222 1112234578999999999999888876


Q ss_pred             -------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCcccc
Q 025660           82 -------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                             ++|++|||||....      ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+...     
T Consensus       118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  192 (291)
T 3ijr_A          118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET-----  192 (291)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT-----
T ss_pred             HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC-----
Confidence                   68999999997532      1223345899999999999999998752 1469999999887544321     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                       ...|+.||.+.+.+.+.++.+.   |+++++|+||.|++|.......   .....        
T Consensus       193 -----------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~--------  244 (291)
T 3ijr_A          193 -----------------LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD---EKKVS--------  244 (291)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC---HHHHH--------
T ss_pred             -----------------ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC---HHHHH--------
Confidence                             4579999999999999888764   8999999999999985321110   01111        


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .+........+...+|+|.+++|
T Consensus       245 ~~~~~~p~~r~~~p~dvA~~v~~  267 (291)
T 3ijr_A          245 QFGSNVPMQRPGQPYELAPAYVY  267 (291)
T ss_dssp             HTTTTSTTSSCBCGGGTHHHHHH
T ss_pred             HHHccCCCCCCcCHHHHHHHHHH
Confidence            12233344567788888888765

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.94  E-value=1.5e-26  Score=189.62  Aligned_cols=212  Identities=13%  Similarity=0.066  Sum_probs=145.3

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ +++..  .+.++.++.+|++|++++.++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNR--------EKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRL   76 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHH
Confidence            3568999999999999999999999999999999986        333322 11111  122688999999999999888


Q ss_pred             Hc------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           80 IA------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        80 ~~------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      ++      ++|+||||||....     ...+.++..+++|+.++.++.+.+    ++.+ .++||++||..++.+.+   
T Consensus        77 ~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---  152 (260)
T 2z1n_A           77 FEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQ---  152 (260)
T ss_dssp             HHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---
T ss_pred             HHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCC---
Confidence            86      58999999997543     112234588999999986666655    4455 68999999987653321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                         +...|+.||...+.+.+.++.+.   |+++++|+||.++++.......... . .......
T Consensus       153 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~-~~~~~~~  211 (260)
T 2z1n_A          153 -------------------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERA-R-RSGITVE  211 (260)
T ss_dssp             -------------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------
T ss_pred             -------------------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhh-c-ccCCcHH
Confidence                               24579999999999998887764   8999999999999987542100000 0 0000000


Q ss_pred             C-cccccccccccccchhhHHHhhhhc
Q 025660          222 V-KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~-~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      . .-.+........+.+.+|+|.+++|
T Consensus       212 ~~~~~~~~~~p~~r~~~~~dva~~v~~  238 (260)
T 2z1n_A          212 EALKSMASRIPMGRVGKPEELASVVAF  238 (260)
T ss_dssp             --------CCTTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence            0 0011112233457889999998876

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=6.8e-26  Score=185.27  Aligned_cols=202  Identities=12%  Similarity=0.015  Sum_probs=145.1

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +..+...++.    . .++.+|++|++++.++++ 
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~   70 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP--------EGKEVAEAIG----G-AFFQVDLEDERERVRFVEE   70 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--------THHHHHHHHT----C-EEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh--------hHHHHHHHhh----C-CEEEeeCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999999987        3311122221    3 788999999998888776 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+     
T Consensus        71 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----  144 (256)
T 2d1y_A           71 AAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQ-----  144 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCC-----
Confidence                  689999999975431     1123358899999999999887754    34 68999999987643321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||...+.+.+.++.+.   ++++++++||.+.++....       .+.........
T Consensus       145 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~~~~~~~~~~  200 (256)
T 2d1y_A          145 -----------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE-------AIALSPDPERT  200 (256)
T ss_dssp             -----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-------HHC--------
T ss_pred             -----------------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh-------ccccccCCHHH
Confidence                             14579999999999999887763   8999999999998864211       00000000111


Q ss_pred             -ccccccccccccchhhHHHhhhhc
Q 025660          224 -LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 -~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ..+........+++.+|+|.++.|
T Consensus       201 ~~~~~~~~~~~~~~~~~dvA~~~~~  225 (256)
T 2d1y_A          201 RRDWEDLHALRRLGKPEEVAEAVLF  225 (256)
T ss_dssp             CHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             112233345678999999999876

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.94  E-value=1.1e-25  Score=183.29  Aligned_cols=164  Identities=16%  Similarity=0.104  Sum_probs=127.2

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++|++|||||+|+||++++++|+++|++|++++|+.        +.    .   ..  .+..+.+|++|++++.+++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~----~---~~--~~~~~~~D~~d~~~~~~~~   65 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAF--------TQ----E---QY--PFATEVMDVADAAQVAQVC   65 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCC--------CS----S---CC--SSEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCch--------hh----h---cC--CceEEEcCCCCHHHHHHHH
Confidence            444668999999999999999999999999999999987        11    1   11  2678999999999998888


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||.....     ..+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.+   
T Consensus        66 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---  141 (250)
T 2fwm_X           66 QRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRI---  141 (250)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCC---
Confidence            6       689999999975431     12234588999999999988877    3445 68999999987643221   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         +...|+.||...+.+.+.++.+   +|+++++|+||.++++...
T Consensus       142 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  185 (250)
T 2fwm_X          142 -------------------GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQR  185 (250)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccc
Confidence                               2457999999999999988776   3899999999999998743

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.94  E-value=5.8e-26  Score=187.38  Aligned_cols=204  Identities=17%  Similarity=0.110  Sum_probs=143.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHH--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI--   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~--   80 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.+++  
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   91 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE--------KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT   91 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        333322 222122346889999999999988887  


Q ss_pred             ------cCCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           81 ------AGCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        81 ------~~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            .++|+||||||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+    
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----  166 (273)
T 1ae1_A           92 VAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALP----  166 (273)
T ss_dssp             HHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCT----
T ss_pred             HHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCC----
Confidence                  4689999999975431     122345788999999999988774    344 58999999987653321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCc---cHHHHHHHHc
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG---SVRSSLALIL  219 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~---~~~~~~~~~~  219 (249)
                                        +...|+.||.+.+.+.+.++.+.   |+++++|+||.+++|........   ......... 
T Consensus       167 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-  227 (273)
T 1ae1_A          167 ------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI-  227 (273)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH-
T ss_pred             ------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHH-
Confidence                              24579999999999998887764   89999999999999875321110   000111111 


Q ss_pred             CCCcccccccccccccchhhHHHhhhhc
Q 025660          220 GNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                              .......+...+|+|.++.|
T Consensus       228 --------~~~p~~r~~~p~dvA~~v~~  247 (273)
T 1ae1_A          228 --------VKTPMGRAGKPQEVSALIAF  247 (273)
T ss_dssp             --------HHSTTCSCBCHHHHHHHHHH
T ss_pred             --------hcCCCCCCcCHHHHHHHHHH
Confidence                    11223457788999988765

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.94  E-value=5.4e-26  Score=186.41  Aligned_cols=201  Identities=16%  Similarity=0.083  Sum_probs=145.2

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..+++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++   +.++.++.+|++|++++.++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~   76 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPN--------SGGEAQAKKL---GNNCVFAPADVTSEKDVQTA   76 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT--------SSHHHHHHHH---CTTEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc--------HhHHHHHHHh---CCceEEEEcCCCCHHHHHHH
Confidence            334568999999999999999999999999999999987        333322 222   23688999999999999888


Q ss_pred             Hc-------CCCEEEEccccCCCC-----------CCChHHHhhhhHHhHHHHHHHHHHhc----------CCcceEEEE
Q 025660           80 IA-------GCTGVLHVATPVDFE-----------DKEPEEVITQRAINGTLGILKSCLKS----------GTVKRVVYT  131 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----------~~~~~~~~~~~n~~~t~~l~~~~~~~----------~~~~~~v~~  131 (249)
                      ++       ++|+||||||.....           ..+.++..+++|+.++.++++++.+.          + .++||++
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~i  155 (265)
T 2o23_A           77 LALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINT  155 (265)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEE
T ss_pred             HHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEe
Confidence            87       799999999975431           11223478999999999999988754          3 5799999


Q ss_pred             cccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCC
Q 025660          132 SSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA  208 (249)
Q Consensus       132 SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~  208 (249)
                      ||..++.+.+                      +...|+.||.+.+.+.+.++.+   .++++++|+||.+.++.......
T Consensus       156 sS~~~~~~~~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  213 (265)
T 2o23_A          156 ASVAAFEGQV----------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE  213 (265)
T ss_dssp             CCTHHHHCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------
T ss_pred             CChhhcCCCC----------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH
Confidence            9987653321                      2457999999999888887766   48999999999999986432111


Q ss_pred             ccHHHHHHHHcCCCcccccccccc-cccchhhHHHhhhhc
Q 025660          209 GSVRSSLALILGNVKLKICCVMNR-SHTLFVYAIAFAFAF  247 (249)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~d~a~a~~~  247 (249)
                      .    .....        ...... ..++..+|+|.++.|
T Consensus       214 ~----~~~~~--------~~~~~~~~~~~~~~dva~~~~~  241 (265)
T 2o23_A          214 K----VCNFL--------ASQVPFPSRLGDPAEYAHLVQA  241 (265)
T ss_dssp             -------CHH--------HHTCSSSCSCBCHHHHHHHHHH
T ss_pred             H----HHHHH--------HHcCCCcCCCCCHHHHHHHHHH
Confidence            0    00000        011111 347788999988765

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.5e-25  Score=185.80  Aligned_cols=210  Identities=14%  Similarity=0.025  Sum_probs=150.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   98 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTR--------TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRD   98 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999987        444333 3333445678999999999998888876 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|++|||||....      ...+.++..+++|+.++.++++++    ++.+ .++||++||..++.....   
T Consensus        99 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~---  174 (283)
T 3v8b_A           99 LVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTT---  174 (283)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCS---
T ss_pred             HHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCC---
Confidence                  68999999997532      112233588999999999988887    4455 689999999775431111   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                       .+...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++..........    .. ....
T Consensus       175 -----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~----~~-~~~~  232 (283)
T 3v8b_A          175 -----------------PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE----EE-TAIP  232 (283)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH----HH-HSCC
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc----hh-hhhh
Confidence                             12457999999999999998887   47999999999999987643211110    00 0000


Q ss_pred             cccccccccc--cccchhhHHHhhhhc
Q 025660          223 KLKICCVMNR--SHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~--~~~i~v~d~a~a~~~  247 (249)
                      ...+......  ..+...+|+|.+++|
T Consensus       233 ~~~~~~~~p~~~~r~~~pedvA~~v~f  259 (283)
T 3v8b_A          233 VEWPKGQVPITDGQPGRSEDVAELIRF  259 (283)
T ss_dssp             CBCTTCSCGGGTTCCBCHHHHHHHHHH
T ss_pred             hhhhhhcCccccCCCCCHHHHHHHHHH
Confidence            0011111222  456778899998876

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.94  E-value=8e-26  Score=183.96  Aligned_cols=198  Identities=16%  Similarity=0.132  Sum_probs=143.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++++||||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..  ..++.++.+|+++.+++.++++  
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   82 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE--------EKLKSLGNAL--KDNYTIEVCNLANKEECSNLISKT   82 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH--CSSEEEEECCTTSHHHHHHHHHTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHh--ccCccEEEcCCCCHHHHHHHHHhc
Confidence            568999999999999999999999999999999987        5544443221  1368899999999999999987  


Q ss_pred             -CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccccCCC
Q 025660           82 -GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 -~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                       ++|+||||||....      ..+++ +..+++|+.++.++++++.+    .+ .++||++||..++.+.+         
T Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  151 (249)
T 3f9i_A           83 SNLDILVCNAGITSDTLAIRMKDQDF-DKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNP---------  151 (249)
T ss_dssp             SCCSEEEECCC-------------CH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCS---------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCC---------
Confidence             58999999997543      23344 48999999999998887643    44 57999999988754432         


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccc
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKIC  227 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (249)
                                   +...|+.||.+.+.+.+.++.+   +++++++++||.|.++.......    ....        .+.
T Consensus       152 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~--------~~~  206 (249)
T 3f9i_A          152 -------------GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE----KQRE--------AIV  206 (249)
T ss_dssp             -------------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH----HHHH--------HHH
T ss_pred             -------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH----HHHH--------HHH
Confidence                         2457999999999999888776   48999999999999987543211    1111        112


Q ss_pred             ccccccccchhhHHHhhhhc
Q 025660          228 CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       228 ~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .......+.+.+|+|.++.|
T Consensus       207 ~~~~~~~~~~~~dva~~~~~  226 (249)
T 3f9i_A          207 QKIPLGTYGIPEDVAYAVAF  226 (249)
T ss_dssp             HHCTTCSCBCHHHHHHHHHH
T ss_pred             hcCCCCCCcCHHHHHHHHHH
Confidence            23345678889999988765

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.94  E-value=8.1e-26  Score=187.64  Aligned_cols=182  Identities=14%  Similarity=0.116  Sum_probs=135.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      |+||||||||+||++++++|.++ |++|++++|++        ++...+..     .+++++.+|++|++++.++++++|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~--------~~~~~~~~-----~~v~~~~~D~~d~~~l~~~~~~~d   67 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNV--------EKVPDDWR-----GKVSVRQLDYFNQESMVEAFKGMD   67 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSG--------GGSCGGGB-----TTBEEEECCTTCHHHHHHHTTTCS
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCH--------HHHHHhhh-----CCCEEEEcCCCCHHHHHHHHhCCC
Confidence            36999999999999999999998 99999999987        33333322     368999999999999999999999


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCC
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (249)
                      +|||+|+....         ...|+.++++++++|++.+ +++||++||...   . .       ..+            
T Consensus        68 ~vi~~a~~~~~---------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~---~-~-------~~~------------  114 (289)
T 3e48_A           68 TVVFIPSIIHP---------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYAD---Q-H-------NNP------------  114 (289)
T ss_dssp             EEEECCCCCCS---------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESCC---S-T-------TCC------------
T ss_pred             EEEEeCCCCcc---------chhhHHHHHHHHHHHHHcC-CCEEEEEcccCC---C-C-------CCC------------
Confidence            99999997432         1347899999999999998 899999999432   1 0       111            


Q ss_pred             CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhh
Q 025660          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFA  244 (249)
Q Consensus       165 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a  244 (249)
                       ..+...+..+|..+.    ..+++++++||+.++|+..        ..+......+ ...+..++..++|++++|+|++
T Consensus       115 -~~~~~~~~~~e~~~~----~~g~~~~ilrp~~~~~~~~--------~~~~~~~~~~-~~~~~~g~~~~~~i~~~Dva~~  180 (289)
T 3e48_A          115 -FHMSPYFGYASRLLS----TSGIDYTYVRMAMYMDPLK--------PYLPELMNMH-KLIYPAGDGRINYITRNDIARG  180 (289)
T ss_dssp             -STTHHHHHHHHHHHH----HHCCEEEEEEECEESTTHH--------HHHHHHHHHT-EECCCCTTCEEEEECHHHHHHH
T ss_pred             -CccchhHHHHHHHHH----HcCCCEEEEeccccccccH--------HHHHHHHHCC-CEecCCCCceeeeEEHHHHHHH
Confidence             011112223343333    3699999999999999732        2333333333 2334567888999999999999


Q ss_pred             hhc
Q 025660          245 FAF  247 (249)
Q Consensus       245 ~~~  247 (249)
                      +++
T Consensus       181 ~~~  183 (289)
T 3e48_A          181 VIA  183 (289)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.94  E-value=3.9e-26  Score=192.82  Aligned_cols=178  Identities=17%  Similarity=0.204  Sum_probs=130.5

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC-CCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+.++|++|||||+|+||++++++|+++|++|++++|+...   +..++.+.+... ...+.++.++.+|++|++++.++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~---r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~   77 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVG---RNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRA   77 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTT---TTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccc---cCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            66667899999999999999999999999999999997411   122233332211 11234689999999999999888


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|+||||||....     ...+.++..+++|+.|+.++++++    ++.+ .++||++||..++..... 
T Consensus        78 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~-  155 (324)
T 3u9l_A           78 IDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPP-  155 (324)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCS-
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCC-
Confidence            87       79999999997543     122333478999999999998888    4555 689999999876432211 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                          ....|+.||.+.+.+.+.++.+   +|+++++|+||.+.++..
T Consensus       156 --------------------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          156 --------------------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             --------------------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             --------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence                                1357999999999999988776   589999999999987754

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.94  E-value=1.8e-26  Score=188.21  Aligned_cols=170  Identities=18%  Similarity=0.154  Sum_probs=119.5

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..+++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|++++.++
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINA--------EAAEAVAKQIVADGGTAISVAVDVSDPESAKAM   76 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            455678999999999999999999999999999999987        443332 22222345788999999999998888


Q ss_pred             Hc-------CCCEEEEccccCCC--------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeecc
Q 025660           80 IA-------GCTGVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~--------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~  140 (249)
                      ++       ++|+||||||....        ...+.++..+++|+.++.++++.+    ++.+ .++||++||..++.  
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--  153 (253)
T 3qiv_A           77 ADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWL--  153 (253)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC-------
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccC--
Confidence            76       78999999997321        122333588999999966655554    4555 67999999987641  


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                             +...|+.||.+.+.+.+.++.+.   ++++++++||.++++...
T Consensus       154 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  197 (253)
T 3qiv_A          154 -----------------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANR  197 (253)
T ss_dssp             -----------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------
T ss_pred             -----------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchh
Confidence                                   12469999999999999988875   799999999999998654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.94  E-value=3.5e-26  Score=187.38  Aligned_cols=211  Identities=13%  Similarity=0.081  Sum_probs=144.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchh-hhhhc-cCCCC-CCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-LSFLK-NLPGA-SERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +. .+.+. ++... +.++.++.+|++|++++.+++
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   74 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD--------AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV   74 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC--------HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc--------chHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHH
Confidence            567999999999999999999999999999999987        33 33221 11111 236788999999999988887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+   
T Consensus        75 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---  150 (260)
T 1x1t_A           75 DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASA---  150 (260)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCC---
Confidence            6       68999999997543     12233458899999999988887753    44 58999999987653321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                         +...|+.||...+.+.+.++.+.   |+++++|+||.+.+|.............  .....
T Consensus       151 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~  209 (260)
T 1x1t_A          151 -------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKN--GVDQE  209 (260)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhcccc--CCchH
Confidence                               24579999999999999887764   8999999999999987543211000000  00000


Q ss_pred             Cc-ccc-cccccccccchhhHHHhhhhc
Q 025660          222 VK-LKI-CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~-~~~-~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .. -.+ ........+.+.+|+|.+++|
T Consensus       210 ~~~~~~~~~~~p~~~~~~p~dva~~~~~  237 (260)
T 1x1t_A          210 TAARELLSEKQPSLQFVTPEQLGGTAVF  237 (260)
T ss_dssp             -----CHHHHCTTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHhhccCCCCCCcCHHHHHHHHHH
Confidence            00 011 122234568899999998876

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.94  E-value=1.6e-25  Score=182.85  Aligned_cols=199  Identities=16%  Similarity=0.056  Sum_probs=144.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..  +.++.++.+|++|++++.++++  
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   73 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD--------EEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999987        4444332221  2367889999999999988877  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHH----HHHHHhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGI----LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l----~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++    ++.+++.+ .++||++||..++.+.+      
T Consensus        74 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  146 (254)
T 1hdc_A           74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLA------  146 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC------
Confidence                 79999999997543     11223458899999998754    44555555 68999999987653321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                      +...|+.||...+.+.+.++.+   +++++++|+||.++++....            ......-
T Consensus       147 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------~~~~~~~  198 (254)
T 1hdc_A          147 ----------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE------------TGIRQGE  198 (254)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH------------HTCCCST
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc------------cchhHHH
Confidence                            2457999999999999888776   38999999999999874211            0000000


Q ss_pred             cccccccccccc-hhhHHHhhhhc
Q 025660          225 KICCVMNRSHTL-FVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i-~v~d~a~a~~~  247 (249)
                      .+........+. +.+|+|.++.|
T Consensus       199 ~~~~~~p~~~~~~~~~dvA~~v~~  222 (254)
T 1hdc_A          199 GNYPNTPMGRVGNEPGEIAGAVVK  222 (254)
T ss_dssp             TSCTTSTTSSCB-CHHHHHHHHHH
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHH
Confidence            111112233467 88999988765

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.94  E-value=5.6e-26  Score=189.89  Aligned_cols=204  Identities=15%  Similarity=0.080  Sum_probs=144.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCC-CCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGA-SERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++... +.++.++.+|++|++++.++++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~   96 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM--------DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS   96 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHH
Confidence            457899999999999999999999999999999986        333322 111111 2468899999999999888876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|+||||||....     ...+.++..+++|+.++.++++.+.+.    ...++||++||..++.+..    
T Consensus        97 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----  172 (302)
T 1w6u_A           97 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG----  172 (302)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC----
Confidence                   36999999996432     112233488999999999988877542    2257999999987643321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCC-CCccHHHHHHHHcCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPK-FAGSVRSSLALILGN  221 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~-~~~~~~~~~~~~~~~  221 (249)
                                        +...|+.||.+.+.+.+.++.+   +|++++++|||.+++++.... .+...  ........
T Consensus       173 ------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~  232 (302)
T 1w6u_A          173 ------------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT--FEKEMIGR  232 (302)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH--HHHHHHTT
T ss_pred             ------------------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh--hHHHHHhc
Confidence                              2457999999999999998877   689999999999999843221 11111  11111111


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                              .....+.+.+|+|.++.|
T Consensus       233 --------~p~~~~~~~~dva~~~~~  250 (302)
T 1w6u_A          233 --------IPCGRLGTVEELANLAAF  250 (302)
T ss_dssp             --------CTTSSCBCHHHHHHHHHH
T ss_pred             --------CCcCCCCCHHHHHHHHHH
Confidence                    122357889999998865

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.94  E-value=4.9e-26  Score=185.03  Aligned_cols=201  Identities=14%  Similarity=0.109  Sum_probs=144.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEc-CCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR-SELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++| +.        ++.+.+ +++...+.++.++.+|++|++++.++++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNE--------QKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVK   74 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            4679999999999999999999999999999999 44        333222 1211123468899999999999888876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|+||||||....     ...+.++..+++|+.++.++++.+    ++.+ .++||++||..++.+.+    
T Consensus        75 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----  149 (246)
T 2uvd_A           75 QTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNP----  149 (246)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCC----
Confidence                   68999999997543     122333588999999977666655    4455 68999999987654321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||...+.+.+.++.+   +|+++++|+||.+.++............+   .    
T Consensus       150 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~----  204 (246)
T 2uvd_A          150 ------------------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEM---L----  204 (246)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHH---H----
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHH---H----
Confidence                              1357999999999888877665   48999999999999886543211111111   1    


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           .......+++.+|+|.++.|
T Consensus       205 -----~~~p~~~~~~~~dvA~~~~~  224 (246)
T 2uvd_A          205 -----KLIPAAQFGEAQDIANAVTF  224 (246)
T ss_dssp             -----HTCTTCSCBCHHHHHHHHHH
T ss_pred             -----hcCCCCCCcCHHHHHHHHHH
Confidence                 11122357889999988765

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.94  E-value=1.4e-26  Score=187.64  Aligned_cols=200  Identities=16%  Similarity=0.152  Sum_probs=142.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEE-EcCCCCcccCCchhhhhh-ccCCCCCCCeEE-EEcCCCChhhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFL-KNLPGASERLRI-FHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~   81 (249)
                      +|++|||||+|+||++++++|+++|++|+++ +|+.        ++.+.+ .++...+.++.. +.+|++|++++.++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNR--------EKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVH   72 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCH--------HHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Confidence            3689999999999999999999999999998 6765        333322 111112235566 8999999998888865


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|+|||+||....     ...+.++..+++|+.++.++++    .+++.+ .++||++||..++.+.+    
T Consensus        73 ~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----  147 (245)
T 2ph3_A           73 QAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNP----  147 (245)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCS----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCC----
Confidence                   68999999997543     1122334789999999555554    555556 68999999987654321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||.+.+.+.+.++.+.   +++++++|||.++++..... .   .........  
T Consensus       148 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~--  203 (245)
T 2ph3_A          148 ------------------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL-P---QEVKEAYLK--  203 (245)
T ss_dssp             ------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-C---HHHHHHHHH--
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc-C---HHHHHHHHh--
Confidence                              13579999999999998887764   89999999999999864321 1   111111111  


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ......+++.+|+|.++.|
T Consensus       204 ------~~~~~~~~~~~dva~~~~~  222 (245)
T 2ph3_A          204 ------QIPAGRFGRPEEVAEAVAF  222 (245)
T ss_dssp             ------TCTTCSCBCHHHHHHHHHH
T ss_pred             ------cCCCCCCcCHHHHHHHHHH
Confidence                  1123468899999998865

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.94  E-value=1.5e-26  Score=191.59  Aligned_cols=204  Identities=21%  Similarity=0.197  Sum_probs=147.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.    +........++.++.+|++|++++.++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~   81 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNP--------DKLAGAVQELEALGANGGAIRYEPTDITNEDETARA   81 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence            568999999999999999999999999999999986        33322    222222223788999999999998888


Q ss_pred             Hc-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|+||||||....      ...+.++..+++|+.++.++++++.+.   ...++||++||..++.+..  
T Consensus        82 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  159 (281)
T 3svt_A           82 VDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR--  159 (281)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT--
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC--
Confidence            76       57999999997322      122333488999999999999877643   1146999999987654321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+.   ++++++|+||.|+++........ . ....    
T Consensus       160 --------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~-~~~~----  213 (281)
T 3svt_A          160 --------------------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES-A-ELSS----  213 (281)
T ss_dssp             --------------------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-H-HHHH----
T ss_pred             --------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC-H-HHHH----
Confidence                                24579999999999999888764   69999999999999864321000 0 0111    


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                          .+........+.+.+|+|.++.|
T Consensus       214 ----~~~~~~p~~r~~~~~dva~~~~~  236 (281)
T 3svt_A          214 ----DYAMCTPLPRQGEVEDVANMAMF  236 (281)
T ss_dssp             ----HHHHHCSSSSCBCHHHHHHHHHH
T ss_pred             ----HHHhcCCCCCCCCHHHHHHHHHH
Confidence                11222334566778888888765

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.94  E-value=1.7e-26  Score=189.99  Aligned_cols=199  Identities=15%  Similarity=0.127  Sum_probs=142.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+.  .+.++.++.+|++|++++.++++  
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE--------DKLKEIAAD--LGKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHH--HCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHH--hCCceEEEEeecCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999987        444443221  13468899999999999888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++.+.+    ++.+ .++||++||..++.+.+      
T Consensus        96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~------  168 (266)
T 3grp_A           96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNP------  168 (266)
T ss_dssp             HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCC------
Confidence                 68999999997643     111233488999999966666555    4455 67999999987654432      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                      +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++......    .......      
T Consensus       169 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~------  222 (266)
T 3grp_A          169 ----------------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN----EKQKEAI------  222 (266)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC----HHHHHHH------
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC----HHHHHHH------
Confidence                            1357999999999888888776   3899999999999988643221    1112211      


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ........+...+|+|.+++|
T Consensus       223 --~~~~p~~r~~~~edvA~~v~~  243 (266)
T 3grp_A          223 --MAMIPMKRMGIGEEIAFATVY  243 (266)
T ss_dssp             --HTTCTTCSCBCHHHHHHHHHH
T ss_pred             --HhcCCCCCCcCHHHHHHHHHH
Confidence              122334566778899888765

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.94  E-value=3e-26  Score=189.53  Aligned_cols=223  Identities=16%  Similarity=0.104  Sum_probs=153.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcc----cCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE----HRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.....    ....+..+.+ ..+...+.++.++.+|++|++++.+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            4689999999999999999999999999999998731000    0011222221 1122224578999999999999988


Q ss_pred             HHc-------CCCEEEEccccCCCC-CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           79 AIA-------GCTGVLHVATPVDFE-DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~-~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      +++       ++|+||||||..... ..+.++..+++|+.++.++++++.+    .+..++||++||..++.+....   
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  168 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA---  168 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS---
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC---
Confidence            886       689999999986542 2233458999999999999888754    2224799999998765432110   


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHc-CCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL-GNV  222 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~-~~~  222 (249)
                          .           .+...|+.||.+.+.+.+.++.+.   |+++++|+||.|.+|......  ....+..... ...
T Consensus       169 ----~-----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~  231 (278)
T 3sx2_A          169 ----D-----------PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEF--TREWLAKMAAATDT  231 (278)
T ss_dssp             ----S-----------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHH--HHHHHHHHHHHCC-
T ss_pred             ----C-----------CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhh--HHHHHhhccchhhh
Confidence                0           013579999999999999887764   799999999999999764320  0111111111 111


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ...+..... ..+...+|+|.++.|
T Consensus       232 ~~~~~~~~p-~~~~~p~dvA~~v~~  255 (278)
T 3sx2_A          232 PGAMGNAMP-VEVLAPEDVANAVAW  255 (278)
T ss_dssp             -CTTSCSSS-CSSBCHHHHHHHHHH
T ss_pred             hhhhhhhcC-cCcCCHHHHHHHHHH
Confidence            112233333 678899999999876

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.94  E-value=2.9e-26  Score=186.55  Aligned_cols=201  Identities=15%  Similarity=0.122  Sum_probs=144.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++.. ..++.++.+|++|++++.++++ 
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   75 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS--------DVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDA   75 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhhc-cCceEEEECCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999986        333332 22211 1468899999999999888876 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCc-ceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTV-KRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~-~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|+||||||.....     ..+.++..+++|+.++.++.+.+    ++.+ . ++||++||..++.+.+    
T Consensus        76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~----  150 (251)
T 1zk4_A           76 TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGDP----  150 (251)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCCT----
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCCC----
Confidence                  489999999975431     11233478999999877766655    4444 4 7999999987653321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHH-----HcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE-----EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-----~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                        +...|+.||...+.+.+.++.     .++++++++|||.++++..... +.  ......   
T Consensus       151 ------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~--~~~~~~---  206 (251)
T 1zk4_A          151 ------------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PG--AEEAMS---  206 (251)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TT--HHHHHT---
T ss_pred             ------------------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cc--hhhhHH---
Confidence                              245799999999999887765     3589999999999999864321 11  011110   


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           +........+++.+|+|.++.|
T Consensus       207 -----~~~~~~~~~~~~~~dva~~~~~  228 (251)
T 1zk4_A          207 -----QRTKTPMGHIGEPNDIAYICVY  228 (251)
T ss_dssp             -----STTTCTTSSCBCHHHHHHHHHH
T ss_pred             -----HhhcCCCCCCcCHHHHHHHHHH
Confidence                 1111223468899999998865

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.94  E-value=5.3e-26  Score=188.32  Aligned_cols=206  Identities=17%  Similarity=0.126  Sum_probs=150.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   78 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNG--------NALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL   78 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCH--------HHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999987        444333 3333345678899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|++|||||....      ...+.++..+++|+.++.++++++.+    .+ .++||++||..++....    
T Consensus        79 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----  153 (280)
T 3tox_A           79 AVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGF----  153 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCC----
Confidence                  68999999997532      12233458899999999998887754    34 57999999987641110    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                       .+...|+.||.+.+.+.+.++.+.   |+++++|+||.|.+|......+............  
T Consensus       154 -----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--  214 (280)
T 3tox_A          154 -----------------AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEG--  214 (280)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHT--
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhc--
Confidence                             124579999999999998887764   8999999999999997543211111112222222  


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ......+...+|+|.++.|
T Consensus       215 ------~~p~~r~~~pedvA~~v~~  233 (280)
T 3tox_A          215 ------LHALKRIARPEEIAEAALY  233 (280)
T ss_dssp             ------TSTTSSCBCHHHHHHHHHH
T ss_pred             ------cCccCCCcCHHHHHHHHHH
Confidence                  2233457788899888766

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.94  E-value=4.1e-26  Score=186.81  Aligned_cols=203  Identities=13%  Similarity=0.073  Sum_probs=148.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEE-EcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|+++ +|+.        +..+.+ .++...+.++.++.+|++|+++++++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK--------KAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQ   74 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            56899999999999999999999999999987 6665        333322 2222334578999999999999888876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|+||||||....     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+    
T Consensus        75 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----  149 (258)
T 3oid_A           75 QIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLE----  149 (258)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCC----
Confidence                   46999999996443     1223334789999999999888774    344 57999999987643321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||.+.+.+.+.++.+.   ++++++|+||.+.++....... . ......     
T Consensus       150 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~-~~~~~~-----  204 (258)
T 3oid_A          150 ------------------NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-R-EDLLED-----  204 (258)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-H-HHHHHH-----
T ss_pred             ------------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-C-HHHHHH-----
Confidence                              24679999999999999988874   7999999999999986543211 1 111111     


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         +........+...+|+|.++.|
T Consensus       205 ---~~~~~p~~r~~~~~dva~~v~~  226 (258)
T 3oid_A          205 ---ARQNTPAGRMVEIKDMVDTVEF  226 (258)
T ss_dssp             ---HHHHCTTSSCBCHHHHHHHHHH
T ss_pred             ---HHhcCCCCCCcCHHHHHHHHHH
Confidence               1122334567888999998876

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.94  E-value=4.3e-26  Score=188.78  Aligned_cols=205  Identities=18%  Similarity=0.130  Sum_probs=149.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   94 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDA--------KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA   94 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999987        443332 2233334578999999999998888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh------cCCcceEEEEcccceeeccCCCc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK------SGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~------~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++++.+      .+ .++||++||..++.+.+   
T Consensus        95 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~---  170 (279)
T 3sju_A           95 AVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVM---  170 (279)
T ss_dssp             HHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCT---
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCC---
Confidence                  58999999997643     12233357899999999999998755      34 57999999987643321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCC---C---c-cHHHH
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF---A---G-SVRSS  214 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~---~---~-~~~~~  214 (249)
                                         +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++......   .   . .....
T Consensus       171 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  231 (279)
T 3sju_A          171 -------------------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEV  231 (279)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHH
T ss_pred             -------------------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHH
Confidence                               2457999999999999988877   4899999999999887532100   0   0 00111


Q ss_pred             HHHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          215 LALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ...        +........+...+|+|.++.|
T Consensus       232 ~~~--------~~~~~p~~r~~~pedvA~~v~~  256 (279)
T 3sju_A          232 HER--------FNAKIPLGRYSTPEEVAGLVGY  256 (279)
T ss_dssp             HHH--------HHTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHH--------HHhcCCCCCCCCHHHHHHHHHH
Confidence            111        1223344567889999998876

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.94  E-value=5.7e-26  Score=187.74  Aligned_cols=204  Identities=17%  Similarity=0.079  Sum_probs=145.3

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ +++...+ ++.++.+|++|++++.++++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~   97 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDA--------EACADTATRLSAYG-DCQAIPADLSSEAGARRLAQ   97 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHH
Confidence            3457899999999999999999999999999999986        433322 2222222 67889999999999888876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCC---cceEEEEcccceeeccCC
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGT---VKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~---~~~~v~~SS~~~~~~~~~  142 (249)
                             ++|+||||||....     ...+.++..+++|+.++.++++++.    +.+.   .++||++||..++.+.+.
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~  177 (276)
T 2b4q_A           98 ALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE  177 (276)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC
Confidence                   68999999997543     1223345889999999987777664    3341   279999999876433211


Q ss_pred             CccccCCCCCCchhHhhhcCCCCc-hHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHH
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGK-SYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~  218 (249)
                                            .. .|+.||.+.+.+.+.++.+   +++++++|+||.+.++........    .....
T Consensus       178 ----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~  231 (276)
T 2b4q_A          178 ----------------------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND----PQALE  231 (276)
T ss_dssp             ----------------------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC----HHHHH
T ss_pred             ----------------------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh----HHHHH
Confidence                                  23 6999999999999988776   389999999999998864211000    00111


Q ss_pred             cCCCcccccccccccccchhhHHHhhhhc
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ...      .......+...+|+|.+++|
T Consensus       232 ~~~------~~~p~~r~~~p~dvA~~v~~  254 (276)
T 2b4q_A          232 ADS------ASIPMGRWGRPEEMAALAIS  254 (276)
T ss_dssp             HHH------HTSTTSSCCCHHHHHHHHHH
T ss_pred             Hhh------cCCCCCCcCCHHHHHHHHHH
Confidence            000      01223457889999998876

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=7.8e-26  Score=183.35  Aligned_cols=191  Identities=14%  Similarity=0.092  Sum_probs=145.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGF   76 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~   76 (249)
                      +|++|||||+|+||++++++|+++|+       +|++++|+.        +..+.+. ++...+.++.++.+|++|++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   73 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA--------ADLEKISLECRAEGALTDTITADISDMADV   73 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH--------HHHHHHHHHHHTTTCEEEEEECCTTSHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH--------HHHHHHHHHHHccCCeeeEEEecCCCHHHH
Confidence            56899999999999999999999999       999999986        4433332 2222234688999999999998


Q ss_pred             HHHHc-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeecc
Q 025660           77 DAAIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        77 ~~~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~  140 (249)
                      .++++       ++|+||||||.....     ..+.++..+++|+.++.++++.+.+    .+ .++||++||..++.+.
T Consensus        74 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~  152 (244)
T 2bd0_A           74 RRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF  152 (244)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCC
Confidence            88876       689999999975431     1223347899999999998888753    34 6899999998764322


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHH
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~  217 (249)
                      +                      +...|+.||.+.+.+.+.++.+   ++++++++|||.++||.......         
T Consensus       153 ~----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------  201 (244)
T 2bd0_A          153 R----------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---------  201 (244)
T ss_dssp             T----------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---------
T ss_pred             C----------------------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc---------
Confidence            1                      2467999999999999887664   48999999999999997543110         


Q ss_pred             HcCCCcccccccccccccchhhHHHhhhhc
Q 025660          218 ILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                          ..        ...+++.+|+|.++.|
T Consensus       202 ----~~--------~~~~~~~~dva~~~~~  219 (244)
T 2bd0_A          202 ----EM--------QALMMMPEDIAAPVVQ  219 (244)
T ss_dssp             ----TT--------GGGSBCHHHHHHHHHH
T ss_pred             ----cc--------cccCCCHHHHHHHHHH
Confidence                00        1257888999888765

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.94  E-value=1.3e-25  Score=182.85  Aligned_cols=202  Identities=15%  Similarity=0.147  Sum_probs=140.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..      ....+.+.+.   +.++.++.+|++|++++.++++  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~   76 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA------PEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQV   76 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC------HHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch------hHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999761      0111122222   3468899999999999888864  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHH----HHhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.+++++    +++.+ .++||++||..++.+.+      
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  149 (249)
T 2ew8_A           77 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIE------  149 (249)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCS------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCC------
Confidence                 68999999997543     11223347899999998777776    45555 68999999987653321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                      +...|+.||...+.+.+.++.+   +|+++++|+||.+.++........   ......   ..+
T Consensus       150 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~---~~~  207 (249)
T 2ew8_A          150 ----------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS---AMFDVL---PNM  207 (249)
T ss_dssp             ----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------------CT
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcccc---chhhHH---HHh
Confidence                            2457999999999999988776   389999999999999864311000   000000   001


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        .  .....+.+.+|+|.++.|
T Consensus       208 --~--~~~~~~~~p~dva~~~~~  226 (249)
T 2ew8_A          208 --L--QAIPRLQVPLDLTGAAAF  226 (249)
T ss_dssp             --T--SSSCSCCCTHHHHHHHHH
T ss_pred             --h--CccCCCCCHHHHHHHHHH
Confidence              0  233467889999998876

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.94  E-value=5.3e-26  Score=186.28  Aligned_cols=207  Identities=16%  Similarity=0.060  Sum_probs=142.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..+++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+....  ..++.++.+|++|.+++++++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   74 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK--------AGAERVAGEI--GDAALAVAADISKEADVDAAV   74 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH--CTTEEEEECCTTSHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHh--CCceEEEEecCCCHHHHHHHH
Confidence            455678999999999999999999999999999999987        5544443211  246889999999999988887


Q ss_pred             c-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhcC-------CcceEEEEcccceeecc
Q 025660           81 A-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-------TVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-------~~~~~v~~SS~~~~~~~  140 (249)
                      +       ++|+||||||....      ...+.++..+++|+.++.++++.+.+.-       ...+||++||..++.+.
T Consensus        75 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  154 (261)
T 3n74_A           75 EAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR  154 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC
T ss_pred             HHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC
Confidence            6       68999999997642      1223334789999999888888775421       13479999998764332


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHH
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~  217 (249)
                      +                      ....|+.||.+.+.+.+.++.+   +++++++++||.+.++.............   
T Consensus       155 ~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~---  209 (261)
T 3n74_A          155 P----------------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEI---  209 (261)
T ss_dssp             T----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------
T ss_pred             C----------------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHH---
Confidence            1                      1356999999999999988877   48999999999999987543211100000   


Q ss_pred             HcCCCcccccccccccccchhhHHHhhhhc
Q 025660          218 ILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           .-.+........++..+|+|.++.|
T Consensus       210 -----~~~~~~~~~~~~~~~~~dva~~~~~  234 (261)
T 3n74_A          210 -----RKKFRDSIPMGRLLKPDDLAEAAAF  234 (261)
T ss_dssp             ------------CTTSSCCCHHHHHHHHHH
T ss_pred             -----HHHHhhcCCcCCCcCHHHHHHHHHH
Confidence                 1122333445678899999998876

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.94  E-value=7e-26  Score=186.54  Aligned_cols=197  Identities=15%  Similarity=0.096  Sum_probs=146.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|+||||||+|+||++++++|+++|++|++++|+.        +..         ......+.+|++|++++.++++  
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDE--------KSD---------VNVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC----------C---------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc--------hhc---------cCceeEEEecCCCHHHHHHHHHHH
Confidence            568999999999999999999999999999999987        111         1246788999999999888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+..      
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  148 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATK------  148 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC------
Confidence                 68999999997543     12233347899999999888887654    44 57999999988654331      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC----
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN----  221 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~----  221 (249)
                                      +...|+.||.+.+.+.+.++.+.  ++++++|+||.|.++....       .........    
T Consensus       149 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~-------~~~~~~~~~~~~~  205 (269)
T 3vtz_A          149 ----------------NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIK-------AAKMEVGEDENAV  205 (269)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHH-------HHHHHHCCSTTHH
T ss_pred             ----------------CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhh-------hhhccccccchhh
Confidence                            24579999999999999988876  7999999999999875321       000000000    


Q ss_pred             -C-cccccccccccccchhhHHHhhhhc
Q 025660          222 -V-KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 -~-~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       . ...+........+.+.+|+|.++.|
T Consensus       206 ~~~~~~~~~~~p~~r~~~pedvA~~v~~  233 (269)
T 3vtz_A          206 ERKIEEWGRQHPMGRIGRPEEVAEVVAF  233 (269)
T ss_dssp             HHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             0 0112333455678889999998866

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.94  E-value=4.1e-26  Score=187.21  Aligned_cols=205  Identities=18%  Similarity=0.189  Sum_probs=145.4

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+++++|||||+|+||++++++|+++|++|++++|+..       +..+.+.+ ....+.++.++.+|++|++++.++++
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   77 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT-------TAMETMKETYKDVEERLQFVQADVTKKEDLHKIVE   77 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCCh-------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            35689999999999999999999999999999988761       22222222 22223478999999999999888876


Q ss_pred             -------CCCEEEEcccc--CCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCC
Q 025660           82 -------GCTGVLHVATP--VDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 -------~~d~vih~a~~--~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                             ++|+||||||.  ...     ...+.++..+++|+.++.++++++    ++.+ .++||++||....... . 
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~-~-  154 (264)
T 3i4f_A           78 EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAP-G-  154 (264)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCC-C-
T ss_pred             HHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccC-C-
Confidence                   68999999994  221     112233588999999999999887    4555 6899999997432111 1 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                        ..+...|+.||.+.+.+.+.++.+   +|+++++|+||.|+++.....    ........  
T Consensus       155 ------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~--  210 (264)
T 3i4f_A          155 ------------------WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT----IQEARQLK--  210 (264)
T ss_dssp             ------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC----HHHHHHC---
T ss_pred             ------------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc----cHHHHHHH--
Confidence                              012467999999999999988877   589999999999999875432    11111111  


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ........+...+|+|.++.|
T Consensus       211 ------~~~~p~~r~~~~~dva~~v~~  231 (264)
T 3i4f_A          211 ------EHNTPIGRSGTGEDIARTISF  231 (264)
T ss_dssp             -------------CCCCHHHHHHHHHH
T ss_pred             ------hhcCCCCCCcCHHHHHHHHHH
Confidence                  112233456788888888765

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.94  E-value=5.1e-26  Score=186.91  Aligned_cols=204  Identities=14%  Similarity=0.046  Sum_probs=146.2

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+  |+||++++++|+++|++|++++|+.     ...+..+.+....   ....++.+|++|++++.++++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~   79 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-----KLKGRVEEFAAQL---GSDIVLQCDVAEDASIDTMFA   79 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-----TTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-----HHHHHHHHHHHhc---CCcEEEEccCCCHHHHHHHHH
Confidence            45789999999  9999999999999999999999976     1112222232211   123688999999999888876


Q ss_pred             -------CCCEEEEccccCCC----------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCC
Q 025660           82 -------GCTGVLHVATPVDF----------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 -------~~d~vih~a~~~~~----------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~  143 (249)
                             ++|+||||||....          ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+  
T Consensus        80 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--  157 (265)
T 1qsg_A           80 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP--  157 (265)
T ss_dssp             HHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--
T ss_pred             HHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC--
Confidence                   57999999997542          1122334789999999999999998752 136999999977643321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+.   |+++++|+||.|++|..... .... ...+....
T Consensus       158 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~-~~~~~~~~  215 (265)
T 1qsg_A          158 --------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFR-KMLAHCEA  215 (265)
T ss_dssp             --------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHH-HHHHHHHH
T ss_pred             --------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cccH-HHHHHHHh
Confidence                                13579999999999999888764   89999999999999875321 1111 11111111


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                              ......+.+.+|+|.++.|
T Consensus       216 --------~~p~~~~~~~~dva~~v~~  234 (265)
T 1qsg_A          216 --------VTPIRRTVTIEDVGNSAAF  234 (265)
T ss_dssp             --------HSTTSSCCCHHHHHHHHHH
T ss_pred             --------cCCCCCCCCHHHHHHHHHH
Confidence                    1122346788898888766

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.94  E-value=3.1e-26  Score=187.66  Aligned_cols=203  Identities=18%  Similarity=0.120  Sum_probs=147.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++..+.+|++|++++.++++ 
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ--------ENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM   84 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999986        333322 2221223468889999999998888876 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|+||||||....      ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+    
T Consensus        85 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----  159 (260)
T 2zat_A           85 AVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFP----  159 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCC----
Confidence                  68999999997531      1122334889999999988888765    344 68999999987653321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||...+.+.+.++.+.   ++++++++||.+.++........  .....      
T Consensus       160 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~------  213 (260)
T 2zat_A          160 ------------------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD--KARKE------  213 (260)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS--HHHHH------
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC--hHHHH------
Confidence                              24579999999999999887764   89999999999998863210000  00000      


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        .+........+.+.+|+|.++.|
T Consensus       214 --~~~~~~~~~~~~~~~dva~~v~~  236 (260)
T 2zat_A          214 --YMKESLRIRRLGNPEDCAGIVSF  236 (260)
T ss_dssp             --HHHHHHTCSSCBCGGGGHHHHHH
T ss_pred             --HHHhcCCCCCCCCHHHHHHHHHH
Confidence              11222334568899999998866

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.94  E-value=7.4e-26  Score=185.84  Aligned_cols=170  Identities=14%  Similarity=0.111  Sum_probs=130.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   74 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQ--------ARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA   74 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            567999999999999999999999999999999987        444333 2222234568889999999999888876 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+     
T Consensus        75 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~-----  148 (264)
T 3tfo_A           75 AVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVP-----  148 (264)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCC-----
Confidence                  689999999986441     223345889999999988777664    345 57999999987654321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-CCcEEEeecCeEeCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~vrp~~v~g~~~~  204 (249)
                                       ....|+.||.+.+.+.+.++.+. ++++++|+||.|.++...
T Consensus       149 -----------------~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~  190 (264)
T 3tfo_A          149 -----------------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAG  190 (264)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------
T ss_pred             -----------------CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccc
Confidence                             14579999999999999988875 899999999999988653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.94  E-value=6.1e-26  Score=184.65  Aligned_cols=202  Identities=18%  Similarity=0.131  Sum_probs=147.4

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+....  +.++.++.+|++|+++++++++ 
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   73 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINA--------EGAKAAAASI--GKKARAIAADISDPGSVKALFAE   73 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHH--CTTEEECCCCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHH
Confidence            3568999999999999999999999999999999987        4444332211  3468899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHH----HHhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++..+++|+.++.+++++    +++.+..++||++||..++.+.+     
T Consensus        74 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  148 (247)
T 3rwb_A           74 IQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP-----  148 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT-----
T ss_pred             HHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC-----
Confidence                  68999999997644     12233458899999999998887    44444357999999987654332     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++............+...      
T Consensus       149 -----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~------  205 (247)
T 3rwb_A          149 -----------------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEM------  205 (247)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHH------
T ss_pred             -----------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhc------
Confidence                             1457999999999988888776   58999999999999875432211111111111      


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           ......+...+|++.++.|
T Consensus       206 -----~~~~~r~~~pedva~~v~~  224 (247)
T 3rwb_A          206 -----LQAMKGKGQPEHIADVVSF  224 (247)
T ss_dssp             -----HSSSCSCBCHHHHHHHHHH
T ss_pred             -----ccccCCCcCHHHHHHHHHH
Confidence                 0223345667788887765

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.94  E-value=8.7e-26  Score=186.13  Aligned_cols=205  Identities=20%  Similarity=0.124  Sum_probs=148.1

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..++|++|||||+|+||++++++|+++|++|++++|+..       +..+.+. .+...+.++.++.+|+++++++.++
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   97 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNA-------EVADALKNELEEKGYKAAVIKFDAASESDFIEA   97 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            3345689999999999999999999999999999999651       2222221 1222245789999999999998888


Q ss_pred             Hc-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|+||||||.....     ..+.++..+++|+.++.++++.+.+    .+ .++||++||..++.+.+  
T Consensus        98 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--  174 (271)
T 4iin_A           98 IQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNM--  174 (271)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT--
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCC--
Confidence            76       689999999986541     2233458899999999888777654    34 57999999987654321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+   .++++++++||.+.++.......            
T Consensus       175 --------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------  222 (271)
T 4iin_A          175 --------------------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD------------  222 (271)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------------
T ss_pred             --------------------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH------------
Confidence                                2467999999999999988776   48999999999999886533111            


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .....+........+...+|+|.++.|
T Consensus       223 ~~~~~~~~~~~~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          223 ELKADYVKNIPLNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             -----CGGGCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHhcCCcCCCcCHHHHHHHHHH
Confidence            001112233444568889999998765

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=2.1e-25  Score=181.27  Aligned_cols=199  Identities=18%  Similarity=0.136  Sum_probs=145.8

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..    ++.++.+|++|++++.+++
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~   68 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE--------GPLREAAEAV----GAHPVVMDVADPASVERGF   68 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTT----TCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHc----CCEEEEecCCCHHHHHHHH
Confidence            655678999999999999999999999999999999986        4444433221    2688999999999988887


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||.....     ..+.++..+++|+.++.++++++.+.    + .++||++||.. ..+.+   
T Consensus        69 ~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~~---  143 (245)
T 1uls_A           69 AEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGNL---  143 (245)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCCT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCCC---
Confidence            6       489999999975431     12334588999999999988877543    4 57999999987 43321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                         +...|+.||...+.+.+.++.+   +|+++++|+||.+.++..... ..   .........
T Consensus       144 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~---~~~~~~~~~  200 (245)
T 1uls_A          144 -------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-PE---KVREKAIAA  200 (245)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-CH---HHHHHHHHT
T ss_pred             -------------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-CH---HHHHHHHhh
Confidence                               1357999999999888887765   489999999999999865421 11   111111111


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                              .....+...+|+|.+++|
T Consensus       201 --------~p~~~~~~~~dvA~~v~~  218 (245)
T 1uls_A          201 --------TPLGRAGKPLEVAYAALF  218 (245)
T ss_dssp             --------CTTCSCBCHHHHHHHHHH
T ss_pred             --------CCCCCCcCHHHHHHHHHH
Confidence                    112236788888888765

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.94  E-value=1.8e-26  Score=190.26  Aligned_cols=203  Identities=11%  Similarity=0.034  Sum_probs=148.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ +++...+.++.++.+|++|++++.++++ 
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   96 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDP--------SRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFAR   96 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH--------HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999986        443332 2222234578899999999999988887 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+     
T Consensus        97 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~-----  170 (271)
T 4ibo_A           97 LDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARA-----  170 (271)
T ss_dssp             HHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT-----
T ss_pred             HHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCC-----
Confidence                  68999999997543     12233348899999999998776654    34 57999999987643321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++........  ......      
T Consensus       171 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~------  225 (271)
T 4ibo_A          171 -----------------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--PEFDAW------  225 (271)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--HHHHHH------
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--HHHHHH------
Confidence                             2457999999999999988776   489999999999999864321000  001111      


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        +........+...+|+|.+++|
T Consensus       226 --~~~~~p~~r~~~pedva~~v~~  247 (271)
T 4ibo_A          226 --VKARTPAKRWGKPQELVGTAVF  247 (271)
T ss_dssp             --HHHHSTTCSCBCGGGGHHHHHH
T ss_pred             --HHhcCCCCCCcCHHHHHHHHHH
Confidence              1122334456777888887765

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.94  E-value=6.8e-26  Score=187.29  Aligned_cols=203  Identities=16%  Similarity=0.184  Sum_probs=148.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|+++++++++ 
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  102 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHS--------DALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ  102 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999987        333332 2222233478899999999999988887 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||.....     ..+.++..+++|+.++.++++++.+    .+..++||++||..++.....    
T Consensus       103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~----  178 (276)
T 3r1i_A          103 MTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP----  178 (276)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC----
Confidence                  689999999986541     2233457889999999998887754    332378999999875432210    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                      .+.+.|+.||.+.+.+.+.++.+   +++++++|+||.|.++..... ...    ....     
T Consensus       179 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~----~~~~-----  232 (276)
T 3r1i_A          179 ----------------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL-ADY----HALW-----  232 (276)
T ss_dssp             ----------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG-GGG----HHHH-----
T ss_pred             ----------------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-hHH----HHHH-----
Confidence                            12457999999999999988877   489999999999999875432 111    1111     


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         ........+...+|+|.++.|
T Consensus       233 ---~~~~p~~r~~~pedvA~~v~f  253 (276)
T 3r1i_A          233 ---EPKIPLGRMGRPEELTGLYLY  253 (276)
T ss_dssp             ---GGGSTTSSCBCGGGSHHHHHH
T ss_pred             ---HhcCCCCCCcCHHHHHHHHHH
Confidence               112233456677888877765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=8.9e-26  Score=182.56  Aligned_cols=191  Identities=20%  Similarity=0.139  Sum_probs=144.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      +|++|||||+|+||++++++|+++|++|++++|+.        +           ..++.++.+|++|++++.++++   
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~--------~-----------~~~~~~~~~D~~~~~~~~~~~~~~~   62 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRR--------E-----------GEDLIYVEGDVTREEDVRRAVARAQ   62 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC--------C-----------SSSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCc--------c-----------ccceEEEeCCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999987        1           1235789999999999999887   


Q ss_pred             ---CCCEEEEccccCCCC-----CCC----hHHHhhhhHHhHHHHHHHHHHhcC---------CcceEEEEcccceeecc
Q 025660           82 ---GCTGVLHVATPVDFE-----DKE----PEEVITQRAINGTLGILKSCLKSG---------TVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        82 ---~~d~vih~a~~~~~~-----~~~----~~~~~~~~n~~~t~~l~~~~~~~~---------~~~~~v~~SS~~~~~~~  140 (249)
                         ++|+|||+||.....     ..+    .++..+++|+.++.++++++.+.-         ..++||++||..++.+.
T Consensus        63 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  142 (242)
T 1uay_A           63 EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ  142 (242)
T ss_dssp             HHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC
T ss_pred             hhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC
Confidence               789999999975431     111    345889999999999999887531         12399999998765432


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHH
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~  217 (249)
                      .                      +...|+.||...+.+.+.++.+.   +++++++|||.++|+......    ..+...
T Consensus       143 ~----------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~  196 (242)
T 1uay_A          143 I----------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP----EKAKAS  196 (242)
T ss_dssp             T----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC----HHHHHH
T ss_pred             C----------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc----hhHHHH
Confidence            1                      24679999999999988887663   899999999999998643321    122222


Q ss_pred             HcCCCcccccccccccccchhhHHHhhhhc
Q 025660          218 ILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +....++       ...+++.+|+|.++.|
T Consensus       197 ~~~~~~~-------~~~~~~~~dva~~~~~  219 (242)
T 1uay_A          197 LAAQVPF-------PPRLGRPEEYAALVLH  219 (242)
T ss_dssp             HHTTCCS-------SCSCCCHHHHHHHHHH
T ss_pred             HHhhCCC-------cccCCCHHHHHHHHHH
Confidence            2222111       1357889999998865

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.7e-25  Score=181.81  Aligned_cols=166  Identities=15%  Similarity=0.114  Sum_probs=132.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+.    .++.++.+|++|+++++++.+  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~   72 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE--------SKLQELEKY----PGIQTRVLDVTKKKQIDQFANEV   72 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHGGGGGS----TTEEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHhc----cCceEEEeeCCCHHHHHHHHHHh
Confidence            567899999999999999999999999999999987        444444322    267899999999999887764  


Q ss_pred             -CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 -GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 -~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                       ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+          
T Consensus        73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  141 (246)
T 2ag5_A           73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV----------  141 (246)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC----------
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCC----------
Confidence             68999999997543     11233347899999999998887753    44 68999999987543221          


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                 .+...|+.||.+.+.+.+.++.+.   |+++++||||.+++|..
T Consensus       142 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  185 (246)
T 2ag5_A          142 -----------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSL  185 (246)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHH
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcch
Confidence                       024579999999999999887763   89999999999999853

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.94  E-value=2e-25  Score=181.35  Aligned_cols=174  Identities=18%  Similarity=0.126  Sum_probs=136.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..++|++|||||+++||++++++|+++|++|++++|+.        ++.+.+ +++...+.++..+.+|++|+++++++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~--------~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~   74 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLE--------DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEF   74 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            445789999999999999999999999999999999987        554433 33333456789999999999998888


Q ss_pred             Hc-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCC
Q 025660           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      ++       ++|++|||||....      ...+.++..+++|+.++.++.+++.    +.+ .++||++||..+..+.+.
T Consensus        75 ~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~  153 (254)
T 4fn4_A           75 VRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFA  153 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSS
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCC
Confidence            76       58999999996532      1223345899999999877766554    455 589999999876543322


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                            ...|+.||.....+.+.++.+   +|++++.|.||.|.+|....
T Consensus       154 ----------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~  197 (254)
T 4fn4_A          154 ----------------------GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLG  197 (254)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTS
T ss_pred             ----------------------ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccccc
Confidence                                  357999999888877777666   48999999999999987544

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.94  E-value=5.3e-26  Score=186.45  Aligned_cols=204  Identities=14%  Similarity=0.058  Sum_probs=146.1

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+  |+||++++++|+++|++|++++|+.     ...+..+.+.+..   ..+.++.+|++|++++.++++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~   78 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-----RLRPEAEKLAEAL---GGALLFRADVTQDEELDALFA   78 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG-----GGHHHHHHHHHHT---TCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHH
Confidence            45789999999  9999999999999999999999986     1111223332211   136889999999999888876


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             ++|+||||||....         ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+   
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---  155 (261)
T 2wyu_A           79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP---  155 (261)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT---
T ss_pred             HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC---
Confidence                   68999999997531         1223335889999999999999998752 136999999976543221   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                         +...|+.||.+.+.+.+.++.+.   |+++++|+||.|+++..... ... ....+.... 
T Consensus       156 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~-~~~~~~~~~-  213 (261)
T 2wyu_A          156 -------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PGF-TKMYDRVAQ-  213 (261)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC-TTH-HHHHHHHHH-
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc-ccc-HHHHHHHHh-
Confidence                               13579999999999999887764   89999999999999865321 111 111111111 


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                             ......+.+.+|+|.++.|
T Consensus       214 -------~~p~~~~~~~~dva~~v~~  232 (261)
T 2wyu_A          214 -------TAPLRRNITQEEVGNLGLF  232 (261)
T ss_dssp             -------HSTTSSCCCHHHHHHHHHH
T ss_pred             -------cCCCCCCCCHHHHHHHHHH
Confidence                   1122346678888888765

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.94  E-value=1.2e-25  Score=181.29  Aligned_cols=169  Identities=22%  Similarity=0.190  Sum_probs=123.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++++||||||+|+||++++++|+++|++|++++|+.        ++.+.+....   .++.++.+|++|++++.+++
T Consensus         1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~   69 (234)
T 2ehd_A            1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDE--------KRLQALAAEL---EGALPLPGDVREEGDWARAV   69 (234)
T ss_dssp             ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS---TTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh---hhceEEEecCCCHHHHHHHH
Confidence            666778999999999999999999999999999999986        4444332211   15788999999999888877


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+|||+||.....     ..+.++..+++|+.++.++++.+    ++.+ .++||++||..++.+..   
T Consensus        70 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---  145 (234)
T 2ehd_A           70 AAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFK---  145 (234)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCCT---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCCC---
Confidence            5       689999999975431     12233488999999987655544    4555 68999999987643211   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                         +...|+.||...+.+.+.++.+   ++++++++|||.+.++..
T Consensus       146 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  188 (234)
T 2ehd_A          146 -------------------GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFA  188 (234)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------
T ss_pred             -------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcc
Confidence                               2457999999999888877665   489999999999988753

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.8e-26  Score=189.65  Aligned_cols=166  Identities=20%  Similarity=0.133  Sum_probs=132.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+....  +.++.++.+|++|++++.++++  
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   97 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDG--------DAADAAATKI--GCGAAACRVDVSDEQQIIAMVDAC   97 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987        4444332211  3467899999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+      
T Consensus        98 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~------  170 (277)
T 3gvc_A           98 VAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVG------  170 (277)
T ss_dssp             HHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC------
Confidence                 68999999998643     12233358899999999888887754    44 57999999987643321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                      +...|+.||.+.+.+.+.++.+   +|+++++|+||.|++|.
T Consensus       171 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  212 (277)
T 3gvc_A          171 ----------------GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM  212 (277)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence                            2457999999999999888776   58999999999999975

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.94  E-value=7.3e-26  Score=186.16  Aligned_cols=205  Identities=18%  Similarity=0.100  Sum_probs=144.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ +++..  .+.++.++.+|++|++++.+++
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   83 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSS--------EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence            457899999999999999999999999999999986        333322 11111  1346889999999999988887


Q ss_pred             c-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCC
Q 025660           81 A-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      +       ++|+||||||....      ...+.++..+++|+.++.++.+.+    ++.+ .++||++||..++.+.+  
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--  160 (267)
T 1iy8_A           84 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIG--  160 (267)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCS--
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCC--
Confidence            6       68999999997532      112334588999998887665544    4555 68999999987643321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCC----CCccHHHHHH
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPK----FAGSVRSSLA  216 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~----~~~~~~~~~~  216 (249)
                                          +...|+.||...+.+.+.++.+   +|+++++|+||.++++.....    .+........
T Consensus       161 --------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  220 (267)
T 1iy8_A          161 --------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAE  220 (267)
T ss_dssp             --------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHH
T ss_pred             --------------------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHH
Confidence                                2457999999999999888766   489999999999998753210    0011110000


Q ss_pred             HHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          217 LILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .        +........+...+|+|.+++|
T Consensus       221 ~--------~~~~~p~~r~~~~~dvA~~v~~  243 (267)
T 1iy8_A          221 E--------FIQVNPSKRYGEAPEIAAVVAF  243 (267)
T ss_dssp             H--------HHTTCTTCSCBCHHHHHHHHHH
T ss_pred             H--------HhccCCCCCCcCHHHHHHHHHH
Confidence            1        1111233457889999998876

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.3e-25  Score=186.05  Aligned_cols=204  Identities=17%  Similarity=0.162  Sum_probs=136.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       +..+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  100 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDA-------EGVAPVIAELSGLGARVIFLRADLADLSSHQATVDA  100 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCH-------HHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCH-------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999997541       222222 2222234578999999999999888877 


Q ss_pred             ------CCCEEEEccccCC--C-----CCCChHHHhhhhHHhHHHHHHHHHHhc----C--CcceEEEEcccceeeccCC
Q 025660           82 ------GCTGVLHVATPVD--F-----EDKEPEEVITQRAINGTLGILKSCLKS----G--TVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        82 ------~~d~vih~a~~~~--~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~--~~~~~v~~SS~~~~~~~~~  142 (249)
                            ++|+||||||...  .     ...+.++..+++|+.++.++++++.+.    +  ..++||++||..++.+.+.
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~  180 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE  180 (280)
T ss_dssp             HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C
T ss_pred             HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC
Confidence                  6899999999732  1     122334588999999999888877543    1  1358999999877544321


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHc
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~  219 (249)
                                            ...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++........    ......
T Consensus       181 ----------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~  234 (280)
T 4da9_A          181 ----------------------RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK----YDGLIE  234 (280)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------
T ss_pred             ----------------------ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh----HHHHHh
Confidence                                  457999999999999988877   489999999999999875432111    000000


Q ss_pred             CCCcccccccccccccchhhHHHhhhhc
Q 025660          220 GNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                             ........+...+|+|.+++|
T Consensus       235 -------~~~~p~~r~~~pedvA~~v~~  255 (280)
T 4da9_A          235 -------SGLVPMRRWGEPEDIGNIVAG  255 (280)
T ss_dssp             --------------CCBCHHHHHHHHHH
T ss_pred             -------hcCCCcCCcCCHHHHHHHHHH
Confidence                   112234567788999988876

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.94  E-value=1.5e-25  Score=185.05  Aligned_cols=201  Identities=19%  Similarity=0.152  Sum_probs=145.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEc-CCCCcccCCchhhhhh-ccCCCC-CCCeEEEEcCCCCh----hhH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR-SELDPEHRNSKDLSFL-KNLPGA-SERLRIFHADLSHP----DGF   76 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~~Dl~~~----~~~   76 (249)
                      +++++|||||+|+||++++++|+++|++|++++| +.        ++.+.+ .++... +.++.++.+|++|+    +++
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE--------GAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCC   81 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCh--------HHHHHHHHHHHHhcCCceEEEeccCCCccccHHHH
Confidence            3478999999999999999999999999999999 65        333322 111111 24688999999999    888


Q ss_pred             HHHHc-------CCCEEEEccccCCCC-----CC-----------ChHHHhhhhHHhHHHHHHHHHHhcC--Cc------
Q 025660           77 DAAIA-------GCTGVLHVATPVDFE-----DK-----------EPEEVITQRAINGTLGILKSCLKSG--TV------  125 (249)
Q Consensus        77 ~~~~~-------~~d~vih~a~~~~~~-----~~-----------~~~~~~~~~n~~~t~~l~~~~~~~~--~~------  125 (249)
                      .++++       ++|+||||||.....     ..           +.++..+++|+.++.++++++.+.-  ..      
T Consensus        82 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  161 (276)
T 1mxh_A           82 EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRN  161 (276)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            88876       689999999975431     11           3345789999999999999987742  13      


Q ss_pred             ceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       126 ~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                      ++||++||..++.+.+                      +...|+.||...+.+.+.++.+.   |+++++|+||.+++| 
T Consensus       162 g~iv~isS~~~~~~~~----------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-  218 (276)
T 1mxh_A          162 LSVVNLCDAMTDLPLP----------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-  218 (276)
T ss_dssp             EEEEEECCGGGGSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-
T ss_pred             cEEEEECchhhcCCCC----------------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-
Confidence            7999999987653321                      24579999999999999887764   899999999999998 


Q ss_pred             CCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          203 ICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      . . ..   ...........++       .+++.+.+|+|.+++|
T Consensus       219 ~-~-~~---~~~~~~~~~~~p~-------~r~~~~~~dva~~v~~  251 (276)
T 1mxh_A          219 P-A-MP---QETQEEYRRKVPL-------GQSEASAAQIADAIAF  251 (276)
T ss_dssp             S-S-SC---HHHHHHHHTTCTT-------TSCCBCHHHHHHHHHH
T ss_pred             c-c-CC---HHHHHHHHhcCCC-------CCCCCCHHHHHHHHHH
Confidence            2 1 11   1122222111111       1237889999998866

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=2.5e-25  Score=180.57  Aligned_cols=176  Identities=15%  Similarity=0.149  Sum_probs=132.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++|||||+|+||++++++|+++|  ++|++++|+.        +..+.+.+.  ...++.++.+|+++++++.++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~--------~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~   71 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV--------EKATELKSI--KDSRVHVLPLTVTCDKSLDTFVS   71 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSG--------GGCHHHHTC--CCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCH--------HHHHHHHhc--cCCceEEEEeecCCHHHHHHHHH
Confidence            45789999999999999999999999  9999999987        444444443  24578999999999999888887


Q ss_pred             ---------CCCEEEEccccCC-C-----CCCChHHHhhhhHHhHHHHHHHHHHhc----------CC----cceEEEEc
Q 025660           82 ---------GCTGVLHVATPVD-F-----EDKEPEEVITQRAINGTLGILKSCLKS----------GT----VKRVVYTS  132 (249)
Q Consensus        82 ---------~~d~vih~a~~~~-~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----------~~----~~~~v~~S  132 (249)
                               ++|+||||||... .     ...+.++..+++|+.++.++++++.+.          +.    .++||++|
T Consensus        72 ~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  151 (250)
T 1yo6_A           72 KVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             HHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             HHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEec
Confidence                     7999999999765 2     112223478999999999988877543          10    47999999


Q ss_pred             ccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       133 S~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                      |..++......      ..+         ..+...|+.||.+.+.+++.++.+.   ++++++++||.+.++...
T Consensus       152 S~~~~~~~~~~------~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  211 (250)
T 1yo6_A          152 SGLGSITDNTS------GSA---------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG  211 (250)
T ss_dssp             CGGGCSTTCCS------TTS---------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------
T ss_pred             cCccccCCccc------ccc---------cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC
Confidence            98765432110      000         1235689999999999999988775   899999999999998653

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.94  E-value=2.8e-25  Score=183.12  Aligned_cols=203  Identities=16%  Similarity=0.104  Sum_probs=147.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++++..       +..+.+ .++...+.++.++.+|++|+++++++++ 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~  102 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA-------ERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRE  102 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999977651       222222 2222234578899999999999888877 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                            ++|++|||||....     ...+.++..+++|+.++.++++++.+. ...++||++||..+.....        
T Consensus       103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~--------  174 (271)
T 3v2g_A          103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPW--------  174 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCS--------
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCC--------
Confidence                  68999999997543     122334588999999999999998765 1257999999965432210        


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccc
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI  226 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (249)
                                   .+...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++..... .........          
T Consensus       175 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~----------  230 (271)
T 3v2g_A          175 -------------PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD-GDHAEAQRE----------  230 (271)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS-CSSHHHHHH----------
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc-chhHHHHHh----------
Confidence                         124679999999999998887764   89999999999999876432 222211111          


Q ss_pred             cccccccccchhhHHHhhhhc
Q 025660          227 CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ......+...+|+|.++.|
T Consensus       231 --~~~~~r~~~pedvA~~v~f  249 (271)
T 3v2g_A          231 --RIATGSYGEPQDIAGLVAW  249 (271)
T ss_dssp             --TCTTSSCBCHHHHHHHHHH
T ss_pred             --cCCCCCCCCHHHHHHHHHH
Confidence              1122345677888887765

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.94  E-value=3.2e-26  Score=188.68  Aligned_cols=201  Identities=16%  Similarity=0.114  Sum_probs=148.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++..+.+|++|++++.++++ 
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   98 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTE--------AGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES   98 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        443332 2222223467889999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+     
T Consensus        99 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  172 (270)
T 3ftp_A           99 TLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNP-----  172 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC-----
Confidence                  68999999997543     12233458899999999999887753    34 57999999987654332     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++......    .......     
T Consensus       173 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~~~~-----  226 (270)
T 3ftp_A          173 -----------------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP----QEQQTAL-----  226 (270)
T ss_dssp             -----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC----HHHHHHH-----
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC----HHHHHHH-----
Confidence                             2457999999999988888776   4899999999999887532211    1111111     


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         ........+...+|+|.++.|
T Consensus       227 ---~~~~p~~r~~~pedvA~~v~~  247 (270)
T 3ftp_A          227 ---KTQIPLGRLGSPEDIAHAVAF  247 (270)
T ss_dssp             ---HTTCTTCSCBCHHHHHHHHHH
T ss_pred             ---HhcCCCCCCCCHHHHHHHHHH
Confidence               122234567788999988765

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.94  E-value=8.6e-26  Score=185.81  Aligned_cols=207  Identities=16%  Similarity=0.154  Sum_probs=144.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+.++|++|||||+|+||++++++|+++|++|++++++..       +..+.+. .+...+.++.++.+|++|+++++++
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   95 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKA-------AAAEEVAGKIEAAGGKALTAQADVSDPAAVRRL   95 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCS-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            3445689999999999999999999999999999866541       3333221 2222345788999999999998888


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccc
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      ++       ++|++|||||....     ...+.++..+++|+.++.++++++.+.- ..++||++||..+..+.+     
T Consensus        96 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  170 (267)
T 3u5t_A           96 FATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP-----  170 (267)
T ss_dssp             HHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC-----
Confidence            76       68999999997644     1223345788999999999999887641 136999999987643321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++........   ....       
T Consensus       171 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~-------  223 (267)
T 3u5t_A          171 -----------------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSD---EVRD-------  223 (267)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHH-------
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCH---HHHH-------
Confidence                             14579999999999999998874   79999999999998864321110   0111       


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       .+........+...+|+|.++.|
T Consensus       224 -~~~~~~p~~r~~~pedvA~~v~~  246 (267)
T 3u5t_A          224 -RFAKLAPLERLGTPQDIAGAVAF  246 (267)
T ss_dssp             -HHHTSSTTCSCBCHHHHHHHHHH
T ss_pred             -HHHhcCCCCCCcCHHHHHHHHHH
Confidence             11222334567788999988876

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.94  E-value=9.9e-26  Score=187.11  Aligned_cols=201  Identities=14%  Similarity=0.081  Sum_probs=144.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~  114 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ--------KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK  114 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH--------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCH--------HHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999988876        333322 2222223468899999999999988875 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||.....     ..+.++..+++|+.++.++++.+.    +.+ .++||++||..++.+.+     
T Consensus       115 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----  188 (285)
T 2c07_A          115 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV-----  188 (285)
T ss_dssp             HHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT-----
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC-----
Confidence                  589999999976431     122334789999999877777665    345 68999999987654321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+.   ++++++++||.+.++..... .   ..........  
T Consensus       189 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~~--  245 (285)
T 2c07_A          189 -----------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI-S---EQIKKNIISN--  245 (285)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C-C---HHHHHHHHTT--
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc-C---HHHHHHHHhh--
Confidence                             13579999999999998887663   89999999999999865321 1   1122211111  


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            .....+++.+|+|.+++|
T Consensus       246 ------~~~~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          246 ------IPAGRMGTPEEVANLACF  263 (285)
T ss_dssp             ------CTTSSCBCHHHHHHHHHH
T ss_pred             ------CCCCCCCCHHHHHHHHHH
Confidence                  122357899999998765

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.94  E-value=1.5e-25  Score=183.75  Aligned_cols=167  Identities=20%  Similarity=0.181  Sum_probs=128.3

Q ss_pred             CCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ..++|++|||||+|+||++++++|+++|++|++++|+..       ...+.+.+.     ++.++.+|++|++++.++++
T Consensus        24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-------~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~   91 (260)
T 3gem_A           24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH-------ASVTELRQA-----GAVALYGDFSCETGIMAFID   91 (260)
T ss_dssp             ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC-------HHHHHHHHH-----TCEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH-------HHHHHHHhc-----CCeEEECCCCCHHHHHHHHH
Confidence            345689999999999999999999999999999999872       222223322     36889999999999888876


Q ss_pred             -------CCCEEEEccccCCCCC----CChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 -------GCTGVLHVATPVDFED----KEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~~----~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                             ++|+||||||......    .+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+     
T Consensus        92 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----  165 (260)
T 3gem_A           92 LLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGSS-----  165 (260)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCCS-----
T ss_pred             HHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCC-----
Confidence                   5899999999754411    122347899999999998887754    34 57999999987654321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~  203 (249)
                                       +...|+.||.+.+.+.+.++.+.  ++++++|+||.+.++..
T Consensus       166 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~  207 (260)
T 3gem_A          166 -----------------KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPK  207 (260)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---
T ss_pred             -----------------CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCC
Confidence                             24579999999999999888775  59999999999988753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.94  E-value=4.9e-26  Score=184.49  Aligned_cols=200  Identities=18%  Similarity=0.131  Sum_probs=145.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEE-EcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +|++|||||+|+||++++++|+++|++|+++ +|+.        +..+.+. ++...+.++.++.+|++|++++.++++ 
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSA--------KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKT   72 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHH
Confidence            3689999999999999999999999999985 6665        3333221 111113467889999999999988886 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+|||+||....     ...+.++..+++|+.++.++++.+.+    .+ .++||++||..++.+.+     
T Consensus        73 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-----  146 (244)
T 1edo_A           73 AIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNI-----  146 (244)
T ss_dssp             HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCCC-----
Confidence                  68999999997643     11223347899999999998888765    34 68999999987654321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||...+.+.+.++.+   .+++++++|||.++++......    ..........  
T Consensus       147 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~--  203 (244)
T 1edo_A          147 -----------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG----EDMEKKILGT--  203 (244)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC----HHHHHHHHTS--
T ss_pred             -----------------CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC----hHHHHHHhhc--
Confidence                             1457999999999988887766   4899999999999998643211    1111211111  


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            .....+++.+|+|.++.|
T Consensus       204 ------~~~~~~~~~~dva~~~~~  221 (244)
T 1edo_A          204 ------IPLGRTGQPENVAGLVEF  221 (244)
T ss_dssp             ------CTTCSCBCHHHHHHHHHH
T ss_pred             ------CCCCCCCCHHHHHHHHHH
Confidence                  122457889999988765

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.94  E-value=1.5e-25  Score=183.89  Aligned_cols=193  Identities=20%  Similarity=0.134  Sum_probs=139.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|+++++++.++++ 
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   99 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV--------EKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG   99 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999987        444333 2222234578899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            .+|+||||||....      ...+.++..+++|+.++.++++.+.+    .+ .++||++||..++.+..    
T Consensus       100 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----  174 (262)
T 3rkr_A          100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVA----  174 (262)
T ss_dssp             HHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCT----
T ss_pred             HHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCC----
Confidence                  48999999997321      12233347899999999998887654    44 68999999987643321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||.+.+.+.+.++.+   .|+++++|+||.|.++.......              
T Consensus       175 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------------  222 (262)
T 3rkr_A          175 ------------------DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA--------------  222 (262)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc--------------
Confidence                              2467999999999999888776   48999999999998876432100              


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ......++..+|+|.++.|
T Consensus       223 ------~~~~~~~~~p~dvA~~v~~  241 (262)
T 3rkr_A          223 ------KKSALGAIEPDDIADVVAL  241 (262)
T ss_dssp             ------------CCCHHHHHHHHHH
T ss_pred             ------ccccccCCCHHHHHHHHHH
Confidence                  0112345678888888765

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.94  E-value=1.9e-25  Score=185.34  Aligned_cols=204  Identities=12%  Similarity=0.020  Sum_probs=144.7

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++|||||+  |+||++++++|+++|++|++++|+.     ...+..+.+....   ..+.++.+|++|++++.++++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~   91 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP-----KLEKRVREIAKGF---GSDLVVKCDVSLDEDIKNLKK   91 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHH
Confidence            45789999999  9999999999999999999999986     1111222332211   136789999999999888876


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeeccCCC
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~  143 (249)
                             ++|+||||||....         ...+.++..+++|+.++.++++++.+.-  ..++||++||..++.+.+  
T Consensus        92 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--  169 (285)
T 2p91_A           92 FLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP--  169 (285)
T ss_dssp             HHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT--
T ss_pred             HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC--
Confidence                   68999999997531         1122335889999999999999987652  137999999976543221  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+.   |+++++|+||.|++|..... .... ...+....
T Consensus       170 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~-~~~~~~~~  227 (285)
T 2p91_A          170 --------------------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-TGFH-LLMEHTTK  227 (285)
T ss_dssp             --------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-TTHH-HHHHHHHH
T ss_pred             --------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-cchH-HHHHHHHh
Confidence                                13579999999999998887763   89999999999999875431 1111 11111111


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                              ......+.+.+|+|.++.|
T Consensus       228 --------~~p~~~~~~~~dva~~~~~  246 (285)
T 2p91_A          228 --------VNPFGKPITIEDVGDTAVF  246 (285)
T ss_dssp             --------HSTTSSCCCHHHHHHHHHH
T ss_pred             --------cCCCCCCcCHHHHHHHHHH
Confidence                    1122346678888888765

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=3.3e-26  Score=187.94  Aligned_cols=209  Identities=14%  Similarity=0.120  Sum_probs=150.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTV--------ERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDE   81 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            457999999999999999999999999999999986        443332 2222234578999999999999888876 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeeccCCCcccc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                            ++|++|||||....      ...+.++..+++|+.++.++++++.+.-  ..++||++||..++.+.+      
T Consensus        82 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  155 (264)
T 3ucx_A           82 TMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA------  155 (264)
T ss_dssp             HHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT------
T ss_pred             HHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC------
Confidence                  68999999987422      1123335889999999999998875431  026999999987654321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC--
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV--  222 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~--  222 (249)
                                      +...|+.||...+.+.+.++.+   +|+++++|+||.|++|.....    ....... .+..  
T Consensus       156 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~-~~~~~~  214 (264)
T 3ucx_A          156 ----------------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSY----FEHQAGK-YGTSVE  214 (264)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHH----HHHHHHH-TTCCHH
T ss_pred             ----------------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHH----HHhhhhh-cCCCHH
Confidence                            1457999999999999888776   589999999999998854321    0000000 0000  


Q ss_pred             --cccccccccccccchhhHHHhhhhc
Q 025660          223 --KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 --~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        .-.+........+...+|+|.++.|
T Consensus       215 ~~~~~~~~~~p~~r~~~p~dvA~~v~~  241 (264)
T 3ucx_A          215 DIYNAAAAGSDLKRLPTEDEVASAILF  241 (264)
T ss_dssp             HHHHHHHTTSSSSSCCBHHHHHHHHHH
T ss_pred             HHHHHHhccCCcccCCCHHHHHHHHHH
Confidence              0011233455678899999998876

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.94  E-value=5.2e-26  Score=185.90  Aligned_cols=204  Identities=17%  Similarity=0.083  Sum_probs=151.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+.+..  +.++.++.+|++|++++.++++  
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   76 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNE--------SNIARIREEF--GPRVHALRSDIADLNEIAVLGAAA   76 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--CCcceEEEccCCCHHHHHHHHHHH
Confidence            458999999999999999999999999999999987        4444432221  2368899999999998887765  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCC
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                           ++|++|||||....     ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+         
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  147 (255)
T 4eso_A           77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP---------  147 (255)
T ss_dssp             HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT---------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC---------
Confidence                 68999999997643     1223345889999999999999998741 146999999987654332         


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCC-CCc-cHHHHHHHHcCCCccc
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK-FAG-SVRSSLALILGNVKLK  225 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~-~~~-~~~~~~~~~~~~~~~~  225 (249)
                                   +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.+|..... ... ....+....       
T Consensus       148 -------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-------  207 (255)
T 4eso_A          148 -------------GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLG-------  207 (255)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHH-------
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHH-------
Confidence                         24579999999999999888774   89999999999999875432 111 111111111       


Q ss_pred             ccccccccccchhhHHHhhhhc
Q 025660          226 ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ........+...+|+|.++.|
T Consensus       208 -~~~~p~~r~~~pedvA~~v~~  228 (255)
T 4eso_A          208 -DNITPMKRNGTADEVARAVLF  228 (255)
T ss_dssp             -HHHSTTSSCBCHHHHHHHHHH
T ss_pred             -hccCCCCCCcCHHHHHHHHHH
Confidence             122334556788898888766

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.94  E-value=3.1e-25  Score=182.24  Aligned_cols=203  Identities=17%  Similarity=0.109  Sum_probs=145.1

Q ss_pred             CCCeEEEeccch-hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC-CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTG-FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +++++|||||+| .||++++++|+++|++|++++|+.        ++.+.+ .++.. ...++.++.+|++|++++++++
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   92 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE--------RRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALI   92 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH--------HHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHH
Confidence            467999999987 699999999999999999999987        333322 22211 2347899999999999988887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||....     ...+.++..+++|+.++.++++.+.+.    +..++||++||..++.+..   
T Consensus        93 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---  169 (266)
T 3o38_A           93 TQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH---  169 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT---
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC---
Confidence            6       57999999997543     122333588999999999998887653    2257899999987643321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                         +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++........   ..       
T Consensus       170 -------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~-------  220 (266)
T 3o38_A          170 -------------------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS---EL-------  220 (266)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH---HH-------
Confidence                               2467999999999999988776   589999999999998864332110   00       


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       .-.+........+.+.+|+|.++.|
T Consensus       221 -~~~~~~~~~~~r~~~~~dva~~i~~  245 (266)
T 3o38_A          221 -LDRLASDEAFGRAAEPWEVAATIAF  245 (266)
T ss_dssp             -------CCTTSSCCCHHHHHHHHHH
T ss_pred             -HHHHHhcCCcCCCCCHHHHHHHHHH
Confidence             1112233345667889999998866

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.93  E-value=2.1e-25  Score=179.47  Aligned_cols=191  Identities=18%  Similarity=0.146  Sum_probs=139.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC-   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-   83 (249)
                      ||++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..  ..++.++.+|+++++++.++++.+ 
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~   70 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSE--------SKLSTVTNCL--SNNVGYRARDLASHQEVEQLFEQLD   70 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH--------HHHHHHHHTC--SSCCCEEECCTTCHHHHHHHHHSCS
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHH--hhccCeEeecCCCHHHHHHHHHHHh
Confidence            35899999999999999999999999999999987        5555443222  346789999999999999999864 


Q ss_pred             ---CEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeeccCCCccccCCCCCC
Q 025660           84 ---TGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (249)
Q Consensus        84 ---d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (249)
                         |+||||||....     ...+.++..+++|+.++.++++.+.+.-  ...+||++||..++.+.+            
T Consensus        71 ~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  138 (230)
T 3guy_A           71 SIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA------------  138 (230)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT------------
T ss_pred             hcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC------------
Confidence               899999997543     1223335789999999999999886541  123999999987653321            


Q ss_pred             chhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccc
Q 025660          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVM  230 (249)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (249)
                                +...|+.||.+.+.+.+.++.+.   |++++.|+||.+.++.......                    ..
T Consensus       139 ----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------------------~~  188 (230)
T 3guy_A          139 ----------QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK--------------------SL  188 (230)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------------
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC--------------------CC
Confidence                      24579999999999999988875   7999999999998876432100                    01


Q ss_pred             cccccchhhHHHhhhhc
Q 025660          231 NRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~~  247 (249)
                      ....++..+|+|.++.|
T Consensus       189 ~~~~~~~~~dvA~~i~~  205 (230)
T 3guy_A          189 DTSSFMSAEDAALMIHG  205 (230)
T ss_dssp             ----CCCHHHHHHHHHH
T ss_pred             CcccCCCHHHHHHHHHH
Confidence            23467788888888776

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.93  E-value=9.1e-26  Score=185.57  Aligned_cols=204  Identities=16%  Similarity=0.112  Sum_probs=147.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++.. .+.++.++.+|++|+++++++++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~   90 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDV--------SELDAARRALGEQFGTDVHTVAIDLAEPDAPAELAR   90 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            458999999999999999999999999999999986        443332 11111 23478999999999999888876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|++|||||....     ...+.++..+++|+.++.++++++.+.    +..++||++||..++.+.+    
T Consensus        91 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  166 (266)
T 4egf_A           91 RAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP----  166 (266)
T ss_dssp             HHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC----
Confidence                   68999999997653     122334578999999999988877542    2246999999987653321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++........ . .....     
T Consensus       167 ------------------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~-~~~~~-----  221 (266)
T 4egf_A          167 ------------------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD-E-AKSAP-----  221 (266)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS-H-HHHHH-----
T ss_pred             ------------------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC-h-HHHHH-----
Confidence                              2457999999999999888776   489999999999998753211100 0 11111     


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         +........+...+|+|.+++|
T Consensus       222 ---~~~~~p~~r~~~p~dva~~v~~  243 (266)
T 4egf_A          222 ---MIARIPLGRFAVPHEVSDAVVW  243 (266)
T ss_dssp             ---HHTTCTTSSCBCHHHHHHHHHH
T ss_pred             ---HHhcCCCCCCcCHHHHHHHHHH
Confidence               1122233456778899888766

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.93  E-value=6.9e-26  Score=188.89  Aligned_cols=206  Identities=14%  Similarity=0.042  Sum_probs=148.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..      ....+.+. .....+.++.++.+|++|+++++++++ 
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE------EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGG------HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc------hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence            4579999999999999999999999999999988740      01222221 111223578899999999998888775 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccC
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                            ++|++|||||....      ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+       
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~-------  194 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP-------  194 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT-------
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC-------
Confidence                  68999999997532      1223345899999999999999998753 135999999988654321       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccc
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK  225 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (249)
                                     +...|+.||.+.+.+.+.++.+.   |+++++|+||.|+++........          ......
T Consensus       195 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~----------~~~~~~  249 (294)
T 3r3s_A          195 ---------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT----------QDKIPQ  249 (294)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC----------GGGSTT
T ss_pred             ---------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC----------HHHHHH
Confidence                           14579999999999999888764   89999999999999752111000          000111


Q ss_pred             ccccccccccchhhHHHhhhhc
Q 025660          226 ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +........+...+|+|.+++|
T Consensus       250 ~~~~~p~~r~~~p~dvA~~v~~  271 (294)
T 3r3s_A          250 FGQQTPMKRAGQPAELAPVYVY  271 (294)
T ss_dssp             TTTTSTTSSCBCGGGGHHHHHH
T ss_pred             HHhcCCCCCCcCHHHHHHHHHH
Confidence            2233344567778888888765

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.93  E-value=9.7e-26  Score=192.56  Aligned_cols=196  Identities=16%  Similarity=0.087  Sum_probs=141.0

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhh--hhhccCCCCCCCeEEEEcC-CCChhhHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL--SFLKNLPGASERLRIFHAD-LSHPDGFD   77 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~D-l~~~~~~~   77 (249)
                      |++.+|+|||||||||||++++++|+++|++|++++|+.        +..  +.+...    .+++++.+| ++|++++.
T Consensus         1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~~l~~~----~~v~~v~~D~l~d~~~l~   68 (352)
T 1xgk_A            1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSL--------KGLIAEELQAI----PNVTLFQGPLLNNVPLMD   68 (352)
T ss_dssp             --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCS--------CSHHHHHHHTS----TTEEEEESCCTTCHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC--------ChhhHHHHhhc----CCcEEEECCccCCHHHHH
Confidence            554467899999999999999999999999999999987        222  223221    257899999 99999999


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                      ++++++|+|||+++....          ..|..+ +++++++++.+++++||++||.... .. .      +        
T Consensus        69 ~~~~~~d~Vi~~a~~~~~----------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~-~~-~------~--------  121 (352)
T 1xgk_A           69 TLFEGAHLAFINTTSQAG----------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHS-LY-G------P--------  121 (352)
T ss_dssp             HHHTTCSEEEECCCSTTS----------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGG-GT-S------S--------
T ss_pred             HHHhcCCEEEEcCCCCCc----------HHHHHH-HHHHHHHHHcCCccEEEEeCCcccc-cc-C------C--------
Confidence            999999999999975321          236666 9999999887546899999997520 00 0      0        


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc-cc-cccccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK-LK-ICCVMNRSHT  235 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~  235 (249)
                           .+.+.|+.||..+|.+++.    .+++++++||+ +||+.........+.  ......+.. +. +..+++.++|
T Consensus       122 -----~~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~  189 (352)
T 1xgk_A          122 -----WPAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQ--MELMPDGTFEWHAPFDPDIPLPW  189 (352)
T ss_dssp             -----CCCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSSCB--EEECTTSCEEEEESSCTTSCEEE
T ss_pred             -----CCCccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhccccccc--ccccCCCceEEeeccCCCCceee
Confidence                 1235699999999999876    48999999987 688865432111110  000112222 22 3557788899


Q ss_pred             chh-hHHHhhhhc
Q 025660          236 LFV-YAIAFAFAF  247 (249)
Q Consensus       236 i~v-~d~a~a~~~  247 (249)
                      +|+ +|+|++++.
T Consensus       190 i~v~~Dva~ai~~  202 (352)
T 1xgk_A          190 LDAEHDVGPALLQ  202 (352)
T ss_dssp             ECHHHHHHHHHHH
T ss_pred             EecHHHHHHHHHH
Confidence            999 999998754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.93  E-value=1.5e-25  Score=183.16  Aligned_cols=168  Identities=18%  Similarity=0.206  Sum_probs=130.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++  
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   73 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYND--------ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQA   73 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999986        333322 1221123468899999999999988887  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++++.+.+.    +..++||++||..++.+.+      
T Consensus        74 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  147 (256)
T 1geg_A           74 RKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP------  147 (256)
T ss_dssp             HHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC------
Confidence                 78999999997543     112333478999999998888776542    2136999999987643321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                      +...|+.||...+.+.+.++.+   +|+++++|+||.+.++.
T Consensus       148 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  189 (256)
T 1geg_A          148 ----------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM  189 (256)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch
Confidence                            1357999999999999888765   48999999999999875

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=1.8e-25  Score=185.50  Aligned_cols=227  Identities=14%  Similarity=0.072  Sum_probs=153.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccC----Cchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHR----NSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.......    ..+..+.+ .+....+.++.++.+|++|++++.+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            568999999999999999999999999999999873111000    01122211 1112224578999999999999888


Q ss_pred             HHc-------CCCEEEEccccCCCC---CCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCcccc
Q 025660           79 AIA-------GCTGVLHVATPVDFE---DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                      +++       ++|+||||||.....   ..+.++..+++|+.++.++++++.+.- ..++||++||..++.....  .+.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~  166 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ--PPG  166 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC--CC-
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc--ccc
Confidence            876       689999999986541   223345899999999999999998752 2469999999877554322  112


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC---
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN---  221 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~---  221 (249)
                      .+..+.         .+...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++.....      .........   
T Consensus       167 ~~~~~~---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~~~~~~~~~~  231 (287)
T 3pxx_A          167 AGGPQG---------PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA------PMYRQFRPDLEA  231 (287)
T ss_dssp             ----CH---------HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH------HHHHHHCTTSSS
T ss_pred             ccccCC---------CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc------chhhhhcccccc
Confidence            222110         123579999999999999888775   89999999999999876431      011111100   


Q ss_pred             Cc-----cc-ccccccccccchhhHHHhhhhc
Q 025660          222 VK-----LK-ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~-----~~-~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +.     .. .........+.+.+|+|.+++|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~f  263 (287)
T 3pxx_A          232 PSRADALLAFPAMQAMPTPYVEASDISNAVCF  263 (287)
T ss_dssp             CCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHH
T ss_pred             chhHHHHhhhhhhcccCCCCCCHHHHHhhHhe
Confidence            00     00 0111111678899999999876

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.93  E-value=4.3e-26  Score=190.73  Aligned_cols=212  Identities=17%  Similarity=0.113  Sum_probs=144.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|.+++.++++ 
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~  101 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQ--------PALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADE  101 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999987        444332 2222234578999999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+..++||++||..++.+.+     
T Consensus       102 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  176 (301)
T 3tjr_A          102 AFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA-----  176 (301)
T ss_dssp             HHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT-----
T ss_pred             HHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-----
Confidence                  68999999997643     12233358899999999999888753    33246999999987654321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++.......  ...........+.
T Consensus       177 -----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~  237 (301)
T 3tjr_A          177 -----------------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSER--IRGADYGMSATPE  237 (301)
T ss_dssp             -----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHH--HC-----------
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccccccc--ccchhhccccChh
Confidence                             24579999999998888887664   8999999999998875321100  0000000001111


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ..+........++..+|+|++++.
T Consensus       238 ~~~~~~~~~~~~~~pedvA~~i~~  261 (301)
T 3tjr_A          238 GAFGPLPTQDESVSADDVARLTAD  261 (301)
T ss_dssp             -----------CCCHHHHHHHHHH
T ss_pred             hhccccccccCCCCHHHHHHHHHH
Confidence            122333444578899999988754

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.93  E-value=1.2e-25  Score=185.46  Aligned_cols=205  Identities=16%  Similarity=0.177  Sum_probs=141.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|+++.++..       +..+.+ ..+...+.++.++.+|++|++++.++++ 
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   97 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANR-------EAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSA   97 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCh-------hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            4578999999999999999999999999988744431       333322 2222234578899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-C-----CCChHHHhhhhHHhHHHHHHHHHHhc------CCcceEEEEcccceeeccCCC
Q 025660           82 ------GCTGVLHVATPVDF-E-----DKEPEEVITQRAINGTLGILKSCLKS------GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-~-----~~~~~~~~~~~n~~~t~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~  143 (249)
                            ++|+||||||.... .     ..+.++..+++|+.++.++++.+.+.      +..++||++||..++.+... 
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  176 (272)
T 4e3z_A           98 VDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT-  176 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT-
T ss_pred             HHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC-
Confidence                  68999999997643 1     22333588999999999988877543      12468999999887543311 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++.......   .....    
T Consensus       177 --------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~----  229 (272)
T 4e3z_A          177 --------------------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGL---PDRAR----  229 (272)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------------
T ss_pred             --------------------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCC---hHHHH----
Confidence                                13469999999999998887764   8999999999999987543100   00011    


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                          .+........+...+|+|.++.|
T Consensus       230 ----~~~~~~~~~~~~~~edvA~~i~~  252 (272)
T 4e3z_A          230 ----EMAPSVPMQRAGMPEEVADAILY  252 (272)
T ss_dssp             --------CCTTSSCBCHHHHHHHHHH
T ss_pred             ----HHhhcCCcCCCcCHHHHHHHHHH
Confidence                11122233456678999988866

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.93  E-value=2.4e-25  Score=182.38  Aligned_cols=205  Identities=18%  Similarity=0.112  Sum_probs=141.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++++..       +..+. ..++...+.++.++.+|++|++++.++++ 
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAA-------EGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISA   79 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSC-------HHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999855541       22222 22222334578899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccC
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                            ++|++|||||....      ...+.++..+++|+.++.++++++.+.- ..++||++||..++....       
T Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  152 (259)
T 3edm_A           80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGG-------  152 (259)
T ss_dssp             HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCS-------
T ss_pred             HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCC-------
Confidence                  68999999986522      1122335889999999999999998753 135999999987641110       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccc
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI  226 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (249)
                                    .+...|+.||.+.+.+.+.++.+.  ++++++|+||.|.++........   ...        -.+
T Consensus       153 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~---~~~--------~~~  207 (259)
T 3edm_A          153 --------------PGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKP---EVR--------ERV  207 (259)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--------------------------
T ss_pred             --------------CCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccCh---HHH--------HHH
Confidence                          124579999999999999888775  39999999999999865432100   000        111


Q ss_pred             cccccccccchhhHHHhhhhc
Q 025660          227 CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ........+...+|+|.++.|
T Consensus       208 ~~~~p~~r~~~pedva~~v~~  228 (259)
T 3edm_A          208 AGATSLKREGSSEDVAGLVAF  228 (259)
T ss_dssp             -------CCBCHHHHHHHHHH
T ss_pred             HhcCCCCCCcCHHHHHHHHHH
Confidence            223344567788899888766

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.93  E-value=1.2e-25  Score=184.09  Aligned_cols=204  Identities=15%  Similarity=0.071  Sum_probs=145.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEc-CCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR-SELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++| +.        +..+.+ .++...+.++.++.+|++|++++.++++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   77 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE--------DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCCh--------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999999 44        333222 1221123467889999999999888876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|+||||||....     ...+.++..+++|+.++.++++.+.+.    +..++||++||..++.+.     
T Consensus        78 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  152 (261)
T 1gee_A           78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-----  152 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC-----
Confidence                   78999999997543     112233478999999999888876543    214699999997653221     


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                       .+...|+.||.+.+.+.+.++.+.   +++++++|||.++++.......  .......+..  
T Consensus       153 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~--  211 (261)
T 1gee_A          153 -----------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA--DPEQRADVES--  211 (261)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH--SHHHHHHHHT--
T ss_pred             -----------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc--ChhHHHHHHh--
Confidence                             124679999999998888877664   8999999999999986421100  0011111111  


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ......+.+.+|+|.+++|
T Consensus       212 ------~~~~~~~~~~~dva~~~~~  230 (261)
T 1gee_A          212 ------MIPMGYIGEPEEIAAVAAW  230 (261)
T ss_dssp             ------TCTTSSCBCHHHHHHHHHH
T ss_pred             ------cCCCCCCcCHHHHHHHHHH
Confidence                  1123467889999988765

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.93  E-value=1.8e-25  Score=180.56  Aligned_cols=191  Identities=22%  Similarity=0.147  Sum_probs=140.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+...  .++.++.+|++|+++++++++  
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~   71 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRY--------QRLQQQELLLG--NAVIGIVADLAHHEDVDVAFAAA   71 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHG--GGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999987        44444322211  258899999999999888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                           .+|++|||||....     ...+.++..+++|+.++.++++++.+.  ...++||++||..++.+.+.       
T Consensus        72 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  144 (235)
T 3l6e_A           72 VEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKAN-------  144 (235)
T ss_dssp             HHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSS-------
T ss_pred             HHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCC-------
Confidence                 57999999997543     122334588999999998888887543  11249999999876543211       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccc
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI  226 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (249)
                                     ...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++.......                  
T Consensus       145 ---------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------------  191 (235)
T 3l6e_A          145 ---------------ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH------------------  191 (235)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------
T ss_pred             ---------------CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC------------------
Confidence                           3579999999999999988764   7999999999998886432100                  


Q ss_pred             cccccccccchhhHHHhhhhc
Q 025660          227 CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         .....++..+|+|.++.|
T Consensus       192 ---~~~~~~~~pedvA~~v~~  209 (235)
T 3l6e_A          192 ---VDPSGFMTPEDAAAYMLD  209 (235)
T ss_dssp             --------CBCHHHHHHHHHH
T ss_pred             ---CCCcCCCCHHHHHHHHHH
Confidence               011146778888888765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.93  E-value=1.7e-25  Score=184.52  Aligned_cols=199  Identities=15%  Similarity=0.101  Sum_probs=138.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+....  +.++.++.+|++|++++.++++  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRL--------DALQETAAEI--GDDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH--TSCCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987        4444332211  2467899999999999988886  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc----C-CcceEEEEcccceeeccCCCcc
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS----G-TVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                           ++|+||||||....      ...+.++..+++|+.++.++++++.+.    + ..++||++||..++.+.+    
T Consensus        97 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~----  172 (272)
T 4dyv_A           97 VEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP----  172 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT----
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC----
Confidence                 68999999997532      122333588999999988888776542    2 136999999987653321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||.+.+.+.+.++.+   +++++++|+||.|.++........    ...      
T Consensus       173 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~------  224 (272)
T 4dyv_A          173 ------------------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG----VPQ------  224 (272)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc----chh------
Confidence                              2457999999999999988776   489999999999999865332110    000      


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         .........++..+|+|.+++|
T Consensus       225 ---~~~~~~~~~~~~pedvA~~v~f  246 (272)
T 4dyv_A          225 ---ADLSIKVEPVMDVAHVASAVVY  246 (272)
T ss_dssp             --------------CHHHHHHHHHH
T ss_pred             ---hhhcccccCCCCHHHHHHHHHH
Confidence               0011122347789999999876

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.93  E-value=2.8e-25  Score=182.48  Aligned_cols=195  Identities=19%  Similarity=0.141  Sum_probs=144.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..        +          +.++.++.+|++|++++.++++  
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--------~----------~~~~~~~~~Dl~~~~~v~~~~~~~   68 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP--------G----------EAKYDHIECDVTNPDQVKASIDHI   68 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCC--------C----------SCSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcc--------c----------CCceEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999871        1          2357889999999999888876  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+      
T Consensus        69 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  141 (264)
T 2dtx_A           69 FKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIITK------  141 (264)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCCC------
Confidence                 689999999975431     1223458899999998888887754    33 57999999987643221      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcC--CcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC---
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG--LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV---  222 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~---  222 (249)
                                      +...|+.||.+.+.+.+.++.+.+  +++++|+||.+.++....        +.....+..   
T Consensus       142 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~--------~~~~~~~~~~~~  197 (264)
T 2dtx_A          142 ----------------NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK--------AAELEVGSDPMR  197 (264)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH--------HHHHHHCSCHHH
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh--------hhhcccccCchh
Confidence                            245799999999999999887754  999999999998764211        100000000   


Q ss_pred             ---c-ccccccccccccchhhHHHhhhhc
Q 025660          223 ---K-LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ---~-~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         . ..+........+++.+|+|.+++|
T Consensus       198 ~~~~~~~~~~~~p~~~~~~p~dvA~~v~~  226 (264)
T 2dtx_A          198 IEKKISEWGHEHPMQRIGKPQEVASAVAF  226 (264)
T ss_dssp             HHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence               0 011122334568999999999876

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.93  E-value=1.1e-25  Score=184.57  Aligned_cols=212  Identities=15%  Similarity=0.063  Sum_probs=147.2

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+..    ...+..+.+...  .+.++.++.+|++|++++.++++ 
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~   85 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAA----DAVEVTEKVGKE--FGVKTKAYQCDVSNTDIVTKTIQQ   85 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCT----THHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcch----hhHHHHHHHHHh--cCCeeEEEEeeCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999751    001111112111  12468899999999998888776 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            .+|+||||||.....     ..+.++..+++|+.++.++++++.+.    +..++||++||..++.+.....  
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~--  163 (265)
T 1h5q_A           86 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL--  163 (265)
T ss_dssp             HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET--
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc--
Confidence                  389999999975431     12233478999999999999987643    3247999999987643321100  


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                          .+         ..|...|+.||.+.+.+++.++.+.   +++++++|||.++++......+    ........   
T Consensus       164 ----~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~---  223 (265)
T 1h5q_A          164 ----NG---------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK----KIRDHQAS---  223 (265)
T ss_dssp             ----TE---------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH----HHHHHHHH---
T ss_pred             ----cc---------cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccch----hHHHHHHh---
Confidence                00         1235679999999999999887763   8999999999999987543211    11111111   


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           ......+.+.+|+|.++.|
T Consensus       224 -----~~~~~~~~~~~dva~~~~~  242 (265)
T 1h5q_A          224 -----NIPLNRFAQPEEMTGQAIL  242 (265)
T ss_dssp             -----TCTTSSCBCGGGGHHHHHH
T ss_pred             -----cCcccCCCCHHHHHHHHHh
Confidence                 1122357788888888765

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=1.8e-25  Score=185.78  Aligned_cols=168  Identities=16%  Similarity=0.164  Sum_probs=133.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhhhhc-cCC--CCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLK-NLP--GASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~-~~~--~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++|++|||||+|+||++++++|+++|+   .|++++|+.        +..+.+. ++.  ..+.++.++.+|++|++++.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~  103 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRL--------EKLEELKKTIDQEFPNAKVHVAQLDITQAEKIK  103 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCH--------HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHH
Confidence            457999999999999999999999998   999999987        4444332 111  12346889999999999999


Q ss_pred             HHHc-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeecc
Q 025660           78 AAIA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~  140 (249)
                      ++++       ++|+||||||....      ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.
T Consensus       104 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~  182 (287)
T 3rku_A          104 PFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAY  182 (287)
T ss_dssp             HHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCC
Confidence            9987       47999999997542      1223345889999999999888874    445 6899999998764332


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                      +                      +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++.
T Consensus       183 ~----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  225 (287)
T 3rku_A          183 P----------------------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF  225 (287)
T ss_dssp             T----------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred             C----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence            1                      2457999999999999998887   48999999999999975

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=1.2e-25  Score=183.67  Aligned_cols=203  Identities=14%  Similarity=0.145  Sum_probs=144.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|+||||||+|+||++++++|+++|++|++++++..    .  .....+.+....+.++.++.+|++|.+++.++++  
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS----P--RRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTC----S--SHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH----H--HHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence            5689999999999999999999999999999884431    0  1112222222223468899999999999888876  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||.....     ..+.++..+++|+.++.++++.+    ++.+ .++||++||..++.+..      
T Consensus        86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  158 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF------  158 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCS------
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCC------
Confidence                 679999999976531     12333488999999987776665    4455 67999999987654321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                      +...|+.||.+.+.+.+.++.+   .|+++++++||.+.++......+.....+.         
T Consensus       159 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---------  213 (256)
T 3ezl_A          159 ----------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIV---------  213 (256)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHH---------
T ss_pred             ----------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHH---------
Confidence                            2467999999999998888776   489999999999998865432221111111         


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         .......+...+|+|.++.|
T Consensus       214 ---~~~~~~~~~~~~dva~~~~~  233 (256)
T 3ezl_A          214 ---ATIPVRRLGSPDEIGSIVAW  233 (256)
T ss_dssp             ---HHSTTSSCBCHHHHHHHHHH
T ss_pred             ---hcCCCCCCcCHHHHHHHHHH
Confidence               11233456678888887765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=5.7e-26  Score=187.35  Aligned_cols=169  Identities=17%  Similarity=0.117  Sum_probs=130.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~  101 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK--------HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK  101 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH--------HHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH
Confidence            457999999999999999999999999999999986        333322 1221223468899999999998888876 


Q ss_pred             ------CCCEEEEccccCCCCC-----CChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDFED-----KEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||......     .+.++..+++|+.++.++++.+.    +.+ .++||++||..++.+.+     
T Consensus       102 ~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----  175 (272)
T 1yb1_A          102 VKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVP-----  175 (272)
T ss_dssp             HHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHH-----
T ss_pred             HHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCC-----
Confidence                  6899999999764311     12234789999999877777664    345 68999999987654321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc------CCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH------GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~vrp~~v~g~~~  203 (249)
                                       +...|+.||.+.+.+++.++.+.      ++++++|+||.+.++..
T Consensus       176 -----------------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~  221 (272)
T 1yb1_A          176 -----------------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI  221 (272)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcc
Confidence                             13579999999999998887764      79999999999998863

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.93  E-value=3.9e-25  Score=180.91  Aligned_cols=167  Identities=18%  Similarity=0.203  Sum_probs=131.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchh--hhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD--LSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +|++|||||+|+||++++++|+++|++|++++|+.        +.  .+.+ .++...+.++.++.+|++|++++.++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   73 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQ--------QEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAID   73 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGG--------GHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--------chHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            57899999999999999999999999999999986        33  2222 2222223468899999999999888876


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCc-ceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTV-KRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~-~~~v~~SS~~~~~~~~~~~  144 (249)
                             ++|+||||||.....     ..+.++..+++|+.++.++++++.+    .+ . ++||++||..++.+.+   
T Consensus        74 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---  149 (258)
T 3a28_C           74 EAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGFP---  149 (258)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCCT---
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCCC---
Confidence                   689999999975431     2233358899999999998887765    34 4 7999999987643321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                         +...|+.||...+.+.+.++.+   +++++++|+||.+.++.
T Consensus       150 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  191 (258)
T 3a28_C          150 -------------------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM  191 (258)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH
T ss_pred             -------------------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh
Confidence                               2457999999999999888766   38999999999998875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.93  E-value=4.2e-25  Score=181.86  Aligned_cols=203  Identities=17%  Similarity=0.152  Sum_probs=148.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+..       +.... +......+.++.++.+|++|++++.++++ 
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   96 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN-------DHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEK   96 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCH-------HHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCch-------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999986541       22222 22222334578999999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++.+.+    .+ .++||++||..++.+..     
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  170 (269)
T 3gk3_A           97 VLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAF-----  170 (269)
T ss_dssp             HHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-----
T ss_pred             HHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCC-----
Confidence                  68999999997643     12233357899999999988887754    44 57999999987654331     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+.   |+++++++||.|.++........       ..    .
T Consensus       171 -----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-------~~----~  222 (269)
T 3gk3_A          171 -----------------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD-------VL----E  222 (269)
T ss_dssp             -----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------------
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh-------HH----H
Confidence                             24579999999999888887763   89999999999999875432110       00    0


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ..+........+...+|+|.++.|
T Consensus       223 ~~~~~~~~~~~~~~p~dvA~~v~~  246 (269)
T 3gk3_A          223 AKILPQIPVGRLGRPDEVAALIAF  246 (269)
T ss_dssp             CCSGGGCTTSSCBCHHHHHHHHHH
T ss_pred             HHhhhcCCcCCccCHHHHHHHHHH
Confidence            112233445567789999998865

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.93  E-value=6.1e-25  Score=180.63  Aligned_cols=201  Identities=13%  Similarity=0.148  Sum_probs=146.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +++++|||||+|+||++++++|+++|++|+++.++..       +..+ .+.++...+.++.++.+|++|++++.++++ 
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDA-------AGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCch-------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4578999999999999999999999999988765541       2222 222222234578999999999999888876 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH-----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL-----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            .+|+||||||.....     ..+.++..+++|+.++.++++.+.     +.+ .++||++||..++.+.+    
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----  172 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGNR----  172 (267)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCCT----
T ss_pred             HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCCC----
Confidence                  689999999976531     223335889999999999988764     334 67999999987654432    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        +...|+.||.+.+.+.+.++.+.   ++++++++||.|.++.....    .........   
T Consensus       173 ------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~---  227 (267)
T 4iiu_A          173 ------------------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMS---  227 (267)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHH---
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHh---
Confidence                              24579999998888888777664   89999999999999876432    112222221   


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ......+...+|+|.++.|
T Consensus       228 ------~~p~~~~~~~edva~~~~~  246 (267)
T 4iiu_A          228 ------MIPMKRMGQAEEVAGLASY  246 (267)
T ss_dssp             ------TCTTCSCBCHHHHHHHHHH
T ss_pred             ------cCCCCCCcCHHHHHHHHHH
Confidence                  1223456778898888765

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.93  E-value=1.8e-25  Score=183.90  Aligned_cols=193  Identities=18%  Similarity=0.087  Sum_probs=137.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHH-CCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++++||||||+|+||++++++|++ +|++|++++|+.        ++.+.+ .++...+.++.++.+|++|.+++.++++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   74 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV--------TRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRD   74 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSH--------HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCCh--------HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHH
Confidence            568999999999999999999999 999999999986        333221 2221123468899999999999988887


Q ss_pred             -------CCCEEEEccccCCCCC-----CChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCC-----
Q 025660           82 -------GCTGVLHVATPVDFED-----KEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKD-----  143 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~-----  143 (249)
                             ++|+||||||......     .+..+..+++|+.++.++++++.+.. ..++||++||..++++....     
T Consensus        75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~  154 (276)
T 1wma_A           75 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQ  154 (276)
T ss_dssp             HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHH
T ss_pred             HHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHH
Confidence                   7899999999764311     12234789999999999999998762 13599999998776431110     


Q ss_pred             ----ccccCCCCCCch--hHh--------hhcCCCCchHHHHHHHHHHHHHHHHHH-------cCCcEEEeecCeEeCCC
Q 025660          144 ----VDMMDETFWSDV--DYI--------RKLDSWGKSYAISKTLTERAALEFAEE-------HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       144 ----~~~~~e~~~~~~--~~~--------~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~~vrp~~v~g~~  202 (249)
                          ..+++|+.+...  .+.        .....|.+.|+.||.+.+.+++.++.+       .++++++|+||.|.++.
T Consensus       155 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~  234 (276)
T 1wma_A          155 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  234 (276)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             hhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence                011222211000  000        000123478999999999888877665       48999999999999987


Q ss_pred             CC
Q 025660          203 IC  204 (249)
Q Consensus       203 ~~  204 (249)
                      ..
T Consensus       235 ~~  236 (276)
T 1wma_A          235 AG  236 (276)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=4.3e-25  Score=180.18  Aligned_cols=171  Identities=15%  Similarity=0.085  Sum_probs=133.3

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCe-EEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh-hhHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDA   78 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~~~~   78 (249)
                      |..++|+++||||+|+||++++++|+++|++ |++++|+..      .+..+.+.+... +.++.++.+|++|+ +++.+
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~------~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~   73 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN------PTALAELKAINP-KVNITFHTYDVTVPVAESKK   73 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC------HHHHHHHHHHCT-TSEEEEEECCTTSCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch------HHHHHHHHHhCC-CceEEEEEEecCCChHHHHH
Confidence            6667789999999999999999999999997 999999861      122333322211 34688999999998 88877


Q ss_pred             HHc-------CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC------CcceEEEEcccceeeccCCCcc
Q 025660           79 AIA-------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG------TVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~------~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                      +++       ++|+||||||....  +++. ..+++|+.++.++++++.+.-      ..++||++||..++.+.+    
T Consensus        74 ~~~~~~~~~g~id~lv~~Ag~~~~--~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  146 (254)
T 1sby_A           74 LLKKIFDQLKTVDILINGAGILDD--HQIE-RTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH----  146 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCT--TCHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHHHhcCCCCEEEECCccCCH--HHHh-hhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC----
Confidence            776       68999999997533  4444 899999999999999886431      136899999987653321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                        +...|+.||.+.+.+.+.++.+   +++++++|+||.+.++..
T Consensus       147 ------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~  189 (254)
T 1sby_A          147 ------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV  189 (254)
T ss_dssp             ------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHH
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccc
Confidence                              1457999999999999887765   589999999999999864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.93  E-value=2.5e-25  Score=181.93  Aligned_cols=200  Identities=20%  Similarity=0.156  Sum_probs=142.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++|++|||||+|+||++++++|+++|++|++++|+.        +....  +.   +.++.++.+|++|++++.+++
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~--~~---~~~~~~~~~D~~~~~~v~~~~   71 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG--------EDVVA--DL---GDRARFAAADVTDEAAVASAL   71 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC--------HHHHH--HT---CTTEEEEECCTTCHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch--------HHHHH--hc---CCceEEEECCCCCHHHHHHHH
Confidence            444678999999999999999999999999999999976        32221  11   246889999999999998888


Q ss_pred             c------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhc-----------CCcceEEEEccc
Q 025660           81 A------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-----------GTVKRVVYTSSN  134 (249)
Q Consensus        81 ~------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~-----------~~~~~~v~~SS~  134 (249)
                      +      ++|++|||||....         ...+.++..+++|+.++.++++++.+.           +..++||++||.
T Consensus        72 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  151 (257)
T 3tl3_A           72 DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASV  151 (257)
T ss_dssp             HHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCC
T ss_pred             HHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcch
Confidence            7      79999999997432         112334588999999999998887642           114689999998


Q ss_pred             ceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccH
Q 025660          135 AAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSV  211 (249)
Q Consensus       135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~  211 (249)
                      .++.+.+.                      ...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++.......   
T Consensus       152 ~~~~~~~~----------------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---  206 (257)
T 3tl3_A          152 AAFDGQIG----------------------QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPE---  206 (257)
T ss_dssp             C--CCHHH----------------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CH---
T ss_pred             hhcCCCCC----------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccH---
Confidence            76543211                      357999999999888888776   48999999999999987543211   


Q ss_pred             HHHHHHHcCCCcccccccccc-cccchhhHHHhhhhc
Q 025660          212 RSSLALILGNVKLKICCVMNR-SHTLFVYAIAFAFAF  247 (249)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~-~~~i~v~d~a~a~~~  247 (249)
                       ........        .... ..+...+|+|.++.|
T Consensus       207 -~~~~~~~~--------~~~~~~r~~~p~dva~~v~~  234 (257)
T 3tl3_A          207 -EARASLGK--------QVPHPSRLGNPDEYGALAVH  234 (257)
T ss_dssp             -HHHHHHHH--------TSSSSCSCBCHHHHHHHHHH
T ss_pred             -HHHHHHHh--------cCCCCCCccCHHHHHHHHHH
Confidence             11111111        1112 457788899988776

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.93  E-value=1.3e-24  Score=175.87  Aligned_cols=166  Identities=17%  Similarity=0.126  Sum_probs=131.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      .|+||||||+++||++++++|+++|++|++++|++        ++.+.+.+.   ..++..+++|++|+++++++++   
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~--------~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~   70 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE--------KRSADFAKE---RPNLFYFHGDVADPLTLKKFVEYAM   70 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHTT---CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHh---cCCEEEEEecCCCHHHHHHHHHHHH
Confidence            37899999999999999999999999999999987        555544332   3468899999999998888876   


Q ss_pred             ----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                          ++|++|||||....     ...+.++..+++|+.++..+.+++.+.   + .+++|++||..+..+.+.       
T Consensus        71 ~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~-------  142 (247)
T 3ged_A           71 EKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPD-------  142 (247)
T ss_dssp             HHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTT-------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCC-------
Confidence                58999999997654     122334589999999998888776542   3 479999999876543322       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~  204 (249)
                                     ...|+.||.....+.+.++.+.  +++++.|.||.|.++...
T Consensus       143 ---------------~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~  184 (247)
T 3ged_A          143 ---------------SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ  184 (247)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--
T ss_pred             ---------------CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH
Confidence                           3579999998888887777664  799999999999887654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.93  E-value=5e-25  Score=181.15  Aligned_cols=195  Identities=15%  Similarity=0.110  Sum_probs=143.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +...          ....+.+|+++.+++.++++  
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~--------~~~~----------~~~~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAV--------AGIA----------ADLHLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCC--------TTSC----------CSEECCCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHH----------hhhccCcCCCCHHHHHHHHHHH
Confidence            458899999999999999999999999999999986        1111          11345799999988877765  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.+      
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------  161 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGP------  161 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCT------
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCC------
Confidence                 68999999998653     122334588999999999999887    4445 68999999987653321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCC---CccHHHHHHHHcCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF---AGSVRSSLALILGN  221 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~---~~~~~~~~~~~~~~  221 (249)
                                      +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++......   .........     
T Consensus       162 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-----  220 (266)
T 3uxy_A          162 ----------------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVA-----  220 (266)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHH-----
T ss_pred             ----------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHH-----
Confidence                            24579999999999999887764   899999999999987532100   000000001     


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         .+........+...+|+|.++.|
T Consensus       221 ---~~~~~~p~~r~~~pedvA~~v~~  243 (266)
T 3uxy_A          221 ---ELGRTVPLGRIAEPEDIADVVLF  243 (266)
T ss_dssp             ---HHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             ---HHHhcCCCCCCcCHHHHHHHHHH
Confidence               12233445678889999998876

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.93  E-value=3.3e-25  Score=180.76  Aligned_cols=173  Identities=23%  Similarity=0.243  Sum_probs=133.5

Q ss_pred             CCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ..++|++|||||+++||++++++|+++|++|++.+|+.        +..+.++++...+.+...+.+|++|+++++++++
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~   75 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHA--------PDGAFLDALAQRQPRATYLPVELQDDAQCRDAVA   75 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------CCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCc--------ccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHH
Confidence            34678999999999999999999999999999999987        2223333222334578899999999998888776


Q ss_pred             -------CCCEEEEccccCCC----CCCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -------GCTGVLHVATPVDF----EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -------~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                             ++|++|||||....    ...+.++..+++|+.++.++.+++.+.   + .++||++||..+..+.+.     
T Consensus        76 ~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~-----  149 (258)
T 4gkb_A           76 QTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGN-----  149 (258)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSS-----
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCC-----
Confidence                   58999999997543    122334588999999988877766432   2 379999999887544322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                       ...|+.||.....+.+.++.+   +|++++.|.||.|.+|....
T Consensus       150 -----------------~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~  193 (258)
T 4gkb_A          150 -----------------TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRN  193 (258)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC--
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhh
Confidence                             357999999888888877766   48999999999999987543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.93  E-value=5.6e-25  Score=178.93  Aligned_cols=171  Identities=19%  Similarity=0.193  Sum_probs=131.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~   77 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRV--------EKLRALGDELTAAGAKVHVLELDVADRQGVDAAVAS   77 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        443332 1221123468899999999999888876 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeeccCCCccccC
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                            ++|+||||||.....     ..+.++..+++|+.++.++++++.+.-  ..++||++||..++.+.+       
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  150 (247)
T 2jah_A           78 TVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVR-------  150 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCT-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCC-------
Confidence                  689999999975431     122334789999999999988876431  017999999987643321       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                     +...|+.||...+.+.+.++.+   +|+++++|+||.+.++...
T Consensus       151 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  194 (247)
T 2jah_A          151 ---------------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRG  194 (247)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGG
T ss_pred             ---------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchh
Confidence                           1457999999999888887765   4899999999999998643

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.93  E-value=2.6e-25  Score=181.47  Aligned_cols=202  Identities=15%  Similarity=0.113  Sum_probs=143.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..  +.++.++.+|++|++++.++++  
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~   74 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE--------AAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAV   74 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999986        4443332111  2468899999999998888776  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++..+.+.+.    +.+  ++||++||..++.+.+      
T Consensus        75 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~------  146 (253)
T 1hxh_A           75 QRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIE------  146 (253)
T ss_dssp             HHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCC------
Confidence                 47999999997543     1122335889999988777666554    333  7999999987643221      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---c--CCcEEEeecCeEeCCCCCCCC-CccHHHHHHHHcCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---H--GLDLVTLIPSMVVGPFICPKF-AGSVRSSLALILGN  221 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~--~~~~~~vrp~~v~g~~~~~~~-~~~~~~~~~~~~~~  221 (249)
                                      +...|+.||...+.+.+.++.+   +  ++++++||||.+++|...... .....   ..+...
T Consensus       147 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~  207 (253)
T 1hxh_A          147 ----------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK---EMVLHD  207 (253)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH---HHHBCB
T ss_pred             ----------------CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhH---HHHhhh
Confidence                            2457999999999888887765   3  899999999999998532100 00000   001110


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .     .......+...+|+|.++.|
T Consensus       208 ~-----~~~p~~~~~~~~dvA~~~~~  228 (253)
T 1hxh_A          208 P-----KLNRAGRAYMPERIAQLVLF  228 (253)
T ss_dssp             T-----TTBTTCCEECHHHHHHHHHH
T ss_pred             h-----ccCccCCCCCHHHHHHHHHH
Confidence            0     01223457889999998876

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.93  E-value=6.8e-26  Score=186.40  Aligned_cols=169  Identities=20%  Similarity=0.176  Sum_probs=131.3

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCC--CCCCCeEEEEcCCCChhhHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP--GASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++.  .....+..+.+|+++++++.++
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   79 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRRE--------ENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDV   79 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHH
Confidence            3568999999999999999999999999999999986        333322 1111  1124578899999999999988


Q ss_pred             Hc---CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           80 IA---GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        80 ~~---~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                      ++   ++|++|||||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+      
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  152 (267)
T 3t4x_A           80 IEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQ------  152 (267)
T ss_dssp             HHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCT------
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCC------
Confidence            87   689999999976441     123334789999999777766554    445 68999999987653321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                                      +...|+.||.+.+.+.+.++.+.   ++++++|+||.+.++.
T Consensus       153 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  194 (267)
T 3t4x_A          153 ----------------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG  194 (267)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc
Confidence                            24679999999999999988775   6999999999998874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.93  E-value=4e-25  Score=182.72  Aligned_cols=218  Identities=16%  Similarity=0.091  Sum_probs=149.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcc-----cCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE-----HRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.....     .+..+..+.+ ..+...+.++.++.+|++|++++.
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            4689999999999999999999999999999998531000     0111222222 222223457889999999999988


Q ss_pred             HHHc-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccC
Q 025660           78 AAIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~  141 (249)
                      ++++       ++|++|||||.....     ..+.++..+++|+.++.++++++.+    .+..++||++||..++.+.+
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  169 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP  169 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCC
Confidence            8876       589999999986541     2233458899999999998887543    33246999999987653321


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHH
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~  218 (249)
                                            ....|+.||.+.+.+.+.++.+.   |+++++|+||.|.++.....   .........
T Consensus       170 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~  224 (277)
T 3tsc_A          170 ----------------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD---MVTAVGQAM  224 (277)
T ss_dssp             ----------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH---HHHHHHHHH
T ss_pred             ----------------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch---hhhhhhhcc
Confidence                                  14579999999999999888764   89999999999999864321   111111111


Q ss_pred             cCCC-ccc-ccccccccccchhhHHHhhhhc
Q 025660          219 LGNV-KLK-ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~-~~~-~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ...+ ... +...... .+...+|+|.+++|
T Consensus       225 ~~~~~~~~~~~~~~p~-r~~~pedvA~~v~~  254 (277)
T 3tsc_A          225 ETNPQLSHVLTPFLPD-WVAEPEDIADTVCW  254 (277)
T ss_dssp             HTCGGGTTTTCCSSSC-SCBCHHHHHHHHHH
T ss_pred             cccHHHHHHhhhccCC-CCCCHHHHHHHHHH
Confidence            1111 111 1122222 47889999999876

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.93  E-value=5.4e-26  Score=187.29  Aligned_cols=208  Identities=14%  Similarity=0.090  Sum_probs=148.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++++..       +..+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   89 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANST-------KDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQ   89 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999887651       222222 2222234578999999999999888876 


Q ss_pred             ------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCC
Q 025660           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                            ++|++|||||.....     ..+.++..+++|+.++.++++++.+.- ..++||++||.......         
T Consensus        90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  160 (270)
T 3is3_A           90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS---------  160 (270)
T ss_dssp             HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC---------
Confidence                  689999999986441     223345889999999999999988753 13599999997621111         


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCC--------ccHHHHHHHH
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA--------GSVRSSLALI  218 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~--------~~~~~~~~~~  218 (249)
                                  ..+...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++.......        ......... 
T Consensus       161 ------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-  227 (270)
T 3is3_A          161 ------------VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQM-  227 (270)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHH-
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHH-
Confidence                        012467999999999999988877   48999999999999986431000        000111111 


Q ss_pred             cCCCcccccccccccccchhhHHHhhhhc
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                             +........+...+|+|.++.|
T Consensus       228 -------~~~~~p~~r~~~p~dvA~~v~~  249 (270)
T 3is3_A          228 -------AAHASPLHRNGWPQDVANVVGF  249 (270)
T ss_dssp             -------HHHHSTTCSCBCHHHHHHHHHH
T ss_pred             -------HHhcCCCCCCCCHHHHHHHHHH
Confidence                   1222344567788999988876

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.93  E-value=1.6e-25  Score=185.20  Aligned_cols=203  Identities=15%  Similarity=0.066  Sum_probs=143.5

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+.+ ....+.++.++.+|++|++++.++++
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~  103 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSH--------PADEKAEHLQKTYGVHSKAYKCNISDPKSVEETIS  103 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSS--------CCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHH
Confidence            3568999999999999999999999999999999987        22222211 11112468899999999999888876


Q ss_pred             C-------CCEEEEccccCCC-C--C-C---ChHHHhhhhHHhH----HHHHHHHHHhcCCcceEEEEcccceeeccCCC
Q 025660           82 G-------CTGVLHVATPVDF-E--D-K---EPEEVITQRAING----TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 ~-------~d~vih~a~~~~~-~--~-~---~~~~~~~~~n~~~----t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      .       +|+|||+||.... .  . +   +.++..+++|+.+    ++.+++.+++.+ .++||++||..++.+..  
T Consensus       104 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--  180 (279)
T 3ctm_A          104 QQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNI--  180 (279)
T ss_dssp             HHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC----
T ss_pred             HHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCC--
Confidence            3       8999999997543 1  1 1   1234788999999    556677777666 68999999987543210  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                        ..+...|+.||...|.+++.++.+.   + ++++++||.+.++.......    .....+. 
T Consensus       181 ------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~----~~~~~~~-  236 (279)
T 3ctm_A          181 ------------------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASK----DMKAKWW-  236 (279)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCH----HHHHHHH-
T ss_pred             ------------------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccCh----HHHHHHH-
Confidence                              0124579999999999999988774   6 99999999999987532111    1111111 


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                             .......+++.+|+|.++.|
T Consensus       237 -------~~~p~~~~~~~~dvA~~~~~  256 (279)
T 3ctm_A          237 -------QLTPLGREGLTQELVGGYLY  256 (279)
T ss_dssp             -------HHSTTCSCBCGGGTHHHHHH
T ss_pred             -------HhCCccCCcCHHHHHHHHHH
Confidence                   11122357788888888765

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.93  E-value=5.8e-25  Score=177.35  Aligned_cols=170  Identities=19%  Similarity=0.176  Sum_probs=131.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCC-CCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLP-GASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~-~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++. ..+.++.++.+|++|++++.++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   72 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSV--------DRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK   72 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHH
Confidence            357899999999999999999999999999999986        4433321 111 123478899999999999998887


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCccc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                             ++|++|||||.....     ..+.++..+++|+.++.++++++.+.   + .+++|++||.....+.+     
T Consensus        73 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~-----  146 (235)
T 3l77_A           73 KVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIP-----  146 (235)
T ss_dssp             -HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCCT-----
T ss_pred             HHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccCC-----
Confidence                   689999999986441     22333588999999999999887652   2 36888888876543221     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-cCCcEEEeecCeEeCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~vrp~~v~g~~~~  204 (249)
                                       ....|+.||.+.+.+.+.+..+ .++++++++||.+.++...
T Consensus       147 -----------------~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~  188 (235)
T 3l77_A          147 -----------------YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGG  188 (235)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTT
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccc
Confidence                             1357999999999999987554 3899999999999887654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.93  E-value=1.7e-24  Score=179.75  Aligned_cols=177  Identities=19%  Similarity=0.207  Sum_probs=131.3

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..++|++|||||+|+||++++++|+++|++|++++|+......- .+..+. ..++...+.++.++.+|++|++++.++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKL-PGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSS-CCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhh-hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            455678999999999999999999999999999999987210000 001111 111122234788999999999998888


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|++|||||....     ...+.++..+++|+.++.++++++.+.    + .++||++||..++.+..  
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--  160 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKW--  160 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGGG--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCCC--
Confidence            76       68999999997643     112233478899999999999988654    3 57999999987543320  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecC-eEeC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPS-MVVG  200 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~-~v~g  200 (249)
                                         .+...|+.||.+.+.+.+.++.+   +|+++++|+|| .+.+
T Consensus       161 -------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t  202 (285)
T 3sc4_A          161 -------------------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT  202 (285)
T ss_dssp             -------------------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC
T ss_pred             -------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc
Confidence                               12357999999999999988877   48999999999 4544

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.93  E-value=1e-25  Score=185.13  Aligned_cols=170  Identities=16%  Similarity=0.057  Sum_probs=132.5

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCC--CCCCCeEEEEcCCCChhhHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLP--GASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~--~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++.  ....++.++.+|++|++++.++
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~   77 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDG--------ERLRAAESALRQRFPGARLFASVCDVLDALQVRAF   77 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHH
Confidence            3568999999999999999999999999999999987        4433321 111  1223588999999999988888


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|++|||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+  
T Consensus        78 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--  154 (265)
T 3lf2_A           78 AEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEP--  154 (265)
T ss_dssp             HHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCCT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCCC--
Confidence            75       58999999997543     11233358899999999999888754    33 57899999987653321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                          ....|+.||.+.+.+.+.++.+.   |+++++|+||.|.+|..
T Consensus       155 --------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  197 (265)
T 3lf2_A          155 --------------------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQW  197 (265)
T ss_dssp             --------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             --------------------CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchh
Confidence                                14579999999999998887764   89999999999998753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.93  E-value=2.1e-24  Score=179.14  Aligned_cols=179  Identities=17%  Similarity=0.133  Sum_probs=135.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcc--------cCCchhhhhh-ccCCCCCCCeEEEEcCCCChh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE--------HRNSKDLSFL-KNLPGASERLRIFHADLSHPD   74 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~   74 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.....        .+..+..+.+ ..+...+.++.++.+|++|++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            4689999999999999999999999999999999731100        0112222222 222233457899999999999


Q ss_pred             hHHHHHc-------CCCEEEEccccCCCC------CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEccccee
Q 025660           75 GFDAAIA-------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAV  137 (249)
Q Consensus        75 ~~~~~~~-------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~  137 (249)
                      ++.++++       ++|++|||||.....      ..+.++..+++|+.++.++++++.+.    +..++||++||..++
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL  169 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc
Confidence            9988876       689999999975431      22334588999999999988877542    224699999998765


Q ss_pred             eccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          138 FYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      .+.+                      ....|+.||.+.+.+.+.++.+   +|+++++|+||.|.++...
T Consensus       170 ~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~  217 (286)
T 3uve_A          170 KAYP----------------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH  217 (286)
T ss_dssp             SCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTS
T ss_pred             cCCC----------------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccc
Confidence            4321                      1457999999999999888776   4899999999999998754

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=2e-25  Score=186.67  Aligned_cols=204  Identities=11%  Similarity=0.081  Sum_probs=145.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCC-----CCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP-----GASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~-----~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++++||||||+|+||++++++|+++|++|++++|+.        +..+.+ .++.     ..+.++.++.+|++|++++.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~   88 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKL--------ERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN   88 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHH
Confidence            457899999999999999999999999999999986        333322 1110     12347899999999999988


Q ss_pred             HHHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccC
Q 025660           78 AAIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~  141 (249)
                      ++++       ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||.. +.+.+
T Consensus        89 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~~  166 (303)
T 1yxm_A           89 NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGFP  166 (303)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCCC
Confidence            8876       48999999996432     11222347899999999999998765    23 47899999976 32211


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHH
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~  218 (249)
                                            +...|+.+|...+.+.+.++.+.   |+++++||||.++|+...............  
T Consensus       167 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--  222 (303)
T 1yxm_A          167 ----------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE--  222 (303)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT--
T ss_pred             ----------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHH--
Confidence                                  13579999999999999888764   899999999999999421111110000000  


Q ss_pred             cCCCcccccccccccccchhhHHHhhhhc
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            .+........+.+.+|+|.+++|
T Consensus       223 ------~~~~~~p~~~~~~~~dvA~~i~~  245 (303)
T 1yxm_A          223 ------GSFQKIPAKRIGVPEEVSSVVCF  245 (303)
T ss_dssp             ------TGGGGSTTSSCBCTHHHHHHHHH
T ss_pred             ------HHHhcCcccCCCCHHHHHHHHHH
Confidence                  01111223457888999988765

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.93  E-value=2.1e-25  Score=181.04  Aligned_cols=200  Identities=16%  Similarity=0.125  Sum_probs=146.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHH-CCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|++ .|+.|++.+|+..                 .....+.++.+|++|++++.++++ 
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~-----------------~~~~~~~~~~~Dv~~~~~v~~~~~~   65 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQS-----------------FSAENLKFIKADLTKQQDITNVLDI   65 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCC-----------------CCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccc-----------------cccccceEEecCcCCHHHHHHHHHH
Confidence            567899999999999999999999 7899999988761                 112356899999999999999887 


Q ss_pred             ----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                          ++|++|||||....     ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+          
T Consensus        66 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  135 (244)
T 4e4y_A           66 IKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP----------  135 (244)
T ss_dssp             TTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT----------
T ss_pred             HHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC----------
Confidence                68999999997543     1223335889999999999999998752 125899999987654321          


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC----Ccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN----VKL  224 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~----~~~  224 (249)
                                  +...|+.||.+.+.+.+.++.+   +|+++++|+||.|.+|.....    ........ +.    ...
T Consensus       136 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~----~~~~~~~~-~~~~~~~~~  198 (244)
T 4e4y_A          136 ------------NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNL----IQKYANNV-GISFDEAQK  198 (244)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHH----HHHHHHHH-TCCHHHHHH
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHH----HHhhhhhc-CCCHHHHHH
Confidence                        1457999999999999988874   489999999999988753221    11100000 00    000


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .+........+...+|+|.++.|
T Consensus       199 ~~~~~~p~~r~~~p~dvA~~v~~  221 (244)
T 4e4y_A          199 QEEKEFPLNRIAQPQEIAELVIF  221 (244)
T ss_dssp             HHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             HHhhcCCCCCCcCHHHHHHHHHH
Confidence            11223344567889999998876

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.93  E-value=1.6e-25  Score=188.68  Aligned_cols=171  Identities=17%  Similarity=0.172  Sum_probs=127.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCC--CCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP--GASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++++||||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++.  ....++.++.+|+++++++.+++
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~   78 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ--------DSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAA   78 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHH
Confidence            457899999999999999999999999999999987        443332 1111  11236889999999999988887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC---------CcceEEEEcccceeec
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG---------TVKRVVYTSSNAAVFY  139 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~---------~~~~~v~~SS~~~~~~  139 (249)
                      +       .+|+||||||....     ...+.++..+++|+.|+.++++++.+..         ..++||++||..++.+
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~  158 (319)
T 3ioy_A           79 DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA  158 (319)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC
Confidence            6       57999999997543     1223345889999999999888775431         1468999999887544


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      .+.                      ...|+.||.+.+.+.+.++.+   .|+++++|+||.|.++...
T Consensus       159 ~~~----------------------~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  204 (319)
T 3ioy_A          159 AGS----------------------PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYA  204 (319)
T ss_dssp             CSS----------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----
T ss_pred             CCC----------------------CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccc
Confidence            322                      357999999666666665544   4899999999999998754

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.93  E-value=1.4e-25  Score=184.07  Aligned_cols=173  Identities=11%  Similarity=0.138  Sum_probs=130.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|..     +..+..+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQA-----KDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCG-----GGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCc-----cCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            457999999999999999999999999999998864     111223222 2223334578899999999999988876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                            ++|++|||||....     ...+.++..+++|+.++.++++.+.+. ...++||++||..++.+.+.       
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~-------  157 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF-------  157 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC-------
Confidence                  68999999997544     122334588999999999999999874 11579999999876544322       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                     ...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++..
T Consensus       158 ---------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  199 (262)
T 3ksu_A          158 ---------------YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF  199 (262)
T ss_dssp             ---------------CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHH
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc
Confidence                           3469999999999999988875   79999999999988753

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=4.7e-25  Score=181.04  Aligned_cols=199  Identities=20%  Similarity=0.129  Sum_probs=146.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+...  .++.++.+|++|++++.++++  
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~   74 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREE--------RLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEA   74 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999987        44444322211  368899999999998888876  


Q ss_pred             -----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCC
Q 025660           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                           ++|+||||||.....     ..+.++..+++|+.++.++++++.+.- ..++||++||..++ +.+         
T Consensus        75 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~---------  144 (263)
T 2a4k_A           75 LEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF---------  144 (263)
T ss_dssp             HHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH---------
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC---------
Confidence                 479999999975431     122334789999999999999887642 14699999998765 211         


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccc
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKIC  227 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (249)
                                   +...|+.||...+.+.+.++.+   +|+++++|+||.+.++..... .   ..........      
T Consensus       145 -------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~------  201 (263)
T 2a4k_A          145 -------------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-P---PWAWEQEVGA------  201 (263)
T ss_dssp             -------------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-C---HHHHHHHHHT------
T ss_pred             -------------CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-C---HHHHHHHHhc------
Confidence                         1347999999888888887765   389999999999999875432 1   1111111111      


Q ss_pred             ccccccccchhhHHHhhhhc
Q 025660          228 CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       228 ~~~~~~~~i~v~d~a~a~~~  247 (249)
                        .....+.+.+|+|.+++|
T Consensus       202 --~p~~~~~~p~dvA~~v~~  219 (263)
T 2a4k_A          202 --SPLGRAGRPEEVAQAALF  219 (263)
T ss_dssp             --STTCSCBCHHHHHHHHHH
T ss_pred             --CCCCCCcCHHHHHHHHHH
Confidence              122346788888888765

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.93  E-value=6.4e-25  Score=181.32  Aligned_cols=174  Identities=12%  Similarity=0.041  Sum_probs=132.8

Q ss_pred             CC-CCCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHH
Q 025660            1 ME-EGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         1 m~-~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      |. .++|++|||||+  |+||++++++|+++|++|++++|+..     ..+..+.+....   ..+.++.+|++|++++.
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~   72 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-----LEKRVRPIAQEL---NSPYVYELDVSKEEHFK   72 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-----THHHHHHHHHHT---TCCCEEECCTTCHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhc---CCcEEEEcCCCCHHHHH
Confidence            44 346799999999  99999999999999999999999871     111233332211   13678999999999988


Q ss_pred             HHHc-------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeecc
Q 025660           78 AAIA-------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~  140 (249)
                      ++++       ++|+||||||....         ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.
T Consensus        73 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  152 (275)
T 2pd4_A           73 SLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM  152 (275)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC
Confidence            8876       57999999997531         1122335889999999999999998751 03699999997654322


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                      +                      +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++...
T Consensus       153 ~----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  197 (275)
T 2pd4_A          153 A----------------------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS  197 (275)
T ss_dssp             T----------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred             C----------------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhh
Confidence            1                      13579999999999998887764   899999999999998753

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.93  E-value=1.5e-25  Score=182.66  Aligned_cols=194  Identities=18%  Similarity=0.131  Sum_probs=140.7

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh----ccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL----KNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      .+++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+    ........++.++.+|++|++++.+
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   76 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSK--------QNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADT   76 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCH--------HHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHhccccCcceEEeccCCCHHHHHH
Confidence            3568999999999999999999999999999999987        443332    2111122468899999999998888


Q ss_pred             HHc-------CCCEEEEccccCCCC----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCC
Q 025660           79 AIA-------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      +++       ++|++|||||.....    ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+..  
T Consensus        77 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--  153 (250)
T 3nyw_A           77 EIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFA--  153 (250)
T ss_dssp             HHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------C--
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCC--
Confidence            876       589999999985431    112234789999999998888774    345 57999999987654321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++.....            . 
T Consensus       154 --------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------------~-  200 (250)
T 3nyw_A          154 --------------------DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKA------------G-  200 (250)
T ss_dssp             --------------------CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHT------------T-
T ss_pred             --------------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhc------------C-
Confidence                                23579999999999998887764   89999999999987642110            0 


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                       .      ......++..+|++.++.|
T Consensus       201 -~------~~~~~~~~~p~dva~~v~~  220 (250)
T 3nyw_A          201 -T------PFKDEEMIQPDDLLNTIRC  220 (250)
T ss_dssp             -C------CSCGGGSBCHHHHHHHHHH
T ss_pred             -C------CcccccCCCHHHHHHHHHH
Confidence             0      0122347788888888766

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.93  E-value=9.8e-25  Score=182.08  Aligned_cols=171  Identities=12%  Similarity=-0.042  Sum_probs=133.0

Q ss_pred             CCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|  +||++++++|+++|++|++++|+.        +..+.+.+.......+.++.+|++|+++++++++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE--------TFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH
Confidence            467999999997  999999999999999999999986        3222222221111246789999999999888876


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             ++|++|||||....         ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+   
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~---  177 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP---  177 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT---
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC---
Confidence                   57999999997531         1223335899999999999999998752 146999999987643321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                         ....|+.||.+.+.+.+.++.+.   |+++++|+||.|.++...
T Consensus       178 -------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  221 (296)
T 3k31_A          178 -------------------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASS  221 (296)
T ss_dssp             -------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCC
T ss_pred             -------------------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhh
Confidence                               14579999999999988887764   899999999999998754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.93  E-value=4.7e-25  Score=182.31  Aligned_cols=204  Identities=14%  Similarity=0.093  Sum_probs=146.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCC-CCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.... .++. ..+.++.++.+|++|+++++++++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   97 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSL--------PRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD   97 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCH--------HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            457999999999999999999999999999999986        333222 1111 113468899999999999888876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+...   
T Consensus        98 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~---  173 (277)
T 4fc7_A           98 QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQAL---  173 (277)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCTT---
T ss_pred             HHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCC---
Confidence                   68999999996543     12233458899999999999988753    33 479999999876543321   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                         ...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++................     
T Consensus       174 -------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~-----  229 (277)
T 4fc7_A          174 -------------------QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTK-----  229 (277)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHH-----
T ss_pred             -------------------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHH-----
Confidence                               4579999999999998887764   8999999999999874211000001111111     


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                          ........+...+|+|.++.|
T Consensus       230 ----~~~~p~~r~~~p~dvA~~v~f  250 (277)
T 4fc7_A          230 ----VTASPLQRLGNKTEIAHSVLY  250 (277)
T ss_dssp             ----HHTSTTSSCBCHHHHHHHHHH
T ss_pred             ----hccCCCCCCcCHHHHHHHHHH
Confidence                122234456788888888766

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.93  E-value=8.5e-25  Score=177.85  Aligned_cols=191  Identities=17%  Similarity=0.113  Sum_probs=138.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.          +..+.+|++|++++.++++  
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~----------~~~~~~D~~~~~~~~~~~~~~   75 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------GAPKG----------LFGVEVDVTDSDAVDRAFTAV   75 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSS--------CCCTT----------SEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh--------HHHHH----------hcCeeccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987        22111          1238899999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+      
T Consensus        76 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  148 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIG------  148 (247)
T ss_dssp             HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCC------
Confidence                 57999999997543     11233458899999999998887754    34 68999999987654321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                      +...|+.||...+.+.+.++.+   +|+++++|+||.+.++..... .   .......      
T Consensus       149 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~------  202 (247)
T 1uzm_A          149 ----------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-D---ERIQQGA------  202 (247)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS-C---HHHHHHH------
T ss_pred             ----------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc-C---HHHHHHH------
Confidence                            1357999999999988888776   489999999999988753211 1   1111111      


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ........+.+.+|+|.++.|
T Consensus       203 --~~~~p~~~~~~~~dvA~~~~~  223 (247)
T 1uzm_A          203 --LQFIPAKRVGTPAEVAGVVSF  223 (247)
T ss_dssp             --GGGCTTCSCBCHHHHHHHHHH
T ss_pred             --HhcCCCCCCcCHHHHHHHHHH
Confidence              111223457889999988765

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.93  E-value=1.5e-24  Score=177.07  Aligned_cols=190  Identities=20%  Similarity=0.156  Sum_probs=138.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.          ..+.++.+|++|+++++++++  
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~----------~~~~~~~~Dl~d~~~v~~~~~~~   81 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSG--------EPP----------EGFLAVKCDITDTEQVEQAYKEI   81 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS--------CCC----------TTSEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh--------Hhh----------ccceEEEecCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999986        111          126789999999999888876  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                           .+|+||||||....      ..+++ +..+++|+.++.++++++.+    .+ .++||++||..++.+.+     
T Consensus        82 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----  154 (253)
T 2nm0_A           82 EETHGPVEVLIANAGVTKDQLLMRMSEEDF-TSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSA-----  154 (253)
T ss_dssp             HHHTCSCSEEEEECSCCTTTC---CCTTTT-HHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHH-----
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCC-----
Confidence                 37999999997543      23344 48999999999998887654    35 68999999987643221     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+.   ++++++|+||.+.++.........    .....    
T Consensus       155 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~----~~~~~----  209 (253)
T 2nm0_A          155 -----------------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQ----RANIV----  209 (253)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------C----HHHHH----
T ss_pred             -----------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHH----HHHHH----
Confidence                             13469999999999999887763   799999999999887643211111    01111    


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                          .......++..+|+|.++.|
T Consensus       210 ----~~~p~~~~~~p~dvA~~i~~  229 (253)
T 2nm0_A          210 ----SQVPLGRYARPEEIAATVRF  229 (253)
T ss_dssp             ----TTCTTCSCBCHHHHHHHHHH
T ss_pred             ----hcCCCCCCcCHHHHHHHHHH
Confidence                11122357888999888765

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.93  E-value=2.5e-24  Score=176.71  Aligned_cols=174  Identities=19%  Similarity=0.171  Sum_probs=134.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC---CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG---YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +++++|||||+|+||++++++|+++|   ++|++++|+.        +..+.+.++.....++.++.+|+++++++.+++
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~--------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR--------EQAKELEDLAKNHSNIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT--------TSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecCh--------hhhHHHHHhhccCCceEEEEecCCChHHHHHHH
Confidence            46799999999999999999999999   9999999987        222222222111346899999999999998888


Q ss_pred             c---------CCCEEEEccccCC-C-----CCCChHHHhhhhHHhHHHHHHHHHHhc----------CC----cceEEEE
Q 025660           81 A---------GCTGVLHVATPVD-F-----EDKEPEEVITQRAINGTLGILKSCLKS----------GT----VKRVVYT  131 (249)
Q Consensus        81 ~---------~~d~vih~a~~~~-~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----------~~----~~~~v~~  131 (249)
                      +         ++|+||||||... .     ...+..+..+++|+.++.++++++.+.          +.    .++||++
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            7         7999999999765 2     112333478999999999999888643          10    3689999


Q ss_pred             cccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          132 SSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       132 SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      ||..++.....                   ..+...|+.||.+.+.+.+.++.+   +++++++||||.|.++...
T Consensus       172 sS~~~~~~~~~-------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  228 (267)
T 1sny_A          172 SSILGSIQGNT-------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG  228 (267)
T ss_dssp             CCGGGCSTTCC-------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred             ecccccccCCC-------------------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC
Confidence            99876543210                   012457999999999999988776   5899999999999988754

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.93  E-value=1.2e-24  Score=177.10  Aligned_cols=165  Identities=19%  Similarity=0.241  Sum_probs=127.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc----
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   81 (249)
                      |++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..  ..++.++.+|++|++++.++++    
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   70 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ--------ERLQELKDEL--GDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--cCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999986        4444332211  1368899999999999999986    


Q ss_pred             ---CCCEEEEccccCC-C-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ---GCTGVLHVATPVD-F-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ---~~d~vih~a~~~~-~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                         ++|+||||||... .     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+       
T Consensus        71 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-------  142 (248)
T 3asu_A           71 EWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYA-------  142 (248)
T ss_dssp             TTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT-------
T ss_pred             hCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCC-------
Confidence               5799999999752 1     1122345889999999888888775    344 58999999987643221       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEe-CCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVV-GPFI  203 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~-g~~~  203 (249)
                                     +...|+.||...+.+.+.++.+.   |+++++|+||.|. ++..
T Consensus       143 ---------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~  186 (248)
T 3asu_A          143 ---------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFS  186 (248)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcch
Confidence                           24579999999999999888763   8999999999999 5653

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.93  E-value=3.6e-24  Score=172.29  Aligned_cols=166  Identities=14%  Similarity=0.114  Sum_probs=129.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|.++|++|++++|+.        +..+..     ...++..+.+|++|+++++++++  
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~--------~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDA--------DGVHAP-----RHPRIRREELDITDSQRLQRLFEAL   76 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--------TSTTSC-----CCTTEEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHhhh-----hcCCeEEEEecCCCHHHHHHHHHhc
Confidence            468999999999999999999999999999999987        332221     23478899999999999999987  


Q ss_pred             -CCCEEEEccccCCC---CCCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCccccCCCCCCc
Q 025660           82 -GCTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (249)
Q Consensus        82 -~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (249)
                       ++|++|||||....   ...+.++..+++|+.++..+.+++.+.   + -++||++||..+..+.+.            
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~------------  143 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSAD------------  143 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSS------------
T ss_pred             CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCC------------
Confidence             58999999998654   122334589999999988877766432   2 379999999876543322            


Q ss_pred             hhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                ...|+.||.....+.+.++.+   +|++++.|.||.|.+|....
T Consensus       144 ----------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~  187 (242)
T 4b79_A          144 ----------RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAG  187 (242)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC----
T ss_pred             ----------CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhc
Confidence                      357999999888888777666   48999999999999997543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.93  E-value=3.2e-25  Score=181.07  Aligned_cols=201  Identities=18%  Similarity=0.153  Sum_probs=144.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +|++|||||+|+||++++++|+++|  +.|++++|+.        +..+.+.+..  +.++.++.+|++|+++++++++ 
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   71 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSE--------APLKKLKEKY--GDRFFYVVGDITEDSVLKQLVNA   71 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCH--------HHHHHHHHHH--GGGEEEEESCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCH--------HHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHH
Confidence            5789999999999999999999985  7888888886        4444443221  2468899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|++|||||....      ...+.++..+++|+.++.++++++.    +.+  ++||++||..++.+.+    
T Consensus        72 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~----  145 (254)
T 3kzv_A           72 AVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFS----  145 (254)
T ss_dssp             HHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSC----
T ss_pred             HHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCC----
Confidence                  68999999997432      1123335889999999999988874    333  7999999987654321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-CCcEEEeecCeEeCCCCCCCCCcc-----HHHHHHHHc
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPKFAGS-----VRSSLALIL  219 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~vrp~~v~g~~~~~~~~~~-----~~~~~~~~~  219 (249)
                                        +...|+.||.+.+.+.+.++.+. ++++++|+||.+.++.........     .....+.  
T Consensus       146 ------------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--  205 (254)
T 3kzv_A          146 ------------------SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKM--  205 (254)
T ss_dssp             ------------------CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHH--
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHH--
Confidence                              24579999999999999998875 899999999999999765431110     0111111  


Q ss_pred             CCCcccccccccccccchhhHHHhhhhc
Q 025660          220 GNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            +........+...+|+|.+++|
T Consensus       206 ------~~~~~~~~r~~~p~dva~~v~~  227 (254)
T 3kzv_A          206 ------FRGLKENNQLLDSSVPATVYAK  227 (254)
T ss_dssp             ------HHHHHTTC----CHHHHHHHHH
T ss_pred             ------HHHHHhcCCcCCcccHHHHHHH
Confidence                  1122234456777888877765

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.93  E-value=5.1e-25  Score=176.44  Aligned_cols=189  Identities=14%  Similarity=0.017  Sum_probs=142.8

Q ss_pred             CCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ..++|++|||||+|+||++++++|+++|++|++++|+.        +                   +|++|+++++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~-------------------~D~~~~~~v~~~~~   55 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT--------G-------------------LDISDEKSVYHYFE   55 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG--------T-------------------CCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc--------c-------------------cCCCCHHHHHHHHH
Confidence            34568899999999999999999999999999999987        1                   89999999998886


Q ss_pred             ---CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 ---GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 ---~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                         ++|++|||||....      ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+          
T Consensus        56 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  125 (223)
T 3uce_A           56 TIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA----------  125 (223)
T ss_dssp             HHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT----------
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC----------
Confidence               68999999997622      1123334789999999999999998752 135899999987643321          


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcC-CcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG-LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVM  230 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (249)
                                  +...|+.||.+.+.+.+.++.+.+ +++++++||.+.+|............+...        +....
T Consensus       126 ------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~--------~~~~~  185 (223)
T 3uce_A          126 ------------NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQR--------TQSHL  185 (223)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHH--------HHHHS
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHH--------HhhcC
Confidence                        245799999999999999988764 999999999999987543322111111111        12223


Q ss_pred             cccccchhhHHHhhhhc
Q 025660          231 NRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~~  247 (249)
                      ....+...+|+|.++.|
T Consensus       186 ~~~~~~~~~dvA~~~~~  202 (223)
T 3uce_A          186 PVGKVGEASDIAMAYLF  202 (223)
T ss_dssp             TTCSCBCHHHHHHHHHH
T ss_pred             CCCCccCHHHHHHHHHH
Confidence            34567788999988765

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.93  E-value=1.2e-24  Score=181.38  Aligned_cols=204  Identities=10%  Similarity=-0.037  Sum_probs=144.0

Q ss_pred             CCCeEEEeccchh--hHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGF--IASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+  ||++++++|+++|++|++++|+.        +..+.+.++.....++.++.+|++|+++++++++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  101 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD--------ALKKRVEPLAEELGAFVAGHCDVADAASIDAVFE  101 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH--------HHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHH
Confidence            4578999999977  99999999999999999999985        3222222222112357899999999999888876


Q ss_pred             -------CCCEEEEccccCC----C-----CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVD----F-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~----~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             ++|++|||||...    .     ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+   
T Consensus       102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~---  178 (293)
T 3grk_A          102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP---  178 (293)
T ss_dssp             HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT---
T ss_pred             HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC---
Confidence                   6899999999764    1     1223335889999999999999987642 146999999987654321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (249)
                                         ....|+.||.+.+.+.+.++.+   +|+++++|+||.|.++..... .... ......   
T Consensus       179 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~-~~~~~~---  234 (293)
T 3grk_A          179 -------------------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI-GDFR-YILKWN---  234 (293)
T ss_dssp             -------------------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------CCHH-HHHHHH---
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc-cchH-HHHHHH---
Confidence                               1457999999999999888776   389999999999999875432 1111 111111   


Q ss_pred             CcccccccccccccchhhHHHhhhhc
Q 025660          222 VKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       222 ~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                           ........+...+|+|.++.|
T Consensus       235 -----~~~~p~~r~~~pedvA~~v~~  255 (293)
T 3grk_A          235 -----EYNAPLRRTVTIDEVGDVGLY  255 (293)
T ss_dssp             -----HHHSTTSSCCCHHHHHHHHHH
T ss_pred             -----HhcCCCCCCCCHHHHHHHHHH
Confidence                 111223445667888887765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=4.7e-25  Score=182.39  Aligned_cols=204  Identities=15%  Similarity=0.115  Sum_probs=141.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCC--CCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLP--GASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~--~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++.  ....++.++.+|++|++++.+++
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~  102 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV--------GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF  102 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCh--------HHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHH
Confidence            457899999999999999999999999999999986        3333321 111  11235788999999999988887


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhH----HHHHHHHHHhcCC-cceEEEEcccceeeccCCC
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAING----TLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~----t~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~  143 (249)
                      +       ++|+||||||.....     ..+.++..+++|+.+    ++.+++.+++.+. .++||++||..++...+. 
T Consensus       103 ~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~-  181 (279)
T 1xg5_A          103 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-  181 (279)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-
T ss_pred             HHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC-
Confidence            6       689999999975431     122335789999999    6667777776651 279999999875421100 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHH
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~  218 (249)
                                         .+...|+.||.+.+.+.+.++.+     .++++++|+||.|.++.............    
T Consensus       182 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~----  238 (279)
T 1xg5_A          182 -------------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKA----  238 (279)
T ss_dssp             -------------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHH----
T ss_pred             -------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHH----
Confidence                               12357999999999888877654     47999999999998875211000000000    


Q ss_pred             cCCCcccccccccccccchhhHHHhhhhc
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                              ........+++.+|+|.+++|
T Consensus       239 --------~~~~~~~~~~~~~dvA~~i~~  259 (279)
T 1xg5_A          239 --------AATYEQMKCLKPEDVAEAVIY  259 (279)
T ss_dssp             --------HHHHC---CBCHHHHHHHHHH
T ss_pred             --------hhhcccccCCCHHHHHHHHHH
Confidence                    111122347889999998876

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.92  E-value=1.2e-24  Score=183.25  Aligned_cols=178  Identities=16%  Similarity=0.137  Sum_probs=133.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcc----cCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE----HRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.....    .+..+..+.+ ......+.++.++.+|++|++++.+
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            4578999999999999999999999999999988631110    0111222221 1222234578899999999999888


Q ss_pred             HHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCC
Q 025660           79 AIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      +++       ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+..++||++||..++.+.+ 
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~-  203 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP-  203 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC-
Confidence            876       68999999997643     12233458899999999998887754    22246899999987654331 


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                           +...|+.||.+.+.+.+.++.+.   |+++++|+||.|+++..
T Consensus       204 ---------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  246 (317)
T 3oec_A          204 ---------------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMA  246 (317)
T ss_dssp             ---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred             ---------------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccc
Confidence                                 14579999999999999888774   89999999999999753

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.92  E-value=1.2e-24  Score=180.17  Aligned_cols=172  Identities=19%  Similarity=0.180  Sum_probs=134.0

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+....  +.++.++.+|+++++++.+++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~   70 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSA--------ERLRELEVAH--GGNAVGVVGDVRSLQDQKRAA   70 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHT--BTTEEEEECCTTCHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH--------HHHHHHHHHc--CCcEEEEEcCCCCHHHHHHHH
Confidence            667789999999999999999999999999999999987        5554443221  347889999999999888877


Q ss_pred             c-------CCCEEEEccccCCCC-------CC---ChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeeccC
Q 025660           81 A-------GCTGVLHVATPVDFE-------DK---EPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-------~~---~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~  141 (249)
                      +       ++|++|||||.....       .+   +.++..+++|+.++.++++++.+.-  ..+++|++||..++.+..
T Consensus        71 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  150 (281)
T 3zv4_A           71 ERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG  150 (281)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS
T ss_pred             HHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC
Confidence            6       579999999975431       11   1234788999999999988876431  136999999987654321


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~  204 (249)
                                            +...|+.||.+.+.+.+.++.+.  .++++.|.||.|.++...
T Consensus       151 ----------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~  193 (281)
T 3zv4_A          151 ----------------------GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRG  193 (281)
T ss_dssp             ----------------------SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CC
T ss_pred             ----------------------CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccc
Confidence                                  13579999999999999888774  499999999999998754

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.92  E-value=2.6e-24  Score=179.77  Aligned_cols=179  Identities=17%  Similarity=0.115  Sum_probs=134.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCc----ccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDP----EHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+....    ..+..+..+. ..++...+.++.++.+|++|++++.+
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            457999999999999999999999999999999973110    0011122222 12222234578999999999999888


Q ss_pred             HHc-------CCCEEEEccccCCCC------CCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccC
Q 025660           79 AIA-------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~  141 (249)
                      +++       ++|+||||||.....      ..+.++..+++|+.++.++++++.+.    +..++||++||..++.+.+
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~  186 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAE  186 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC
Confidence            876       689999999975431      12333589999999999998887542    2257999999987653321


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                            +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++...
T Consensus       187 ----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  230 (299)
T 3t7c_A          187 ----------------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLL  230 (299)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred             ----------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccc
Confidence                                  14579999999999998887764   899999999999998754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.92  E-value=1.6e-24  Score=178.28  Aligned_cols=169  Identities=17%  Similarity=0.121  Sum_probs=130.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cC-CCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NL-PGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~-~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++ ...+.++.++.+|++|++++.++++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL--------EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            457899999999999999999999999999999986        3333221 11 1112467889999999999888876


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccc-eeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNA-AVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~-~~~~~~~~~  144 (249)
                             ++|+||||||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||.. +..+.+   
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~---  167 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMP---  167 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSS---
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCCC---
Confidence                   689999999975431     122334789999999999888764    334 67999999976 322110   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                         +...|+.||...+.+.+.++.+   +|+++++|+||.+.++..
T Consensus       168 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  210 (267)
T 1vl8_A          168 -------------------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT  210 (267)
T ss_dssp             -------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT
T ss_pred             -------------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccc
Confidence                               2457999999999999988776   489999999999998763

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.92  E-value=1.7e-24  Score=178.49  Aligned_cols=166  Identities=21%  Similarity=0.255  Sum_probs=127.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHcC--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG--   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   82 (249)
                      |++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++... .++.++.+|++|++++.++++.  
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~--------~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~   92 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRRE--------ERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLP   92 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            7899999999999999999999999999999986        4444332 22211 4688999999999999999874  


Q ss_pred             -----CCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcc-eEEEEcccceeeccCCCccc
Q 025660           83 -----CTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVK-RVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        83 -----~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~-~~v~~SS~~~~~~~~~~~~~  146 (249)
                           +|+||||||....      ...+.++..+++|+.++.++++.+.    +.+ .+ +||++||..++.+.+     
T Consensus        93 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~-----  166 (272)
T 2nwq_A           93 EEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYP-----  166 (272)
T ss_dssp             GGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCT-----
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCC-----
Confidence                 5999999997532      1123335789999999777666654    445 56 999999987643221     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       +...|+.||.+.+.+.+.++.+   +|+++++|+||.+.++..
T Consensus       167 -----------------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~  209 (272)
T 2nwq_A          167 -----------------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFS  209 (272)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcch
Confidence                             1357999999999999988765   379999999999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.92  E-value=2.3e-24  Score=175.54  Aligned_cols=191  Identities=14%  Similarity=0.037  Sum_probs=136.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+       ....++ +|+  .++++++++  
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~-------~~~~~~-~D~--~~~~~~~~~~~   79 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--------ELLKRS-------GHRYVV-CDL--RKDLDLLFEKV   79 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHT-------CSEEEE-CCT--TTCHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHhh-------CCeEEE-eeH--HHHHHHHHHHh
Confidence            468999999999999999999999999999999976        333322       145667 999  444555544  


Q ss_pred             -CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHH----HHHhcCCcceEEEEcccceeeccCCCccccCCCC
Q 025660           82 -GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        82 -~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                       ++|+||||||....     ...+.++..+++|+.++.++.+    .+++.+ .++||++||..++.+.+          
T Consensus        80 ~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  148 (249)
T 1o5i_A           80 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE----------  148 (249)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred             cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCC----------
Confidence             79999999997543     1122335889999998776654    455555 68999999987653321          


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHH-HHcCCCccccc
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNVKLKIC  227 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~  227 (249)
                                  +...|+.||.+.+.+.+.++.+   +|+++++|+||.++++.......    .... ....       
T Consensus       149 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~-------  205 (249)
T 1o5i_A          149 ------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS----EEKKKQVES-------  205 (249)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC----HHHHHHHHT-------
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch----hhHHHHHHh-------
Confidence                        2457999999999998888776   48999999999999986421111    1111 1111       


Q ss_pred             ccccccccchhhHHHhhhhc
Q 025660          228 CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       228 ~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ......+.+.+|+|.+++|
T Consensus       206 -~~p~~~~~~~~dvA~~i~~  224 (249)
T 1o5i_A          206 -QIPMRRMAKPEEIASVVAF  224 (249)
T ss_dssp             -TSTTSSCBCHHHHHHHHHH
T ss_pred             -cCCCCCCcCHHHHHHHHHH
Confidence             1223467889999998865

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.92  E-value=1.3e-24  Score=178.69  Aligned_cols=204  Identities=13%  Similarity=0.036  Sum_probs=143.2

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+||||||+  |+||++++++|+++|++|++++|+.        ...+.++++.....++.++.+|++|++++.++++
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD--------RFKDRITEFAAEFGSELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch--------hhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHH
Confidence            56899999999  9999999999999999999999985        2222222221112347889999999999988876


Q ss_pred             -------CCCEEEEccccCCC----------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCC
Q 025660           82 -------GCTGVLHVATPVDF----------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 -------~~d~vih~a~~~~~----------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~  143 (249)
                             ++|+||||||....          ...+.++..+++|+.++.++++.+.+.- ..++||++||..++.+.+  
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--  162 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP--  162 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--
T ss_pred             HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC--
Confidence                   57999999997542          1122335889999999999999997652 136899999987653321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++..... .. ........  
T Consensus       163 --------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~-~~~~~~~~--  218 (271)
T 3ek2_A          163 --------------------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-KS-FGKILDFV--  218 (271)
T ss_dssp             --------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-HH-HHHHHHHH--
T ss_pred             --------------------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-cc-hHHHHHHH--
Confidence                                24579999999999998887764   89999999999999875432 11 01111111  


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ........+...+|+|.+++|
T Consensus       219 ------~~~~~~~~~~~pedva~~i~~  239 (271)
T 3ek2_A          219 ------ESNSPLKRNVTIEQVGNAGAF  239 (271)
T ss_dssp             ------HHHSTTSSCCCHHHHHHHHHH
T ss_pred             ------HhcCCcCCCCCHHHHHHHHHH
Confidence                  112233456677888887765

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.92  E-value=5.3e-25  Score=178.98  Aligned_cols=170  Identities=12%  Similarity=0.033  Sum_probs=133.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        ++.+. .+++...+.++..+.+|++|+++++++++ 
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~--------~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~   79 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRA--------TLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK   79 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH--------HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999987        44333 23333344578899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|++|||||....     ...+.++..+++|+.++..+.+++.    +.+..++||++||..+..+.+.    
T Consensus        80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~----  155 (255)
T 4g81_D           80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT----  155 (255)
T ss_dssp             HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT----
T ss_pred             HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC----
Confidence                  47999999997654     1233445999999999888777653    3332579999999876543322    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                        ...|+.||.....+.+.++.+   +|++++.|.||.|.+|..
T Consensus       156 ------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  197 (255)
T 4g81_D          156 ------------------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN  197 (255)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchh
Confidence                              357999999888888777666   489999999999998864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.92  E-value=1.7e-24  Score=179.52  Aligned_cols=169  Identities=14%  Similarity=0.059  Sum_probs=132.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchh-hhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-LSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +. .+.+ +++...+.++.++.+|++|.+++.++++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   99 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANS--------TESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE   99 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC--------HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--------hHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHH
Confidence            467999999999999999999999999999999986        22 2211 1122223468899999999998887765


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                             ++|+||||||.....     ..+.++..+++|+.++.++++++.+.  + .++||++||..++.+...     
T Consensus       100 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~-----  173 (283)
T 1g0o_A          100 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKAVP-----  173 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSSCS-----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCCCC-----
Confidence                   589999999976431     12334588999999999999999876  4 579999999775432110     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                      +...|+.||...+.+.+.++.+   +|+++++|+||.|.++.
T Consensus       174 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  215 (283)
T 1g0o_A          174 ----------------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM  215 (283)
T ss_dssp             ----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             ----------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchh
Confidence                            1457999999999999888765   48999999999999875

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.4e-24  Score=178.78  Aligned_cols=165  Identities=16%  Similarity=0.157  Sum_probs=130.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+.+..   .++.++.+|++|+++++++++  
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~   76 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE--------SGGRALEQEL---PGAVFILCDVTQEDDVKTLVSET   76 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHC---TTEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh---cCCeEEEcCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999987        4444332211   147889999999999888876  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|+||||||....      ...+.++..+++|+.++.++++++.+.   + .++||++||..+..+.+.     
T Consensus        77 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~-----  150 (270)
T 1yde_A           77 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQ-----  150 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTT-----
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCC-----
Confidence                 68999999997542      111223588999999999999888642   2 479999999865433211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                       ...|+.||...+.+.+.++.+   +|+++++|+||.+++|.
T Consensus       151 -----------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~  191 (270)
T 1yde_A          151 -----------------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL  191 (270)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             -----------------CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence                             357999999999999988765   58999999999999985

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.92  E-value=3.2e-24  Score=176.19  Aligned_cols=207  Identities=11%  Similarity=0.004  Sum_probs=147.7

Q ss_pred             CCCCeEEEeccchh--hHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGTGF--IASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .+++++|||||+|+  ||++++++|+++|++|++++|+.     +..+....+..... ..++.++.+|++|++++++++
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE-----RLEKSVHELAGTLD-RNDSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHTSS-SCCCEEEECCCSSSHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch-----HHHHHHHHHHHhcC-CCCceEEeCCCCCHHHHHHHH
Confidence            35689999999977  99999999999999999999876     11222222222211 236899999999999888887


Q ss_pred             c-------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCC
Q 025660           81 A-------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~  143 (249)
                      +       .+|++||+||....         ...+.++..+++|+.++.++++.+.+.- ..++||++||..++.+.+  
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--  156 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP--  156 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT--
T ss_pred             HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC--
Confidence            6       58999999997641         1122334789999999999999998753 136999999987653321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          ....|+.||.+.+.+.+.++.+.   |+++++|+||.|.++..... ..........   
T Consensus       157 --------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~---  212 (266)
T 3oig_A          157 --------------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI-SDFNSILKDI---  212 (266)
T ss_dssp             --------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-TTHHHHHHHH---
T ss_pred             --------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-cchHHHHHHH---
Confidence                                14579999999999998887764   79999999999999865432 1111111111   


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ........+...+|+|.++.|
T Consensus       213 ------~~~~~~~~~~~p~dva~~v~~  233 (266)
T 3oig_A          213 ------EERAPLRRTTTPEEVGDTAAF  233 (266)
T ss_dssp             ------HHHSTTSSCCCHHHHHHHHHH
T ss_pred             ------HhcCCCCCCCCHHHHHHHHHH
Confidence                  111222346677888887765

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=2.2e-24  Score=178.56  Aligned_cols=211  Identities=17%  Similarity=0.080  Sum_probs=147.0

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCC---CeEEEEcCCCChhhHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASE---RLRIFHADLSHPDGFDA   78 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~---~~~~~~~Dl~~~~~~~~   78 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.   ++.++.+|++|++++.+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   75 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSS--------ERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQ   75 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHH
Confidence            3568999999999999999999999999999999986        433332 22211122   68899999999998888


Q ss_pred             HHc-------CCCEEEEccccCCCC---------CCChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeecc
Q 025660           79 AIA-------GCTGVLHVATPVDFE---------DKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~---------~~~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~  140 (249)
                      +++       ++|+||||||.....         ..+.++..+++|+.++.++++++.+.-  ..++||++||..++.+.
T Consensus        76 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  155 (280)
T 1xkq_A           76 IINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA  155 (280)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC
Confidence            876       689999999975321         112235889999999999998886531  01799999998754322


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCC-CccHH-HHH
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF-AGSVR-SSL  215 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~-~~~~~-~~~  215 (249)
                      .                     .+...|+.||.+.+.+.+.++.+   +|+++++|+||.+++|...... ..... ...
T Consensus       156 ~---------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  214 (280)
T 1xkq_A          156 Q---------------------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFY  214 (280)
T ss_dssp             C---------------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHH
T ss_pred             C---------------------CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchH
Confidence            0                     12457999999999999888765   4899999999999998643210 00000 000


Q ss_pred             HHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          216 ALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      .....     +........+.+.+|+|.++.|
T Consensus       215 ~~~~~-----~~~~~p~~~~~~pedvA~~v~~  241 (280)
T 1xkq_A          215 NFMAS-----HKECIPIGAAGKPEHIANIILF  241 (280)
T ss_dssp             HHHHH-----CTTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHH-----HHcCCCCCCCCCHHHHHHHHHH
Confidence            00000     0111223467889999988776

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.92  E-value=3.6e-25  Score=185.56  Aligned_cols=206  Identities=16%  Similarity=0.126  Sum_probs=141.3

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+ ++++||||||||+||++++++|+++|++|++++|+...   ...++.+.+..+.  ..+++++.+|++|++++.+++
T Consensus         1 M~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~   74 (313)
T 1qyd_A            1 MD-KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV---SNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDAL   74 (313)
T ss_dssp             -C-CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCS---SCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHH
T ss_pred             CC-CCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcc---cchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHH
Confidence            53 35789999999999999999999999999999998610   0012222222211  135789999999999999999


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      +++|+|||+++....          ..|+.++++++++|++.+.+++||+ |+   ++.....  +   +.+..      
T Consensus        75 ~~~d~vi~~a~~~~~----------~~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~~--~---~~~~~------  129 (313)
T 1qyd_A           75 KQVDVVISALAGGVL----------SHHILEQLKLVEAIKEAGNIKRFLP-SE---FGMDPDI--M---EHALQ------  129 (313)
T ss_dssp             TTCSEEEECCCCSSS----------STTTTTHHHHHHHHHHSCCCSEEEC-SC---CSSCTTS--C---CCCCS------
T ss_pred             hCCCEEEECCccccc----------hhhHHHHHHHHHHHHhcCCCceEEe-cC---CcCCccc--c---ccCCC------
Confidence            999999999997543          1367889999999998765789985 43   3222111  0   11100      


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhH
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                        +..+.| .+|..+|.+++.    .+++++++||+.++|+......... .  .....++....++.++..++|++++|
T Consensus       130 --p~~~~y-~sK~~~e~~~~~----~g~~~~ilrp~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~i~~~D  199 (313)
T 1qyd_A          130 --PGSITF-IDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGSLAQLD-G--HMMPPRDKVLIYGDGNVKGIWVDEDD  199 (313)
T ss_dssp             --STTHHH-HHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTTSSCTT-C--CSSCCSSEECCBTTSCSEEEEECHHH
T ss_pred             --CCcchH-HHHHHHHHHHHh----cCCCeEEEEeceecccccccccccc-c--cccCCCCeEEEeCCCCceEEEEEHHH
Confidence              113568 999999988754    6899999999999886432211100 0  00012222334567788899999999


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      ++++++.
T Consensus       200 va~~~~~  206 (313)
T 1qyd_A          200 VGTYTIK  206 (313)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.92  E-value=1.1e-24  Score=180.40  Aligned_cols=201  Identities=18%  Similarity=0.120  Sum_probs=140.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+. ++.. ....+.++.+|++|++++.++++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  103 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRP--------DVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA  103 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHH
Confidence            457899999999999999999999999999999987        4433321 1111 11235889999999999888876


Q ss_pred             -------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHh----cC-CcceEEEEcccceeeccCCC
Q 025660           82 -------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SG-TVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~----~~-~~~~~v~~SS~~~~~~~~~~  143 (249)
                             .+|+||||||....      ...+.++..+++|+.++.++++++.+    .+ ..++||++||..++.+.+  
T Consensus       104 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~--  181 (281)
T 4dry_A          104 AVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP--  181 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC--
Confidence                   57999999997532      12233457999999998887776654    22 146999999987643321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          +...|+.||.+.+.+.+.++.+   +++++++|+||.|.++........           
T Consensus       182 --------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------  230 (281)
T 4dry_A          182 --------------------NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG-----------  230 (281)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE-----------
T ss_pred             --------------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch-----------
Confidence                                2467999999999999888776   489999999999998764321110           


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        ............++..+|+|.+++|
T Consensus       231 --~~~~~~~~~~~~~~~pedvA~~v~f  255 (281)
T 4dry_A          231 --VLQANGEVAAEPTIPIEHIAEAVVY  255 (281)
T ss_dssp             --EECTTSCEEECCCBCHHHHHHHHHH
T ss_pred             --hhhhhhcccccCCCCHHHHHHHHHH
Confidence              0000111122346788999999876

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.92  E-value=1.2e-24  Score=183.72  Aligned_cols=179  Identities=16%  Similarity=0.094  Sum_probs=132.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCc--ccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDP--EHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+....  ..+..+..+. ..++...+.++.++.+|++|++++.+++
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            457899999999999999999999999999999871000  0000122222 2222223457889999999999988887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcC---------CcceEEEEcccceeec
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG---------TVKRVVYTSSNAAVFY  139 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~---------~~~~~v~~SS~~~~~~  139 (249)
                      +       ++|+||||||....     ...+.++..+++|+.++.++++++.+.-         ..++||++||..++.+
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~  185 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG  185 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC
Confidence            6       68999999998653     1223335889999999999988875431         0159999999876543


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                      ...                      ...|+.||.+.+.+.+.++.+   +|+++++|+|| +.++....
T Consensus       186 ~~~----------------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~  231 (322)
T 3qlj_A          186 SVG----------------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET  231 (322)
T ss_dssp             BTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC
T ss_pred             CCC----------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh
Confidence            321                      457999999999999988877   58999999999 77766543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.92  E-value=3.9e-24  Score=174.42  Aligned_cols=205  Identities=15%  Similarity=0.095  Sum_probs=147.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++|++|||||+|+||++++++|+++|++|++++++..       +..+. ..++...+.++.++.+|+++.+++.++++.
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   78 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK-------EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSS   78 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCS-------HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch-------HHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHH
Confidence            5689999999999999999999999999988755431       22222 222222345788999999999888777652


Q ss_pred             -------------CCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCC
Q 025660           83 -------------CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        83 -------------~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~  143 (249)
                                   +|+||||||....     ...+.++..+++|+.++.++++.+.+. ...++||++||..++.+.+  
T Consensus        79 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--  156 (255)
T 3icc_A           79 LDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP--  156 (255)
T ss_dssp             HHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT--
T ss_pred             HHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC--
Confidence                         8999999997543     122333578999999999999999875 1146999999987644321  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (249)
                                          ....|+.||.+.+.+.+.++.+.   ++++++++||.+.++.........  ......  
T Consensus       157 --------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~--  212 (255)
T 3icc_A          157 --------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDP--MMKQYA--  212 (255)
T ss_dssp             --------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSH--HHHHHH--
T ss_pred             --------------------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccH--HHHHhh--
Confidence                                13579999999999998887763   899999999999998765432211  111111  


Q ss_pred             CCcccccccccccccchhhHHHhhhhc
Q 025660          221 NVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       221 ~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                            ........+...+|++.++.|
T Consensus       213 ------~~~~~~~~~~~~~dva~~~~~  233 (255)
T 3icc_A          213 ------TTISAFNRLGEVEDIADTAAF  233 (255)
T ss_dssp             ------HHTSTTSSCBCHHHHHHHHHH
T ss_pred             ------hccCCcCCCCCHHHHHHHHHH
Confidence                  112223456778888887765

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.92  E-value=7.4e-25  Score=178.93  Aligned_cols=211  Identities=14%  Similarity=0.049  Sum_probs=134.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   82 (249)
                      ||++|||||+|+||++++++|+++|++|++++|+.        ++.+.            .+.+|+++++++.++++.  
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~------------~~~~Dl~~~~~v~~~~~~~~   60 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD--------AEVIA------------DLSTAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS--------SSEEC------------CTTSHHHHHHHHHHHHTTCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc--------hhhcc------------ccccCCCCHHHHHHHHHHhC
Confidence            35899999999999999999999999999999987        21110            157899999999999864  


Q ss_pred             --CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCc---cccCCCCCC
Q 025660           83 --CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV---DMMDETFWS  153 (249)
Q Consensus        83 --~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~---~~~~e~~~~  153 (249)
                        +|+||||||.... ... ++..+++|+.++.++++++.+    .+ .++||++||..++.......   ....+..+.
T Consensus        61 ~~id~lv~~Ag~~~~-~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           61 KGMDGLVLCAGLGPQ-TKV-LGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             TCCSEEEECCCCCTT-CSS-HHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             CCCCEEEECCCCCCC-ccc-HHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchh
Confidence              5999999998652 123 458999999999999888863    34 57999999988653211100   000000000


Q ss_pred             chhH-hh--hcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccc
Q 025660          154 DVDY-IR--KLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKIC  227 (249)
Q Consensus       154 ~~~~-~~--~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (249)
                      .... ..  ....+...|+.||.+.+.+.+.++.+   +++++++|+||.+.++.........  ........     + 
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~-----~-  209 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP--RYGESIAK-----F-  209 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------------C-
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch--hHHHHHHh-----c-
Confidence            0000 00  00012457999999999998887765   5899999999999998753210100  00000000     0 


Q ss_pred             ccccccccchhhHHHhhhhc
Q 025660          228 CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       228 ~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ......+.+.+|+|.+++|
T Consensus       210 -~~~~~~~~~~~dvA~~~~~  228 (257)
T 1fjh_A          210 -VPPMGRRAEPSEMASVIAF  228 (257)
T ss_dssp             -CCSTTSCCCTHHHHHHHHH
T ss_pred             -ccccCCCCCHHHHHHHHHH
Confidence             1122357889999998876

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=2e-24  Score=180.24  Aligned_cols=171  Identities=19%  Similarity=0.142  Sum_probs=131.8

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCC---CeEEEEcCCCChhhHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASE---RLRIFHADLSHPDGFDA   78 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~---~~~~~~~Dl~~~~~~~~   78 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.   ++.++.+|++|++++.+
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~   95 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNE--------DRLEETKQQILKAGVPAEKINAVVADVTEASGQDD   95 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHH
Confidence            3567899999999999999999999999999999986        433322 11111122   68899999999999888


Q ss_pred             HHc-------CCCEEEEccccCCCC-------CCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccC
Q 025660           79 AIA-------GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~  141 (249)
                      +++       ++|+||||||.....       ..+.++..+++|+.++.++++++.+.   . .++||++||..++.+..
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~IV~isS~~~~~~~~  174 (297)
T 1xhl_A           96 IINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSIVAGPQAH  174 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGSSSCC
T ss_pred             HHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCEEEEEcCchhccCCC
Confidence            876       689999999975321       12233588999999999998887653   2 27999999987543220


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                           .+...|+.||.+.+.+.+.++.+   +|+++++|+||.|.++..
T Consensus       175 ---------------------~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~  218 (297)
T 1xhl_A          175 ---------------------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM  218 (297)
T ss_dssp             ---------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHH
T ss_pred             ---------------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccc
Confidence                                 02457999999999999888765   589999999999999863

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.92  E-value=1.9e-24  Score=178.51  Aligned_cols=168  Identities=18%  Similarity=0.080  Sum_probs=132.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKP--------GSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIER  103 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESST--------TTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999987        332222 2222234578999999999998888876 


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++|||||....     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.       
T Consensus       104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~-------  175 (275)
T 4imr_A          104 AEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPK-------  175 (275)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-------
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCC-------
Confidence                 68999999997543     1223335889999999999888874    344 5799999998764321       


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                                     .+...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++.
T Consensus       176 ---------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  218 (275)
T 4imr_A          176 ---------------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDR  218 (275)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred             ---------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcc
Confidence                           123569999999999998887764   8999999999998875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.92  E-value=6.7e-24  Score=175.65  Aligned_cols=203  Identities=11%  Similarity=0.014  Sum_probs=147.0

Q ss_pred             CCCeEEEeccchh--hHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGF--IASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+  ||++++++|+++|++|++++|+.      ..+..+.+....   .++.++.+|+++++++.++++
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ------FKDRVEKLCAEF---NPAAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT------CHHHHHHHHGGG---CCSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch------HHHHHHHHHHhc---CCceEEEeecCCHHHHHHHHH
Confidence            4579999999955  99999999999999999999975      123333332221   257899999999999888876


Q ss_pred             -------CCCEEEEccccCCC----------CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCC
Q 025660           82 -------GCTGVLHVATPVDF----------EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        82 -------~~d~vih~a~~~~~----------~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~  142 (249)
                             ++|+||||||....          ...+.++..+++|+.++.++++++.+.  ...++||++||..++.+.+ 
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-  174 (280)
T 3nrc_A           96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP-  174 (280)
T ss_dssp             HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT-
T ss_pred             HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC-
Confidence                   47999999998642          122333478999999999999988753  1157999999987643321 


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHc
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~  219 (249)
                                           +...|+.||.+.+.+.+.++.+   +++++++|+||.|.++..... .... ...... 
T Consensus       175 ---------------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~-~~~~~~-  230 (280)
T 3nrc_A          175 ---------------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGI-SNFK-KMLDYN-  230 (280)
T ss_dssp             ---------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGC-TTHH-HHHHHH-
T ss_pred             ---------------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcC-cchH-HHHHHH-
Confidence                                 2457999999999999888776   489999999999999875432 1111 111111 


Q ss_pred             CCCcccccccccccccchhhHHHhhhhc
Q 025660          220 GNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       220 ~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                             ........+...+|+|.++.|
T Consensus       231 -------~~~~p~~~~~~pedvA~~v~~  251 (280)
T 3nrc_A          231 -------AMVSPLKKNVDIMEVGNTVAF  251 (280)
T ss_dssp             -------HHHSTTCSCCCHHHHHHHHHH
T ss_pred             -------HhcCCCCCCCCHHHHHHHHHH
Confidence                   111223456778888888766

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.92  E-value=5.1e-24  Score=175.83  Aligned_cols=180  Identities=15%  Similarity=0.182  Sum_probs=130.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |..++|++|||||+|+||++++++|+++|++|++++|+...... ..+..+. ..+....+.++.++.+|++|++++.++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPK-LPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTT-SCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhh-hHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            55677899999999999999999999999999999998721000 0001111 111112234788999999999998888


Q ss_pred             Hc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCC
Q 025660           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      ++       ++|++|||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+... 
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~-  158 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWW-  158 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHHH-
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCC-
Confidence            76       68999999997543     12233458899999999998888754    34 579999999876433100 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecC-eEeCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPS-MVVGPF  202 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~-~v~g~~  202 (249)
                                         .+...|+.||.+.+.+.+.++.+.   |+++++|+|| .+.++.
T Consensus       159 -------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~  202 (274)
T 3e03_A          159 -------------------GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA  202 (274)
T ss_dssp             -------------------HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--
T ss_pred             -------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch
Confidence                               013579999999999988887763   7999999999 465554

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.92  E-value=3.5e-24  Score=175.63  Aligned_cols=168  Identities=17%  Similarity=0.144  Sum_probs=130.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR--------EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS   77 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999986        433332 2222223468899999999998887776 


Q ss_pred             ------CCCEEEEccccC-CC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPV-DF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~-~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            ++|+||||||.. ..     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.+    
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----  152 (262)
T 1zem_A           78 VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPP----  152 (262)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCT----
T ss_pred             HHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC----
Confidence                  689999999975 22     12233358899999999998887754    34 57999999987654321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                        +...|+.||...+.+.+.++.+   +|+++++|+||.+.++.
T Consensus       153 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  194 (262)
T 1zem_A          153 ------------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF  194 (262)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcch
Confidence                              1357999999988888887765   48999999999998875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.92  E-value=6.5e-24  Score=173.12  Aligned_cols=168  Identities=23%  Similarity=0.197  Sum_probs=130.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC-CCCCeEEEEcCC--CChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADL--SHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~Dl--~~~~~~~~~   79 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++.. ...++.++.+|+  ++++++.++
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   82 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNE--------EKLRQVASHINEETGRQPQWFILDLLTCTSENCQQL   82 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHH
Confidence            457999999999999999999999999999999987        4433321 1111 122578899999  999888887


Q ss_pred             Hc-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCC
Q 025660           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      ++       ++|++|||||....      ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.. 
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-  160 (252)
T 3f1l_A           83 AQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRA-  160 (252)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCT-
T ss_pred             HHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCC-
Confidence            76       68999999997422      1122234889999999999888874    444 67999999987643321 


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcC--CcEEEeecCeEeCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG--LDLVTLIPSMVVGPF  202 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~vrp~~v~g~~  202 (249)
                                           +...|+.||.+.+.+.+.++.+.+  ++++.|.||.|.++.
T Consensus       161 ---------------------~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~  201 (252)
T 3f1l_A          161 ---------------------NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM  201 (252)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch
Confidence                                 145799999999999999888763  999999999987763

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.92  E-value=8.7e-24  Score=173.35  Aligned_cols=169  Identities=20%  Similarity=0.116  Sum_probs=132.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        ++++.+ +++   +.+...+.+|++|+++++++++ 
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~--------~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~   96 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRK--------DVLDAAIAEI---GGGAVGIQADSANLAELDRLYEK   96 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999987        555443 333   3467889999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                            ++|++|||||....     ...+.++..+++|+.++.++.+++.+. ...++||++||..+..+.+.       
T Consensus        97 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~-------  169 (273)
T 4fgs_A           97 VKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA-------  169 (273)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC-------
Confidence                  57999999997544     122344589999999999999988754 11468999999876443322       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~  205 (249)
                                     ...|+.||.....+.+.++.+.   |++++.|.||.|.+|+...
T Consensus       170 ---------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~  213 (273)
T 4fgs_A          170 ---------------FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVE  213 (273)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-----
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHH
Confidence                           3579999999998888887774   7999999999999987543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.92  E-value=1.7e-24  Score=176.48  Aligned_cols=183  Identities=14%  Similarity=0.041  Sum_probs=138.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      |+|++|||||+|+||++++++|+++|++|++++|+..        +.           ....+.+|++|.+++.++++  
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~--------~~-----------~~~~~~~d~~d~~~v~~~~~~~   81 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN--------PN-----------ADHSFTIKDSGEEEIKSVIEKI   81 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--------TT-----------SSEEEECSCSSHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc--------cc-----------cccceEEEeCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999871        11           11357899999998888876  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCC
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                           ++|+||||||....      ...+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+        
T Consensus        82 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------  153 (251)
T 3orf_A           82 NSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS--------  153 (251)
T ss_dssp             HTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT--------
T ss_pred             HHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC--------
Confidence                 36999999997532      1112234789999999999999987642 135999999987653321        


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                    +...|+.||.+.+.+.+.++.+     +++++++|+||.|.++....           . ..    
T Consensus       154 --------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~-----------~-~~----  203 (251)
T 3orf_A          154 --------------GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRK-----------Y-MS----  203 (251)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHH-----------H-CT----
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhh-----------h-cc----
Confidence                          2457999999999999998877     47999999999998864211           1 11    


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                          ......++..+|+|+++.|
T Consensus       204 ----~~~~~~~~~~~dva~~i~~  222 (251)
T 3orf_A          204 ----DANFDDWTPLSEVAEKLFE  222 (251)
T ss_dssp             ----TSCGGGSBCHHHHHHHHHH
T ss_pred             ----cccccccCCHHHHHHHHHH
Confidence                1123456777888887765

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.91  E-value=8e-24  Score=178.98  Aligned_cols=200  Identities=15%  Similarity=0.033  Sum_probs=144.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEE-cCCCCcccCCchhhhhhc-cCC-CCCCCeEEEEcCCCChh------
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFLK-NLP-GASERLRIFHADLSHPD------   74 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~l~-~~~-~~~~~~~~~~~Dl~~~~------   74 (249)
                      +++++|||||+|+||++++++|+++|++|++++ |+.        ++.+.+. ++. ..+.++.++.+|++|++      
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~  116 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA--------AEANALSATLNARRPNSAITVQADLSNVATAPVSG  116 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccc
Confidence            457899999999999999999999999999999 876        3333321 111 12346889999999999      


Q ss_pred             -----------hHHHHHc-------CCCEEEEccccCCCC-----C--------------CChHHHhhhhHHhHHHHHHH
Q 025660           75 -----------GFDAAIA-------GCTGVLHVATPVDFE-----D--------------KEPEEVITQRAINGTLGILK  117 (249)
Q Consensus        75 -----------~~~~~~~-------~~d~vih~a~~~~~~-----~--------------~~~~~~~~~~n~~~t~~l~~  117 (249)
                                 ++.++++       .+|+||||||.....     .              .+.++..+++|+.++.++++
T Consensus       117 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  196 (328)
T 2qhx_A          117 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  196 (328)
T ss_dssp             ----CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence                       8888876       689999999975431     1              22234789999999999888


Q ss_pred             HHHhc---CC------cceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--
Q 025660          118 SCLKS---GT------VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--  186 (249)
Q Consensus       118 ~~~~~---~~------~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--  186 (249)
                      ++.+.   ..      .++||++||..++.+.+                      +...|+.||.+.+.+.+.++.+.  
T Consensus       197 ~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~----------------------~~~~Y~asKaal~~l~~~la~el~~  254 (328)
T 2qhx_A          197 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL----------------------GYTIYTMAKGALEGLTRSAALELAP  254 (328)
T ss_dssp             HHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHhcCCcCCCCCcEEEEECchhhccCCC----------------------CcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            77642   11      36999999987643221                      24579999999999999887764  


Q ss_pred             -CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccccccccc-ccchhhHHHhhhhc
Q 025660          187 -GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRS-HTLFVYAIAFAFAF  247 (249)
Q Consensus       187 -~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~d~a~a~~~  247 (249)
                       |+++++|+||.|.++. .. .+    .....+....+        .. .+...+|+|.+++|
T Consensus       255 ~gIrvn~v~PG~v~T~~-~~-~~----~~~~~~~~~~p--------~~~r~~~pedvA~~v~~  303 (328)
T 2qhx_A          255 LQIRVNGVGPGLSVLVD-DM-PP----AVWEGHRSKVP--------LYQRDSSAAEVSDVVIF  303 (328)
T ss_dssp             GTEEEEEEEESSBSCCC-CS-CH----HHHHHHHTTCT--------TTTSCBCHHHHHHHHHH
T ss_pred             cCcEEEEEecCcccCCc-cc-cH----HHHHHHHhhCC--------CCCCCCCHHHHHHHHHH
Confidence             8999999999999987 22 11    11121211111        12 35678888888765

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.91  E-value=9.8e-24  Score=170.68  Aligned_cols=196  Identities=19%  Similarity=0.169  Sum_probs=141.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      +|++|||||+|+||++++++|+++|++|++++|+.        ++..  +++     .+..+.+|+++ +++.++++   
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~--------~~~~--~~~-----~~~~~~~D~~~-~~~~~~~~~~~   65 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNP--------EEAA--QSL-----GAVPLPTDLEK-DDPKGLVKRAL   65 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------HHHH--HHH-----TCEEEECCTTT-SCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHH--Hhh-----CcEEEecCCch-HHHHHHHHHHH
Confidence            46899999999999999999999999999999987        3311  111     16789999999 77776654   


Q ss_pred             ----CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          ++|+||||||.....     ..+.++..+++|+.++.++++.+.    +.+ .++||++||..++.+..       
T Consensus        66 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------  137 (239)
T 2ekp_A           66 EALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGG-------  137 (239)
T ss_dssp             HHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCC-------
Confidence                689999999975431     122335889999999988888774    345 68999999987653320       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccc
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK  225 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (249)
                                   ..+...|+.||.+.+.+.+.++.+.   |+++++||||.+.++....... . .........     
T Consensus       138 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~-----  197 (239)
T 2ekp_A          138 -------------PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ-N-PELYEPITA-----  197 (239)
T ss_dssp             -------------TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-C-HHHHHHHHT-----
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc-C-HHHHHHHHh-----
Confidence                         0124679999999999998887764   8999999999999886321000 0 011111111     


Q ss_pred             ccccccccccchhhHHHhhhhc
Q 025660          226 ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         ......+...+|+|.+++|
T Consensus       198 ---~~p~~~~~~~~dvA~~~~~  216 (239)
T 2ekp_A          198 ---RIPMGRWARPEEIARVAAV  216 (239)
T ss_dssp             ---TCTTSSCBCHHHHHHHHHH
T ss_pred             ---cCCCCCCcCHHHHHHHHHH
Confidence               1123457788999988766

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=2.7e-24  Score=173.60  Aligned_cols=160  Identities=16%  Similarity=0.170  Sum_probs=126.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..        ...         ....++.+|++|++++.++++  
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------~~~---------~~~~~~~~D~~~~~~~~~~~~~~   64 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN--------DQA---------DSNILVDGNKNWTEQEQSILEQT   64 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC--------TTS---------SEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcc--------ccc---------cccEEEeCCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999872        111         135678899999998887775  


Q ss_pred             -------CCCEEEEccccCCCC------CCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCcccc
Q 025660           82 -------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                             ++|+||||||.....      ..+.++..+++|+.++.++++.+.+.- ..++||++||..++.+.+      
T Consensus        65 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------  138 (236)
T 1ooe_A           65 ASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP------  138 (236)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------
T ss_pred             HHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC------
Confidence                   689999999975421      112234789999999999999887642 136999999987653221      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-----CCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~vrp~~v~g~~  202 (249)
                                      +...|+.||.+.+.+.+.++.+.     ++++++|+||.+.++.
T Consensus       139 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  182 (236)
T 1ooe_A          139 ----------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  182 (236)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             ----------------CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc
Confidence                            24579999999999999988764     4999999999998874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.91  E-value=4e-24  Score=172.38  Aligned_cols=169  Identities=14%  Similarity=0.126  Sum_probs=131.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||+++++.|.++|++|++.+|+..      ++..+.+.+   .+.+...+.+|++|+++++++++  
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~------~~~~~~~~~---~g~~~~~~~~Dv~d~~~v~~~~~~g   78 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP------DETLDIIAK---DGGNASALLIDFADPLAAKDSFTDA   78 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC------HHHHHHHHH---TTCCEEEEECCTTSTTTTTTSSTTT
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH------HHHHHHHHH---hCCcEEEEEccCCCHHHHHHHHHhC
Confidence            5789999999999999999999999999999999861      122233332   34578899999999998888776  


Q ss_pred             CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccccCCCCC
Q 025660           82 GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (249)
Q Consensus        82 ~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (249)
                      ++|++|||||....     ...+.++..+++|+.++..+.+++.    +.+..++||++||..+..+.+.          
T Consensus        79 ~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~----------  148 (247)
T 4hp8_A           79 GFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR----------  148 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS----------
T ss_pred             CCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC----------
Confidence            48999999997654     1223345899999999888777643    3332579999999876543322          


Q ss_pred             CchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                  ...|+.||.....+.+.++.+   +|++++.|.||.|.+|..
T Consensus       149 ------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~  190 (247)
T 4hp8_A          149 ------------VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNT  190 (247)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             ------------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcch
Confidence                        357999999888877777666   489999999999998864

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.91  E-value=1.9e-24  Score=175.47  Aligned_cols=195  Identities=18%  Similarity=0.115  Sum_probs=124.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh---HH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG---FD   77 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~---~~   77 (249)
                      |+.++|++|||||+|+||++++++|++ |+.|++++|+.        +..+.+.+.    .++.++.+|+++.++   +.
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~--------~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~   67 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNP--------EHLAALAEI----EGVEPIESDIVKEVLEEGGV   67 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCH--------HHHHHHHTS----TTEEEEECCHHHHHHTSSSC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCH--------HHHHHHHhh----cCCcceecccchHHHHHHHH
Confidence            666788999999999999999999987 99999999987        555555443    358899999988754   22


Q ss_pred             HHHc---CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCccc
Q 025660           78 AAIA---GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        78 ~~~~---~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      +.++   ++|+||||||.....     ..+.++..+++|+.++.++++.+.+.   . .++||++||..++.+.+     
T Consensus        68 ~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  141 (245)
T 3e9n_A           68 DKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA-SGCVIYINSGAGNGPHP-----  141 (245)
T ss_dssp             GGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEC--------------
T ss_pred             HHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEcCcccccCCC-----
Confidence            2222   589999999986541     11223478999999988877776532   1 26999999988754332     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK  223 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (249)
                                       +...|+.||.+.+.+.+.++.+   +|+++++++||.+.++........       .      
T Consensus       142 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~------  191 (245)
T 3e9n_A          142 -----------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS-------Q------  191 (245)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh-------h------
Confidence                             1457999999999999988876   489999999999999865332110       0      


Q ss_pred             ccccccccccccchhhHHHhhhhc
Q 025660          224 LKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       224 ~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                         ........++..+|+|.++.|
T Consensus       192 ---~~~~~~~~~~~p~dvA~~i~~  212 (245)
T 3e9n_A          192 ---GTNFRPEIYIEPKEIANAIRF  212 (245)
T ss_dssp             -------CCGGGSCHHHHHHHHHH
T ss_pred             ---hcccccccCCCHHHHHHHHHH
Confidence               011122357788999998866

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.91  E-value=4.8e-24  Score=176.52  Aligned_cols=200  Identities=18%  Similarity=0.102  Sum_probs=144.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.+..  +.++.++.+|++|.+++.++++  
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA--------EKGKALADEL--GNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987        4444432221  3468999999999999988876  


Q ss_pred             ----CCCEEEEc-cccCCCC----------CCChHHHhhhhHHhHHHHHHHHHHhc---------CCcceEEEEccccee
Q 025660           82 ----GCTGVLHV-ATPVDFE----------DKEPEEVITQRAINGTLGILKSCLKS---------GTVKRVVYTSSNAAV  137 (249)
Q Consensus        82 ----~~d~vih~-a~~~~~~----------~~~~~~~~~~~n~~~t~~l~~~~~~~---------~~~~~~v~~SS~~~~  137 (249)
                          ++|++||| |+.....          ..+.++..+++|+.++.++++.+...         +..++||++||..++
T Consensus        99 ~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  178 (281)
T 3ppi_A           99 NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY  178 (281)
T ss_dssp             TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT
T ss_pred             HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc
Confidence                47999999 4443221          11123588999999999998877532         124699999998765


Q ss_pred             eccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHH
Q 025660          138 FYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSS  214 (249)
Q Consensus       138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~  214 (249)
                      .+.+                      +...|+.||.+.+.+.+.++.+.   |+++++|+||.|.++........   ..
T Consensus       179 ~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~  233 (281)
T 3ppi_A          179 EGQI----------------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEE---AL  233 (281)
T ss_dssp             SCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHH---HH
T ss_pred             CCCC----------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHH---HH
Confidence            4321                      24579999999998888887764   89999999999988754322111   11


Q ss_pred             HHHHcCCCcccccccccc-cccchhhHHHhhhhc
Q 025660          215 LALILGNVKLKICCVMNR-SHTLFVYAIAFAFAF  247 (249)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~-~~~i~v~d~a~a~~~  247 (249)
                      ....         ..... ..+...+|+|.++.|
T Consensus       234 ~~~~---------~~~~~~~~~~~pedvA~~v~~  258 (281)
T 3ppi_A          234 AKFA---------ANIPFPKRLGTPDEFADAAAF  258 (281)
T ss_dssp             HHHH---------HTCCSSSSCBCHHHHHHHHHH
T ss_pred             HHHH---------hcCCCCCCCCCHHHHHHHHHH
Confidence            1111         11122 457888999988876

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.91  E-value=6.1e-23  Score=174.59  Aligned_cols=175  Identities=15%  Similarity=0.170  Sum_probs=129.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhh-hhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..... +..... ...+++...+.++.++.+|++|+++++++++ 
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~-~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHP-KLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCS-SSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhh-hhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999872100 000001 1112222234578899999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|+||||||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||...+.+...    
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~~----  197 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWF----  197 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGGT----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCCC----
Confidence                  68999999997543     11233358899999999999998853    34 579999999876533101    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCe-EeC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSM-VVG  200 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~-v~g  200 (249)
                                      .+...|+.||...+.+.+.++.+.  ++++++|.||. +.+
T Consensus       198 ----------------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T  238 (346)
T 3kvo_A          198 ----------------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT  238 (346)
T ss_dssp             ----------------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc
Confidence                            124579999999999999888874  79999999995 443

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=8.2e-24  Score=173.86  Aligned_cols=166  Identities=16%  Similarity=0.057  Sum_probs=124.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++..  .+.++.++.+|++|++++.+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL--------EAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF   77 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHH
Confidence            357899999999999999999999999999999986        333221 11111  1236889999999999988887


Q ss_pred             c-------CCCEEEEccccCCCCCCChHHHhhhhHHhHHHH----HHHHHHhcC--CcceEEEEcccceeeccCCCcccc
Q 025660           81 A-------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLG----ILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~----l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                      +       ++|+||||||....  +++. ..+++|+.++..    +++.+++.+  ..++||++||..++.+.+      
T Consensus        78 ~~~~~~~g~id~lv~~Ag~~~~--~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  148 (267)
T 2gdz_A           78 RKVVDHFGRLDILVNNAGVNNE--KNWE-KTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA------  148 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCS--SSHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------
T ss_pred             HHHHHHcCCCCEEEECCCCCCh--hhHH-HHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC------
Confidence            6       47999999997543  4454 889999886555    455554432  147999999987643321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHH--H---HcCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA--E---EHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~--~---~~~~~~~~vrp~~v~g~~  202 (249)
                                      +...|+.||...+.+.+.++  .   .+++++++|+||.+.++.
T Consensus       149 ----------------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~  192 (267)
T 2gdz_A          149 ----------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  192 (267)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchh
Confidence                            13579999999998887642  2   258999999999998875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.91  E-value=2.5e-24  Score=181.08  Aligned_cols=190  Identities=15%  Similarity=0.103  Sum_probs=134.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      |+++||||||||+||++++++|+++|++|++++|+..       .+.+.+..+..  .+++++.+|++|++++.++++++
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-------~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~~~   80 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS-------SKTTLLDEFQS--LGAIIVKGELDEHEKLVELMKKV   80 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC-------SCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC-------chhhHHHHhhc--CCCEEEEecCCCHHHHHHHHcCC
Confidence            3458999999999999999999999999999999871       12121211111  25789999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+|||+++...              +.+++++++++++.+.+++||+ |+   ++...      +|..+..+.       
T Consensus        81 d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~------~~~~~~~p~-------  129 (318)
T 2r6j_A           81 DVVISALAFPQ--------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEE------DRINALPPF-------  129 (318)
T ss_dssp             SEEEECCCGGG--------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCT------TTCCCCHHH-------
T ss_pred             CEEEECCchhh--------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCc------ccccCCCCc-------
Confidence            99999998631              4567899999998764788885 43   32211      222221110       


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHH-HcCCCcccccccccccccchhhHHH
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                       ...| .+|..+|.+++.    .+++++++||+.++++.        +..+... ..++....++.++..++|++++|++
T Consensus       130 -~~~y-~sK~~~e~~~~~----~~~~~~~lr~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  195 (318)
T 2r6j_A          130 -EALI-ERKRMIRRAIEE----ANIPYTYVSANCFASYF--------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIG  195 (318)
T ss_dssp             -HHHH-HHHHHHHHHHHH----TTCCBEEEECCEEHHHH--------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHH
T ss_pred             -chhH-HHHHHHHHHHHh----cCCCeEEEEcceehhhh--------hhhhccccCCCCceEEecCCCceeeEeeHHHHH
Confidence             2468 999999988764    68999999999887641        1122211 1223333446777889999999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      ++++.
T Consensus       196 ~~~~~  200 (318)
T 2r6j_A          196 LYTIK  200 (318)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.91  E-value=5.2e-24  Score=178.12  Aligned_cols=198  Identities=18%  Similarity=0.183  Sum_probs=137.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++|+||||||+||++++++|+++|++|++++|+....  ...++.+.+..+.  ..+++++.+|++|++++.++++++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~--~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~   78 (308)
T 1qyc_A            3 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTAS--SNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNV   78 (308)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTT--TTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccc--cCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcCC
Confidence            357899999999999999999999999999999986200  0011222222211  135789999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+|||+++...              +.++.+++++|++.+.+++||+ |+   ++...      +|..+..         
T Consensus        79 d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~------~~~~~~~---------  125 (308)
T 1qyc_A           79 DVVISTVGSLQ--------------IESQVNIIKAIKEVGTVKRFFP-SE---FGNDV------DNVHAVE---------  125 (308)
T ss_dssp             SEEEECCCGGG--------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT------TSCCCCT---------
T ss_pred             CEEEECCcchh--------------hhhHHHHHHHHHhcCCCceEee-cc---cccCc------cccccCC---------
Confidence            99999998632              4567899999998865789884 44   32211      1222211         


Q ss_pred             C-CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHH
Q 025660          164 W-GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       164 ~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                      | ...| .+|..+|.+++.    .+++++++||+.++|+........    ......++....++.++..++|++++|++
T Consensus       126 p~~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (308)
T 1qyc_A          126 PAKSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQA----GLTAPPRDKVVILGDGNARVVFVKEEDIG  196 (308)
T ss_dssp             THHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCT----TCSSCCSSEEEEETTSCCEEEEECHHHHH
T ss_pred             cchhHH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccc----cccCCCCCceEEecCCCceEEEecHHHHH
Confidence            1 2468 999999988764    589999999999988643221110    00001222333446778889999999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      ++++.
T Consensus       197 ~~~~~  201 (308)
T 1qyc_A          197 TFTIK  201 (308)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            98864

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.91  E-value=1.8e-23  Score=169.73  Aligned_cols=168  Identities=20%  Similarity=0.187  Sum_probs=128.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC-CCCCeEEEEcCC--CChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADL--SHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~Dl--~~~~~~~~~   79 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++.. ...+..++.+|+  ++.+++.++
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~   84 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTE--------ASLAEVSDQIKSAGQPQPLIIALNLENATAQQYREL   84 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCH--------HHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHH
Confidence            457899999999999999999999999999999987        4433321 1111 113567777777  999888777


Q ss_pred             Hc-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCC
Q 025660           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      ++       ++|+||||||....      ...+.++..+++|+.++.++++.+.    +.+ .++||++||..++.+.+ 
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-  162 (247)
T 3i1j_A           85 AARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRA-  162 (247)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCT-
T ss_pred             HHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCC-
Confidence            65       68999999997532      1223345889999999999988874    334 57999999987643321 


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeecCeEeCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~v~g~~  202 (249)
                                           +...|+.||.+.+.+.+.++.+    .+++++.|+||.+.++.
T Consensus       163 ---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~  205 (247)
T 3i1j_A          163 ---------------------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM  205 (247)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH
T ss_pred             ---------------------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc
Confidence                                 2457999999999999988776    37999999999887753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.91  E-value=8.2e-24  Score=171.36  Aligned_cols=160  Identities=16%  Similarity=0.107  Sum_probs=126.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..        ...         .....+.+|++|++++.++++  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--------~~~---------~~~~~~~~D~~~~~~v~~~~~~~   68 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN--------EEA---------SASVIVKMTDSFTEQADQVTAEV   68 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC--------TTS---------SEEEECCCCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh--------hcc---------CCcEEEEcCCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999871        111         135678899999998888775  


Q ss_pred             -------CCCEEEEccccCCCC---C---CChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCcccc
Q 025660           82 -------GCTGVLHVATPVDFE---D---KEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~---~---~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                             ++|+||||||.....   .   .+.++..+++|+.++.++++++.+.- ..++||++||..++.+.+      
T Consensus        69 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  142 (241)
T 1dhr_A           69 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP------  142 (241)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------
T ss_pred             HHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC------
Confidence                   689999999975421   1   12234788999999999999887641 136999999987653321      


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~  202 (249)
                                      +...|+.||.+.+.+.+.++.+     +++++++|+||.+.++.
T Consensus       143 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~  186 (241)
T 1dhr_A          143 ----------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM  186 (241)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc
Confidence                            2457999999999999988765     35999999999998864

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.91  E-value=2.1e-23  Score=171.28  Aligned_cols=207  Identities=14%  Similarity=0.100  Sum_probs=148.3

Q ss_pred             CCCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .+++++|||||+  |+||++++++|+++|++|++++|+...   ...+..+.+.+.  .+.++.++.+|++|++++++++
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~   92 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQ---GAEENVKELEKT--YGIKAKAYKCQVDSYESCEKLV   92 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSS---HHHHHHHHHHHH--HCCCEECCBCCTTCHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcch---hHHHHHHHHHHh--cCCceeEEecCCCCHHHHHHHH
Confidence            356899999999  899999999999999999999988620   001112222211  1347889999999999988887


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||.....     ..+.++..+++|+.++.++++.+    ++.+ .++||++||..++.....  
T Consensus        93 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--  169 (267)
T 3gdg_A           93 KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFP--  169 (267)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSS--
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCC--
Confidence            6       579999999976541     22333588999999999988877    3445 579999999876433210  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcC--CcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG--LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV  222 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (249)
                                        .+...|+.||.+.+.+.+.++.+.+  ++++.+.||.+.++.......    .....+    
T Consensus       170 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~----  223 (267)
T 3gdg_A          170 ------------------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPK----ETQQLW----  223 (267)
T ss_dssp             ------------------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCH----HHHHHH----
T ss_pred             ------------------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCH----HHHHHH----
Confidence                              1246799999999999999888753  899999999999987543211    112211    


Q ss_pred             cccccccccccccchhhHHHhhhhc
Q 025660          223 KLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       223 ~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                          ........+...+|+|.++.|
T Consensus       224 ----~~~~~~~r~~~~~dva~~~~~  244 (267)
T 3gdg_A          224 ----HSMIPMGRDGLAKELKGAYVY  244 (267)
T ss_dssp             ----HTTSTTSSCEETHHHHHHHHH
T ss_pred             ----HhcCCCCCCcCHHHHHhHhhe
Confidence                122334566778888888765

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.91  E-value=7.4e-24  Score=172.95  Aligned_cols=204  Identities=12%  Similarity=0.033  Sum_probs=133.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHH-H---H
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA-A---I   80 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~-~---~   80 (249)
                      ||++|||||+|+||++++++|+++|++|++++|+.        ++.+.+.++...+.++..+  |..+.+.+.+ +   +
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~   70 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESF--------KQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAY   70 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG--------GSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHH
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHh
Confidence            35899999999999999999999999999999987        3333222111112233333  4444333222 1   2


Q ss_pred             cCCCEEEEccccC-CC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccccCCC
Q 025660           81 AGCTGVLHVATPV-DF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        81 ~~~d~vih~a~~~-~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                      .++|+||||||.. ..     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+         
T Consensus        71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  140 (254)
T 1zmt_A           71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWK---------  140 (254)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCT---------
T ss_pred             CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCC---------
Confidence            2689999999976 32     1123335889999999999888775    344 57999999987643321         


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-cc-c
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-KL-K  225 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~-~  225 (249)
                                   +...|+.||.+.+.+.+.++.+.   ++++++|+||.|+||........  ...    .... .. .
T Consensus       141 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T--~~~----~~~~~~~~~  201 (254)
T 1zmt_A          141 -------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPT--EPW----KTNPEHVAH  201 (254)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBH--HHH----TTCHHHHHH
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCC--ccc----ccChHHHHH
Confidence                         24579999999999998887763   89999999999988875432111  010    0000 00 0


Q ss_pred             ccccccccccchhhHHHhhhhc
Q 025660          226 ICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       226 ~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      +........+...+|+|.++.|
T Consensus       202 ~~~~~p~~~~~~p~dvA~~v~~  223 (254)
T 1zmt_A          202 VKKVTALQRLGTQKELGELVAF  223 (254)
T ss_dssp             HHHHSSSSSCBCHHHHHHHHHH
T ss_pred             HhccCCCCCCcCHHHHHHHHHH
Confidence            1111223346788899888765

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.90  E-value=2.3e-23  Score=176.08  Aligned_cols=172  Identities=18%  Similarity=0.143  Sum_probs=129.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hcc---CCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKN---LPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~---~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +++||||||+|+||++++++|+++|++|++++|+..     ..+.... +..   ....+.++.++.+|++|++++.+++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   76 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLR-----DLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAAR   76 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEES-----CGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecC-----cHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHH
Confidence            578999999999999999999999999988888651     1111111 111   1122346889999999999999998


Q ss_pred             cC-----CCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccc
Q 025660           81 AG-----CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        81 ~~-----~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      +.     +|+||||||....     ...+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.+     
T Consensus        77 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~-----  150 (327)
T 1jtv_A           77 ERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLP-----  150 (327)
T ss_dssp             HTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCT-----
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCC-----
Confidence            75     8999999997533     112234588999999999998886    3445 68999999987643321     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                       ....|+.||.+.+.+.+.++.+   +|+++++|+||.|.++...
T Consensus       151 -----------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~  194 (327)
T 1jtv_A          151 -----------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFME  194 (327)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC----
T ss_pred             -----------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHh
Confidence                             1357999999999999988775   5899999999999998753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.90  E-value=1.7e-23  Score=173.82  Aligned_cols=170  Identities=16%  Similarity=0.138  Sum_probs=128.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCC-CCCCCeEEEEcCCCC----hhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSH----PDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~-~~~~~~~~~~~Dl~~----~~~~~   77 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       ++.+.+ .++. ..+.++.++.+|+++    ++++.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~-------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~   94 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSA-------EAAVSLADELNKERSNTAVVCQADLTNSNVLPASCE   94 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCH-------HHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCch-------HHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHH
Confidence            4578999999999999999999999999999999751       111111 1111 123468899999999    88888


Q ss_pred             HHHc-------CCCEEEEccccCCCC-------CC--------ChHHHhhhhHHhHHHHHHHHHHhcC---C------cc
Q 025660           78 AAIA-------GCTGVLHVATPVDFE-------DK--------EPEEVITQRAINGTLGILKSCLKSG---T------VK  126 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~-------~~--------~~~~~~~~~n~~~t~~l~~~~~~~~---~------~~  126 (249)
                      ++++       ++|+||||||.....       .+        +.++..+++|+.++.++++.+.+.-   .      .+
T Consensus        95 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g  174 (288)
T 2x9g_A           95 EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL  174 (288)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCE
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCe
Confidence            7776       689999999975431       11        1234778999999999988876531   1      35


Q ss_pred             eEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       127 ~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                      +||++||..++.+.+                      +...|+.||.+.+.+.+.++.+.   |+++++|+||.|+++.
T Consensus       175 ~iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          175 SIVNLCDAMVDQPCM----------------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             EEEEECCTTTTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             EEEEEecccccCCCC----------------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            999999987643221                      24579999999998888887763   8999999999999997

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.90  E-value=2.8e-23  Score=173.61  Aligned_cols=197  Identities=15%  Similarity=0.106  Sum_probs=135.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCc-hhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNS-KDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      |++||||||||+||++++++|+++|++|++++|+...  .... ++.+.+..+.  ..+++++.+|++|++++.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTIT--AANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIKQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCC--SSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcc--cCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHhCC
Confidence            4689999999999999999999999999999997510  0001 1122221111  125789999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+|||+|+...              +.++.++++++++.+.+++||+ |+   ++...      +|..+.         .
T Consensus        78 d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~------~~~~~~---------~  124 (307)
T 2gas_A           78 DIVICAAGRLL--------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDV------DRHDAV---------E  124 (307)
T ss_dssp             SEEEECSSSSC--------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT------TSCCCC---------T
T ss_pred             CEEEECCcccc--------------cccHHHHHHHHHhcCCceEEee-cc---cccCc------ccccCC---------C
Confidence            99999999632              4567899999998764789883 43   32211      112211         1


Q ss_pred             C-CchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHH
Q 025660          164 W-GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIA  242 (249)
Q Consensus       164 ~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a  242 (249)
                      | .+.| .+|..+|.+++.    .+++++++||+.++++........    ......++....++.++..++|++++|++
T Consensus       125 p~~~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  195 (307)
T 2gas_A          125 PVRQVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRNLAQL----DATDPPRDKVVILGDGNVKGAYVTEADVG  195 (307)
T ss_dssp             THHHHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGGTTCT----TCSSCCSSEEEEETTSCSEEEEECHHHHH
T ss_pred             cchhHH-HHHHHHHHHHHH----cCCCeEEEEcceeecccccccccc----ccccCCCCeEEEecCCCcceEEeeHHHHH
Confidence            2 3469 999999988764    589999999999988653221110    00001122222346677889999999999


Q ss_pred             hhhhc
Q 025660          243 FAFAF  247 (249)
Q Consensus       243 ~a~~~  247 (249)
                      ++++.
T Consensus       196 ~~~~~  200 (307)
T 2gas_A          196 TFTIR  200 (307)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.90  E-value=1.4e-23  Score=174.10  Aligned_cols=168  Identities=15%  Similarity=0.080  Sum_probs=128.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCC-CCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+.+. ++.. ...++.++.+|++|++++.++++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   98 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK--------ETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA   98 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence            457899999999999999999999999999999986        4433321 1111 11257899999999998888776


Q ss_pred             -------CCCEEEEc-cccCCCC----CCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCccc
Q 025660           82 -------GCTGVLHV-ATPVDFE----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 -------~~d~vih~-a~~~~~~----~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                             ++|+|||| ||.....    ..+..+..+++|+.++.++++++.+.   + .++||++||..++.+.+     
T Consensus        99 ~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  172 (286)
T 1xu9_A           99 QAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYP-----  172 (286)
T ss_dssp             HHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCT-----
T ss_pred             HHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCC-----
Confidence                   68999999 5654321    11223478999999999988877543   2 36999999987643221     


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-----CCcEEEeecCeEeCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~vrp~~v~g~~  202 (249)
                                       +...|+.||...+.+.+.++.+.     ++++++++||.+.++.
T Consensus       173 -----------------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~  216 (286)
T 1xu9_A          173 -----------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  216 (286)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             -----------------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh
Confidence                             24579999999999888876654     8999999999998874

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.90  E-value=1.5e-23  Score=176.40  Aligned_cols=195  Identities=13%  Similarity=0.086  Sum_probs=135.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +||+|+||||||+||++++++|+++|++|++++|+...  ....++.+.+..+.  ..+++++.+|++|++++.++++++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~~~   78 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTP--DSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLKQV   78 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCT--TCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCccc--ccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHcCC
Confidence            45789999999999999999999999999999997510  00011222222111  125789999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+|||+++...              +.++++++++|++.+.+++||+ |+   ++...      +|..+..+.       
T Consensus        79 d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~------~~~~~~~p~-------  127 (321)
T 3c1o_A           79 DIVISALPFPM--------------ISSQIHIINAIKAAGNIKRFLP-SD---FGCEE------DRIKPLPPF-------  127 (321)
T ss_dssp             SEEEECCCGGG--------------SGGGHHHHHHHHHHCCCCEEEC-SC---CSSCG------GGCCCCHHH-------
T ss_pred             CEEEECCCccc--------------hhhHHHHHHHHHHhCCccEEec-cc---cccCc------cccccCCCc-------
Confidence            99999998631              5667899999998764688883 33   32211      122221110       


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHH----HHcCCCcccccccccccccchhh
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA----LILGNVKLKICCVMNRSHTLFVY  239 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~  239 (249)
                       .+.| .+|..+|.+++.    .+++++++||+.++++..        ..+..    ...++....++.++..++|++++
T Consensus       128 -~~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (321)
T 3c1o_A          128 -ESVL-EKKRIIRRAIEA----AALPYTYVSANCFGAYFV--------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEE  193 (321)
T ss_dssp             -HHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHH--------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHH
T ss_pred             -chHH-HHHHHHHHHHHH----cCCCeEEEEeceeccccc--------cccccccccccccCceEEecCCCcceeEeeHH
Confidence             2469 999999988864    589999999999887531        11111    01222333456778889999999


Q ss_pred             HHHhhhhc
Q 025660          240 AIAFAFAF  247 (249)
Q Consensus       240 d~a~a~~~  247 (249)
                      |+++++++
T Consensus       194 Dva~~~~~  201 (321)
T 3c1o_A          194 DIAKYTIK  201 (321)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.90  E-value=5.6e-23  Score=168.28  Aligned_cols=169  Identities=19%  Similarity=0.196  Sum_probs=126.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ .++...+.++.++.+|++|++++.++++ 
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHL--------DTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQ   75 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999986        333322 1211113467889999999998877754 


Q ss_pred             -------CCCEEEEccc--cC--------CC--CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceee
Q 025660           82 -------GCTGVLHVAT--PV--------DF--EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVF  138 (249)
Q Consensus        82 -------~~d~vih~a~--~~--------~~--~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~  138 (249)
                             ++|+||||||  ..        ..  ...+.++..+++|+.++.++.+.+.    +.+ .++||++||..++.
T Consensus        76 ~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~  154 (260)
T 2qq5_A           76 VDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQ  154 (260)
T ss_dssp             HHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTS
T ss_pred             HHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcC
Confidence                   4699999994  22        11  1223344888999998877666553    445 58999999987542


Q ss_pred             ccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          139 YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       139 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      +.                       +...|+.||...+.+.+.++.+   +|+++++|+||.|.++...
T Consensus       155 ~~-----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  200 (260)
T 2qq5_A          155 YM-----------------------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLK  200 (260)
T ss_dssp             CC-----------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-
T ss_pred             CC-----------------------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHH
Confidence            11                       2357999999999999888765   4899999999999998743

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.90  E-value=1.9e-22  Score=164.85  Aligned_cols=175  Identities=13%  Similarity=0.058  Sum_probs=131.2

Q ss_pred             CCCCCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC-CC-CCCCeEEEEcCCCChhhH
Q 025660            1 MEEGKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-PG-ASERLRIFHADLSHPDGF   76 (249)
Q Consensus         1 m~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~~Dl~~~~~~   76 (249)
                      |..++|++|||||+|  +||++++++|+++|++|++.+|++        +..+.+.+. .+ ...++..+.+|+++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   73 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE--------RSRKELEKLLEQLNQPEAHLYQIDVQSDEEV   73 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence            345789999999876  899999999999999999999987        333322211 11 224688999999999988


Q ss_pred             HHHHc-------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeec
Q 025660           77 DAAIA-------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFY  139 (249)
Q Consensus        77 ~~~~~-------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~  139 (249)
                      .++++       ++|++|||||....         ...+.+...+++|+.++..+.+.+.... ..++||++||..+..+
T Consensus        74 ~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~  153 (256)
T 4fs3_A           74 INGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA  153 (256)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC
Confidence            88776       58999999997532         1112223567889999888888776542 2479999999876433


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                      .+.                      ...|+.||...+.+.+.++.+   +|++++.|.||.+.+|....
T Consensus       154 ~~~----------------------~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~  200 (256)
T 4fs3_A          154 VQN----------------------YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKG  200 (256)
T ss_dssp             CTT----------------------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT
T ss_pred             ccc----------------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhh
Confidence            321                      357999999888888877766   48999999999999887543

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.90  E-value=4.8e-23  Score=171.45  Aligned_cols=169  Identities=16%  Similarity=0.074  Sum_probs=130.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEE-cCCCCcccCCchhhhhh-ccCC-CCCCCeEEEEcCCCChh------
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHPD------   74 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~l-~~~~-~~~~~~~~~~~Dl~~~~------   74 (249)
                      ++|++|||||+|+||++++++|+++|++|++++ |+.        +..+.+ .++. ..+.++.++.+|+++++      
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA--------AEANALSATLNARRPNSAITVQADLSNVATAPVSG   79 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCH--------HHHHHHHHHHhhhcCCeeEEEEeecCCcccccccc
Confidence            457899999999999999999999999999999 876        333322 1111 12346889999999999      


Q ss_pred             -----------hHHHHHc-------CCCEEEEccccCCCC-----C--------------CChHHHhhhhHHhHHHHHHH
Q 025660           75 -----------GFDAAIA-------GCTGVLHVATPVDFE-----D--------------KEPEEVITQRAINGTLGILK  117 (249)
Q Consensus        75 -----------~~~~~~~-------~~d~vih~a~~~~~~-----~--------------~~~~~~~~~~n~~~t~~l~~  117 (249)
                                 ++.++++       ++|++|||||.....     .              .+.++..+++|+.++.++++
T Consensus        80 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  159 (291)
T 1e7w_A           80 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  159 (291)
T ss_dssp             ---CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHH
Confidence                       8888876       689999999975431     1              22334789999999999888


Q ss_pred             HHHhc---CC------cceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---
Q 025660          118 SCLKS---GT------VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---  185 (249)
Q Consensus       118 ~~~~~---~~------~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---  185 (249)
                      ++.+.   ..      .++||++||..++.+.+                      +...|+.||...+.+.+.++.+   
T Consensus       160 ~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~----------------------~~~~Y~asKaa~~~l~~~la~e~~~  217 (291)
T 1e7w_A          160 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL----------------------GYTIYTMAKGALEGLTRSAALELAP  217 (291)
T ss_dssp             HHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHhcCCCCCCCCcEEEEEechhhcCCCC----------------------CCchhHHHHHHHHHHHHHHHHHHHh
Confidence            87642   11      37999999987643321                      2457999999999999888776   


Q ss_pred             cCCcEEEeecCeEeCCC
Q 025660          186 HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       186 ~~~~~~~vrp~~v~g~~  202 (249)
                      +++++++|+||.|.++.
T Consensus       218 ~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          218 LQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             GTEEEEEEEESSBCCGG
T ss_pred             cCeEEEEEeeCCccCCc
Confidence            38999999999998886

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.90  E-value=9.2e-23  Score=170.67  Aligned_cols=193  Identities=18%  Similarity=0.190  Sum_probs=134.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh-hccCCC-CCCCeEEEEcCCCCh-hhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG-ASERLRIFHADLSHP-DGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~~~~-~~~~~~~~~~Dl~~~-~~~~~~~   80 (249)
                      +++++|||||+|+||++++++|+++|++|++++|+.        ++.+. +.++.. .+.++.++.+|++++ +++.+++
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~   82 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDV--------TKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLA   82 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHH
Confidence            457899999999999999999999999999999987        33322 222222 234789999999998 7777766


Q ss_pred             c-------CCCEEEEccccCCC-----------------------------------CCCChHHHhhhhHHhHHHHHHHH
Q 025660           81 A-------GCTGVLHVATPVDF-----------------------------------EDKEPEEVITQRAINGTLGILKS  118 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----------------------------------~~~~~~~~~~~~n~~~t~~l~~~  118 (249)
                      +       ++|+||||||....                                   ...+..+..+++|+.|+.++++.
T Consensus        83 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  162 (311)
T 3o26_A           83 DFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEV  162 (311)
T ss_dssp             HHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHH
Confidence            5       68999999997632                                   01122346799999998888887


Q ss_pred             HHh----cCCcceEEEEcccceeeccCCCcc----ccCCCCCCchh-----------H------hhhcCCCCchHHHHHH
Q 025660          119 CLK----SGTVKRVVYTSSNAAVFYNDKDVD----MMDETFWSDVD-----------Y------IRKLDSWGKSYAISKT  173 (249)
Q Consensus       119 ~~~----~~~~~~~v~~SS~~~~~~~~~~~~----~~~e~~~~~~~-----------~------~~~~~~~~~~Y~~sK~  173 (249)
                      +.+    .+ .++||++||..++.+......    ..+++.+....           +      ....+.+...|+.||.
T Consensus       163 ~~~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~  241 (311)
T 3o26_A          163 LIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA  241 (311)
T ss_dssp             HHHHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH
T ss_pred             hhHhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH
Confidence            753    34 579999999876544311000    00000000000           0      0000123467999999


Q ss_pred             HHHHHHHHHHHHc-CCcEEEeecCeEeCCCCCC
Q 025660          174 LTERAALEFAEEH-GLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       174 ~~e~~~~~~~~~~-~~~~~~vrp~~v~g~~~~~  205 (249)
                      +.+.+.+.++.+. ++++++|+||.|.++....
T Consensus       242 a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~  274 (311)
T 3o26_A          242 CLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG  274 (311)
T ss_dssp             HHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT
T ss_pred             HHHHHHHHHHhhcCCceEEEecCCceecCCcCC
Confidence            9999999998885 7999999999999987544

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.90  E-value=1.4e-22  Score=165.70  Aligned_cols=161  Identities=17%  Similarity=0.152  Sum_probs=124.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+..                 +...+...+.+|++++++++++++  
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~-----------------~~~~~~~~~~~Dv~~~~~v~~~~~~~   72 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARP-----------------EGLPEELFVEADLTTKEGCAIVAEAT   72 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC-----------------TTSCTTTEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCch-----------------hCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            5689999999999999999999999999999999861                 111123468999999998888776  


Q ss_pred             -----CCCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -----GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                           ++|++|||||....       ...+.++..+++|+.++.++.+.+    ++.+ .++||++||..+..+.+.   
T Consensus        73 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~---  148 (261)
T 4h15_A           73 RQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPE---  148 (261)
T ss_dssp             HHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT---
T ss_pred             HHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCC---
Confidence                 48999999996432       122334588999999887776655    4455 579999999875433211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                        ....|+.||...+.+.+.++.+   +|++++.|.||.|.+|..
T Consensus       149 ------------------~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~  191 (261)
T 4h15_A          149 ------------------STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEAS  191 (261)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred             ------------------ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcch
Confidence                              1356999999888888877766   489999999999988753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.89  E-value=3.8e-22  Score=164.10  Aligned_cols=166  Identities=11%  Similarity=0.025  Sum_probs=129.3

Q ss_pred             CCCeEEEecc--chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchh-hhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-LSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|++|||||  +|+||++++++|+++|++|++++|+.        ++ .+.+.+..  +.++.++.+|++|++++.+++
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~   75 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR--------LRLIQRITDRL--PAKAPLLELDVQNEEHLASLA   75 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC--------HHHHHHHHTTS--SSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh--------HHHHHHHHHhc--CCCceEEEccCCCHHHHHHHH
Confidence            4578999999  99999999999999999999999987        33 23332221  235778999999999988887


Q ss_pred             c----------CCCEEEEccccCC-----C-----CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeec
Q 025660           81 A----------GCTGVLHVATPVD-----F-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFY  139 (249)
Q Consensus        81 ~----------~~d~vih~a~~~~-----~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~  139 (249)
                      +          ++|+||||||...     .     ...+.++..+++|+.++.++++++.+.- ..++||++||...+ +
T Consensus        76 ~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-~  154 (269)
T 2h7i_A           76 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-A  154 (269)
T ss_dssp             HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-C
T ss_pred             HHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-c
Confidence            6          7899999999754     1     1122334789999999999999997642 13699999996531 1


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                      .                      .+...|+.||...+.+.+.++.+.   |+++++|+||.+.++.
T Consensus       155 ~----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  198 (269)
T 2h7i_A          155 M----------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLA  198 (269)
T ss_dssp             C----------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHH
T ss_pred             c----------------------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchh
Confidence            1                      013579999999999988887663   8999999999998864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.89  E-value=1e-22  Score=166.57  Aligned_cols=169  Identities=20%  Similarity=0.159  Sum_probs=129.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHH---CCCeEEEEEcCCCCcccCCchhhhhhc-cCCC--CCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLD---HGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG--ASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~--~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++|++|||||+|+||++++++|++   +|++|++++|+.        +..+.+. ++..  .+.++.++.+|++|++++.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~   76 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE--------SMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ   76 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCH--------HHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCH--------HHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHH
Confidence            457899999999999999999999   899999999986        4433321 1111  1346889999999999888


Q ss_pred             HHHc---------CCC--EEEEccccCCC--------CCCChHHHhhhhHHhHHHHHHHHHHhcC-----CcceEEEEcc
Q 025660           78 AAIA---------GCT--GVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSCLKSG-----TVKRVVYTSS  133 (249)
Q Consensus        78 ~~~~---------~~d--~vih~a~~~~~--------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-----~~~~~v~~SS  133 (249)
                      ++++         ++|  +||||||....        ...+.++..+++|+.++.++++++.+.-     ..++||++||
T Consensus        77 ~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS  156 (259)
T 1oaa_A           77 RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             HHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcC
Confidence            7764         358  99999997532        1123345889999999999999886531     1468999999


Q ss_pred             cceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-CCcEEEeecCeEeCCC
Q 025660          134 NAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~vrp~~v~g~~  202 (249)
                      ..++.+.+                      +...|+.||.+.+.+.+.++.+. ++++++|.||.+.++.
T Consensus       157 ~~~~~~~~----------------------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~  204 (259)
T 1oaa_A          157 LCALQPYK----------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             GGGTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred             chhcCCCC----------------------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch
Confidence            87643221                      24579999999999999998875 5999999999887764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.88  E-value=5.3e-22  Score=174.41  Aligned_cols=167  Identities=16%  Similarity=0.117  Sum_probs=128.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++++|||||+|+||++++++|+++|++|++++|+.      ..+....+ .+.     +..++.+|++|.++++++++ 
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~------~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~  280 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG------AAEDLKRVADKV-----GGTALTLDVTADDAVDKITAH  280 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG------GHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHH
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc------cHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHH
Confidence            457999999999999999999999999999999875      11222222 222     35689999999999888875 


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc----CCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             .+|+||||||....     ...+.++..+.+|+.++.++.+++.+.    + .++||++||..++.+..+   
T Consensus       281 ~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~~g---  356 (454)
T 3u0b_A          281 VTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRG---  356 (454)
T ss_dssp             HHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCCTT---
T ss_pred             HHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCCCC---
Confidence                   38999999998654     122334588999999999999998765    4 679999999887554422   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         ...|+.||...+.+.+.++.+   +|+++++|.||.+.+++..
T Consensus       357 -------------------~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  399 (454)
T 3u0b_A          357 -------------------QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTE  399 (454)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----
T ss_pred             -------------------CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhh
Confidence                               457999999888777777654   4899999999999998653

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.87  E-value=1.8e-21  Score=173.15  Aligned_cols=167  Identities=21%  Similarity=0.222  Sum_probs=130.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++++|||||+|+||.+++++|.++|+ .|++++|+..     ...... ...++...+.++.++.+|++|.+++.++++
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~-----~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~  332 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGP-----EAPGAAELAEELRGHGCEVVHAACDVAERDALAALVT  332 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGG-----GSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCc-----ccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHh
Confidence            357899999999999999999999999 5888899751     001111 122223334578899999999999999997


Q ss_pred             C--CCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCCCCCC
Q 025660           82 G--CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (249)
Q Consensus        82 ~--~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (249)
                      .  +|+|||+||.....     ..+..+..+.+|+.|+.+|.+++.+. + .++||++||..++++..+           
T Consensus       333 ~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~~g-----------  400 (511)
T 2z5l_A          333 AYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGNAG-----------  400 (511)
T ss_dssp             HSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCCTT-----------
T ss_pred             cCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCCCC-----------
Confidence            5  99999999976541     12233478899999999999998876 5 789999999876544322           


Q ss_pred             chhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEe
Q 025660          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVV  199 (249)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~  199 (249)
                                 ...|+.+|...+.+.+.+.. .|+++++|+||.+.
T Consensus       401 -----------~~~YaaaKa~ld~la~~~~~-~gi~v~sv~pG~~~  434 (511)
T 2z5l_A          401 -----------QGAYAAANAALDALAERRRA-AGLPATSVAWGLWG  434 (511)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHT-TTCCCEEEEECCBC
T ss_pred             -----------CHHHHHHHHHHHHHHHHHHH-cCCcEEEEECCccc
Confidence                       35799999999999987654 69999999999883

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.87  E-value=6.9e-22  Score=175.14  Aligned_cols=170  Identities=21%  Similarity=0.209  Sum_probs=130.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCe-EEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++++|||||+|+||++++++|+++|++ |++++|+..     ..+..+.+ .++...+.++.++.+|++|++++.++++
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~-----~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~  299 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGP-----DADGAGELVAELEALGARTTVAACDVTDRESVRELLG  299 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGG-----GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCC-----CcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHH
Confidence            4578999999999999999999999995 899999861     00111111 1222234578899999999999999998


Q ss_pred             CC------CEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCC
Q 025660           82 GC------TGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 ~~------d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                      .+      |.|||+||.....     ..+..+..+.+|+.|+.+|.+++.+.+ .++||++||..++.+..+        
T Consensus       300 ~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~~g--------  370 (486)
T 2fr1_A          300 GIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG--------  370 (486)
T ss_dssp             TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT--------
T ss_pred             HHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCCCC--------
Confidence            64      9999999976531     122334788999999999999998877 889999999876544322        


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                                    ...|+.+|...+.+...+.. .|+++++|+||.+.+++
T Consensus       371 --------------~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~g  407 (486)
T 2fr1_A          371 --------------LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSG  407 (486)
T ss_dssp             --------------CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC---
T ss_pred             --------------CHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCc
Confidence                          34699999999998887665 69999999999998864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.87  E-value=8.6e-21  Score=158.15  Aligned_cols=215  Identities=13%  Similarity=0.033  Sum_probs=134.2

Q ss_pred             CCCCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCc---ccCCchhhhhhccCCCCC--CCeEEEEcC-----
Q 025660            2 EEGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDP---EHRNSKDLSFLKNLPGAS--ERLRIFHAD-----   69 (249)
Q Consensus         2 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~l~~~~~~~--~~~~~~~~D-----   69 (249)
                      ..++|++|||||+  |+||++++++|+++|++|++++|++...   .....++.+.+.++....  .....+.+|     
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence            3456899999999  9999999999999999999998642000   000001122222221110  012333333     


Q ss_pred             ---CCC------------hhhHHHHHc-------CCCEEEEccccCC----C---CCCChHHHhhhhHHhHHHHHHHHHH
Q 025660           70 ---LSH------------PDGFDAAIA-------GCTGVLHVATPVD----F---EDKEPEEVITQRAINGTLGILKSCL  120 (249)
Q Consensus        70 ---l~~------------~~~~~~~~~-------~~d~vih~a~~~~----~---~~~~~~~~~~~~n~~~t~~l~~~~~  120 (249)
                         +++            ++++.++++       ++|++|||||...    .   ...+.++..+++|+.++.++++++.
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  164 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence               322            445555544       6899999998642    1   1122334889999999999999998


Q ss_pred             hcC-CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeec
Q 025660          121 KSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIP  195 (249)
Q Consensus       121 ~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp  195 (249)
                      +.- ..++||++||..++.+.+.                     ....|+.||.+.+.+.+.++.+    +|+++++|+|
T Consensus       165 ~~m~~~g~iv~isS~~~~~~~~~---------------------~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~P  223 (297)
T 1d7o_A          165 PIMNPGGASISLTYIASERIIPG---------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA  223 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCCTT---------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHhccCceEEEEeccccccCCCC---------------------cchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEec
Confidence            751 1369999999875432211                     1136999999999888877654    5899999999


Q ss_pred             CeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          196 SMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       196 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      |.|.+|.....  .....+.......        .....+...+|+|.+++|
T Consensus       224 G~v~T~~~~~~--~~~~~~~~~~~~~--------~p~~r~~~pedvA~~v~~  265 (297)
T 1d7o_A          224 GPLGSRAAKAI--GFIDTMIEYSYNN--------APIQKTLTADEVGNAAAF  265 (297)
T ss_dssp             CCCBCCCSSCC--SHHHHHHHHHHHH--------SSSCCCBCHHHHHHHHHH
T ss_pred             cccccchhhhc--cccHHHHHHhhcc--------CCCCCCCCHHHHHHHHHH
Confidence            99999975431  1111111111111        112345677888887765

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.86  E-value=2.7e-21  Score=171.06  Aligned_cols=171  Identities=21%  Similarity=0.199  Sum_probs=134.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++++|||||+|+||.+++++|+++|+ .|++++|+..     ..+..+ ...++...+.++.++.+|++|.+++.++++.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~-----~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGA-----DAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGG-----GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCC-----ChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            47899999999999999999999998 7888888641     111111 1222233345789999999999999999873


Q ss_pred             ------CCEEEEccccC-CC-----CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCC
Q 025660           83 ------CTGVLHVATPV-DF-----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        83 ------~d~vih~a~~~-~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                            +|+|||+||.. ..     ...+.++..+.+|+.|+.+|.+.+.+.+ .++||++||..++.+..+        
T Consensus       314 i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~g--------  384 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSGG--------  384 (496)
T ss_dssp             CCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCTT--------
T ss_pred             HHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCCC--------
Confidence                  79999999986 32     1122335889999999999999999887 789999999887654422        


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCC
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~  204 (249)
                                    ...|+.+|...+.+.+++.. .|+++++|.||.+.+++..
T Consensus       385 --------------~~~YaAaKa~ldala~~~~~-~Gi~v~sV~pG~w~~~gm~  423 (496)
T 3mje_A          385 --------------QPGYAAANAYLDALAEHRRS-LGLTASSVAWGTWGEVGMA  423 (496)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHH-TTCCCEEEEECEESSSCC-
T ss_pred             --------------cHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCcccCCccc
Confidence                          45799999999999887665 7999999999999877643

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.86  E-value=1.3e-21  Score=158.65  Aligned_cols=163  Identities=12%  Similarity=0.100  Sum_probs=117.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEE-E--cCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHH-HH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-V--RSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA-AI   80 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~-~~   80 (249)
                      +|++|||||+|+||++++++|+++|++|+++ +  |+.        ++.+.+.+.. .  ...+.  |..+.+.+.+ +.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~--------~~~~~~~~~~-~--~~~~~--~~~~v~~~~~~~~   67 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADA--------AERQRFESEN-P--GTIAL--AEQKPERLVDATL   67 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH--------HHHHHHHHHS-T--TEEEC--CCCCGGGHHHHHG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCH--------HHHHHHHHHh-C--CCccc--CHHHHHHHHHHHH
Confidence            3689999999999999999999999999999 6  876        4444332211 1  12222  5544443332 32


Q ss_pred             c---CCCEEEEccccCCC---C-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           81 A---GCTGVLHVATPVDF---E-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        81 ~---~~d~vih~a~~~~~---~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                      +   ++|+||||||....   .     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.+    
T Consensus        68 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----  142 (244)
T 1zmo_A           68 QHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLA----  142 (244)
T ss_dssp             GGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT----
T ss_pred             HHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCC----
Confidence            2   58999999997532   1     112335789999999999888775    344 58999999987643321    


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                        +...|+.||.+.+.+.+.++.+   +++++++|+||.+.++..
T Consensus       143 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          143 ------------------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             ------------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence                              1356999999999999888776   389999999999988764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.85  E-value=6.3e-21  Score=160.55  Aligned_cols=173  Identities=14%  Similarity=0.112  Sum_probs=122.4

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCc-ccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDP-EHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|..... ..+..++.+.+ .++...+.   ...+|+++.+++.+++
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~---~~~~D~~~~~~~~~~~   83 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGEKLV   83 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC---eEEEeCCCHHHHHHHH
Confidence            3468999999999999999999999999999986642100 00111222221 12211111   2358999998776665


Q ss_pred             c-------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|+||||||.....     ..+.++..+++|+.|+.++++++.    +.+ .++||++||..+.++..   
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~---  159 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF---  159 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCC---
Confidence            4       589999999975431     223345889999999888888764    445 58999999976544321   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                         +...|+.||.+.+.+.+.++.+   +|+++++|+||.+ ++.
T Consensus       160 -------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~  200 (319)
T 1gz6_A          160 -------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRM  200 (319)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STT
T ss_pred             -------------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccc
Confidence                               1357999999999999988776   4899999999987 543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.84  E-value=2.1e-21  Score=164.06  Aligned_cols=180  Identities=17%  Similarity=0.066  Sum_probs=127.0

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcCCCCcccCCchhhhh-hccCCCCCCCeEEEEcCCCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSH   72 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~   72 (249)
                      |+ +.++|+||||+||||++++..|+++|+       +|+++++.+.      .++... ..++...  .+.++ +|+++
T Consensus         1 m~-~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~------~~~~~g~~~dl~~~--~~~~~-~di~~   70 (327)
T 1y7t_A            1 MK-APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA------MKALEGVVMELEDC--AFPLL-AGLEA   70 (327)
T ss_dssp             CC-CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG------HHHHHHHHHHHHTT--TCTTE-EEEEE
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc------hhhccchhhhhhcc--ccccc-CCeEe
Confidence            44 446899999999999999999999986       8999988640      011111 1111110  11222 57777


Q ss_pred             hhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCCC
Q 025660           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (249)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (249)
                      .+++.++++++|+|||+||.......++. .+++.|+.+++++++++++.+ ...+++++|+.......     ...|..
T Consensus        71 ~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~-~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~-----~~~~~~  144 (327)
T 1y7t_A           71 TDDPKVAFKDADYALLVGAAPRKAGMERR-DLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL-----IAYKNA  144 (327)
T ss_dssp             ESCHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH-----HHHHTC
T ss_pred             ccChHHHhCCCCEEEECCCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH-----HHHHHc
Confidence            77788889999999999998654333444 889999999999999999874 34578887764310000     011111


Q ss_pred             CCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCC
Q 025660          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~  204 (249)
                      +        ..+|.+.|+.||..+|++...+++.+|++.+++||++||||...
T Consensus       145 ~--------~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          145 P--------GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             T--------TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             C--------CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            0        01245679999999999999998888999999999999998754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.81  E-value=4.5e-20  Score=164.80  Aligned_cols=176  Identities=19%  Similarity=0.208  Sum_probs=128.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCe-EEEE-EcCCCCccc-----CCchhh-hhhccCCCCCCCeEEEEcCCCChhh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTT-VRSELDPEH-----RNSKDL-SFLKNLPGASERLRIFHADLSHPDG   75 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~~~~-----~~~~~~-~~l~~~~~~~~~~~~~~~Dl~~~~~   75 (249)
                      .++++|||||+|+||.+++++|+++|++ |+++ +|+..+...     ...+.. +...++...+.++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4578999999999999999999999997 5555 777411000     000111 1122222234578999999999999


Q ss_pred             HHHHHcC------CCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcCC----cceEEEEcccceeecc
Q 025660           76 FDAAIAG------CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSGT----VKRVVYTSSNAAVFYN  140 (249)
Q Consensus        76 ~~~~~~~------~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~----~~~~v~~SS~~~~~~~  140 (249)
                      +.++++.      +|+||||||....     ...+.++..+.+|+.|+.+|.+.+.+...    .++||++||..++.+.
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~  409 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG  409 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence            9999874      6999999998654     11223358899999999999999976531    4799999998876544


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                      .+                      ...|+.+|...+.+..++.. .|+++++|.||.+-+++
T Consensus       410 ~g----------------------~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~~tgm  448 (525)
T 3qp9_A          410 AG----------------------QGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPWEGSR  448 (525)
T ss_dssp             TT----------------------CHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCBTTSG
T ss_pred             CC----------------------CHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCcccccc
Confidence            32                      45799999999988776544 58999999999995443

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.80  E-value=3.6e-19  Score=149.80  Aligned_cols=179  Identities=11%  Similarity=-0.029  Sum_probs=102.3

Q ss_pred             CCCeEEEecc--chhhHHHHHHHHHHCCCeEEEEEcCCCC---cccCCchhhhh------------hccCCCCCC---Ce
Q 025660            4 GKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELD---PEHRNSKDLSF------------LKNLPGASE---RL   63 (249)
Q Consensus         4 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~------------l~~~~~~~~---~~   63 (249)
                      ++|++|||||  +|+||++++++|+++|++|++++|++..   ......++.+.            .+++...+.   ..
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD   87 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence            4578999999  8999999999999999999999864100   00000011110            011111110   12


Q ss_pred             EEEEcCC------------CC--------hhhHHHHHc-------CCCEEEEccccCC--C-----CCCChHHHhhhhHH
Q 025660           64 RIFHADL------------SH--------PDGFDAAIA-------GCTGVLHVATPVD--F-----EDKEPEEVITQRAI  109 (249)
Q Consensus        64 ~~~~~Dl------------~~--------~~~~~~~~~-------~~d~vih~a~~~~--~-----~~~~~~~~~~~~n~  109 (249)
                      ..+.+|+            ++        ++++.++++       ++|++|||||...  .     ...+.++..+++|+
T Consensus        88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  167 (319)
T 2ptg_A           88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS  167 (319)
T ss_dssp             EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred             ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence            4444442            22        335555544       6899999999642  1     12233458899999


Q ss_pred             hHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---
Q 025660          110 NGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---  185 (249)
Q Consensus       110 ~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---  185 (249)
                      .++.++++++.+.- ..++||++||..++.+.+.                     ....|+.||.+.+.+.+.++.+   
T Consensus       168 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~---------------------~~~~Y~asKaal~~l~~~la~el~~  226 (319)
T 2ptg_A          168 YSFVSLLQHFLPLMKEGGSALALSYIASEKVIPG---------------------YGGGMSSAKAALESDCRTLAFEAGR  226 (319)
T ss_dssp             HHHHHHHHHHGGGEEEEEEEEEEEECC---------------------------------------THHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeccccccccCc---------------------cchhhHHHHHHHHHHHHHHHHHhcc
Confidence            99999999997651 1269999999876433211                     0136999999888877776554   


Q ss_pred             -cCCcEEEeecCeEeCCCC
Q 025660          186 -HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       186 -~~~~~~~vrp~~v~g~~~  203 (249)
                       +|+++++|+||.|.++..
T Consensus       227 ~~gIrvn~v~PG~v~T~~~  245 (319)
T 2ptg_A          227 ARAVRVNCISAGPLKSRAA  245 (319)
T ss_dssp             HHCCEEEEEEECCCC----
T ss_pred             ccCeeEEEEeeCCccChhh
Confidence             589999999999998864

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.80  E-value=6.1e-19  Score=148.21  Aligned_cols=178  Identities=13%  Similarity=0.023  Sum_probs=117.6

Q ss_pred             CCCeEEEecc--chhhHHHHHHHHHHCCCeEEEEEcCCCCc---ccCCchhhhhhccCCCCC--CCeEEEEcCC------
Q 025660            4 GKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDP---EHRNSKDLSFLKNLPGAS--ERLRIFHADL------   70 (249)
Q Consensus         4 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~l~~~~~~~--~~~~~~~~Dl------   70 (249)
                      ++|++|||||  +|+||++++++|+++|++|++++|++...   ......+.+.+.++....  .....+.+|+      
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   87 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE   87 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence            4578999999  89999999999999999999998742000   000001112222221110  0123444443      


Q ss_pred             ------C--------ChhhHHHHHc-------CCCEEEEccccCC--C-----CCCChHHHhhhhHHhHHHHHHHHHHhc
Q 025660           71 ------S--------HPDGFDAAIA-------GCTGVLHVATPVD--F-----EDKEPEEVITQRAINGTLGILKSCLKS  122 (249)
Q Consensus        71 ------~--------~~~~~~~~~~-------~~d~vih~a~~~~--~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~  122 (249)
                            +        |++++.++++       ++|++|||||...  .     ...+.++..+++|+.++.++++++.+.
T Consensus        88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  167 (315)
T 2o2s_A           88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI  167 (315)
T ss_dssp             SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred             hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence                  2        2445555554       6899999999642  1     112333588999999999999998764


Q ss_pred             C-CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEeecCe
Q 025660          123 G-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSM  197 (249)
Q Consensus       123 ~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~  197 (249)
                      - ..++||++||..++.+.+.                     ....|+.||...+.+.+.++.+    +|+++++|+||.
T Consensus       168 m~~~g~Iv~isS~~~~~~~~~---------------------~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~  226 (315)
T 2o2s_A          168 MNEGGSAVTLSYLAAERVVPG---------------------YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGP  226 (315)
T ss_dssp             EEEEEEEEEEEEGGGTSCCTT---------------------CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECC
T ss_pred             HhcCCEEEEEecccccccCCC---------------------ccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccc
Confidence            1 1369999999875432211                     1136999999888888876654    589999999999


Q ss_pred             EeCCC
Q 025660          198 VVGPF  202 (249)
Q Consensus       198 v~g~~  202 (249)
                      |.++.
T Consensus       227 v~T~~  231 (315)
T 2o2s_A          227 LKSRA  231 (315)
T ss_dssp             CCCHH
T ss_pred             ccchh
Confidence            98864

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.79  E-value=4e-19  Score=161.67  Aligned_cols=170  Identities=14%  Similarity=0.116  Sum_probs=116.5

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCccc-CCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH-RNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .++|++|||||+|+||++++++|+++|++|++++|....... +..+..+.+ .++...+..   ..+|+++.+++.+++
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE---AVADYNSVIDGAKVI   93 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC---EEECCCCGGGHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe---EEEEeCCHHHHHHHH
Confidence            356899999999999999999999999999999883210000 001222221 222111122   348999999888887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       .+|++|||||....     ...+.++..+++|+.|+.++++++.    +.+ .++||++||..++.+...  
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~~~--  170 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNFG--  170 (613)
T ss_dssp             C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCCTT--
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCC--
Confidence            6       47999999998643     1223345889999999999888774    444 579999999876544322  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeE
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMV  198 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v  198 (249)
                                          ...|+.||.+.+.+.+.++.+.   |+++++|.||.+
T Consensus       171 --------------------~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          171 --------------------QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             --------------------ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence                                4579999999999888887764   899999999975

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.79  E-value=1.9e-18  Score=146.07  Aligned_cols=177  Identities=8%  Similarity=-0.032  Sum_probs=122.7

Q ss_pred             CCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCC-cccCCchhhhhh---ccC-CCCCCCeEEEEcCCCCh--h-
Q 025660            5 KGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELD-PEHRNSKDLSFL---KNL-PGASERLRIFHADLSHP--D-   74 (249)
Q Consensus         5 ~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~l---~~~-~~~~~~~~~~~~Dl~~~--~-   74 (249)
                      +|++|||||++  +||++++++|+++|++|++.+|++.. ...+..++.+..   ... ........++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57899999875  99999999999999999977654300 000000111111   111 11223477889999887  6 


Q ss_pred             -----------------hHHHHHc-------CCCEEEEccccCC--C-----CCCChHHHhhhhHHhHHHHHHHHHHhcC
Q 025660           75 -----------------GFDAAIA-------GCTGVLHVATPVD--F-----EDKEPEEVITQRAINGTLGILKSCLKSG  123 (249)
Q Consensus        75 -----------------~~~~~~~-------~~d~vih~a~~~~--~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~  123 (249)
                                       ++.++++       .+|++|||||...  .     ...+.++..+++|+.++..+.+.+.+.-
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             6666655       5899999999642  1     1223345899999999999999987642


Q ss_pred             -CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCc-hHHHHHHHHHHHHHHHHHH----cCCcEEEeecCe
Q 025660          124 -TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK-SYAISKTLTERAALEFAEE----HGLDLVTLIPSM  197 (249)
Q Consensus       124 -~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~----~~~~~~~vrp~~  197 (249)
                       ..++||++||..+..+.+.                      .. .|+.||.+.+.+.+.++.+    +++++++|.||.
T Consensus       162 ~~~g~Iv~isS~~~~~~~~~----------------------~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~  219 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKVVPG----------------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP  219 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTT----------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred             hhCCeEEEEeCccccCCCCc----------------------chHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecce
Confidence             1269999999876433211                      22 6999999888777766554    489999999999


Q ss_pred             EeCCCC
Q 025660          198 VVGPFI  203 (249)
Q Consensus       198 v~g~~~  203 (249)
                      |.++..
T Consensus       220 v~T~~~  225 (329)
T 3lt0_A          220 LKSRAA  225 (329)
T ss_dssp             CCCHHH
T ss_pred             eechhH
Confidence            988764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.77  E-value=9.5e-18  Score=143.04  Aligned_cols=178  Identities=13%  Similarity=0.042  Sum_probs=122.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHH-CCCeEEEEEcCCCCcccCC-------chhhhhhccCCCCCCCeEEEEcCCCChhh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRN-------SKDLSFLKNLPGASERLRIFHADLSHPDG   75 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~   75 (249)
                      .+|++|||||+++||.++++.|++ .|++|++++|+........       .+....  .....+..+..+.+|++++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~--~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHK--FAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHH--HHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHH--HHHhcCCceEEEECCCCCHHH
Confidence            468899999999999999999999 9999999998762100000       000111  111123467889999999998


Q ss_pred             HHHHHc-------CCCEEEEccccCC-------------C--------------------------CCCChHHHhhhhHH
Q 025660           76 FDAAIA-------GCTGVLHVATPVD-------------F--------------------------EDKEPEEVITQRAI  109 (249)
Q Consensus        76 ~~~~~~-------~~d~vih~a~~~~-------------~--------------------------~~~~~~~~~~~~n~  109 (249)
                      +.++++       ++|++|||||...             .                          ...+.++..+++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            888876       4799999998730             0                          11123347788888


Q ss_pred             hHHH-HHHHHHHhcC---CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH
Q 025660          110 NGTL-GILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE  185 (249)
Q Consensus       110 ~~t~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  185 (249)
                      .+.. .+++.+....   .-+++|++||.....+.+..                    ....|+.||...+.+.+.++.+
T Consensus       204 ~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~--------------------~~~aY~AaKaal~~ltrsLA~E  263 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY--------------------WNGSIGAAKKDLDQKVLAIRES  263 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT--------------------TTSHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc--------------------cchHHHHHHHHHHHHHHHHHHH
Confidence            7765 5555543221   13689999997754322110                    1257999999888877776665


Q ss_pred             ---c-CCcEEEeecCeEeCCCC
Q 025660          186 ---H-GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       186 ---~-~~~~~~vrp~~v~g~~~  203 (249)
                         + |+++++|.||.+-++..
T Consensus       264 la~~~GIRVNaVaPG~i~T~~s  285 (405)
T 3zu3_A          264 LAAHGGGDARVSVLKAVVSQAS  285 (405)
T ss_dssp             HHTTTSCEEEEEECCCCCCHHH
T ss_pred             hCcccCeEEEEEEeCCCcCchh
Confidence               4 89999999999988864

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.75  E-value=5.9e-18  Score=145.49  Aligned_cols=181  Identities=13%  Similarity=0.011  Sum_probs=121.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHH-CCCeEEEEEcCCCCcccCC-chh---hhhh-ccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRN-SKD---LSFL-KNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~-~~~---~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      .+|++|||||+++||+++++.|.+ .|++|++++|+........ ..-   ...+ +.....+..+..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            468899999999999999999999 9999999999862110000 000   0001 111122346788999999998877


Q ss_pred             HHHc--------CCCEEEEccccC-------------CC--------------------------CCCChHHHhhhhHHh
Q 025660           78 AAIA--------GCTGVLHVATPV-------------DF--------------------------EDKEPEEVITQRAIN  110 (249)
Q Consensus        78 ~~~~--------~~d~vih~a~~~-------------~~--------------------------~~~~~~~~~~~~n~~  110 (249)
                      ++++        ++|++|||||..             ..                          ...+.++..+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            7764        479999999862             00                          011222356667766


Q ss_pred             HHH-HHHHHHHhcC---CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-
Q 025660          111 GTL-GILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-  185 (249)
Q Consensus       111 ~t~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-  185 (249)
                      ++. .+++.+....   ..+++|++||..+..+.+.                    .....|+.||...+.+.+.++.+ 
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~--------------------~~~~aY~ASKaAl~~lTrsLA~El  279 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI--------------------YWHGALGKAKVDLDRTAQRLNARL  279 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH--------------------HTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC--------------------ccchHHHHHHHHHHHHHHHHHHHh
Confidence            654 5566554321   1368999999765322211                    01247999999888888877665 


Q ss_pred             --cCCcEEEeecCeEeCCCCC
Q 025660          186 --HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       186 --~~~~~~~vrp~~v~g~~~~  204 (249)
                        +|+++++|.||.|-++...
T Consensus       280 a~~GIRVNaVaPG~i~T~~~~  300 (422)
T 3s8m_A          280 AKHGGGANVAVLKSVVTQASA  300 (422)
T ss_dssp             HTTTCEEEEEEECCCCCTTGG
T ss_pred             CccCEEEEEEEcCCCcChhhh
Confidence              4899999999999998754

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.75  E-value=8.3e-18  Score=156.84  Aligned_cols=168  Identities=20%  Similarity=0.236  Sum_probs=131.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHH-HCCC-eEEEEEcCCCCcccCCchhh-hhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLL-DHGY-SVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .++++|||||+|+||++++++|+ ++|+ .|++++|+..     ..+.. +.++++...+.++.++.+|++|.+++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~-----~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~  603 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGP-----AASGAAELVAQLTAYGAEVSLQACDVADRETLAKVL  603 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGG-----GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCcc-----chHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHH
Confidence            45789999999999999999999 7898 5899999841     11222 222333334567899999999999999998


Q ss_pred             cC------CCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCC
Q 025660           81 AG------CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        81 ~~------~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                      +.      +|+||||||....     ...+.++..+++|+.|+.+|.+++.. . . +||++||..++.+.++       
T Consensus       604 ~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~-l-~iV~~SS~ag~~g~~g-------  673 (795)
T 3slk_A          604 ASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-D-V-ALVLFSSVSGVLGSGG-------  673 (795)
T ss_dssp             HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-T-S-EEEEEEETHHHHTCSS-------
T ss_pred             HHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-C-C-EEEEEccHHhcCCCCC-------
Confidence            73      6999999998654     12233458899999999999999833 3 4 9999999987655433       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                                     ...|+.+|...+.+.+++.. .|++++.|.||.+-+++
T Consensus       674 ---------------~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          674 ---------------QGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCC
T ss_pred             ---------------CHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcch
Confidence                           35699999999998888765 69999999999987764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.74  E-value=1.3e-17  Score=151.20  Aligned_cols=166  Identities=14%  Similarity=0.122  Sum_probs=119.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCC-CChhhH-HHHH-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL-SHPDGF-DAAI-   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl-~~~~~~-~~~~-   80 (249)
                      ++|+++||||+++||++++++|+++|++|++.+|+.      .++..+.+...   +.++..+.+|+ .+.+++ +++. 
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~------~~~~~~~i~~~---g~~~~~~~~Dv~~~~~~~~~~~~~  391 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD------ATKTVDEIKAA---GGEAWPDQHDVAKDSEAIIKNVID  391 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC------CHHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHH
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc------HHHHHHHHHhc---CCeEEEEEcChHHHHHHHHHHHHH
Confidence            457899999999999999999999999999988643      11222233222   23566788898 665443 2232 


Q ss_pred             --cCCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccccCC
Q 025660           81 --AGCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        81 --~~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                        .++|++|||||....     ...+.++..+++|+.|+.++.+++.    +.+ .++||++||..+..+...       
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~~-------  463 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFG-------  463 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTT-------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCC-------
Confidence              368999999997543     1223345899999999888777664    334 579999999876543321       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                     ...|+.||.....+.+.++.+   +|+++++|.||. .++.
T Consensus       464 ---------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m  503 (604)
T 2et6_A          464 ---------------QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM  503 (604)
T ss_dssp             ---------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC
T ss_pred             ---------------ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc
Confidence                           346999999888888877665   489999999994 5543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.72  E-value=4.3e-17  Score=160.03  Aligned_cols=168  Identities=18%  Similarity=0.145  Sum_probs=123.9

Q ss_pred             CCCCeEEEeccchh-hHHHHHHHHHHCCCeEEEEE-cCCCCcccCCchhhh----hh-ccCCCCCCCeEEEEcCCCChhh
Q 025660            3 EGKGRVCVTGGTGF-IASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLS----FL-KNLPGASERLRIFHADLSHPDG   75 (249)
Q Consensus         3 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~----~l-~~~~~~~~~~~~~~~Dl~~~~~   75 (249)
                      .+++++|||||+|+ ||.+++++|+++|++|++++ |+.        ++..    .+ .+....+.++.++.+|++|.++
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~--------~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~s  744 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFS--------KQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQD  744 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCC--------HHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCH--------HHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHH
Confidence            35689999999998 99999999999999999985 544        3322    22 1222234578899999999998


Q ss_pred             HHHHHc-------------CCCEEEEccccCCCC------C--CChHHHhhhhHHhHHHHHHHHHHhcC-----CcceEE
Q 025660           76 FDAAIA-------------GCTGVLHVATPVDFE------D--KEPEEVITQRAINGTLGILKSCLKSG-----TVKRVV  129 (249)
Q Consensus        76 ~~~~~~-------------~~d~vih~a~~~~~~------~--~~~~~~~~~~n~~~t~~l~~~~~~~~-----~~~~~v  129 (249)
                      +.++++             .+|+||||||.....      .  .+.++..+.+|+.++..+++.++...     ..++||
T Consensus       745 V~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IV  824 (1887)
T 2uv8_A          745 VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVIL  824 (1887)
T ss_dssp             HHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEE
T ss_pred             HHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEE
Confidence            888764             489999999975331      1  12335889999999999999874322     136999


Q ss_pred             EEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHH-HHHHHHHcC--CcEEEeecCeEe-CCC
Q 025660          130 YTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA-ALEFAEEHG--LDLVTLIPSMVV-GPF  202 (249)
Q Consensus       130 ~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~--~~~~~vrp~~v~-g~~  202 (249)
                      ++||..+..+.                        ...|+.||...+.+ .+.++.+.+  +++++|.||++. ++.
T Consensus       825 nISS~ag~~gg------------------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m  877 (1887)
T 2uv8_A          825 PMSPNHGTFGG------------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGL  877 (1887)
T ss_dssp             EECSCTTCSSC------------------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC--
T ss_pred             EEcChHhccCC------------------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccc
Confidence            99998754321                        23699999999988 555555433  999999999999 454

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.72  E-value=6.6e-17  Score=146.66  Aligned_cols=167  Identities=19%  Similarity=0.167  Sum_probs=111.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcc-cCCchhhhh-hccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE-HRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~-l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+++||||+++||++++++|+++|++|++.+|+..... .+..+..+. .+++...+.+.   .+|+.|.++.+++++
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDKIVE   83 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHHHHH
Confidence            4678999999999999999999999999999887531000 000012221 12221112222   246666544443332


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|++|||||....     ...+.++..+++|+.|+.++.+++.    +.+ .++||++||..+..+.+.   
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~~---  159 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFG---  159 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCC---
Confidence                   68999999997543     1223345899999999888777654    444 579999999876544322   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPS  196 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~  196 (249)
                                         ...|+.||.....+.+.++.+   +|+++++|.|+
T Consensus       160 -------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          160 -------------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             -------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence                               346999999888888877766   48999999997

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.71  E-value=1.4e-16  Score=137.83  Aligned_cols=178  Identities=11%  Similarity=-0.052  Sum_probs=119.8

Q ss_pred             CCCeEEEeccchhhHHH--HHHHHHHCCCeEEEEEcCCCCcccCC-------chhhhhhccCCCCCCCeEEEEcCCCChh
Q 025660            4 GKGRVCVTGGTGFIASW--LIMRLLDHGYSVTTTVRSELDPEHRN-------SKDLSFLKNLPGASERLRIFHADLSHPD   74 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~Dl~~~~   74 (249)
                      .+|++|||||+++||.+  +++.|.++|++|++++|+......+.       .+....+.  ...+..+..+.+|+++++
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFA--KKKGLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHH--HHTTCCEEEEESCTTCHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHH--HHcCCcEEEEEeeCCCHH
Confidence            46889999999999999  99999999999999999762111100       01111111  112346889999999999


Q ss_pred             hHHHHHc-------CCCEEEEccccC-------------CC--------------------------CCCChHHHhhhhH
Q 025660           75 GFDAAIA-------GCTGVLHVATPV-------------DF--------------------------EDKEPEEVITQRA  108 (249)
Q Consensus        75 ~~~~~~~-------~~d~vih~a~~~-------------~~--------------------------~~~~~~~~~~~~n  108 (249)
                      +++++++       .+|++|||||..             ..                          ...+.++..+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            8888775       479999999874             00                          0112223556666


Q ss_pred             HhHHH-HHHHHHHhcC---CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHH
Q 025660          109 INGTL-GILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE  184 (249)
Q Consensus       109 ~~~t~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  184 (249)
                      ..+.. .+++.+....   ...++|++||.....+.+.                    .....|+.||.+.+.+.+.++.
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~--------------------~~~~aY~ASKaAL~~ltrsLA~  276 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKI--------------------YREGTIGIAKKDLEDKAKLINE  276 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTT--------------------TTTSHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCc--------------------cccHHHHHHHHHHHHHHHHHHH
Confidence            66554 5555544321   1368999999764322211                    0125799999988877776655


Q ss_pred             H----cCCcEEEeecCeEeCCCC
Q 025660          185 E----HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       185 ~----~~~~~~~vrp~~v~g~~~  203 (249)
                      +    +|+++++|.||.|-++..
T Consensus       277 ELa~~~GIrVN~V~PG~v~T~~s  299 (418)
T 4eue_A          277 KLNRVIGGRAFVSVNKALVTKAS  299 (418)
T ss_dssp             HHHHHHSCEEEEEECCCCCCHHH
T ss_pred             HhCCccCeEEEEEECCcCcChhh
Confidence            4    589999999999998754

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.71  E-value=1.1e-17  Score=159.96  Aligned_cols=170  Identities=18%  Similarity=0.131  Sum_probs=121.5

Q ss_pred             CCCCeEEEeccchh-hHHHHHHHHHHCCCeEEEEE-cCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            3 EGKGRVCVTGGTGF-IASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         3 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      .+++++|||||+|+ ||++++++|+++|++|++++ |+..    ...+..+.+ .+....+.++.++.+|++|.+++.++
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e----~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSK----QVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCST----TTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHH----HHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            35678999999998 99999999999999999984 5441    001111222 12222345788999999999988887


Q ss_pred             Hc-------------CCCEEEEccccCCCC------C--CChHHHhhhhHHhHHHHHHHHHHhc-----CCcceEEEEcc
Q 025660           80 IA-------------GCTGVLHVATPVDFE------D--KEPEEVITQRAINGTLGILKSCLKS-----GTVKRVVYTSS  133 (249)
Q Consensus        80 ~~-------------~~d~vih~a~~~~~~------~--~~~~~~~~~~n~~~t~~l~~~~~~~-----~~~~~~v~~SS  133 (249)
                      ++             .+|+||||||.....      .  .+.++..+.+|+.++..+++.++..     +..++||++||
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISS  629 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  629 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCS
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEC
Confidence            64             489999999975321      1  1233588999999999999887321     11368999999


Q ss_pred             cceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHH-HHHHHHHc--CCcEEEeecCeEeC
Q 025660          134 NAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA-ALEFAEEH--GLDLVTLIPSMVVG  200 (249)
Q Consensus       134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~--~~~~~~vrp~~v~g  200 (249)
                      ..+..+  .                      ...|+.||.+.+.+ .+.++.+.  .++++.|.||.+.|
T Consensus       630 iAG~~G--g----------------------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T  675 (1688)
T 2pff_A          630 NHGTFG--G----------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  675 (1688)
T ss_dssp             CTTTSS--C----------------------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred             hHhccC--C----------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence            765432  1                      24699999999988 44343322  29999999999984

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.71  E-value=7e-17  Score=158.27  Aligned_cols=169  Identities=17%  Similarity=0.096  Sum_probs=123.8

Q ss_pred             CCCCeEEEeccchh-hHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhh----hhh-ccCCCCCCCeEEEEcCCCChhhH
Q 025660            3 EGKGRVCVTGGTGF-IASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL----SFL-KNLPGASERLRIFHADLSHPDGF   76 (249)
Q Consensus         3 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~l-~~~~~~~~~~~~~~~Dl~~~~~~   76 (249)
                      .+++++|||||+|+ ||.+++++|+++|++|++++++..       +..    +.+ .++...+.++.++.+|++|.+++
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~-------~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV  722 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFS-------RQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDV  722 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCC-------HHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCh-------HHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHH
Confidence            45689999999999 999999999999999999864431       222    122 22223345788999999999998


Q ss_pred             HHHHc-----------CCCEEEEccccCCCC-----CC---ChHHHhhhhHHhHHHHHHHHHHhc-----CCcceEEEEc
Q 025660           77 DAAIA-----------GCTGVLHVATPVDFE-----DK---EPEEVITQRAINGTLGILKSCLKS-----GTVKRVVYTS  132 (249)
Q Consensus        77 ~~~~~-----------~~d~vih~a~~~~~~-----~~---~~~~~~~~~n~~~t~~l~~~~~~~-----~~~~~~v~~S  132 (249)
                      .++++           .+|+||||||.....     .+   +.++..+.+|+.++.++++.++..     ...++||++|
T Consensus       723 ~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnIS  802 (1878)
T 2uv9_A          723 EALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLS  802 (1878)
T ss_dssp             HHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEEC
T ss_pred             HHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEc
Confidence            88864           489999999975331     11   234589999999999888764321     1136999999


Q ss_pred             ccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-c--CCcEEEeecCeEe-CCC
Q 025660          133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-H--GLDLVTLIPSMVV-GPF  202 (249)
Q Consensus       133 S~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~~vrp~~v~-g~~  202 (249)
                      |..+..+.                        ...|+.||...+.+...+..+ .  .++++.|.||++. +++
T Consensus       803 S~ag~~gg------------------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m  852 (1878)
T 2uv9_A          803 PNHGTFGN------------------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGL  852 (1878)
T ss_dssp             SCSSSSSC------------------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTS
T ss_pred             chhhccCC------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcc
Confidence            98764331                        235999999999887655432 1  3999999999998 664

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.56  E-value=1.6e-14  Score=147.93  Aligned_cols=170  Identities=17%  Similarity=0.135  Sum_probs=122.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCe-EEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++++|||||+|+||+++++.|+++|++ |++++|+..    +.....+.+.++...+.++.++.+|++|.++++++++ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~----~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~ 1958 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGI----RTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITE 1958 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCC----CSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCc----chHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHH
Confidence            3578999999999999999999999997 777888761    0111111222222234568889999999998888775 


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCccccCC
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                           .+|+|||+||....      +.+++ +..+++|+.|+.+|.+.+.+.- ..++||++||..+..+.++       
T Consensus      1959 ~~~~g~id~lVnnAgv~~~~~~~~~t~e~~-~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g------- 2030 (2512)
T 2vz8_A         1959 ATQLGPVGGVFNLAMVLRDAVLENQTPEFF-QDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG------- 2030 (2512)
T ss_dssp             HHHHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT-------
T ss_pred             HHhcCCCcEEEECCCcCCCCchhhCCHHHH-HHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC-------
Confidence                 58999999997533      23344 4889999999999988877641 2479999999876544322       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~  201 (249)
                                     ...|+.+|...+.+.+.... .|++...+..|.+-+.
T Consensus      2031 ---------------~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A         2031 ---------------QANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCTT
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCCc
Confidence                           35699999999999987655 5899999988876544

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.45  E-value=1.9e-12  Score=133.08  Aligned_cols=166  Identities=19%  Similarity=0.177  Sum_probs=116.1

Q ss_pred             CCCeEEEeccchh-hHHHHHHHHHHCCCeEEEEEcCCCCcccCCchh-----hhhh-ccCCCCCCCeEEEEcCCCChhhH
Q 025660            4 GKGRVCVTGGTGF-IASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-----LSFL-KNLPGASERLRIFHADLSHPDGF   76 (249)
Q Consensus         4 ~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----~~~l-~~~~~~~~~~~~~~~Dl~~~~~~   76 (249)
                      ++|++|||||+++ ||+++++.|+++|++|++++|+.        +.     .+.+ .++...+.++..+.+|+++++++
T Consensus      2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~--------~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v 2206 (3089)
T 3zen_D         2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRL--------DDDRLAFYKQLYRDHARFDATLWVVPANMASYSDI 2206 (3089)
T ss_dssp             CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCC--------SHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHH
T ss_pred             CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCCh--------hhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHH
Confidence            5689999999999 99999999999999999999987        22     2222 23333445678899999999988


Q ss_pred             HHHHc-----------CCCEEEEcccc----CCC-------CCCCh---HHHhhhhHHhHHHHHHHHHHh----cCC--c
Q 025660           77 DAAIA-----------GCTGVLHVATP----VDF-------EDKEP---EEVITQRAINGTLGILKSCLK----SGT--V  125 (249)
Q Consensus        77 ~~~~~-----------~~d~vih~a~~----~~~-------~~~~~---~~~~~~~n~~~t~~l~~~~~~----~~~--~  125 (249)
                      +++++           .+|++|||||.    ...       ..+++   .+..+++|+.++..+++.+.+    .+.  .
T Consensus      2207 ~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~ 2286 (3089)
T 3zen_D         2207 DKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASR 2286 (3089)
T ss_dssp             HHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCce
Confidence            88753           37999999997    111       11222   123478888888888776654    220  1


Q ss_pred             ceEEE-EcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH--c--CCcEEEeecCeEeC
Q 025660          126 KRVVY-TSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE--H--GLDLVTLIPSMVVG  200 (249)
Q Consensus       126 ~~~v~-~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~--~~~~~~vrp~~v~g  200 (249)
                      ..+|. .|+....  . .                     ....|+.||.+.+.+.+.++.+  .  +++++.+.||.|-+
T Consensus      2287 ~~ii~~~ss~~g~--~-g---------------------~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~t 2342 (3089)
T 3zen_D         2287 LHVVLPGSPNRGM--F-G---------------------GDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKG 2342 (3089)
T ss_dssp             EEEEEEECSSTTS--C-S---------------------SCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEEC
T ss_pred             eEEEEECCccccc--C-C---------------------CchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCC
Confidence            12222 2221110  0 0                     0235999999999999988887  2  59999999999984


Q ss_pred             C
Q 025660          201 P  201 (249)
Q Consensus       201 ~  201 (249)
                      .
T Consensus      2343 T 2343 (3089)
T 3zen_D         2343 T 2343 (3089)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.41  E-value=1.8e-12  Score=92.45  Aligned_cols=95  Identities=23%  Similarity=0.262  Sum_probs=76.9

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++++|+|+|+ |++|+++++.|.+.| ++|++++|++        ++.+.+..     .++..+.+|+++.+++.++++
T Consensus         3 ~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~--------~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~   68 (118)
T 3ic5_A            3 AMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDL--------AALAVLNR-----MGVATKQVDAKDEAGLAKALG   68 (118)
T ss_dssp             TTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCH--------HHHHHHHT-----TTCEEEECCTTCHHHHHHHTT
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCH--------HHHHHHHh-----CCCcEEEecCCCHHHHHHHHc
Confidence            45679999999 999999999999999 9999999987        55555542     256789999999999999999


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEE
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV  129 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v  129 (249)
                      ++|+|||+++..                 .+..+++.+.+.+ +++|.
T Consensus        69 ~~d~vi~~~~~~-----------------~~~~~~~~~~~~g-~~~~~   98 (118)
T 3ic5_A           69 GFDAVISAAPFF-----------------LTPIIAKAAKAAG-AHYFD   98 (118)
T ss_dssp             TCSEEEECSCGG-----------------GHHHHHHHHHHTT-CEEEC
T ss_pred             CCCEEEECCCch-----------------hhHHHHHHHHHhC-CCEEE
Confidence            999999999631                 1357788888887 54443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.37  E-value=1.1e-12  Score=110.48  Aligned_cols=173  Identities=16%  Similarity=0.036  Sum_probs=116.3

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcC----CCCcccCCchhhhh----hccCCCCCCCeEE
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRS----ELDPEHRNSKDLSF----LKNLPGASERLRI   65 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~----l~~~~~~~~~~~~   65 (249)
                      |+.+.++|+||||+|++|++++..|+.+|.       +|++++++    .        ++.+.    +.....   ..  
T Consensus         1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~--------~~~~g~~~dl~~~~~---~~--   67 (329)
T 1b8p_A            1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQ--------KALQGVMMEIDDCAF---PL--   67 (329)
T ss_dssp             --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHH--------HHHHHHHHHHHTTTC---TT--
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCcccc--------ccchhhHHHHhhhcc---cc--
Confidence            655567999999999999999999999885       89998887    3        22221    222100   11  


Q ss_pred             EEcCCCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCc
Q 025660           66 FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        66 ~~~Dl~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  144 (249)
                       ..|+...+++.+.++++|+|||+||.......+.. .+...|+.+++.+++.+.+.. +..+||++|.-.......-. 
T Consensus        68 -~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~-dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~-  144 (329)
T 1b8p_A           68 -LAGMTAHADPMTAFKDADVALLVGARPRGPGMERK-DLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAM-  144 (329)
T ss_dssp             -EEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH-
T ss_pred             -cCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHH-
Confidence             23555556778889999999999997544323333 788999999999999999983 45588888863311000000 


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~  201 (249)
                       ...+..|           +...++.++.-..++...+++..|++...++..+|+|.
T Consensus       145 -~~~~~~p-----------~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~  189 (329)
T 1b8p_A          145 -KSAPSLP-----------AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGN  189 (329)
T ss_dssp             -HTCTTSC-----------GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBC
T ss_pred             -HHcCCCC-----------HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEec
Confidence             0000011           12357788777788888888877888888887778884

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.25  E-value=4.2e-11  Score=100.70  Aligned_cols=119  Identities=13%  Similarity=0.018  Sum_probs=84.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++++|+||||+|++|+.++..|+++|  ++|+++++++.      ......+..... ...+..    +.+.+++.++++
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~------~~~~~dL~~~~~-~~~v~~----~~~t~d~~~al~   75 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA------PGVTADISHMDT-GAVVRG----FLGQQQLEAALT   75 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH------HHHHHHHHTSCS-SCEEEE----EESHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc------HhHHHHhhcccc-cceEEE----EeCCCCHHHHcC
Confidence            45689999999999999999999998  89999998761      011111222111 111221    234567888899


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      ++|+|||+|+......... ..+...|+.+++.+++.+.+.+ +..+|+++|.-
T Consensus        76 gaDvVi~~ag~~~~~g~~r-~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNP  127 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPGMTR-DDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNP  127 (326)
T ss_dssp             TCSEEEECCCCCCCSSCCC-SHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSS
T ss_pred             CCCEEEEcCCcCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCc
Confidence            9999999999654322222 2678999999999999999988 67777777754

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.09  E-value=5.4e-11  Score=98.34  Aligned_cols=81  Identities=15%  Similarity=0.100  Sum_probs=64.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      +++++|||||+|++|+++++.|++.|++|++++|+.        ++.+.+.+ +... .++.++.+|+++++++.++++.
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~--------~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~  188 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL--------DKAQAAADSVNKR-FKVNVTAAETADDASRAEAVKG  188 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH--------HHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHHh
Confidence            457999999999999999999999999999999986        44333321 1100 1346678999999999999999


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      +|+|||+++..
T Consensus       189 ~DvlVn~ag~g  199 (287)
T 1lu9_A          189 AHFVFTAGAIG  199 (287)
T ss_dssp             CSEEEECCCTT
T ss_pred             CCEEEECCCcc
Confidence            99999999853

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.07  E-value=1.5e-09  Score=92.05  Aligned_cols=181  Identities=12%  Similarity=-0.009  Sum_probs=109.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHH-HCCCeEEEEEcCCCCcccCCch----hhhhh-ccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLL-DHGYSVTTTVRSELDPEHRNSK----DLSFL-KNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~----~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      .+|++|||||+++||.+.+..|. ..|..|+++.+.......+...    ..... +.....+.....+.+|++++++++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            35899999999999999999988 6799999998876322111100    01111 122233457889999999999888


Q ss_pred             HHHc-------CCCEEEEccccCCCCC----------CCh------------H---------HHhhhhHHhHHHH-----
Q 025660           78 AAIA-------GCTGVLHVATPVDFED----------KEP------------E---------EVITQRAINGTLG-----  114 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~~----------~~~------------~---------~~~~~~n~~~t~~-----  114 (249)
                      ++++       ++|++||++|......          -++            .         +...+..+.+|..     
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s  208 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGE  208 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhh
Confidence            8876       4799999999653200          000            0         0001111222222     


Q ss_pred             ----HHHHHHhcC---CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-
Q 025660          115 ----ILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-  186 (249)
Q Consensus       115 ----l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-  186 (249)
                          ...+....+   ...+++.+|+...   ....+           .|      ....+|.+|...|...++++.+. 
T Consensus       209 ~~s~w~~al~~a~lla~G~siva~SYiGs---e~t~P-----------~Y------~~G~mG~AKaaLEa~~r~La~eL~  268 (401)
T 4ggo_A          209 DWERWIKQLSKEGLLEEGCITLAYSYIGP---EATQA-----------LY------RKGTIGKAKEHLEATAHRLNKENP  268 (401)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEEEECCCC---GGGHH-----------HH------TTSHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHhhhcccCCceEEEEeccCc---ceeec-----------CC------CccHHHHHHHHHHHHHHHHHHhcC
Confidence                122222221   1357888886432   10100           00      01258999999999999998875 


Q ss_pred             CCcEEEeecCeEeCCCCC
Q 025660          187 GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       187 ~~~~~~vrp~~v~g~~~~  204 (249)
                      ++++.++-++.+-+.-..
T Consensus       269 ~~~a~v~v~~a~vT~Ass  286 (401)
T 4ggo_A          269 SIRAFVSVNKGLVTRASA  286 (401)
T ss_dssp             TEEEEEEECCCCCCTTGG
T ss_pred             CCcEEEEEcCccccchhh
Confidence            678888888877766543

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.05  E-value=8.2e-10  Score=92.32  Aligned_cols=168  Identities=11%  Similarity=0.085  Sum_probs=102.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEc--CCCCcccCCchhhhh----hccC-CCCCCCeEEEEcCCCChhhH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVR--SELDPEHRNSKDLSF----LKNL-PGASERLRIFHADLSHPDGF   76 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~----l~~~-~~~~~~~~~~~~Dl~~~~~~   76 (249)
                      ++|+||||+|++|++++..|+.+|.  ++.++++  +.        ++.+.    +... +..+..+.+...+    +++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~--------~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l   68 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSI--------NKLEGLREDIYDALAGTRSDANIYVES----DEN   68 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGH--------HHHHHHHHHHHHHHTTSCCCCEEEEEE----TTC
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCch--------hhhHHHHHHHHHhHHhcCCCeEEEeCC----cch
Confidence            3799999999999999999999885  6888887  43        22211    1111 1111122332211    234


Q ss_pred             HHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchh
Q 025660           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (249)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (249)
                      .+.++++|+|||+||.......+.. .++..|+.+++.+++.+.+..  +.+|+++|.-+..-.   ....+..      
T Consensus        69 ~~al~gaD~Vi~~Ag~~~~~g~~r~-dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~~t---~~~~k~~------  136 (313)
T 1hye_A           69 LRIIDESDVVIITSGVPRKEGMSRM-DLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMT---YKALVDS------  136 (313)
T ss_dssp             GGGGTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHHHH---HHHHHHH------
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHHHH---HHHHHhh------
Confidence            5568899999999997543222333 789999999999999999987  566666665431100   0000000      


Q ss_pred             HhhhcCCCCchHHH-HHHHHHHHHHHHHHHcCCcEEEeecCeEeCC
Q 025660          157 YIRKLDSWGKSYAI-SKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~-sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~  201 (249)
                          -.+|...+|. +..-..++...+++..+++..-++...+-++
T Consensus       137 ----~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~~v~G~H  178 (313)
T 1hye_A          137 ----KFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRIIGEH  178 (313)
T ss_dssp             ----CCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEECS
T ss_pred             ----CcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEEEEeecc
Confidence                0113445676 6665666666666666776666665444443

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.99  E-value=3.3e-09  Score=88.23  Aligned_cols=114  Identities=15%  Similarity=0.012  Sum_probs=79.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEc--CCCCcccCCchhhh----hhccCCCCCCCeEEEEcCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVR--SELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++|+||||+|++|+.++..|+.++.  ++.++++  +.        ++.+    .+.........+.+...   +    .
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~--------~~~~~~~~dl~~~~~~~~~~~v~~~---~----~   65 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKE--------DDTVGQAADTNHGIAYDSNTRVRQG---G----Y   65 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGH--------HHHHHHHHHHHHHHTTTCCCEEEEC---C----G
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCCh--------hhHHHHHHHHHHHHhhCCCcEEEeC---C----H
Confidence            4799999999999999999999885  6888887  43        2221    11111011223344332   2    2


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccce
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~  136 (249)
                      +.++++|+|||+|+......... ..++..|+.+++.+++.+.+.. +..+|+++|.-+
T Consensus        66 ~a~~~aDvVi~~ag~~~~~g~~r-~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SNPv  122 (303)
T 1o6z_A           66 EDTAGSDVVVITAGIPRQPGQTR-IDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNPV  122 (303)
T ss_dssp             GGGTTCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSSH
T ss_pred             HHhCCCCEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCChH
Confidence            34779999999999754322233 3789999999999999999997 677888777543

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.98  E-value=3.5e-09  Score=77.70  Aligned_cols=102  Identities=12%  Similarity=0.041  Sum_probs=74.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~   82 (249)
                      ++++|+|+|+ |.+|+.+++.|.+.|++|++++|++        ++.+.+...     ....+.+|.++++.+.++ +++
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~--------~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~   70 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE--------EKVNAYASY-----ATHAVIANATEENELLSLGIRN   70 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH--------HHHHTTTTT-----CSEEEECCTTCHHHHHTTTGGG
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHh-----CCEEEEeCCCCHHHHHhcCCCC
Confidence            4568999997 9999999999999999999999986        444443322     246788999998888776 678


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      +|+||++++..      .     ..|.    .+.+.+++.+ +++++..++..
T Consensus        71 ~d~vi~~~~~~------~-----~~~~----~~~~~~~~~~-~~~ii~~~~~~  107 (144)
T 2hmt_A           71 FEYVIVAIGAN------I-----QAST----LTTLLLKELD-IPNIWVKAQNY  107 (144)
T ss_dssp             CSEEEECCCSC------H-----HHHH----HHHHHHHHTT-CSEEEEECCSH
T ss_pred             CCEEEECCCCc------h-----HHHH----HHHHHHHHcC-CCeEEEEeCCH
Confidence            99999988741      0     1222    3455666666 56777766644

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.96  E-value=6.5e-09  Score=76.40  Aligned_cols=74  Identities=19%  Similarity=0.257  Sum_probs=60.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~   82 (249)
                      ++++|+|+|+ |.+|+++++.|.++|++|+++++++        ++.+.+.+.     ...++.+|.++++.+.++ +++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~--------~~~~~~~~~-----~~~~~~gd~~~~~~l~~~~~~~   70 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSK--------EKIELLEDE-----GFDAVIADPTDESFYRSLDLEG   70 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH--------HHHHHHHHT-----TCEEEECCTTCHHHHHHSCCTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH--------HHHHHHHHC-----CCcEEECCCCCHHHHHhCCccc
Confidence            4568999996 8899999999999999999999987        665555443     467899999999988876 457


Q ss_pred             CCEEEEccc
Q 025660           83 CTGVLHVAT   91 (249)
Q Consensus        83 ~d~vih~a~   91 (249)
                      +|.||.+.+
T Consensus        71 ~d~vi~~~~   79 (141)
T 3llv_A           71 VSAVLITGS   79 (141)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEecC
Confidence            899997665

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.86  E-value=8.3e-09  Score=90.36  Aligned_cols=106  Identities=16%  Similarity=0.167  Sum_probs=77.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++|+|+| +|++|+++++.|++.|++|++.+|+.        ++.+.+.+..   ..+..+.+|+++.+++.++++++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~--------~~a~~la~~~---~~~~~~~~Dv~d~~~l~~~l~~~   69 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTL--------ESAKKLSAGV---QHSTPISLDVNDDAALDAEVAKH   69 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSH--------HHHHHTTTTC---TTEEEEECCTTCHHHHHHHHTTS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCH--------HHHHHHHHhc---CCceEEEeecCCHHHHHHHHcCC
Confidence            357899998 79999999999999999999999987        5555443321   24678899999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhh--hH-------HhHHHHHHHHHHhcC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQ--RA-------INGTLGILKSCLKSG  123 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~--~n-------~~~t~~l~~~~~~~~  123 (249)
                      |+|||+++.....  ......+.  .|       ...+..+++++++.+
T Consensus        70 DvVIn~a~~~~~~--~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG  116 (450)
T 1ff9_A           70 DLVISLIPYTFHA--TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG  116 (450)
T ss_dssp             SEEEECCC--CHH--HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred             cEEEECCccccch--HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC
Confidence            9999999863220  00001111  11       235778899998887

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.83  E-value=2.7e-08  Score=84.92  Aligned_cols=97  Identities=19%  Similarity=0.155  Sum_probs=73.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+.++|||+|.|| |++|+.+++.|. +.++|++.+|+.        ++.+.+.+      .+..+..|+.|.+++.+++
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~--------~~~~~~~~------~~~~~~~d~~d~~~l~~~~   75 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNN--------ENLEKVKE------FATPLKVDASNFDKLVEVM   75 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCH--------HHHHHHTT------TSEEEECCTTCHHHHHHHH
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCH--------HHHHHHhc------cCCcEEEecCCHHHHHHHH
Confidence            4556689999998 999999998875 468999999987        55555543      3567889999999999999


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      +++|+||+++++.-                 ...++++|.+.+  .+++=+|
T Consensus        76 ~~~DvVi~~~p~~~-----------------~~~v~~~~~~~g--~~yvD~s  108 (365)
T 3abi_A           76 KEFELVIGALPGFL-----------------GFKSIKAAIKSK--VDMVDVS  108 (365)
T ss_dssp             TTCSEEEECCCGGG-----------------HHHHHHHHHHHT--CEEEECC
T ss_pred             hCCCEEEEecCCcc-----------------cchHHHHHHhcC--cceEeee
Confidence            99999999987520                 125778888887  4766655

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.78  E-value=8.3e-08  Score=69.94  Aligned_cols=99  Identities=11%  Similarity=0.049  Sum_probs=70.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~   83 (249)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++|++        +..+.+.+..    .+..+.+|.++++.+.+. ++++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~--------~~~~~~~~~~----~~~~~~~d~~~~~~l~~~~~~~~   70 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK--------DICKKASAEI----DALVINGDCTKIKTLEDAGIEDA   70 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHC----SSEEEESCTTSHHHHHHTTTTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH--------HHHHHHHHhc----CcEEEEcCCCCHHHHHHcCcccC
Confidence            468999986 9999999999999999999999987        5544443211    356788999998877655 6689


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      |+||++...       .     ..|.    .+.+.++..+ .+++|..++
T Consensus        71 d~vi~~~~~-------~-----~~~~----~~~~~~~~~~-~~~ii~~~~  103 (140)
T 1lss_A           71 DMYIAVTGK-------E-----EVNL----MSSLLAKSYG-INKTIARIS  103 (140)
T ss_dssp             SEEEECCSC-------H-----HHHH----HHHHHHHHTT-CCCEEEECS
T ss_pred             CEEEEeeCC-------c-----hHHH----HHHHHHHHcC-CCEEEEEec
Confidence            999998652       1     1222    3445566666 567765443

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.75  E-value=3.6e-08  Score=78.11  Aligned_cols=76  Identities=21%  Similarity=0.368  Sum_probs=53.9

Q ss_pred             CCCeEEEecc----------------chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      ++++||||||                +|.+|.+++++|+++|++|+++.|...        .    .  +.....+..+ 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~--------~----~--~~~~~~~~~~-   66 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRA--------L----K--PEPHPNLSIR-   66 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTS--------C----C--CCCCTTEEEE-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcc--------c----c--ccCCCCeEEE-
Confidence            5789999999                899999999999999999999999751        0    0  0001234333 


Q ss_pred             cCCCChhh----HHHHHcCCCEEEEccccCCC
Q 025660           68 ADLSHPDG----FDAAIAGCTGVLHVATPVDF   95 (249)
Q Consensus        68 ~Dl~~~~~----~~~~~~~~d~vih~a~~~~~   95 (249)
                       |+...++    +.+.+.++|++||+||..++
T Consensus        67 -~v~s~~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           67 -EITNTKDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             -ECCSHHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             -EHhHHHHHHHHHHHhcCCCCEEEEcCccccc
Confidence             4545443    33334579999999998665

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.73  E-value=1.2e-07  Score=79.21  Aligned_cols=116  Identities=14%  Similarity=0.132  Sum_probs=80.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|.|+||+|++|..++..|+.+|  ++|+++++++      .......+..... ..++..+.    ..++++++++++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~------~~~~a~dL~~~~~-~~~l~~~~----~t~d~~~a~~~a   69 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH------TPGVAADLSHIET-RATVKGYL----GPEQLPDCLKGC   69 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS------HHHHHHHHTTSSS-SCEEEEEE----SGGGHHHHHTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc------cHHHHHHHhccCc-CceEEEec----CCCCHHHHhCCC
Confidence            379999999999999999999888  7999999976      0111112222211 11122221    124577788999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      |+||++||.......+.. +....|+...+.+++.+.+..+..+++++|-
T Consensus        70 DvVvi~ag~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           70 DVVVIPAGVPRKPGMTRD-DLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             SEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CEEEECCCcCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            999999997543222333 6789999999999999998874557777543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.72  E-value=1.2e-08  Score=88.19  Aligned_cols=78  Identities=17%  Similarity=0.160  Sum_probs=62.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC---CeEEEEEcCCCCcccCCchhhhhhccC-CC-CCCCeEEEEcCCCChhhHHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG---YSVTTTVRSELDPEHRNSKDLSFLKNL-PG-ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|+|+|| |+||+++++.|++.|   .+|++.+|+.        ++.+.+.+. .. ...++..+.+|+++.+++.+++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~--------~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l   72 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTL--------SKCQEIAQSIKAKGYGEIDITTVDADSIEELVALI   72 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCH--------HHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCH--------HHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHH
Confidence            58999998 899999999999998   3899999987        555444221 11 1135788999999999999999


Q ss_pred             cC--CCEEEEcccc
Q 025660           81 AG--CTGVLHVATP   92 (249)
Q Consensus        81 ~~--~d~vih~a~~   92 (249)
                      ++  +|+|||++++
T Consensus        73 ~~~~~DvVin~ag~   86 (405)
T 4ina_A           73 NEVKPQIVLNIALP   86 (405)
T ss_dssp             HHHCCSEEEECSCG
T ss_pred             HhhCCCEEEECCCc
Confidence            87  8999999985

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.63  E-value=6.8e-07  Score=66.65  Aligned_cols=75  Identities=13%  Similarity=0.088  Sum_probs=58.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~   82 (249)
                      .+++|+|+|+ |.+|+.+++.|.+.|++|++++|++        ++.+.+..  .  .+...+.+|..+++.+.+. +++
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~--------~~~~~~~~--~--~g~~~~~~d~~~~~~l~~~~~~~   84 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNE--------YAFHRLNS--E--FSGFTVVGDAAEFETLKECGMEK   84 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCG--------GGGGGSCT--T--CCSEEEESCTTSHHHHHTTTGGG
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH--------HHHHHHHh--c--CCCcEEEecCCCHHHHHHcCccc
Confidence            3478999995 9999999999999999999999987        44444431  1  1356778999988777665 678


Q ss_pred             CCEEEEccc
Q 025660           83 CTGVLHVAT   91 (249)
Q Consensus        83 ~d~vih~a~   91 (249)
                      +|+||.+.+
T Consensus        85 ad~Vi~~~~   93 (155)
T 2g1u_A           85 ADMVFAFTN   93 (155)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEEEeC
Confidence            999998876

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.63  E-value=1.5e-07  Score=74.45  Aligned_cols=74  Identities=18%  Similarity=0.170  Sum_probs=54.8

Q ss_pred             CCCeEEEecc----------------chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      .+++||||||                +|.+|.+++++|.++|++|+++++...            +. .+   ..+  -.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~------------l~-~~---~g~--~~   68 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS------------LP-TP---PFV--KR   68 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC------------CC-CC---TTE--EE
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc------------cc-cC---CCC--eE
Confidence            4689999999                699999999999999999999887651            00 11   122  24


Q ss_pred             cCCCChhhHHHHH----cCCCEEEEccccCCC
Q 025660           68 ADLSHPDGFDAAI----AGCTGVLHVATPVDF   95 (249)
Q Consensus        68 ~Dl~~~~~~~~~~----~~~d~vih~a~~~~~   95 (249)
                      +|+++.+++.+.+    .++|++||+||..+.
T Consensus        69 ~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           69 VDVMTALEMEAAVNASVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             EECCSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             EccCcHHHHHHHHHHhcCCCCEEEECCcccCC
Confidence            6888766544443    468999999997653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.62  E-value=6.1e-08  Score=85.12  Aligned_cols=77  Identities=19%  Similarity=0.233  Sum_probs=63.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++++|+|+|| |++|+++++.|++. |++|++++|+.        ++.+.+.+..    ++..+.+|+.+.+++.+++++
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~--------~ka~~la~~~----~~~~~~~D~~d~~~l~~~l~~   88 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTL--------ANAQALAKPS----GSKAISLDVTDDSALDKVLAD   88 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSH--------HHHHHHHGGG----TCEEEECCTTCHHHHHHHHHT
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCH--------HHHHHHHHhc----CCcEEEEecCCHHHHHHHHcC
Confidence            4578999997 99999999999998 78999999987        5555554321    356778999999999999999


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      +|+|||+++..
T Consensus        89 ~DvVIn~tp~~   99 (467)
T 2axq_A           89 NDVVISLIPYT   99 (467)
T ss_dssp             SSEEEECSCGG
T ss_pred             CCEEEECCchh
Confidence            99999999864

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.59  E-value=1.6e-08  Score=84.97  Aligned_cols=116  Identities=16%  Similarity=0.054  Sum_probs=77.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC--e-----EEEEEcCCCCcccCCchhhh----hhccCCCCCCCeEEEEcCCCCh
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY--S-----VTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHP   73 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~Dl~~~   73 (249)
                      .++|+||||+|+||++++..|+..+.  +     ++++++.+      ..++.+    .|.....  .-..    ++...
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~------~~~~~~g~a~DL~~~~~--~~~~----~~~~~   70 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP------MMGVLDGVLMELQDCAL--PLLK----DVIAT   70 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG------GHHHHHHHHHHHHHTCC--TTEE----EEEEE
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCC------ccccchhhHhhhHhhhh--cccC----CEEEc
Confidence            46899999999999999999998775  5     88888863      001111    1222110  1111    22223


Q ss_pred             hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcc-eEEEEcc
Q 025660           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK-RVVYTSS  133 (249)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~-~~v~~SS  133 (249)
                      +...+.++++|+|||+||.......+.. +.++.|+..++.+++.+.+..+.. +++.+|-
T Consensus        71 ~~~~~~~~daDvVvitAg~prkpG~tR~-dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           71 DKEEIAFKDLDVAILVGSMPRRDGMERK-DLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             SCHHHHTTTCSEEEECCSCCCCTTCCTT-TTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCcHHHhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            3456678899999999986543222233 788999999999999999987333 4666554

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.59  E-value=1.6e-07  Score=69.90  Aligned_cols=77  Identities=22%  Similarity=0.326  Sum_probs=60.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~   83 (249)
                      .++++|+|+ |.+|+.+++.|.+.|++|+++++++.       ++.+.+.+...  .++.++.+|.++++.+.++ ++++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~-------~~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~a   72 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPE-------DDIKQLEQRLG--DNADVIPGDSNDSSVLKKAGIDRC   72 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCH-------HHHHHHHHHHC--TTCEEEESCTTSHHHHHHHTTTTC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCh-------HHHHHHHHhhc--CCCeEEEcCCCCHHHHHHcChhhC
Confidence            468999995 99999999999999999999999741       33333332111  2478899999999999887 8899


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |.||-+.+
T Consensus        73 d~vi~~~~   80 (153)
T 1id1_A           73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEecC
Confidence            99997665

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.54  E-value=6.7e-07  Score=74.82  Aligned_cols=115  Identities=15%  Similarity=0.157  Sum_probs=79.3

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCCC-CCCCeEEEEcCCCCh
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLPG-ASERLRIFHADLSHP   73 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~~-~~~~~~~~~~Dl~~~   73 (249)
                      |+...++|.|+|+ |.+|+.++..|+..|.  +|+++++++        ++.+.    |..... ....+.+...|   .
T Consensus         1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~--------~k~~g~a~DL~~~~~~~~~~v~i~~~~---~   68 (326)
T 3pqe_A            1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNK--------EKAMGDVMDLNHGKAFAPQPVKTSYGT---Y   68 (326)
T ss_dssp             -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH--------HHHHHHHHHHHHTGGGSSSCCEEEEEC---G
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecch--------HHHHHHHHHHHhccccccCCeEEEeCc---H
Confidence            6666789999996 9999999999999986  899999976        44333    332211 11234444333   1


Q ss_pred             hhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                          +.++++|+||.+||..... .....+.+..|+...+.+++.+.+..+...++.+|
T Consensus        69 ----~a~~~aDvVvi~ag~p~kp-G~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           69 ----EDCKDADIVCICAGANQKP-GETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             ----GGGTTCSEEEECCSCCCCT-TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ----HHhCCCCEEEEecccCCCC-CccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence                3577999999999864332 22233788999999999999999887444555544

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.51  E-value=1.5e-06  Score=63.62  Aligned_cols=73  Identities=14%  Similarity=0.149  Sum_probs=60.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~   83 (249)
                      +++|+|.| .|.+|+.+++.|.+.|++|+++++++        ++.+.+.+.     ++..+.+|.++++.+.++ ++++
T Consensus         7 ~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~--------~~~~~~~~~-----g~~~i~gd~~~~~~l~~a~i~~a   72 (140)
T 3fwz_A            7 CNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSR--------TRVDELRER-----GVRAVLGNAANEEIMQLAHLECA   72 (140)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCH--------HHHHHHHHT-----TCEEEESCTTSHHHHHHTTGGGC
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHc-----CCCEEECCCCCHHHHHhcCcccC
Confidence            46899999 59999999999999999999999998        666666543     567899999999988775 5678


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |.||-+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            99886655

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.50  E-value=8.8e-07  Score=74.58  Aligned_cols=113  Identities=10%  Similarity=0.013  Sum_probs=76.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++++|.|+||+|++|+.++..|+..|  .+|++++++.        ++.+.    |........       ++.-..++.
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~--------~k~~g~a~DL~~~~~~~~-------~i~~t~d~~   71 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA--------VGLEGVAEEIRHCGFEGL-------NLTFTSDIK   71 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH--------HHHHHHHHHHHHHCCTTC-------CCEEESCHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc--------hhHHHHHHhhhhCcCCCC-------ceEEcCCHH
Confidence            45789999999999999999999998  5999999876        33332    222111111       122124566


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcce-EEEEc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR-VVYTS  132 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~-~v~~S  132 (249)
                      +.++++|+||.+||..... .....+.+..|+...+.+++.+.+..+... ++.+|
T Consensus        72 ~al~dADvVvitaG~p~kp-G~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           72 EALTDAKYIVSSGGAPRKE-GMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             HHHTTEEEEEECCC--------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             HHhCCCCEEEEccCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            7788999999999964332 222337889999999999999998873443 44554

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.46  E-value=9.6e-07  Score=67.60  Aligned_cols=73  Identities=16%  Similarity=0.127  Sum_probs=60.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH--Hc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA--IA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~   81 (249)
                      +++|+|+| .|.+|+.+++.|.+. |++|+++++++        ++.+.+.+.     ++..+.+|.++++.+.++  ++
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~--------~~~~~~~~~-----g~~~~~gd~~~~~~l~~~~~~~  104 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIRE--------EAAQQHRSE-----GRNVISGDATDPDFWERILDTG  104 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCH--------HHHHHHHHT-----TCCEEECCTTCHHHHHTBCSCC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCH--------HHHHHHHHC-----CCCEEEcCCCCHHHHHhccCCC
Confidence            45899998 699999999999999 99999999987        565555433     356788999999888776  77


Q ss_pred             CCCEEEEccc
Q 025660           82 GCTGVLHVAT   91 (249)
Q Consensus        82 ~~d~vih~a~   91 (249)
                      ++|.||.+.+
T Consensus       105 ~ad~vi~~~~  114 (183)
T 3c85_A          105 HVKLVLLAMP  114 (183)
T ss_dssp             CCCEEEECCS
T ss_pred             CCCEEEEeCC
Confidence            8999997655

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.36  E-value=9.8e-07  Score=69.57  Aligned_cols=73  Identities=21%  Similarity=0.250  Sum_probs=60.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d   84 (249)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++        ++.+.+.+..    +..++.+|.++++.+.++ ++++|
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~--------~~~~~l~~~~----~~~~i~gd~~~~~~l~~a~i~~ad   67 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDR--------ELCEEFAKKL----KATIIHGDGSHKEILRDAEVSKND   67 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCH--------HHHHHHHHHS----SSEEEESCTTSHHHHHHHTCCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH--------HHHHHHHHHc----CCeEEEcCCCCHHHHHhcCcccCC
Confidence            37999995 9999999999999999999999988        6665543321    457899999999999887 67899


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      .||-+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9985544

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.33  E-value=1e-06  Score=68.27  Aligned_cols=98  Identities=17%  Similarity=0.069  Sum_probs=65.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH---H
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA---I   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~---~   80 (249)
                      .+++|||+||+|.||.++++.+...|++|++++|++        ++.+.+.+..   ..   ...|.++.+..+.+   .
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~--------~~~~~~~~~g---~~---~~~d~~~~~~~~~~~~~~  103 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD--------AKREMLSRLG---VE---YVGDSRSVDFADEILELT  103 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHTTC---CS---EEEETTCSTHHHHHHHHT
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcC---CC---EEeeCCcHHHHHHHHHHh
Confidence            457899999999999999999999999999999987        5554444331   11   12466665433333   3


Q ss_pred             c--CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           81 A--GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        81 ~--~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      .  ++|+||+++|.          ..       ....++.+++   .+++|.+++..
T Consensus       104 ~~~~~D~vi~~~g~----------~~-------~~~~~~~l~~---~G~~v~~g~~~  140 (198)
T 1pqw_A          104 DGYGVDVVLNSLAG----------EA-------IQRGVQILAP---GGRFIELGKKD  140 (198)
T ss_dssp             TTCCEEEEEECCCT----------HH-------HHHHHHTEEE---EEEEEECSCGG
T ss_pred             CCCCCeEEEECCch----------HH-------HHHHHHHhcc---CCEEEEEcCCC
Confidence            2  48999999873          11       1233444443   35899988754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.24  E-value=4.4e-06  Score=69.83  Aligned_cols=112  Identities=13%  Similarity=0.105  Sum_probs=67.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhh----hhccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      .+++|.|+|| |.+|+.++..|+..|.  +++++++++        ++.+    .+.........+.+...|   .    
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~--------~k~~g~a~DL~~~~~~~~~~~i~~~~---~----   71 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFK--------DKTKGDAIDLEDALPFTSPKKIYSAE---Y----   71 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH--------HHHHHHHHHHHTTGGGSCCCEEEECC---G----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCCh--------HHHHHHHhhHhhhhhhcCCcEEEECc---H----
Confidence            4579999996 9999999999999886  899999876        4333    222221111234444333   2    


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      +.++++|+||++||.... +.....+.+..|+.-.+.+.+.+.+..+...++.+|
T Consensus        72 ~a~~~aDiVvi~ag~~~k-pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           72 SDAKDADLVVITAGAPQK-PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             GGGTTCSEEEECCCCC-----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             HHhcCCCEEEECCCCCCC-CCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            347799999999996432 122223778899999999999999887444555554

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=98.17  E-value=8.3e-06  Score=67.89  Aligned_cols=116  Identities=16%  Similarity=0.074  Sum_probs=76.8

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhh----ccCC---CCCCCeEEEEcCCCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFL----KNLP---GASERLRIFHADLSH   72 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l----~~~~---~~~~~~~~~~~Dl~~   72 (249)
                      |+++.++|.|+|+ |.+|..++..|...|+ +|+++++++.      .++.+..    ....   ....++.. ..|   
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~------~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---   72 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQL------ENPTKGKALDMLEASPVQGFDANIIG-TSD---   72 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGG------HHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccch------HHHHHHhhhhHHHhhhhccCCCEEEE-cCC---
Confidence            6555679999996 9999999999999999 9999999820      0222211    1100   01112221 122   


Q ss_pred             hhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      .    +.++++|+||.++|.......+. .+.+..|....+.+.+.+.+..+...++.+|
T Consensus        73 ~----~a~~~aDvVIiaag~p~kpg~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           73 Y----ADTADSDVVVITAGIARKPGMSR-DDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             G----GGGTTCSEEEECCSCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             H----HHhCCCCEEEEeCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            2    35679999999998644322233 3788999999999999999887344555555

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.16  E-value=2.3e-05  Score=65.36  Aligned_cols=117  Identities=8%  Similarity=0.085  Sum_probs=71.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++++|.|+|| |.+|..++..|+..+.  +|+++++++.    +.......+.........+.+..   .+.+    .++
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~----~~~g~~~dl~~~~~~~~~~~i~~---~~~~----a~~   73 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKE----KAIGEAMDINHGLPFMGQMSLYA---GDYS----DVK   73 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC-------CCHHHHHHTTSCCCTTCEEEC-----CGG----GGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChH----HHHHHHHHHHHhHHhcCCeEEEE---CCHH----HhC
Confidence            4578999997 9999999999999987  9999999861    00111122222211112333322   2222    478


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      ++|+||.+++......... .+....|+...+.+++.+.+..+...++. .|.
T Consensus        74 ~aDvVii~~g~p~k~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tN  124 (318)
T 1y6j_A           74 DCDVIVVTAGANRKPGETR-LDLAKKNVMIAKEVTQNIMKYYNHGVILV-VSN  124 (318)
T ss_dssp             TCSEEEECCCC------CH-HHHHHHHHHHHHHHHHHHHHHCCSCEEEE-CSS
T ss_pred             CCCEEEEcCCCCCCCCcCH-HHHHHhhHHHHHHHHHHHHHhCCCcEEEE-ecC
Confidence            9999999998643211222 36788999999999999998763344444 453

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.13  E-value=3.5e-06  Score=71.88  Aligned_cols=76  Identities=17%  Similarity=0.197  Sum_probs=59.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|+|+|+ |.||+.+++.|...|++|++++|++        ++.+.+.+...  ..   +.+|..+.+++.++++++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~--------~~~~~~~~~~g--~~---~~~~~~~~~~l~~~~~~~  230 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNH--------KRLQYLDDVFG--GR---VITLTATEANIKKSVQHA  230 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHTT--TS---EEEEECCHHHHHHHHHHC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHhcC--ce---EEEecCCHHHHHHHHhCC
Confidence            3579999998 9999999999999999999999987        55544433111  12   456777888899999999


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+||++++..
T Consensus       231 DvVi~~~g~~  240 (369)
T 2eez_A          231 DLLIGAVLVP  240 (369)
T ss_dssp             SEEEECCC--
T ss_pred             CEEEECCCCC
Confidence            9999999863

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.11  E-value=5.4e-06  Score=69.52  Aligned_cols=75  Identities=16%  Similarity=0.191  Sum_probs=54.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      .+++|||+||+|.||..+++.+...|++|++++|+.        ++.+.+.++..   .   ...|.++.+++.+.+.  
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~--------~~~~~~~~~g~---~---~~~d~~~~~~~~~~~~~~  210 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD--------EKIAYLKQIGF---D---AAFNYKTVNSLEEALKKA  210 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---S---EEEETTSCSCHHHHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHhcCC---c---EEEecCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999886        55555544311   1   2347666333333332  


Q ss_pred             ---CCCEEEEcccc
Q 025660           82 ---GCTGVLHVATP   92 (249)
Q Consensus        82 ---~~d~vih~a~~   92 (249)
                         ++|+||+++|.
T Consensus       211 ~~~~~d~vi~~~g~  224 (333)
T 1v3u_A          211 SPDGYDCYFDNVGG  224 (333)
T ss_dssp             CTTCEEEEEESSCH
T ss_pred             hCCCCeEEEECCCh
Confidence               58999999983

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.08  E-value=7.8e-06  Score=69.01  Aligned_cols=75  Identities=20%  Similarity=0.344  Sum_probs=54.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      .+++|||+||+|.||..+++.+...|++|++++|++        ++.+.+.++..   .   ...|+++.+++.+.+.  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~--------~~~~~~~~~g~---~---~~~d~~~~~~~~~~~~~~  234 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGE--------GKEELFRSIGG---E---VFIDFTKEKDIVGAVLKA  234 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECST--------THHHHHHHTTC---C---EEEETTTCSCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCH--------HHHHHHHHcCC---c---eEEecCccHhHHHHHHHH
Confidence            457899999999999999999999999999999987        45554444311   1   2237765444444333  


Q ss_pred             ---CCCEEEEcccc
Q 025660           82 ---GCTGVLHVATP   92 (249)
Q Consensus        82 ---~~d~vih~a~~   92 (249)
                         ++|+||+++|.
T Consensus       235 ~~~~~D~vi~~~g~  248 (347)
T 2hcy_A          235 TDGGAHGVINVSVS  248 (347)
T ss_dssp             HTSCEEEEEECSSC
T ss_pred             hCCCCCEEEECCCc
Confidence               58999999884

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.08  E-value=4.1e-06  Score=69.68  Aligned_cols=83  Identities=10%  Similarity=0.040  Sum_probs=58.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .++++||+|+ |.+|++++..|.+.|. +|+++.|+.     +..++.+.+.+.........+...++.+.+++.+.+.+
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~-----~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~  226 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKD-----DFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE  226 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS-----TTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCC-----chHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC
Confidence            4679999997 7899999999999998 899999983     00144443321111001233445577777788888889


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+|||+-..
T Consensus       227 aDiIINaTp~  236 (315)
T 3tnl_A          227 SVIFTNATGV  236 (315)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECccC
Confidence            9999988654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.07  E-value=1.8e-05  Score=68.36  Aligned_cols=74  Identities=18%  Similarity=0.227  Sum_probs=61.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~   82 (249)
                      .+++|+|+|. |.+|+.+++.|.+.|++|+++++++        +..+.+...     .+.++.||.++++.+.++ +++
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~--------~~v~~~~~~-----g~~vi~GDat~~~~L~~agi~~   68 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDP--------DHIETLRKF-----GMKVFYGDATRMDLLESAGAAK   68 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCH--------HHHHHHHHT-----TCCCEESCTTCHHHHHHTTTTT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHhC-----CCeEEEcCCCCHHHHHhcCCCc
Confidence            3568999994 8899999999999999999999998        666666543     467899999999998887 778


Q ss_pred             CCEEEEccc
Q 025660           83 CTGVLHVAT   91 (249)
Q Consensus        83 ~d~vih~a~   91 (249)
                      +|.||-+..
T Consensus        69 A~~viv~~~   77 (413)
T 3l9w_A           69 AEVLINAID   77 (413)
T ss_dssp             CSEEEECCS
T ss_pred             cCEEEECCC
Confidence            999886654

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.06  E-value=4.5e-06  Score=66.43  Aligned_cols=71  Identities=13%  Similarity=0.104  Sum_probs=58.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~   83 (249)
                      .++++|+|+ |.+|+.+++.|.+.|+ |+++++++        +..+.+. .     ++.++.+|.++++.+.++ ++++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~--------~~~~~~~-~-----~~~~i~gd~~~~~~l~~a~i~~a   72 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDEN--------VRKKVLR-S-----GANFVHGDPTRVSDLEKANVRGA   72 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGG--------GHHHHHH-T-----TCEEEESCTTCHHHHHHTTCTTC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCH--------HHHHHHh-c-----CCeEEEcCCCCHHHHHhcCcchh
Confidence            468999996 9999999999999999 99999887        5554444 1     478899999999998887 7889


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |.||.+.+
T Consensus        73 d~vi~~~~   80 (234)
T 2aef_A           73 RAVIVDLE   80 (234)
T ss_dssp             SEEEECCS
T ss_pred             cEEEEcCC
Confidence            99997654

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.04  E-value=4.7e-06  Score=69.95  Aligned_cols=114  Identities=15%  Similarity=0.083  Sum_probs=75.5

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhh----hccC---CCCCCCeEEEEcCCCChh
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSF----LKNL---PGASERLRIFHADLSHPD   74 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~----l~~~---~~~~~~~~~~~~Dl~~~~   74 (249)
                      .++++|.|+|| |.+|..++..|...|+ +|+++++++        ++.+.    +...   .....++..       ..
T Consensus         7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~--------~~~~~~~~~l~~~~~~~~~~~~i~~-------t~   70 (331)
T 1pzg_A            7 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVK--------GMPEGKALDLSHVTSVVDTNVSVRA-------EY   70 (331)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS--------SHHHHHHHHHHHHHHHTTCCCCEEE-------EC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCh--------hHHHHHHHHHHhhhhccCCCCEEEE-------eC
Confidence            34568999997 9999999999999998 999999987        33322    1110   011112221       13


Q ss_pred             hHHHHHcCCCEEEEccccCCCCCC-----ChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           75 GFDAAIAGCTGVLHVATPVDFEDK-----EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~-----~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      ++++.++++|+||-+++.......     ... .....|+.-.+.+++.+.+.. ..-++...|.
T Consensus        71 d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~-dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tN  133 (331)
T 1pzg_A           71 SYEAALTGADCVIVTAGLTKVPGKPDSEWSRN-DLLPFNSKIIREIGQNIKKYC-PKTFIIVVTN  133 (331)
T ss_dssp             SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGG-GGHHHHHHHHHHHHHHHHHHC-TTCEEEECCS
T ss_pred             CHHHHhCCCCEEEEccCCCCCCCcccCCCCHH-HHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcC
Confidence            355578899999999976432111     223 667888888899999998876 4445544443

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.04  E-value=2e-06  Score=67.39  Aligned_cols=73  Identities=21%  Similarity=0.196  Sum_probs=50.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+|+|+||+|.+|+++++.|.+.|++|++++|++        ++.+.+.+....  .+.  ..|+. .+++.++++++|+
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~--------~~~~~~~~~~~~--~~~--~~~~~-~~~~~~~~~~~D~   67 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE--------EKAEAKAAEYRR--IAG--DASIT-GMKNEDAAEACDI   67 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH--------HHHHHHHHHHHH--HHS--SCCEE-EEEHHHHHHHCSE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhcc--ccc--cCCCC-hhhHHHHHhcCCE
Confidence            3799999999999999999999999999999986        443333211000  000  02222 2456677788999


Q ss_pred             EEEccc
Q 025660           86 VLHVAT   91 (249)
Q Consensus        86 vih~a~   91 (249)
                      ||++..
T Consensus        68 Vi~~~~   73 (212)
T 1jay_A           68 AVLTIP   73 (212)
T ss_dssp             EEECSC
T ss_pred             EEEeCC
Confidence            999876

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.00  E-value=6.3e-05  Score=62.45  Aligned_cols=115  Identities=14%  Similarity=0.096  Sum_probs=74.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC-C--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH-G--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      |+|.|+||+|.+|..++..|..+ +  .+++++++.+.     ..-....+...+ ...++..+.+     +...+.+++
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~-----~~G~a~Dl~~~~-~~~~v~~~~~-----~~~~~~~~~   69 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-----TPGVAVDLSHIP-TAVKIKGFSG-----EDATPALEG   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT-----HHHHHHHHHTSC-SSEEEEEECS-----SCCHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC-----chhHHHHhhCCC-CCceEEEecC-----CCcHHHhCC
Confidence            47999999999999999998875 5  58899988751     111112222221 1111222211     122346789


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      +|+||.+||..... .....+.++.|..-.+.+.+.+.+..+...++.+|
T Consensus        70 aDivii~ag~~rkp-G~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           70 ADVVLISAGVARKP-GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             CSEEEECCSCSCCT-TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCEEEEeCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99999999965432 22234889999999999999999887344555554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.98  E-value=4.8e-06  Score=69.28  Aligned_cols=110  Identities=14%  Similarity=0.094  Sum_probs=71.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhh----hccCC---CCCCCeEEEEcCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSF----LKNLP---GASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~----l~~~~---~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++|.|+|| |.+|..++..|...|+ +|+++++++        ++.+.    +....   ....++.. ..|      + 
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~--------~~~~g~~~dl~~~~~~~~~~~~i~~-t~d------~-   65 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVE--------GVPQGKALDLYEASPIEGFDVRVTG-TNN------Y-   65 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSS--------SHHHHHHHHHHTTHHHHTCCCCEEE-ESC------G-
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCc--------cHHHHHHHhHHHhHhhcCCCeEEEE-CCC------H-
Confidence            58999998 9999999999999997 999998876        33222    11110   00112221 123      2 


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      +.++++|+||.+++..... ..........|+...+.+.+.+.+.. ...++.+.|.
T Consensus        66 ~a~~~aD~Vi~a~g~p~~~-g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tN  120 (309)
T 1ur5_A           66 ADTANSDVIVVTSGAPRKP-GMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNN  120 (309)
T ss_dssp             GGGTTCSEEEECCCC---------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCS
T ss_pred             HHHCCCCEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCC
Confidence            3477999999999864331 11112567888899999999999887 5566655564

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.97  E-value=8.8e-06  Score=68.03  Aligned_cols=74  Identities=8%  Similarity=-0.051  Sum_probs=53.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH---H
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA---I   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~---~   80 (249)
                      .+++|||+||+|.||..+++.+...|++|++++|++        ++.+.+.++..   .   ...|.++.+..+++   .
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~--------~~~~~~~~~g~---~---~~~~~~~~~~~~~~~~~~  205 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA--------QKAQSALKAGA---W---QVINYREEDLVERLKEIT  205 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHHHTC---S---EEEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcCC---C---EEEECCCccHHHHHHHHh
Confidence            357899999999999999999999999999999986        55555544311   1   12355555433333   3


Q ss_pred             c--CCCEEEEccc
Q 025660           81 A--GCTGVLHVAT   91 (249)
Q Consensus        81 ~--~~d~vih~a~   91 (249)
                      .  ++|+||+++|
T Consensus       206 ~~~~~D~vi~~~g  218 (327)
T 1qor_A          206 GGKKVRVVYDSVG  218 (327)
T ss_dssp             TTCCEEEEEECSC
T ss_pred             CCCCceEEEECCc
Confidence            2  5899999998

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.96  E-value=7.3e-05  Score=62.53  Aligned_cols=113  Identities=16%  Similarity=0.097  Sum_probs=76.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ..++|.|+|| |.+|..++..|+.+|.  ++++++++.        ++.+.    +...........++..  .|.+   
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~--------~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~---   83 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIE--------DKLKGEMMDLQHGSLFLKTPKIVSS--KDYS---   83 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH--------HHHHHHHHHHHHTGGGCSCCEEEEC--SSGG---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCCh--------HHHHHHHHhhhhhhhccCCCeEEEc--CCHH---
Confidence            4578999997 9999999999999986  899999876        33332    2222111111122222  1222   


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                       .++++|+||.+||.......+. .+.+..|..-.+.+.+.+.+..+...++.+|
T Consensus        84 -~~~~aDiVvi~aG~~~kpG~tR-~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           84 -VTANSKLVIITAGARQQEGESR-LNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             -GGTTEEEEEECCSCCCCTTCCG-GGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             -HhCCCCEEEEccCCCCCCCccH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence             3779999999999754322223 3789999999999999999887344555555

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.95  E-value=8.4e-05  Score=61.19  Aligned_cols=111  Identities=11%  Similarity=0.049  Sum_probs=74.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCC-CCCCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLP-GASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~-~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |+|.|+|| |.+|.+++..|...|+  +|+++++++        ++.+.    +.... .......+...  +|    .+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~--------~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~   65 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAE--------DLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YS   65 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSH--------HHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCh--------HHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HH
Confidence            47999998 9999999999999987  999999987        43321    11110 01112222211  12    23


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      .++++|+||.++|.......+. .+....|..-.+.+.+.+.+..+...++.+|
T Consensus        66 a~~~aDiVViaag~~~kpG~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           66 LLKGSEIIVVTAGLARKPGMTR-LDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             GGTTCSEEEECCCCCCCSSCCH-HHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             HhCCCCEEEECCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            5789999999998643322223 3788999999999999999987445555555

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.95  E-value=1.1e-05  Score=67.58  Aligned_cols=75  Identities=16%  Similarity=0.127  Sum_probs=54.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+++|||+||+|.||..+++.+...|++|++++|++        ++.+.+.++..   .   ...|.++.+   .+.+..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~--------~~~~~~~~~g~---~---~~~d~~~~~~~~~i~~~~  210 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE--------EKAETARKLGC---H---HTINYSTQDFAEVVREIT  210 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHTC---S---EEEETTTSCHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC---C---EEEECCCHHHHHHHHHHh
Confidence            357899999999999999999999999999999987        55555544311   1   123555544   333333


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|+||+++|.
T Consensus       211 ~~~~~d~vi~~~g~  224 (333)
T 1wly_A          211 GGKGVDVVYDSIGK  224 (333)
T ss_dssp             TTCCEEEEEECSCT
T ss_pred             CCCCCeEEEECCcH
Confidence            2  58999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.94  E-value=1.8e-05  Score=67.00  Aligned_cols=75  Identities=11%  Similarity=0.047  Sum_probs=54.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh---HHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG---FDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~---~~~~~   80 (249)
                      .+++|||+||+|.||..+++.+...|++|++++|++        ++.+.+.++..   .   ...|..+.+.   +.+..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~ga---~---~~~d~~~~~~~~~~~~~~  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTE--------EGQKIVLQNGA---H---EVFNHREVNYIDKIKKYV  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---S---EEEETTSTTHHHHHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh--------hHHHHHHHcCC---C---EEEeCCCchHHHHHHHHc
Confidence            357899999999999999999999999999999987        55555444321   1   2245555443   33333


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|+||+++|.
T Consensus       236 ~~~~~D~vi~~~G~  249 (351)
T 1yb5_A          236 GEKGIDIIIEMLAN  249 (351)
T ss_dssp             CTTCEEEEEESCHH
T ss_pred             CCCCcEEEEECCCh
Confidence            3  58999999983

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.91  E-value=1.7e-05  Score=67.20  Aligned_cols=75  Identities=16%  Similarity=0.036  Sum_probs=54.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh---HHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG---FDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~---~~~~~   80 (249)
                      .+++|||+||+|.||..+++.+...|++|++++|++        ++.+.+.++..   .   ...|..+.+.   +.+..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~g~---~---~~~~~~~~~~~~~~~~~~  227 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ--------KKLQMAEKLGA---A---AGFNYKKEDFSEATLKFT  227 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHTC---S---EEEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcCC---c---EEEecCChHHHHHHHHHh
Confidence            357899999999999999999999999999999987        55555543321   1   2245555443   33333


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|+||+++|.
T Consensus       228 ~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          228 KGAGVNLILDCIGG  241 (354)
T ss_dssp             TTSCEEEEEESSCG
T ss_pred             cCCCceEEEECCCc
Confidence            2  58999999984

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.89  E-value=1.4e-05  Score=66.80  Aligned_cols=111  Identities=11%  Similarity=-0.009  Sum_probs=74.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhh----hhccCCC-CCCCeEEE-EcCCCChhhHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLS----FLKNLPG-ASERLRIF-HADLSHPDGFD   77 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~----~l~~~~~-~~~~~~~~-~~Dl~~~~~~~   77 (249)
                      +++|.|+| +|.+|..++..|...|. +|+++++++        ++.+    .+..... .+....+. ..|   .    
T Consensus         5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~--------~~~~g~a~dL~~~~~~~~~~~~v~~t~d---~----   68 (321)
T 3p7m_A            5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQ--------GMPNGKALDLLQTCPIEGVDFKVRGTND---Y----   68 (321)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSS--------SHHHHHHHHHHTTHHHHTCCCCEEEESC---G----
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCCh--------HHHHHHHHHHHhhhhhcCCCcEEEEcCC---H----
Confidence            46899999 59999999999999888 999999987        3322    2222110 00112222 222   2    


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      +.++++|+||.++|......... .+.+..|+...+.+++.+.+..+...++.+|
T Consensus        69 ~a~~~aDvVIi~ag~p~k~G~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           69 KDLENSDVVIVTAGVPRKPGMSR-DDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HHHCCCCEEEEcCCcCCCCCCCH-HHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            35779999999998643322223 3778899999999999999887344555554

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.88  E-value=1.6e-05  Score=66.95  Aligned_cols=75  Identities=12%  Similarity=0.094  Sum_probs=53.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhh----HHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDG----FDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~----~~~   78 (249)
                      .+++|||+||+|.||..+++.+...|++|++++|++        ++.+.+. ++..   . .  ..|.++.++    +.+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~--------~~~~~~~~~~g~---~-~--~~d~~~~~~~~~~~~~  220 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK--------EKVDLLKTKFGF---D-D--AFNYKEESDLTAALKR  220 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTSCC---S-E--EEETTSCSCSHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHcCC---c-e--EEecCCHHHHHHHHHH
Confidence            357899999999999999999999999999999987        5555554 3321   1 1  235554322    332


Q ss_pred             HH-cCCCEEEEcccc
Q 025660           79 AI-AGCTGVLHVATP   92 (249)
Q Consensus        79 ~~-~~~d~vih~a~~   92 (249)
                      +. .++|+||+++|.
T Consensus       221 ~~~~~~d~vi~~~g~  235 (345)
T 2j3h_A          221 CFPNGIDIYFENVGG  235 (345)
T ss_dssp             HCTTCEEEEEESSCH
T ss_pred             HhCCCCcEEEECCCH
Confidence            22 258999999883

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.88  E-value=0.00011  Score=61.54  Aligned_cols=112  Identities=12%  Similarity=0.082  Sum_probs=74.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++++|.|+|| |.+|..++..|+..+.  ++.+++++.        ++.+.    +.........+.+.. |  +.    
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~--------~~~~g~~~dl~~~~~~~~~~~i~~-~--~~----   71 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFK--------DKTKGDAIDLSNALPFTSPKKIYS-A--EY----   71 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH--------HHHHHHHHHHHTTGGGSCCCEEEE-C--CG----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCc--------hHhHHHHHHHHHHHHhcCCeEEEE-C--CH----
Confidence            4568999998 9999999999988875  899999875        33322    222111112334433 2  22    


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      +.++++|+||.+++......... ..+...|+...+.+.+.+.+..+...++.+|
T Consensus        72 ~a~~~aDvVii~ag~~~k~g~~R-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           72 SDAKDADLVVITAGAPQKPGETR-LDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             GGGGGCSEEEECCCCC-----CH-HHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             HHhCCCCEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            23779999999998643322222 3678899999999999998887455666653

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.88  E-value=6.1e-06  Score=68.94  Aligned_cols=111  Identities=14%  Similarity=0.051  Sum_probs=73.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhh----hhccC---CCCCCCeEEEEcCCCChhh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLS----FLKNL---PGASERLRIFHADLSHPDG   75 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~----~l~~~---~~~~~~~~~~~~Dl~~~~~   75 (249)
                      ++++|.|+|| |.+|..++..|...|+ +|+++++++        ++.+    .+...   .....++.. ..|   .  
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~--------~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~--   70 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAE--------GTPQGKGLDIAESSPVDGFDAKFTG-AND---Y--   70 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS--------SHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G--
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCc--------hhHHHHHHHHhchhhhcCCCCEEEE-eCC---H--
Confidence            3568999997 9999999999999998 999999987        3322    11111   001112211 223   1  


Q ss_pred             HHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           76 FDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        76 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                        +.++++|+||.++|......... .+.+..|+.-.+.+++.+.+..+...++.+|
T Consensus        71 --~a~~~aDiVIiaag~p~k~G~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           71 --AAIEGADVVIVTAGVPRKPGMSR-DDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             --GGGTTCSEEEECCSCCCC------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             --HHHCCCCEEEEccCcCCCCCCCH-HHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence              35789999999998643211122 2677889999999999999887344555555

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.87  E-value=2.7e-05  Score=65.90  Aligned_cols=72  Identities=13%  Similarity=0.029  Sum_probs=52.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhcc-CCCCCCCeEEEEcCCCChhh---HHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDG---FDAAI   80 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~---~~~~~   80 (249)
                      ++|||+||+|.||..+++.+...|+ +|++++++.        ++.+.+.+ +..   .   ...|..+.+.   +.+..
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~--------~~~~~~~~~~g~---~---~~~d~~~~~~~~~~~~~~  227 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH--------EKCILLTSELGF---D---AAINYKKDNVAEQLRESC  227 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHHHTSCC---S---EEEETTTSCHHHHHHHHC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH--------HHHHHHHHHcCC---c---eEEecCchHHHHHHHHhc
Confidence            7899999999999999999999999 999999986        55555543 311   1   2346655432   33322


Q ss_pred             c-CCCEEEEccc
Q 025660           81 A-GCTGVLHVAT   91 (249)
Q Consensus        81 ~-~~d~vih~a~   91 (249)
                      . ++|+||+++|
T Consensus       228 ~~~~d~vi~~~G  239 (357)
T 2zb4_A          228 PAGVDVYFDNVG  239 (357)
T ss_dssp             TTCEEEEEESCC
T ss_pred             CCCCCEEEECCC
Confidence            2 5899999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.85  E-value=3.4e-05  Score=64.72  Aligned_cols=75  Identities=16%  Similarity=0.072  Sum_probs=54.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+++|||+||+|.||..+++.+...|++|++++|++        ++.+.+ +++..   .   ...|..+.+..+.+.+ 
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~~g~---~---~~~~~~~~~~~~~~~~~  214 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA--------EKCRFLVEELGF---D---GAIDYKNEDLAAGLKRE  214 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTCC---S---EEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHcCC---C---EEEECCCHHHHHHHHHh
Confidence            457899999999999999999999999999999987        666665 44421   1   1235555433333322 


Q ss_pred             ---CCCEEEEcccc
Q 025660           82 ---GCTGVLHVATP   92 (249)
Q Consensus        82 ---~~d~vih~a~~   92 (249)
                         ++|+||+++|.
T Consensus       215 ~~~~~d~vi~~~g~  228 (336)
T 4b7c_A          215 CPKGIDVFFDNVGG  228 (336)
T ss_dssp             CTTCEEEEEESSCH
T ss_pred             cCCCceEEEECCCc
Confidence               58999999984

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.84  E-value=0.00017  Score=60.03  Aligned_cols=111  Identities=12%  Similarity=0.090  Sum_probs=73.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hcc-CCCCCCCeEEEEcCCCChhhH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKN-LPGASERLRIFHADLSHPDGF   76 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~-~~~~~~~~~~~~~Dl~~~~~~   76 (249)
                      ++++|.|+|| |.+|..++..|..++  .+|.++++++        ++.+.    +.. .+..+..+.+.. |  +    
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~--------~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----   68 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDT--------EKVRGDVMDLKHATPYSPTTVRVKA-G--E----   68 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCH--------HHHHHHHHHHHHHGGGSSSCCEEEE-C--C----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh--------hHhhhhhhhHHhhhhhcCCCeEEEe-C--C----
Confidence            3468999998 999999999999888  4899998875        22221    111 111112333332 2  2    


Q ss_pred             HHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEE
Q 025660           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (249)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~  131 (249)
                      .+.++++|+||.+++......... ......|+.-.+.+.+.+.+..+...++.+
T Consensus        69 ~~a~~~aDvVvi~ag~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (317)
T 3d0o_A           69 YSDCHDADLVVICAGAAQKPGETR-LDLVSKNLKIFKSIVGEVMASKFDGIFLVA  122 (317)
T ss_dssp             GGGGTTCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence            234779999999998744322223 367889999999999999888734445543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.80  E-value=5.9e-05  Score=62.87  Aligned_cols=112  Identities=13%  Similarity=0.125  Sum_probs=72.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++++|.|+|| |.+|..++..|+..+.  ++.++++++        ++.+.    +.........+.+.. |  +.    
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~--------~~~~g~~~dl~~~~~~~~~~~v~~-~--~~----   67 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK--------DRTKGDALDLEDAQAFTAPKKIYS-G--EY----   67 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHGGGGGSCCCEEEE-C--CG----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCc--------hHHHHHHHHHHHHHHhcCCeEEEE-C--CH----
Confidence            3468999998 9999999999998875  899999975        33332    211111112334333 2  22    


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      +.++++|+||.+++......... .+....|+...+.+.+.+.+..+...++.+|
T Consensus        68 ~a~~~aDvVii~ag~~~~~g~~R-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           68 SDCKDADLVVITAGAPQKPGESR-LDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             GGGTTCSEEEECCCC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             HHhCCCCEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            34789999999998643311122 2677899999999999999887455666653

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.78  E-value=0.00027  Score=58.80  Aligned_cols=114  Identities=18%  Similarity=0.221  Sum_probs=73.5

Q ss_pred             CCC-CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hcc-CCCCCCCeEEEEcCCCC
Q 025660            1 MEE-GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKN-LPGASERLRIFHADLSH   72 (249)
Q Consensus         1 m~~-~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~-~~~~~~~~~~~~~Dl~~   72 (249)
                      |++ ++++|.|+|+ |.+|..++..|...|.  +|+++++++        ++.+.    +.. .........+.. |  +
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~--------~~~~~~~~dl~~~~~~~~~~~~i~~-~--~   68 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANE--------SKAIGDAMDFNHGKVFAPKPVDIWH-G--D   68 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHHHTTSSSSCCEEEE-C--C
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCc--------chHHHHHhhHHHHhhhcCCCeEEEc-C--c
Confidence            654 3468999998 9999999999988774  899999986        32221    111 111111334432 2  2


Q ss_pred             hhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEE
Q 025660           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (249)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~  131 (249)
                      .    +.++++|+||.+++.......... ..+..|..-.+.+++.+.+..+...++.+
T Consensus        69 ~----~al~~aDvViia~~~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~~iv~  122 (316)
T 1ldn_A           69 Y----DDCRDADLVVICAGANQKPGETRL-DLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (316)
T ss_dssp             G----GGTTTCSEEEECCSCCCCTTTCSG-GGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             H----HHhCCCCEEEEcCCCCCCCCCCHH-HHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence            2    247799999999987543222222 66788888888899988887633344443

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.78  E-value=3.8e-05  Score=62.56  Aligned_cols=75  Identities=16%  Similarity=0.157  Sum_probs=50.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++++|+|+ |.+|++++..|.+.|++|++++|+.        ++.+.+.+.......+  ...|+   +++.+  .++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~--------~~~~~la~~~~~~~~~--~~~~~---~~~~~--~~~  181 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV--------SRAEELAKLFAHTGSI--QALSM---DELEG--HEF  181 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH--------HHHHHHHHHTGGGSSE--EECCS---GGGTT--CCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHHhhccCCe--eEecH---HHhcc--CCC
Confidence            4578999998 6799999999999999999999987        5544443211110112  12333   32222  579


Q ss_pred             CEEEEccccCC
Q 025660           84 TGVLHVATPVD   94 (249)
Q Consensus        84 d~vih~a~~~~   94 (249)
                      |+||++++...
T Consensus       182 DivVn~t~~~~  192 (271)
T 1nyt_A          182 DLIINATSSGI  192 (271)
T ss_dssp             SEEEECCSCGG
T ss_pred             CEEEECCCCCC
Confidence            99999998643

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.74  E-value=3e-05  Score=67.98  Aligned_cols=72  Identities=19%  Similarity=0.291  Sum_probs=60.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~   82 (249)
                      ..|+|+|.| .|-+|+.|++.|.++||+|+++++++        +..+.+.+..    .+..+.||.++++-++++ +++
T Consensus         2 ~~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~--------~~~~~~~~~~----~~~~i~Gd~~~~~~L~~Agi~~   68 (461)
T 4g65_A            2 NAMKIIILG-AGQVGGTLAENLVGENNDITIVDKDG--------DRLRELQDKY----DLRVVNGHASHPDVLHEAGAQD   68 (461)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCH--------HHHHHHHHHS----SCEEEESCTTCHHHHHHHTTTT
T ss_pred             CcCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHhc----CcEEEEEcCCCHHHHHhcCCCc
Confidence            346899999 58899999999999999999999998        6776665322    467899999999999888 678


Q ss_pred             CCEEEE
Q 025660           83 CTGVLH   88 (249)
Q Consensus        83 ~d~vih   88 (249)
                      +|.+|-
T Consensus        69 ad~~ia   74 (461)
T 4g65_A           69 ADMLVA   74 (461)
T ss_dssp             CSEEEE
T ss_pred             CCEEEE
Confidence            998874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.73  E-value=2.9e-05  Score=64.46  Aligned_cols=83  Identities=12%  Similarity=0.054  Sum_probs=54.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .++++||+|+ |..|++++..|.+.|. +|+++.|+..     ..++.+.+.+.........+...+..+.+.+.+.+.+
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~-----~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~  220 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDD-----FFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS  220 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSST-----HHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCc-----hHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC
Confidence            4679999996 8899999999999998 8999999840     0134443322110001223334455565555667778


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+|||+-..
T Consensus       221 ~DiIINaTp~  230 (312)
T 3t4e_A          221 ADILTNGTKV  230 (312)
T ss_dssp             CSEEEECSST
T ss_pred             ceEEEECCcC
Confidence            9999988654

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.72  E-value=6.7e-05  Score=63.33  Aligned_cols=98  Identities=11%  Similarity=0.153  Sum_probs=57.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-----C-eEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-----Y-SVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      |++|.|.||||.+|+.|++.|++++     + +++.+.++..     ..+...... .+.. ...+.+  .|+ +++   
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~-----agk~~~~~~~~l~~-~~~~~~--~~~-~~~---   76 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATS-----AGSTLGEHHPHLTP-LAHRVV--EPT-EAA---   76 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSC-----TTSBGGGTCTTCGG-GTTCBC--EEC-CHH---
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCc-----CCCchhhhcccccc-cceeee--ccC-CHH---
Confidence            4689999999999999999999887     4 7777754330     001111100 0000 001111  122 222   


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                       .+.++|+|+.+.+...                 +..+++.+ +.+  .++|-+|+..
T Consensus        77 -~~~~~DvVf~alg~~~-----------------s~~~~~~~-~~G--~~vIDlSa~~  113 (352)
T 2nqt_A           77 -VLGGHDAVFLALPHGH-----------------SAVLAQQL-SPE--TLIIDCGADF  113 (352)
T ss_dssp             -HHTTCSEEEECCTTSC-----------------CHHHHHHS-CTT--SEEEECSSTT
T ss_pred             -HhcCCCEEEECCCCcc-----------------hHHHHHHH-hCC--CEEEEECCCc
Confidence             2458999998877421                 23556666 666  4788888865

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.70  E-value=3.1e-05  Score=64.68  Aligned_cols=112  Identities=12%  Similarity=0.066  Sum_probs=71.2

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhh----hccC---CCCCCCeEEEEcCCCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSF----LKNL---PGASERLRIFHADLSH   72 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~----l~~~---~~~~~~~~~~~~Dl~~   72 (249)
                      |+ .+++|.|+|| |.+|..++..|...|+ +|+++++++        ++.+.    +...   .....++.. ..|   
T Consensus         1 m~-~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~--------~~l~~~~~~l~~~~~~~~~~~~i~~-t~d---   66 (322)
T 1t2d_A            1 MA-PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVK--------NMPHGKALDTSHTNVMAYSNCKVSG-SNT---   66 (322)
T ss_dssp             -C-CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS--------SHHHHHHHHHHTHHHHHTCCCCEEE-ECC---
T ss_pred             CC-CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCH--------HHHHHHHHHHHhhhhhcCCCcEEEE-CCC---
Confidence            44 4568999997 9999999999999998 999999886        33221    1111   001112221 123   


Q ss_pred             hhhHHHHHcCCCEEEEccccCCCCCCC-----hHHHhhhhHHhHHHHHHHHHHhcCCcceEEEE
Q 025660           73 PDGFDAAIAGCTGVLHVATPVDFEDKE-----PEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (249)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~-----~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~  131 (249)
                         + +.++++|+||.+++........     .. .....|+.-.+.+++.+.+..+...++.+
T Consensus        67 ---~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  125 (322)
T 1t2d_A           67 ---Y-DDLAGADVVIVTAGFTKAPGKSDKEWNRD-DLLPLNNKIMIEIGGHIKKNCPNAFIIVV  125 (322)
T ss_dssp             ---G-GGGTTCSEEEECCSCSSCTTCCSTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             ---H-HHhCCCCEEEEeCCCCCCCCCCcccccHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence               2 3478999999999854321111     22 66778888888888888887633344444

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.68  E-value=4.7e-05  Score=64.05  Aligned_cols=97  Identities=20%  Similarity=0.207  Sum_probs=65.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+++|||+||+|.+|..+++.+...|++|++++|++        ++.+.+.++..   . .  ..|.++.+   .+.++.
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~--------~~~~~~~~~ga---~-~--~~d~~~~~~~~~~~~~~  231 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE--------DKLRRAKALGA---D-E--TVNYTHPDWPKEVRRLT  231 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHTC---S-E--EEETTSTTHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHhcCC---C-E--EEcCCcccHHHHHHHHh
Confidence            357899999999999999999999999999999987        55555543311   1 2  23665543   344443


Q ss_pred             c--CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           81 A--GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        81 ~--~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      .  ++|+||+++|. ..                ....++.++..   ++++.+++.
T Consensus       232 ~~~~~d~vi~~~g~-~~----------------~~~~~~~l~~~---G~~v~~g~~  267 (343)
T 2eih_A          232 GGKGADKVVDHTGA-LY----------------FEGVIKATANG---GRIAIAGAS  267 (343)
T ss_dssp             TTTCEEEEEESSCS-SS----------------HHHHHHHEEEE---EEEEESSCC
T ss_pred             CCCCceEEEECCCH-HH----------------HHHHHHhhccC---CEEEEEecC
Confidence            2  58999999982 11                12334444443   588888864

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.68  E-value=4.6e-05  Score=62.45  Aligned_cols=69  Identities=14%  Similarity=0.192  Sum_probs=49.7

Q ss_pred             CCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ..++++|.|+|++|.+|+++++.|.+.|++|++++|++        ++.+.+.+.     ++     +..+   ..++++
T Consensus         8 ~~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~-----g~-----~~~~---~~~~~~   66 (286)
T 3c24_A            8 DVGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP--------EGRDRLQGM-----GI-----PLTD---GDGWID   66 (286)
T ss_dssp             SCCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH--------HHHHHHHHT-----TC-----CCCC---SSGGGG
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHhc-----CC-----CcCC---HHHHhc
Confidence            33457999999889999999999999999999999987        555544432     11     1122   223567


Q ss_pred             CCCEEEEccc
Q 025660           82 GCTGVLHVAT   91 (249)
Q Consensus        82 ~~d~vih~a~   91 (249)
                      ++|+||.+..
T Consensus        67 ~aDvVi~av~   76 (286)
T 3c24_A           67 EADVVVLALP   76 (286)
T ss_dssp             TCSEEEECSC
T ss_pred             CCCEEEEcCC
Confidence            8999996654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.67  E-value=1.4e-05  Score=58.60  Aligned_cols=71  Identities=14%  Similarity=0.170  Sum_probs=51.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++|+.        ++.+.+.+...    ....     ..+++.++++++|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~--------~~~~~~a~~~~----~~~~-----~~~~~~~~~~~~D   82 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNI--------DHVRAFAEKYE----YEYV-----LINDIDSLIKNND   82 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCH--------HHHHHHHHHHT----CEEE-----ECSCHHHHHHTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCH--------HHHHHHHHHhC----CceE-----eecCHHHHhcCCC
Confidence            578999995 9999999999999999999999987        55544432211    1111     2344566788999


Q ss_pred             EEEEccccC
Q 025660           85 GVLHVATPV   93 (249)
Q Consensus        85 ~vih~a~~~   93 (249)
                      +||.+.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999987754

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.67  E-value=0.00036  Score=57.73  Aligned_cols=110  Identities=16%  Similarity=0.189  Sum_probs=67.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      ++|.|+|| |.+|..++..|...|+  +|+++++++        ++.+.    +...........+...   +.    +.
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~--------~~~~~~~~~l~~~~~~~~~~~i~~~---~~----~a   64 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDE--------DRAQAEAEDIAHAAPVSHGTRVWHG---GH----SE   64 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH--------HHHHHHHHHHTTSCCTTSCCEEEEE---CG----GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHhhhhhhhhcCCeEEEEC---CH----HH
Confidence            47999997 9999999999999998  999999986        33222    1111111112233221   22    24


Q ss_pred             HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ++++|+||.+++......... .+....|+...+.+++.+.+.. ...++.+.|
T Consensus        65 ~~~aDvVIi~~~~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~t  116 (304)
T 2v6b_A           65 LADAQVVILTAGANQKPGESR-LDLLEKNADIFRELVPQITRAA-PDAVLLVTS  116 (304)
T ss_dssp             GTTCSEEEECC-------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECS
T ss_pred             hCCCCEEEEcCCCCCCCCCcH-HHHHHhHHHHHHHHHHHHHHhC-CCeEEEEec
Confidence            779999999997533211112 2567888998899999988876 344443334

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.66  E-value=3.9e-05  Score=63.78  Aligned_cols=111  Identities=11%  Similarity=0.007  Sum_probs=70.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCCCCcccCCchhhhhhc-cCCC----CCCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLK-NLPG----ASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~----~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |+|.|+|+ |.+|..++..|...  |++|+++++++        ++.+.+. ++..    ......+...  +|.   ++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~--------~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~   66 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVE--------GIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD   66 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSS--------SHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh--------hHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH
Confidence            37999997 99999999999985  79999999987        3333221 0100    0011121110  222   23


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                       ++++|+||-+++.......... .....|+...+.+++.+.+..+...++.+|
T Consensus        67 -l~~aDvViiav~~p~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           67 -TANSDIVIITAGLPRKPGMTRE-DLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             -GTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             -HCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence             6789999999875322112233 677889999999999988876344555553

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.66  E-value=7.4e-05  Score=63.15  Aligned_cols=75  Identities=21%  Similarity=0.169  Sum_probs=53.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+++|||+||+|.||..+++.+...|.+|+++++++        ++.+.+.++..   . ..  .|..+.+   .+.++.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~lGa---~-~~--~~~~~~~~~~~~~~~~  232 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGST--------GKCEACERLGA---K-RG--INYRSEDFAAVIKAET  232 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHTC---S-EE--EETTTSCHHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhcCC---C-EE--EeCCchHHHHHHHHHh
Confidence            357899999999999999999999999999999987        56665554421   1 22  3444433   333333


Q ss_pred             -cCCCEEEEcccc
Q 025660           81 -AGCTGVLHVATP   92 (249)
Q Consensus        81 -~~~d~vih~a~~   92 (249)
                       .++|+||+++|.
T Consensus       233 ~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 GQGVDIILDMIGA  245 (353)
T ss_dssp             SSCEEEEEESCCG
T ss_pred             CCCceEEEECCCH
Confidence             258999999984

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.64  E-value=0.00014  Score=60.41  Aligned_cols=111  Identities=7%  Similarity=0.009  Sum_probs=71.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCC-CCCCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLP-GASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~-~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |+|.|+|+ |.+|+.++..|+..|.  +|+++++++        ++.+.    +.... .......+...|  +.    +
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~--------~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~----~   65 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKD--------GMPQGKALDMRESSPIHGFDTRVTGTN--DY----G   65 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSST--------THHHHHHHHHHHHHHHHTCCCEEEEES--SS----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCch--------HHHHHHHHHHhccccccCCCcEEEECC--CH----H
Confidence            47999996 9999999999999886  999999987        33221    11110 001122332111  12    3


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      .++++|+||.+||.......+. .+.+..|..-.+.+.+.+.+..+...++.+|
T Consensus        66 a~~~aDvVii~ag~~~kpG~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           66 PTEDSDVCIITAGLPRSPGMSR-DDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             GGTTCSEEEECCCC-------C-HHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             HhCCCCEEEECCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            5679999999998643321222 3788999999999999999887444555554

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.63  E-value=3.5e-05  Score=65.44  Aligned_cols=75  Identities=21%  Similarity=0.297  Sum_probs=55.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      .++|+|+|+ |.+|+.+++.+...|.+|++++|++        ++.+.+.+...  ..+..   +..+.+++.+.+.++|
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~--------~r~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~D  232 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINV--------ERLSYLETLFG--SRVEL---LYSNSAEIETAVAEAD  232 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHG--GGSEE---EECCHHHHHHHHHTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHhhC--ceeEe---eeCCHHHHHHHHcCCC
Confidence            478999998 9999999999999999999999987        55555433211  11211   1234566777788999


Q ss_pred             EEEEccccC
Q 025660           85 GVLHVATPV   93 (249)
Q Consensus        85 ~vih~a~~~   93 (249)
                      +||++.+..
T Consensus       233 vVI~~~~~~  241 (361)
T 1pjc_A          233 LLIGAVLVP  241 (361)
T ss_dssp             EEEECCCCT
T ss_pred             EEEECCCcC
Confidence            999998763

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.63  E-value=0.00016  Score=60.85  Aligned_cols=101  Identities=12%  Similarity=0.088  Sum_probs=57.5

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+ ++++|.|.||+|.+|+.+++.|.++.+ +++.+.++.        +.-..+.+........  ....+.+.+   + 
T Consensus         1 M~-~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~--------~~g~~~~~~~~~~~g~--~~~~~~~~~---~-   65 (345)
T 2ozp_A            1 MT-GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR--------FAGEPVHFVHPNLRGR--TNLKFVPPE---K-   65 (345)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST--------TTTSBGGGTCGGGTTT--CCCBCBCGG---G-
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch--------hhCchhHHhCchhcCc--ccccccchh---H-
Confidence            43 356899999999999999999998765 877776643        1111111111000000  001122222   2 


Q ss_pred             HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      +.++|+|+.+.+..                 .+..+++.+.+.+  .++|-+|+..
T Consensus        66 ~~~vDvV~~a~g~~-----------------~s~~~a~~~~~aG--~~VId~Sa~~  102 (345)
T 2ozp_A           66 LEPADILVLALPHG-----------------VFAREFDRYSALA--PVLVDLSADF  102 (345)
T ss_dssp             CCCCSEEEECCCTT-----------------HHHHTHHHHHTTC--SEEEECSSTT
T ss_pred             hcCCCEEEEcCCcH-----------------HHHHHHHHHHHCC--CEEEEcCccc
Confidence            46899999887741                 1234555556666  4688888753

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.63  E-value=0.0012  Score=55.46  Aligned_cols=173  Identities=12%  Similarity=0.003  Sum_probs=98.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcCCCCcccCCchhhh----hhccCCCCCCCeEEEEcCCCChh
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPD   74 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~Dl~~~~   74 (249)
                      -||.|+||+|.||+.|+..|.....       ++.+++..+      ..+..+    .|+.... ......+.++     
T Consensus        25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~------~~~~~~Gva~DL~~~~~-~~~~~~~~~~-----   92 (345)
T 4h7p_A           25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEP------ALKALAGVEAELEDCAF-PLLDKVVVTA-----   92 (345)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG------GHHHHHHHHHHHHHTTC-TTEEEEEEES-----
T ss_pred             CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCC------ccccchhhhhhhhhcCc-cCCCcEEEcC-----
Confidence            4899999999999999988876532       688888764      111112    1222211 1112222221     


Q ss_pred             hHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCc
Q 025660           75 GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (249)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (249)
                      +..+.++++|+||-+||..... ....++.++.|..-.+.+.+.+.+..+..-+|.+-|.-+-.-.   ....+...   
T Consensus        93 ~~~~a~~~advVvi~aG~prkp-GmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~---~i~~~~~~---  165 (345)
T 4h7p_A           93 DPRVAFDGVAIAIMCGAFPRKA-GMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNA---LILLKSAQ---  165 (345)
T ss_dssp             CHHHHTTTCSEEEECCCCCCCT-TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH---HHHHHHTT---
T ss_pred             ChHHHhCCCCEEEECCCCCCCC-CCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHH---HHHHHHcc---
Confidence            2356788999999999975432 2233489999999999999999886423444444432210000   00000000   


Q ss_pred             hhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCC
Q 025660          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~  202 (249)
                           ..++++..-+.+..-.-++...+++..+++...|+-..|.|..
T Consensus       166 -----g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~H  208 (345)
T 4h7p_A          166 -----GKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNH  208 (345)
T ss_dssp             -----TCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCS
T ss_pred             -----CCCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCC
Confidence                 0112233444455544555555666668877777766666653

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.63  E-value=8.7e-05  Score=62.52  Aligned_cols=75  Identities=13%  Similarity=0.122  Sum_probs=54.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~   79 (249)
                      .+++|||+||+|.||..+++.+... |++|+++++++        ++.+.+.++..   . .  ..|..+.+   .+.++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~--------~~~~~~~~~g~---~-~--~~~~~~~~~~~~~~~~  235 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE--------EAVEAAKRAGA---D-Y--VINASMQDPLAEIRRI  235 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH--------HHHHHHHHHTC---S-E--EEETTTSCHHHHHHHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCH--------HHHHHHHHhCC---C-E--EecCCCccHHHHHHHH
Confidence            4578999999989999999999998 99999999887        55555444311   1 1  23444443   35555


Q ss_pred             Hc--CCCEEEEcccc
Q 025660           80 IA--GCTGVLHVATP   92 (249)
Q Consensus        80 ~~--~~d~vih~a~~   92 (249)
                      ..  ++|+||+++|.
T Consensus       236 ~~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          236 TESKGVDAVIDLNNS  250 (347)
T ss_dssp             TTTSCEEEEEESCCC
T ss_pred             hcCCCceEEEECCCC
Confidence            53  68999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.62  E-value=0.00012  Score=61.26  Aligned_cols=75  Identities=12%  Similarity=0.058  Sum_probs=54.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh---hhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~---~~~~~~~   80 (249)
                      .+++|||+||+|.||..+++.+...|.+|+++++++        ++.+.+.++..    ...  .|..+.   +.+.++.
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~ga----~~~--~~~~~~~~~~~~~~~~  213 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD--------EKLKIAKEYGA----EYL--INASKEDILRQVLKFT  213 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC----SEE--EETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC----cEE--EeCCCchHHHHHHHHh
Confidence            457899999999999999999999999999999987        56665555421    122  344343   3344443


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|+|++++|.
T Consensus       214 ~~~g~D~vid~~g~  227 (334)
T 3qwb_A          214 NGKGVDASFDSVGK  227 (334)
T ss_dssp             TTSCEEEEEECCGG
T ss_pred             CCCCceEEEECCCh
Confidence            2  58999999984

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.62  E-value=0.00076  Score=56.27  Aligned_cols=112  Identities=18%  Similarity=0.053  Sum_probs=74.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEE-EEcCCCChhhH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRI-FHADLSHPDGF   76 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~-~~~Dl~~~~~~   76 (249)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++++++        ++.+.    +...........+ ...|..     
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~--------~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-----   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVME--------DKLKGEMMDLEHGSLFLHTAKIVSGKDYS-----   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCH--------HHHHHHHHHHHHHGGGSCCSEEEEESSSC-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCH--------HHHHHHHHHhhhhhhcccCCeEEEcCCHH-----
Confidence            3478999998 9999999999999986  999999876        33222    1111000111122 233432     


Q ss_pred             HHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                       + ++++|+||-+||.......+. .+.+..|..-.+.+.+.+.+..+...++.+|
T Consensus        86 -~-~~daDiVIitaG~p~kpG~tR-~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           86 -V-SAGSKLVVITAGARQQEGESR-LNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             -S-CSSCSEEEECCSCCCCSSCCT-TGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             -H-hCCCCEEEEeCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence             2 679999999999754322222 3788999999999999999886344555555

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.62  E-value=7.6e-05  Score=61.61  Aligned_cols=75  Identities=13%  Similarity=0.079  Sum_probs=53.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++++|+|+ |.+|++++..|.+.|. +|++++|+.        ++.+.+.+.......      ++.+.+++.+.+.+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~--------~ka~~la~~~~~~~~------~~~~~~~~~~~~~~  204 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTV--------EKAERLVREGDERRS------AYFSLAEAETRLAE  204 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSH--------HHHHHHHHHSCSSSC------CEECHHHHHHTGGG
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHHHhhhccC------ceeeHHHHHhhhcc
Confidence            4578999997 7799999999999997 999999987        555554322111000      11233556677788


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      +|+||++.+..
T Consensus       205 aDivIn~t~~~  215 (297)
T 2egg_A          205 YDIIINTTSVG  215 (297)
T ss_dssp             CSEEEECSCTT
T ss_pred             CCEEEECCCCC
Confidence            99999998764

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.61  E-value=0.00015  Score=56.92  Aligned_cols=66  Identities=20%  Similarity=0.197  Sum_probs=49.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++|.|+| +|.+|+++++.|.+.|++|++++|+.        ++.+.+.+.     ++...        ++.++++++|
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~-----g~~~~--------~~~~~~~~~D   85 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNP--------KRTARLFPS-----AAQVT--------FQEEAVSSPE   85 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSH--------HHHHHHSBT-----TSEEE--------EHHHHTTSCS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHc-----CCcee--------cHHHHHhCCC
Confidence            46899999 89999999999999999999999987        554444332     22221        3556778899


Q ss_pred             EEEEcccc
Q 025660           85 GVLHVATP   92 (249)
Q Consensus        85 ~vih~a~~   92 (249)
                      +||.+...
T Consensus        86 vVi~av~~   93 (215)
T 2vns_A           86 VIFVAVFR   93 (215)
T ss_dssp             EEEECSCG
T ss_pred             EEEECCCh
Confidence            99987764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.61  E-value=3.5e-05  Score=57.50  Aligned_cols=75  Identities=15%  Similarity=0.217  Sum_probs=50.7

Q ss_pred             chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh--hhHHHHHc------CCCE
Q 025660           14 TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP--DGFDAAIA------GCTG   85 (249)
Q Consensus        14 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~------~~d~   85 (249)
                      +|.++.+.++.|.+.|.+|++..|+..+.. ...+..+.+.+   .+.+...+.+|++++  +++.++++      +-|+
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~-~~~~~~~~~~~---~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dV  100 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKD-AHPDEGKLVTQ---AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDV  100 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTT-SCTTHHHHHHH---TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCccccc-ccccHHHHHHH---cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCE
Confidence            467899999999999999998888652100 00000111221   233566788999999  88877765      2299


Q ss_pred             EEEcccc
Q 025660           86 VLHVATP   92 (249)
Q Consensus        86 vih~a~~   92 (249)
                      +|||||.
T Consensus       101 LVnnAgg  107 (157)
T 3gxh_A          101 LVHCLAN  107 (157)
T ss_dssp             EEECSBS
T ss_pred             EEECCCC
Confidence            9999996

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.60  E-value=0.0003  Score=59.24  Aligned_cols=96  Identities=16%  Similarity=0.227  Sum_probs=63.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh---hhHHHHHc-
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAAIA-   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~-   81 (249)
                      ++++|+||+|.||...++.+...|.+|+++++++        ++.+.+.++..    ..+  .|..+.   +.+.++.. 
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~--------~~~~~~~~~Ga----~~~--~~~~~~~~~~~v~~~~~~  231 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRD--------EQIALLKDIGA----AHV--LNEKAPDFEATLREVMKA  231 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCG--------GGHHHHHHHTC----SEE--EETTSTTHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC----CEE--EECCcHHHHHHHHHHhcC
Confidence            6899999999999999998888899999999887        55555544321    122  233333   23444332 


Q ss_pred             -CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           82 -GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        82 -~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                       ++|+|++++|.          ..       ....++.++.   .++++.+++..
T Consensus       232 ~g~D~vid~~g~----------~~-------~~~~~~~l~~---~G~iv~~G~~~  266 (349)
T 3pi7_A          232 EQPRIFLDAVTG----------PL-------ASAIFNAMPK---RARWIIYGRLD  266 (349)
T ss_dssp             HCCCEEEESSCH----------HH-------HHHHHHHSCT---TCEEEECCCSC
T ss_pred             CCCcEEEECCCC----------hh-------HHHHHhhhcC---CCEEEEEeccC
Confidence             69999999984          11       1233444444   35899888643

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.59  E-value=0.001  Score=55.15  Aligned_cols=110  Identities=12%  Similarity=0.096  Sum_probs=74.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      +||.|+|| |.+|..++..|+..+  .++.++++++        ++.+.    +...........+.. +  +.+    .
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~--------~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~----a   64 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDR--------KLAQAHAEDILHATPFAHPVWVWA-G--SYG----D   64 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH--------HHHHHHHHHHHTTGGGSCCCEEEE-C--CGG----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh--------hHHHHHHHHHHHhHhhcCCeEEEE-C--CHH----H
Confidence            47999998 999999999999887  6899999976        33332    222111112334333 2  233    4


Q ss_pred             HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      ++++|+||.+++......... ......|+...+.+.+.+.+..+...++.+|
T Consensus        65 ~~~aD~Vii~ag~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           65 LEGARAVVLAAGVAQRPGETR-LQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             GTTEEEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             hCCCCEEEECCCCCCCCCcCH-HHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            789999999998644322223 3678899999999999999887455666553

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.59  E-value=5.3e-05  Score=63.56  Aligned_cols=70  Identities=11%  Similarity=0.072  Sum_probs=58.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d   84 (249)
                      ++++|.|+ |.+|+.+++.|.++|+ |+++++++        ++.+ +.+.     +..++.+|.++++.+.++ ++++|
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~--------~~~~-~~~~-----~~~~i~gd~~~~~~L~~a~i~~a~  179 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDEN--------VRKK-VLRS-----GANFVHGDPTRVSDLEKANVRGAR  179 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGG--------GHHH-HHHT-----TCEEEESCTTSHHHHHHTCSTTEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCCh--------hhhh-HHhC-----CcEEEEeCCCCHHHHHhcChhhcc
Confidence            57999995 9999999999999999 99999887        5555 4432     578999999999999888 77899


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      .|+-+.+
T Consensus       180 ~vi~~~~  186 (336)
T 1lnq_A          180 AVIVDLE  186 (336)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            9886543

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.57  E-value=0.00017  Score=60.60  Aligned_cols=76  Identities=18%  Similarity=0.163  Sum_probs=53.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC-hhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-PDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~-   81 (249)
                      .+++|||+||+|.||..+++.+...|.+|++++++.        ++.+.+.++..    ..++..+ .+ .+.+.++.. 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~ga----~~v~~~~-~~~~~~v~~~~~~  225 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRT--------AATEFVKSVGA----DIVLPLE-EGWAKAVREATGG  225 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHTC----SEEEESS-TTHHHHHHHHTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhcCC----cEEecCc-hhHHHHHHHHhCC
Confidence            357899999999999999999999999999999987        55555544321    1233333 22 233444443 


Q ss_pred             -CCCEEEEcccc
Q 025660           82 -GCTGVLHVATP   92 (249)
Q Consensus        82 -~~d~vih~a~~   92 (249)
                       ++|+|++++|.
T Consensus       226 ~g~Dvvid~~g~  237 (342)
T 4eye_A          226 AGVDMVVDPIGG  237 (342)
T ss_dssp             SCEEEEEESCC-
T ss_pred             CCceEEEECCch
Confidence             48999999984

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.57  E-value=0.0006  Score=57.80  Aligned_cols=117  Identities=13%  Similarity=0.044  Sum_probs=72.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC--e---EEEEEcCCCCcccCCchhhh----hhccCCCCCCCeEEEEcCCCChhh
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY--S---VTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDG   75 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~---V~~~~r~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~Dl~~~~~   75 (249)
                      ..+|.|+||+|.||.+++-.|...+.  +   +.+.+.+..    ...++.+    .|......  -...+..  ..  .
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~----~~~~~~~G~amDL~h~~~p--~~~~v~i--~~--~  101 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSE----RSFQALEGVAMELEDSLYP--LLREVSI--GI--D  101 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG----GGHHHHHHHHHHHHTTTCT--TEEEEEE--ES--C
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCcc----chhhhhHHHHHhHHhhhhh--hcCCcEE--ec--C
Confidence            46899999999999999999998763  3   666555431    0101111    12221110  1111111  11  2


Q ss_pred             HHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEc
Q 025660           76 FDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTS  132 (249)
Q Consensus        76 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~S  132 (249)
                      -.+.++++|+||-+||.......+. .+.+..|..-.+.+.+.+.+. .+...++.+|
T Consensus       102 ~y~~~~daDvVVitag~prkpG~tR-~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs  158 (375)
T 7mdh_A          102 PYEVFEDVDWALLIGAKPRGPGMER-AALLDINGQIFADQGKALNAVASKNVKVLVVG  158 (375)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CHHHhCCCCEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            3556789999999998644322233 388999999999999999885 5344555554

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.56  E-value=0.00011  Score=61.32  Aligned_cols=75  Identities=19%  Similarity=0.115  Sum_probs=53.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+++|||+||+|.||..+++.+...|.+|+++++++        ++.+.+.++..   . ..  .|..+.+   .+.+..
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~Ga---~-~~--~~~~~~~~~~~~~~~~  205 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSP--------EKAAHAKALGA---W-ET--IDYSHEDVAKRVLELT  205 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHHHTC---S-EE--EETTTSCHHHHHHHHT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC---C-EE--EeCCCccHHHHHHHHh
Confidence            357899999999999999999988999999999987        56555554321   1 22  3444433   344444


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|+|++++|.
T Consensus       206 ~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          206 DGKKCPVVYDGVGQ  219 (325)
T ss_dssp             TTCCEEEEEESSCG
T ss_pred             CCCCceEEEECCCh
Confidence            3  58999999984

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.55  E-value=4.6e-05  Score=63.52  Aligned_cols=114  Identities=14%  Similarity=0.064  Sum_probs=71.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhh----ccC---CCCCCCeEEEEcCCCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFL----KNL---PGASERLRIFHADLSH   72 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l----~~~---~~~~~~~~~~~~Dl~~   72 (249)
                      |. ++++|.|+|| |.+|..++..|...|+ +|+++++++        ++.+..    ...   .....++.. ..|   
T Consensus         1 M~-~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~--------~~~~~~~~~l~~~~~~~~~~~~i~~-t~d---   66 (317)
T 2ewd_A            1 MI-ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAE--------GIPQGKALDITHSMVMFGSTSKVIG-TDD---   66 (317)
T ss_dssp             CC-CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS--------SHHHHHHHHHHHHHHHHTCCCCEEE-ESC---
T ss_pred             CC-CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCc--------hHHHHHHHHHHhhhhhcCCCcEEEE-CCC---
Confidence            54 4568999997 9999999999999998 999999987        332221    000   000112221 122   


Q ss_pred             hhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                         + +.++++|+||-+++......... .+....|....+.+++.+.+..+...++.+|.
T Consensus        67 ---~-~a~~~aDiVi~avg~p~~~g~~r-~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           67 ---Y-ADISGSDVVIITASIPGRPKDDR-SELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             ---G-GGGTTCSEEEECCCCSSCCSSCG-GGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             ---H-HHhCCCCEEEEeCCCCCCCCCcH-HHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence               2 24678999999998643321122 25566777778888888877653334444443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.53  E-value=0.0003  Score=59.02  Aligned_cols=97  Identities=13%  Similarity=0.098  Sum_probs=64.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+++|||+|| |.+|..+++.+...|++|++++|++        ++.+.+.++..   .   ...|..+.+   .+.++.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~lGa---~---~~~d~~~~~~~~~~~~~~  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD--------EKLELAKELGA---D---LVVNPLKEDAAKFMKEKV  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHTTC---S---EEECTTTSCHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHCCC---C---EEecCCCccHHHHHHHHh
Confidence            3578999999 7799999999999999999999887        56665554421   1   124655432   333333


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      .++|+||+++|..         .       .....++.+++.   ++++.+++.
T Consensus       229 ~~~d~vid~~g~~---------~-------~~~~~~~~l~~~---G~~v~~g~~  263 (339)
T 1rjw_A          229 GGVHAAVVTAVSK---------P-------AFQSAYNSIRRG---GACVLVGLP  263 (339)
T ss_dssp             SSEEEEEESSCCH---------H-------HHHHHHHHEEEE---EEEEECCCC
T ss_pred             CCCCEEEECCCCH---------H-------HHHHHHHHhhcC---CEEEEeccc
Confidence            5799999998841         1       122344444443   588888764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.53  E-value=0.00017  Score=60.57  Aligned_cols=75  Identities=12%  Similarity=0.057  Sum_probs=53.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+++|||+||+|.||..+++.+...|.+|+++++++        ++.+.+.++..   . ..  .|..+.+   .+.++.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~lga---~-~~--~~~~~~~~~~~~~~~~  209 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN--------KHTEELLRLGA---A-YV--IDTSTAPLYETVMELT  209 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS--------TTHHHHHHHTC---S-EE--EETTTSCHHHHHHHHT
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhCCC---c-EE--EeCCcccHHHHHHHHh
Confidence            357999999999999999998888899999999987        55555544321   1 22  2444433   333333


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|+||+++|.
T Consensus       210 ~~~g~Dvvid~~g~  223 (340)
T 3gms_A          210 NGIGADAAIDSIGG  223 (340)
T ss_dssp             TTSCEEEEEESSCH
T ss_pred             CCCCCcEEEECCCC
Confidence            3  58999999984

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.50  E-value=0.0005  Score=57.78  Aligned_cols=32  Identities=22%  Similarity=0.261  Sum_probs=26.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC---eEEEEE
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTV   36 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~   36 (249)
                      +++|+|.||+|.+|+.+++.|.+++|   +++.+.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~   40 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   40 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            46899999999999999999997765   455553

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.50  E-value=6.8e-05  Score=61.45  Aligned_cols=77  Identities=19%  Similarity=0.280  Sum_probs=52.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccC-CCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+++++|+|+ |.+|++++..|.+.|. +|++++|+.        ++.+.+.+. ......+.+...+   .+++.+.++
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~--------~~a~~la~~~~~~~~~~~i~~~~---~~~l~~~l~  193 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT--------SRAQALADVINNAVGREAVVGVD---ARGIEDVIA  193 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSH--------HHHHHHHHHHHHHHTSCCEEEEC---STTHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCH--------HHHHHHHHHHHhhcCCceEEEcC---HHHHHHHHh
Confidence            4679999997 7899999999999998 799999987        554444211 1100112222233   245666778


Q ss_pred             CCCEEEEcccc
Q 025660           82 GCTGVLHVATP   92 (249)
Q Consensus        82 ~~d~vih~a~~   92 (249)
                      ++|+|||+-..
T Consensus       194 ~~DiVInaTp~  204 (283)
T 3jyo_A          194 AADGVVNATPM  204 (283)
T ss_dssp             HSSEEEECSST
T ss_pred             cCCEEEECCCC
Confidence            89999988654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.50  E-value=7.3e-05  Score=60.92  Aligned_cols=38  Identities=24%  Similarity=0.375  Sum_probs=29.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRS   38 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~   38 (249)
                      |..++++|.|+|++|.+|+.+++.+.+. ++++++....
T Consensus         1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A            1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            5555679999999999999999998854 7888755443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.48  E-value=0.00014  Score=62.07  Aligned_cols=75  Identities=19%  Similarity=0.088  Sum_probs=56.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|+|+|+ |.||+.+++.+...|.+|++++|+.        ++.+.+.+...  ..+   ..+..+.+++.+++.++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~--------~~l~~~~~~~g--~~~---~~~~~~~~~l~~~l~~a  232 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINI--------DKLRQLDAEFC--GRI---HTRYSSAYELEGAVKRA  232 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHTT--TSS---EEEECCHHHHHHHHHHC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHhcC--Cee---EeccCCHHHHHHHHcCC
Confidence            4579999997 9999999999999999999999987        55544433111  111   12334566788888899


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+||++++.
T Consensus       233 DvVi~~~~~  241 (377)
T 2vhw_A          233 DLVIGAVLV  241 (377)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999998875

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.48  E-value=7.2e-05  Score=62.65  Aligned_cols=109  Identities=12%  Similarity=0.031  Sum_probs=69.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhh----hccC---CCCCCCeEEEEcCCCChhhH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSF----LKNL---PGASERLRIFHADLSHPDGF   76 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~----l~~~---~~~~~~~~~~~~Dl~~~~~~   76 (249)
                      +++|.|+|| |.+|..++..|...|+ +|+++++++        ++.+.    +...   .....++.. ..|      +
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~--------~~l~~~~~~l~~~~~~~~~~~~i~~-t~d------~   77 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIE--------GVPQGKALDLNHCMALIGSPAKIFG-ENN------Y   77 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSST--------THHHHHHHHHHHHHHHHTCCCCEEE-ESC------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCH--------HHHHHHHHHHHhHhhccCCCCEEEE-CCC------H
Confidence            358999997 9999999999999998 999999987        33221    1110   001112222 123      2


Q ss_pred             HHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEE
Q 025660           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (249)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~  131 (249)
                       +.++++|+||-+++.......... +....|+.-.+.+++.+.+..+...++..
T Consensus        78 -~al~~aD~VI~avg~p~k~g~tr~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~  130 (328)
T 2hjr_A           78 -EYLQNSDVVIITAGVPRKPNMTRS-DLLTVNAKIVGSVAENVGKYCPNAFVICI  130 (328)
T ss_dssp             -GGGTTCSEEEECCSCCCCTTCCSG-GGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             -HHHCCCCEEEEcCCCCCCCCCchh-hHHhhhHHHHHHHHHHHHHHCCCeEEEEe
Confidence             346799999999875332111112 56677888888888888876523344444

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.47  E-value=0.0002  Score=60.70  Aligned_cols=98  Identities=15%  Similarity=0.088  Sum_probs=64.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+++|||+||+|.||..+++.+...|++|+++++++        ++.+.+.++..   . .++  |..+.+   .+.+..
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~--------~~~~~~~~~Ga---~-~~~--~~~~~~~~~~~~~~~  228 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD--------EKSAFLKSLGC---D-RPI--NYKTEPVGTVLKQEY  228 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---S-EEE--ETTTSCHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHcCC---c-EEE--ecCChhHHHHHHHhc
Confidence            357899999999999999999999999999999987        56555554421   1 222  333322   222222


Q ss_pred             -cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           81 -AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        81 -~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                       .++|+||+++|.          .       .....++.++..   ++++.+++..
T Consensus       229 ~~g~D~vid~~g~----------~-------~~~~~~~~l~~~---G~iv~~g~~~  264 (362)
T 2c0c_A          229 PEGVDVVYESVGG----------A-------MFDLAVDALATK---GRLIVIGFIS  264 (362)
T ss_dssp             TTCEEEEEECSCT----------H-------HHHHHHHHEEEE---EEEEECCCGG
T ss_pred             CCCCCEEEECCCH----------H-------HHHHHHHHHhcC---CEEEEEeCCC
Confidence             258999999883          1       112344455443   5899888753

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.47  E-value=0.0013  Score=54.45  Aligned_cols=113  Identities=13%  Similarity=0.143  Sum_probs=71.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhh--hh--ccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS--FL--KNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~--~l--~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++++|.|+|+ |.+|..++..|...|+  +|++++|+.        ++.+  .+  ...........+...  ++.+   
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~---   71 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAK--------ERVEAEVLDMQHGSSFYPTVSIDGS--DDPE---   71 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH--------HHHHHHHHHHHHTGGGSTTCEEEEE--SCGG---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh--------hHHHHHHHHHHhhhhhcCCeEEEeC--CCHH---
Confidence            3468999997 9999999999999999  999999976        3322  11  111000011222221  1222   


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                       .++++|+||-+++.......+.. .....|+...+.+++.+.+.. ...+|...+
T Consensus        72 -~~~~aD~Vii~v~~~~~~g~~r~-~~~~~n~~~~~~~~~~i~~~~-~~~~vi~~~  124 (319)
T 1lld_A           72 -ICRDADMVVITAGPRQKPGQSRL-ELVGATVNILKAIMPNLVKVA-PNAIYMLIT  124 (319)
T ss_dssp             -GGTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             -HhCCCCEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhC-CCceEEEec
Confidence             35689999999975433222333 677888888888888887765 344444444

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.46  E-value=0.0002  Score=58.97  Aligned_cols=74  Identities=16%  Similarity=0.119  Sum_probs=52.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+.+|||+||+|.+|..+++.+...|++|+++++++        ++.+.+.++..   . .  ..|..+.+++.+.+.++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~ga---~-~--~~~~~~~~~~~~~~~~~  190 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP--------EKLALPLALGA---E-E--AATYAEVPERAKAWGGL  190 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG--------GGSHHHHHTTC---S-E--EEEGGGHHHHHHHTTSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHhcCC---C-E--EEECCcchhHHHHhcCc
Confidence            457899999999999999999988999999999987        55554444321   1 1  23444413344444789


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|++ +|.
T Consensus       191 d~vid-~g~  198 (302)
T 1iz0_A          191 DLVLE-VRG  198 (302)
T ss_dssp             EEEEE-CSC
T ss_pred             eEEEE-CCH
Confidence            99999 774

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.45  E-value=0.00021  Score=62.43  Aligned_cols=78  Identities=12%  Similarity=0.142  Sum_probs=51.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeE-EE-----EcCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLR-IF-----HADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~-~~-----~~Dl~~~~~~~   77 (249)
                      |+|.|+| +|++|..++..|.+.|++|++++|++        ++.+.+.+-...  ...+. .+     .+.++-..++.
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~--------~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~   73 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDR--------NKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIE   73 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCH--------HHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHH
Confidence            5899998 69999999999999999999999987        665555431100  00000 00     01122223466


Q ss_pred             HHHcCCCEEEEcccc
Q 025660           78 AAIAGCTGVLHVATP   92 (249)
Q Consensus        78 ~~~~~~d~vih~a~~   92 (249)
                      ++++++|+||-+...
T Consensus        74 ea~~~aDvViiaVpt   88 (450)
T 3gg2_A           74 QAVPEADIIFIAVGT   88 (450)
T ss_dssp             HHGGGCSEEEECCCC
T ss_pred             HHHhcCCEEEEEcCC
Confidence            678889999988764

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.43  E-value=0.0016  Score=53.46  Aligned_cols=111  Identities=14%  Similarity=0.067  Sum_probs=73.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhh----hhccC-CCCCCCeEEEE-cCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLS----FLKNL-PGASERLRIFH-ADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~----~l~~~-~~~~~~~~~~~-~Dl~~~~~~~   77 (249)
                      |||.|+|| |.||+.++..|..++  .++.+++..+        ++.+    .|... ........+.. .|.   +   
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~--------~~~~G~a~DL~h~~~~~~~~~~i~~~~d~---~---   65 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAE--------DLAVGEAMDLAHAAAGIDKYPKIVGGADY---S---   65 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSH--------HHHHHHHHHHHHHHGGGTCCCEEEEESCG---G---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCC--------CcchhhhhhhhcccccCCCCCeEecCCCH---H---
Confidence            47999995 999999999998887  4899999875        2222    12111 00111222222 232   2   


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                       .++++|+||-+||..... .....+.+..|..-.+.+.+.+.+.. ...++.+-|.
T Consensus        66 -~~~~aDvVvitAG~prkp-GmtR~dLl~~Na~I~~~i~~~i~~~~-p~aivlvvsN  119 (294)
T 2x0j_A           66 -LLKGSEIIVVTAGLARKP-GMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTN  119 (294)
T ss_dssp             -GGTTCSEEEECCCCCCCS-SSCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSS
T ss_pred             -HhCCCCEEEEecCCCCCC-CCchHHHHHHHHHHHHHHHHHHHhcC-CceEEEEecC
Confidence             367999999999975442 22334889999999999999999987 4455555443

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.43  E-value=0.00035  Score=58.77  Aligned_cols=96  Identities=16%  Similarity=0.064  Sum_probs=62.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      +.+|||+|| |.+|..+++.+...|+ +|+++++++        ++.+.+.++..    ..+  .|..+.+   .+.++.
T Consensus       168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~--------~~~~~~~~~Ga----~~~--~~~~~~~~~~~v~~~~  232 (348)
T 2d8a_A          168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSD--------FRRELAKKVGA----DYV--INPFEEDVVKEVMDIT  232 (348)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH--------HHHHHHHHHTC----SEE--ECTTTSCHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH--------HHHHHHHHhCC----CEE--ECCCCcCHHHHHHHHc
Confidence            568999999 9999999999988999 999999887        55555544321    122  3444433   333333


Q ss_pred             c--CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           81 A--GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        81 ~--~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      .  ++|+||++++..                ......++.++..   ++++.+++.
T Consensus       233 ~g~g~D~vid~~g~~----------------~~~~~~~~~l~~~---G~iv~~g~~  269 (348)
T 2d8a_A          233 DGNGVDVFLEFSGAP----------------KALEQGLQAVTPA---GRVSLLGLY  269 (348)
T ss_dssp             TTSCEEEEEECSCCH----------------HHHHHHHHHEEEE---EEEEECCCC
T ss_pred             CCCCCCEEEECCCCH----------------HHHHHHHHHHhcC---CEEEEEccC
Confidence            2  589999998841                1122344444443   588888864

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.41  E-value=0.0012  Score=55.01  Aligned_cols=109  Identities=15%  Similarity=0.081  Sum_probs=70.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhc----cCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLK----NLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+|.|+|+ |.+|..++..|...|+  +|+++++++        ++.+.+.    ..........+..   ++.+    .
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~--------~~~~~~~~~l~~~~~~~~~~~i~~---~d~~----~   64 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDK--------KRAEGDALDLIHGTPFTRRANIYA---GDYA----D   64 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHHHGGGSCCCEEEE---CCGG----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCCh--------HHHHHHHHHHHhhhhhcCCcEEEe---CCHH----H
Confidence            37999997 9999999999999999  999999986        3333221    0000001122222   2333    3


Q ss_pred             HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEE
Q 025660           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~  131 (249)
                      ++++|+||-+++.......... +....|+...+.+++.+.+..+...+|.+
T Consensus        65 ~~~aDvViiav~~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~~~~~ii~~  115 (319)
T 1a5z_A           65 LKGSDVVIVAAGVPQKPGETRL-QLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (319)
T ss_dssp             GTTCSEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             hCCCCEEEEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence            6789999999886443111233 67788888888999988876523344444

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.40  E-value=0.00065  Score=56.25  Aligned_cols=107  Identities=13%  Similarity=0.055  Sum_probs=68.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhcc-C----CCCCCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKN-L----PGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~-~----~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      ++|.|+| +|.+|..++..|.+.|  ++|++++|+.        ++.+.+.. +    ......+.....|   .    +
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~   65 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANE--------AKVKADQIDFQDAMANLEAHGNIVIND---W----A   65 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHHHGGGSSSCCEEEESC---G----G
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCH--------HHHHHHHHHHHhhhhhcCCCeEEEeCC---H----H
Confidence            5899999 7999999999999999  8999999986        43333211 0    0011123333333   2    2


Q ss_pred             HHcCCCEEEEccccCC-----CCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEE
Q 025660           79 AIAGCTGVLHVATPVD-----FEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVY  130 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~-----~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~  130 (249)
                      .++++|+||-+++...     ... .. ......|+...+.+++.+.+..+...++.
T Consensus        66 ~~~~aDvViiav~~~~~~~~~~g~-~r-~~l~~~n~~i~~~i~~~i~~~~~~~~ii~  120 (309)
T 1hyh_A           66 ALADADVVISTLGNIKLQQDNPTG-DR-FAELKFTSSMVQSVGTNLKESGFHGVLVV  120 (309)
T ss_dssp             GGTTCSEEEECCSCGGGTC---------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             HhCCCCEEEEecCCcccCCCCCCC-CH-HHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence            4678999999887633     211 11 25677888888888888877652334444

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.38  E-value=0.00086  Score=55.41  Aligned_cols=25  Identities=24%  Similarity=0.228  Sum_probs=23.2

Q ss_pred             hhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660           15 GFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus        15 G~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |-.|.+++++++++|++|+.+.+..
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCC
Confidence            7899999999999999999999864

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.37  E-value=0.00066  Score=57.85  Aligned_cols=69  Identities=13%  Similarity=0.162  Sum_probs=53.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|+|+| +|.+|+.+++.+.+.|++|++++.++.       .....+        .-..+..|..|.+.+.++++.+
T Consensus        11 ~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~-------~p~~~~--------ad~~~~~~~~d~~~l~~~~~~~   74 (377)
T 3orq_A           11 FGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSED-------CPCRYV--------AHEFIQAKYDDEKALNQLGQKC   74 (377)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTT-------CTTGGG--------SSEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCC-------Chhhhh--------CCEEEECCCCCHHHHHHHHHhC
Confidence            457999998 677999999999999999999987651       111111        1246779999999999999989


Q ss_pred             CEEEE
Q 025660           84 TGVLH   88 (249)
Q Consensus        84 d~vih   88 (249)
                      |+|+-
T Consensus        75 dvi~~   79 (377)
T 3orq_A           75 DVITY   79 (377)
T ss_dssp             SEEEE
T ss_pred             Cccee
Confidence            98743

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.36  E-value=0.00073  Score=58.85  Aligned_cols=45  Identities=20%  Similarity=0.202  Sum_probs=38.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL   56 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~   56 (249)
                      .+++|||+||+|.||..+++.+...|.+|+++++++        ++.+.+.++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~--------~~~~~~~~l  264 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA--------QKEAAVRAL  264 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhc
Confidence            357899999999999999999999999999999876        666666554

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.34  E-value=0.00018  Score=58.66  Aligned_cols=69  Identities=7%  Similarity=0.070  Sum_probs=50.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++++|+|+ |.+|++++..|.+.|. +|++.+|+.        ++.+.+..      .+...     ..+++.+.+++
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~--------~~a~~la~------~~~~~-----~~~~~~~~~~~  175 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTM--------SRFNNWSL------NINKI-----NLSHAESHLDE  175 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCG--------GGGTTCCS------CCEEE-----CHHHHHHTGGG
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHH------hcccc-----cHhhHHHHhcC
Confidence            3578999996 7899999999999998 899999987        44444432      11211     24556666778


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||++-..
T Consensus       176 aDiVInaTp~  185 (277)
T 3don_A          176 FDIIINTTPA  185 (277)
T ss_dssp             CSEEEECCC-
T ss_pred             CCEEEECccC
Confidence            9999988653

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.34  E-value=0.0015  Score=52.41  Aligned_cols=84  Identities=18%  Similarity=0.115  Sum_probs=53.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcc---------------cCCchhhhhhccCCCCCCCeEEEEc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE---------------HRNSKDLSFLKNLPGASERLRIFHA   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---------------~~~~~~~~~l~~~~~~~~~~~~~~~   68 (249)
                      .++|+|.| .|.+|+++++.|...|. ++++++++.-+..               .+.....+.+.++. ...++..+..
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~~v~~~~~  108 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN-PHIAITPVNA  108 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEEEECS
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC-CCcEEEEEec
Confidence            36899999 57799999999999996 8999988751100               00111111222221 1124556666


Q ss_pred             CCCChhhHHHHHcCCCEEEEccc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVAT   91 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a~   91 (249)
                      +++ .+.+.++++++|+||.+..
T Consensus       109 ~~~-~~~~~~~~~~~DvVi~~~d  130 (249)
T 1jw9_B          109 LLD-DAELAALIAEHDLVLDCTD  130 (249)
T ss_dssp             CCC-HHHHHHHHHTSSEEEECCS
T ss_pred             cCC-HhHHHHHHhCCCEEEEeCC
Confidence            665 3567778889999997753

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.32  E-value=0.00064  Score=57.65  Aligned_cols=74  Identities=14%  Similarity=0.091  Sum_probs=55.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+.+|||+|+ |.||..+++.+...|.+|+++++++        ++.+.+. ++..   . .  ..|..+.+.+.++..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~--------~~~~~~~~~lGa---~-~--v~~~~~~~~~~~~~~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSP--------SKKEEALKNFGA---D-S--FLVSRDQEQMQAAAGT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCG--------GGHHHHHHTSCC---S-E--EEETTCHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhcCC---c-e--EEeccCHHHHHHhhCC
Confidence            4578999996 8999999999988999999999887        5554433 3321   1 2  2356666667766668


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||+++|.
T Consensus       252 ~D~vid~~g~  261 (366)
T 1yqd_A          252 LDGIIDTVSA  261 (366)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCc
Confidence            9999999985

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.31  E-value=0.00017  Score=59.55  Aligned_cols=34  Identities=24%  Similarity=0.272  Sum_probs=30.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ||+|.|+| .|.+|+.++..|.+.|++|++++|++
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~   36 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWP   36 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCH
Confidence            46899999 59999999999999999999999986

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.31  E-value=3.8e-05  Score=63.11  Aligned_cols=77  Identities=10%  Similarity=0.076  Sum_probs=49.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC-C-CCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA-S-ERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+++++|||++ .+|+++++.|++.| +|++++|+.        ++.+.+.+.... . ... .+.+|+.+.   .+.+.
T Consensus       127 ~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~--------~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~  192 (287)
T 1nvt_A          127 KDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTV--------EKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLD  192 (287)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSH--------HHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCT
T ss_pred             CCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCH--------HHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhC
Confidence            45789999986 89999999999999 999999986        444433211000 0 000 011233221   23345


Q ss_pred             CCCEEEEccccCC
Q 025660           82 GCTGVLHVATPVD   94 (249)
Q Consensus        82 ~~d~vih~a~~~~   94 (249)
                      ++|+|||+++...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            7999999998643

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.31  E-value=0.00015  Score=57.07  Aligned_cols=35  Identities=20%  Similarity=0.206  Sum_probs=31.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEE-EEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTT-TVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~   39 (249)
                      +|++|.|+| +|.+|.++++.|.+.|++|++ .+|++
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~   57 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGP   57 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence            457899999 899999999999999999998 88876

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.31  E-value=0.00021  Score=58.85  Aligned_cols=34  Identities=15%  Similarity=0.060  Sum_probs=31.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +++|.|+| .|.+|..+++.|.+.|++|++++|++
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~   48 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRI   48 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            46899998 79999999999999999999999988

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.30  E-value=9.3e-05  Score=65.93  Aligned_cols=72  Identities=17%  Similarity=0.128  Sum_probs=45.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++++|||| |++|++++..|.+.|++|++++|+.        ++.+.+.+...  ..+  +.  +.+.+.+  ....+|
T Consensus       364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~--------~~a~~la~~~~--~~~--~~--~~dl~~~--~~~~~D  426 (523)
T 2o7s_A          364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTY--------ERALELAEAIG--GKA--LS--LTDLDNY--HPEDGM  426 (523)
T ss_dssp             --CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSH--------HHHHHHHHHTT--C-C--EE--TTTTTTC----CCSE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHcC--Cce--ee--HHHhhhc--cccCce
Confidence            468999998 6999999999999999999999986        55444432211  111  11  1121111  123589


Q ss_pred             EEEEccccC
Q 025660           85 GVLHVATPV   93 (249)
Q Consensus        85 ~vih~a~~~   93 (249)
                      ++||+++..
T Consensus       427 ilVN~agvg  435 (523)
T 2o7s_A          427 VLANTTSMG  435 (523)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECCCCC
Confidence            999999863

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.29  E-value=0.00067  Score=55.87  Aligned_cols=36  Identities=19%  Similarity=0.411  Sum_probs=32.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++++|.|+||.|.+|.+++..|.+.|++|++++|+.
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            346899999999999999999999999999999876

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.27  E-value=0.00033  Score=56.99  Aligned_cols=74  Identities=12%  Similarity=0.113  Sum_probs=49.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++++|+|+ |.+|++++..|++.|++|++++|+.        ++.+.+.+.......+..  .|+   +++.+  .++
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~--------~~a~~l~~~~~~~~~~~~--~~~---~~~~~--~~~  181 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF--------SKTKELAERFQPYGNIQA--VSM---DSIPL--QTY  181 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH--------HHHHHHHHHHGGGSCEEE--EEG---GGCCC--SCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHccccCCeEE--eeH---HHhcc--CCC
Confidence            4578999997 7799999999999999999999987        555444321110012222  222   11110  379


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+||++.+..
T Consensus       182 DivIn~t~~~  191 (272)
T 1p77_A          182 DLVINATSAG  191 (272)
T ss_dssp             SEEEECCCC-
T ss_pred             CEEEECCCCC
Confidence            9999998864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.26  E-value=0.0011  Score=55.53  Aligned_cols=72  Identities=18%  Similarity=0.177  Sum_probs=50.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      +.+|||+|| |.+|..+++.+...|. +|+++++++        ++.+.+.++ .    ..  ..|..+.+   .+.++.
T Consensus       165 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~--------~~~~~~~~l-a----~~--v~~~~~~~~~~~~~~~~  228 (343)
T 2dq4_A          165 GKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNP--------YRLAFARPY-A----DR--LVNPLEEDLLEVVRRVT  228 (343)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH--------HHHGGGTTT-C----SE--EECTTTSCHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH--------HHHHHHHHh-H----Hh--ccCcCccCHHHHHHHhc
Confidence            468999999 9999999998888899 999999887        555555443 2    11  23444432   233322


Q ss_pred             -cCCCEEEEcccc
Q 025660           81 -AGCTGVLHVATP   92 (249)
Q Consensus        81 -~~~d~vih~a~~   92 (249)
                       .++|+||+++|.
T Consensus       229 ~~g~D~vid~~g~  241 (343)
T 2dq4_A          229 GSGVEVLLEFSGN  241 (343)
T ss_dssp             SSCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence             258999999884

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.25  E-value=0.00041  Score=58.32  Aligned_cols=73  Identities=22%  Similarity=0.214  Sum_probs=50.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC-hhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-PDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~-   81 (249)
                      .+.+|||+||+|.||..+++.+...|.+|+++ +++        ++.+.+.++.     ...+. +-.+ .+.+.+... 
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~--------~~~~~~~~lG-----a~~i~-~~~~~~~~~~~~~~~  214 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARG--------SDLEYVRDLG-----ATPID-ASREPEDYAAEHTAG  214 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECH--------HHHHHHHHHT-----SEEEE-TTSCHHHHHHHHHTT
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCH--------HHHHHHHHcC-----CCEec-cCCCHHHHHHHHhcC
Confidence            35789999999999999999999999999998 665        5555554442     22222 2222 233334333 


Q ss_pred             -CCCEEEEccc
Q 025660           82 -GCTGVLHVAT   91 (249)
Q Consensus        82 -~~d~vih~a~   91 (249)
                       ++|+|++++|
T Consensus       215 ~g~D~vid~~g  225 (343)
T 3gaz_A          215 QGFDLVYDTLG  225 (343)
T ss_dssp             SCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence             5899999988

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.24  E-value=0.00031  Score=59.51  Aligned_cols=34  Identities=21%  Similarity=0.320  Sum_probs=28.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (249)
                      ++|.|.||+|.+|+.+++.|.++.. +++++.+..
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~   51 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR   51 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch
Confidence            5899999999999999999998764 887776543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.24  E-value=0.00062  Score=56.38  Aligned_cols=35  Identities=29%  Similarity=0.358  Sum_probs=32.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++++|.|+| .|.+|..+++.|.+.|++|++++|++
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~   54 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTL   54 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            457899998 79999999999999999999999987

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.23  E-value=0.0034  Score=52.74  Aligned_cols=74  Identities=19%  Similarity=0.084  Sum_probs=52.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC----hhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH----PDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~----~~~~~~~   79 (249)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++        ++.+.+.++..   . ..+  |.++    .+.+.+.
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~--------~~~~~~~~lGa---~-~~~--~~~~~~~~~~~i~~~  232 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSP--------RRLEVAKNCGA---D-VTL--VVDPAKEEESSIIER  232 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTTC---S-EEE--ECCTTTSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCH--------HHHHHHHHhCC---C-EEE--cCcccccHHHHHHHH
Confidence            3578999997 8999999998888899999998887        56665554422   1 222  3332    3455555


Q ss_pred             Hc-----CCCEEEEcccc
Q 025660           80 IA-----GCTGVLHVATP   92 (249)
Q Consensus        80 ~~-----~~d~vih~a~~   92 (249)
                      ..     ++|+|++++|.
T Consensus       233 ~~~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          233 IRSAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHHHSSSCCSEEEECSCC
T ss_pred             hccccCCCCCEEEECCCC
Confidence            43     59999999884

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.20  E-value=0.00022  Score=58.96  Aligned_cols=35  Identities=17%  Similarity=0.037  Sum_probs=31.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++++|.|+| .|.+|+.+++.|.+.|++|++++|++
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~   40 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNP   40 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCH
Confidence            456899998 79999999999999999999999987

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.18  E-value=0.0031  Score=53.24  Aligned_cols=77  Identities=16%  Similarity=0.101  Sum_probs=54.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCe-EEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI--   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~--   80 (249)
                      .+.+|||+|| |.+|...++-+...|.+ |+++++++        ++.+.+.++ .  ..+..+..|-.+.+++.+.+  
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~--------~~~~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~  246 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDE--------GRLKFAKEI-C--PEVVTHKVERLSAEESAKKIVE  246 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCH--------HHHHHHHHH-C--TTCEEEECCSCCHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH--------HHHHHHHHh-c--hhcccccccccchHHHHHHHHH
Confidence            4578999998 99999999888888987 88888887        666655554 2  13344455544444444333  


Q ss_pred             --c--CCCEEEEcccc
Q 025660           81 --A--GCTGVLHVATP   92 (249)
Q Consensus        81 --~--~~d~vih~a~~   92 (249)
                        .  ++|+|+.+.|.
T Consensus       247 ~t~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          247 SFGGIEPAVALECTGV  262 (363)
T ss_dssp             HTSSCCCSEEEECSCC
T ss_pred             HhCCCCCCEEEECCCC
Confidence              2  58999999884

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.17  E-value=0.0015  Score=55.56  Aligned_cols=74  Identities=14%  Similarity=0.134  Sum_probs=50.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH--c
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI--A   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~   81 (249)
                      .+.+|||+||+|.||..+++.+...|.+|+++++ +        ++.+.+.++..   . ..  .|..+.+..+++.  .
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~--------~~~~~~~~lGa---~-~v--~~~~~~~~~~~~~~~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-Q--------DASELVRKLGA---D-DV--IDYKSGSVEEQLKSLK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-G--------GGHHHHHHTTC---S-EE--EETTSSCHHHHHHTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-h--------HHHHHHHHcCC---C-EE--EECCchHHHHHHhhcC
Confidence            3578999999999999999988888999988873 3        34444444321   1 22  3444443333333  3


Q ss_pred             CCCEEEEcccc
Q 025660           82 GCTGVLHVATP   92 (249)
Q Consensus        82 ~~d~vih~a~~   92 (249)
                      ++|+||+++|.
T Consensus       248 g~D~vid~~g~  258 (375)
T 2vn8_A          248 PFDFILDNVGG  258 (375)
T ss_dssp             CBSEEEESSCT
T ss_pred             CCCEEEECCCC
Confidence            68999999984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.17  E-value=0.00012  Score=59.90  Aligned_cols=37  Identities=32%  Similarity=0.438  Sum_probs=32.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+ ++++|.|+| +|.+|+.++..|.+.|++|++++|++
T Consensus         1 Mm-~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~   37 (283)
T 4e12_A            1 MT-GITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINT   37 (283)
T ss_dssp             CC-SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CC-CCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            54 356899998 59999999999999999999999987

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.16  E-value=0.00057  Score=57.84  Aligned_cols=35  Identities=14%  Similarity=0.128  Sum_probs=31.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++++|.|+| .|.+|..+++.|.+.|++|++++|++
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~   55 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNV   55 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            457899998 89999999999999999999999987

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.15  E-value=0.00053  Score=56.10  Aligned_cols=33  Identities=30%  Similarity=0.350  Sum_probs=31.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++|.|+| .|.+|+.+++.|.+.|++|++++|++
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~   34 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSP   34 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            5899998 79999999999999999999999987

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.14  E-value=0.0014  Score=56.72  Aligned_cols=68  Identities=13%  Similarity=0.149  Sum_probs=53.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|+|.| +|.+|+.+++.+.+.|++|++++.++.       .....+.        -..+..|..|.+.+.++++++
T Consensus        34 ~~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~-------~p~~~~a--------d~~~~~~~~d~~~l~~~a~~~   97 (419)
T 4e4t_A           34 PGAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPA-------SPAGAVA--------DRHLRAAYDDEAALAELAGLC   97 (419)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTT-------CHHHHHS--------SEEECCCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCc-------CchhhhC--------CEEEECCcCCHHHHHHHHhcC
Confidence            457899998 678999999999999999999976651       1111111        245678999999999999889


Q ss_pred             CEEE
Q 025660           84 TGVL   87 (249)
Q Consensus        84 d~vi   87 (249)
                      |+|+
T Consensus        98 D~V~  101 (419)
T 4e4t_A           98 EAVS  101 (419)
T ss_dssp             SEEE
T ss_pred             CEEE
Confidence            9988

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.14  E-value=0.00085  Score=56.45  Aligned_cols=78  Identities=15%  Similarity=0.046  Sum_probs=49.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEE------EcCCC-Ch
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF------HADLS-HP   73 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~~Dl~-~~   73 (249)
                      |+ ++++|.|+| +|.+|+.++..|.+.|++|++++|++        ++.+.+.+..    .+.+.      ...+. ..
T Consensus         1 mm-~~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~--------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~   66 (359)
T 1bg6_A            1 MI-ESKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDA--------QRIKEIQDRG----AIIAEGPGLAGTAHPDLLT   66 (359)
T ss_dssp             ----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHT----SEEEESSSCCEEECCSEEE
T ss_pred             CC-CcCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHhcC----CeEEeccccccccccceec
Confidence            44 346899999 59999999999999999999999986        4444443210    01110      01111 12


Q ss_pred             hhHHHHHcCCCEEEEcccc
Q 025660           74 DGFDAAIAGCTGVLHVATP   92 (249)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~   92 (249)
                      .++.++++++|+||-+...
T Consensus        67 ~~~~~~~~~~D~vi~~v~~   85 (359)
T 1bg6_A           67 SDIGLAVKDADVILIVVPA   85 (359)
T ss_dssp             SCHHHHHTTCSEEEECSCG
T ss_pred             CCHHHHHhcCCEEEEeCCc
Confidence            3455667789999987754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.13  E-value=0.0008  Score=54.69  Aligned_cols=72  Identities=19%  Similarity=0.203  Sum_probs=49.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++++|+|+ |.+|++++..|.+.|. +|++++|+.        ++.+.+.+.... ..+..+  ++.+.+   .  .+
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~--------~~a~~la~~~~~-~~~~~~--~~~~l~---~--~~  181 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDM--------AKALALRNELDH-SRLRIS--RYEALE---G--QS  181 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCH--------HHHHHHHHHHCC-TTEEEE--CSGGGT---T--CC
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHHhcc-CCeeEe--eHHHhc---c--cC
Confidence            4679999996 7899999999999995 999999987        555554322111 123333  222221   1  57


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||++-..
T Consensus       182 ~DivInaTp~  191 (272)
T 3pwz_A          182 FDIVVNATSA  191 (272)
T ss_dssp             CSEEEECSSG
T ss_pred             CCEEEECCCC
Confidence            9999988654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.12  E-value=0.00075  Score=57.29  Aligned_cols=75  Identities=12%  Similarity=0.065  Sum_probs=54.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCC-------------
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL-------------   70 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl-------------   70 (249)
                      .+.+|+|+|+ |-+|..+++.+...|.+|++++|++        ++.+.+.++     +..++..|.             
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~--------~~l~~~~~l-----Ga~~~~l~~~~~~~~gya~~~~  248 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRP--------EVAEQVRSV-----GAQWLDLGIDAAGEGGYARELS  248 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSG--------GGHHHHHHT-----TCEECCCC-------------C
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHc-----CCeEEeccccccccccchhhhh
Confidence            3578999995 8999999999999999999999998        555555543     122222211             


Q ss_pred             -----CChhhHHHHHcCCCEEEEcccc
Q 025660           71 -----SHPDGFDAAIAGCTGVLHVATP   92 (249)
Q Consensus        71 -----~~~~~~~~~~~~~d~vih~a~~   92 (249)
                           .+.+.+.+.++++|+||.++..
T Consensus       249 ~~~~~~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          249 EAERAQQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred             HHHHhhhHHHHHHHHhcCCEEEECCCC
Confidence                 1235678888899999988754

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.12  E-value=0.0014  Score=53.98  Aligned_cols=70  Identities=19%  Similarity=0.236  Sum_probs=52.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++++|+| .|.+|+++++.|...|.+|++.+|+.        ++.+.+.+.     ....+     +.+++.++++++
T Consensus       156 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~--------~~~~~~~~~-----g~~~~-----~~~~l~~~l~~a  216 (300)
T 2rir_A          156 HGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSS--------AHLARITEM-----GLVPF-----HTDELKEHVKDI  216 (300)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHT-----TCEEE-----EGGGHHHHSTTC
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHC-----CCeEE-----chhhHHHHhhCC
Confidence            468999999 58999999999999999999999987        444433322     12222     235677888899


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|+.+...
T Consensus       217 DvVi~~~p~  225 (300)
T 2rir_A          217 DICINTIPS  225 (300)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEECCCh
Confidence            999988775

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.11  E-value=0.00073  Score=56.25  Aligned_cols=66  Identities=20%  Similarity=0.204  Sum_probs=48.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++|.|+| .|.+|+.+++.|.+.|++|++++|++        ++.+.+.+.     ++.       -..+..++++++|
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~--------~~~~~l~~~-----g~~-------~~~~~~e~~~~aD   89 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTP--------ARAASLAAL-----GAT-------IHEQARAAARDAD   89 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHTT-----TCE-------EESSHHHHHTTCS
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCH--------HHHHHHHHC-----CCE-------eeCCHHHHHhcCC
Confidence            46899998 79999999999999999999999987        555555433     111       1234556677788


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      +||-+..
T Consensus        90 vVi~~vp   96 (320)
T 4dll_A           90 IVVSMLE   96 (320)
T ss_dssp             EEEECCS
T ss_pred             EEEEECC
Confidence            7776553

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.10  E-value=0.0032  Score=53.70  Aligned_cols=69  Identities=12%  Similarity=0.081  Sum_probs=52.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|+|+| +|.+|+.+++.+.+.|++|++++.++.        .       +...-.-..+..|..|.+.+.++++.+
T Consensus        13 ~~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~~~~--------~-------~~~~~ad~~~~~~~~d~~~l~~~~~~~   76 (389)
T 3q2o_A           13 PGKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDPTKN--------S-------PCAQVADIEIVASYDDLKAIQHLAEIS   76 (389)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTT--------C-------TTTTTCSEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCC--------C-------chHHhCCceEecCcCCHHHHHHHHHhC
Confidence            457899998 667999999999999999999987651        0       000011245668999999999999999


Q ss_pred             CEEEE
Q 025660           84 TGVLH   88 (249)
Q Consensus        84 d~vih   88 (249)
                      |+|..
T Consensus        77 dvI~~   81 (389)
T 3q2o_A           77 DVVTY   81 (389)
T ss_dssp             SEEEE
T ss_pred             CEeee
Confidence            98743

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.0019  Score=55.32  Aligned_cols=75  Identities=17%  Similarity=0.100  Sum_probs=54.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEc----------------
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA----------------   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------------   68 (249)
                      ..+|+|+|+ |-+|...++.+...|.+|+++++++        .+.+.+.++.     ..++..                
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~--------~~l~~~~~~G-----~~~~~~~~~~~~d~~~~~~ya~  255 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRP--------AAKEQVASLG-----AKFIAVEDEEFKAAETAGGYAK  255 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSST--------THHHHHHHTT-----CEECCCCC--------------
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHcC-----Cceeecccccccccccccchhh
Confidence            468999996 8999999999999999999999998        5555554431     122221                


Q ss_pred             CCCCh------hhHHHHHcCCCEEEEccccC
Q 025660           69 DLSHP------DGFDAAIAGCTGVLHVATPV   93 (249)
Q Consensus        69 Dl~~~------~~~~~~~~~~d~vih~a~~~   93 (249)
                      .++++      +.+.++++++|+||.++...
T Consensus       256 e~s~~~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          256 EMSGEYQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             ---CHHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hcchhhhhhhHhHHHHHhcCCCEEEECCcCC
Confidence            13333      47888899999999987653

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.09  E-value=0.0023  Score=54.07  Aligned_cols=33  Identities=30%  Similarity=0.422  Sum_probs=28.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRS   38 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (249)
                      ++|.|.||+|.+|+.+++.|.+++ .+|+++.++
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            589999999999999999998775 588888654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.08  E-value=0.00068  Score=55.38  Aligned_cols=72  Identities=18%  Similarity=0.160  Sum_probs=48.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++++|+|+ |.+|++++..|.+.|. +|++++|+.        ++.+.+.+.......+.....  .+      +..+
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~--------~~a~~la~~~~~~~~~~~~~~--~~------l~~~  187 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTF--------AKAEQLAELVAAYGEVKAQAF--EQ------LKQS  187 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSH--------HHHHHHHHHHGGGSCEEEEEG--GG------CCSC
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCH--------HHHHHHHHHhhccCCeeEeeH--HH------hcCC
Confidence            4679999997 7899999999999996 999999987        554444321111012333322  11      1157


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||++-..
T Consensus       188 aDiIInaTp~  197 (281)
T 3o8q_A          188 YDVIINSTSA  197 (281)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEEcCcC
Confidence            8999988654

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.07  E-value=0.00036  Score=57.12  Aligned_cols=33  Identities=21%  Similarity=0.300  Sum_probs=31.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++|.|+| .|.+|+.+++.|.+.|++|++++|++
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~   34 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNP   34 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            4799998 89999999999999999999999987

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.07  E-value=0.0022  Score=54.06  Aligned_cols=33  Identities=21%  Similarity=0.356  Sum_probs=27.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTV   36 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~   36 (249)
                      ++.+|.|.||+|.+|+.+++.|.+.. .+++++.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            45689999999999999999988765 4787775

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.06  E-value=0.00089  Score=53.82  Aligned_cols=65  Identities=23%  Similarity=0.317  Sum_probs=49.6

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      +++|+|+ |..|++++..|.+.|. +|++.+|+.        ++.+.+.+.      +...     ..+++.+.++++|+
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~--------~ka~~la~~------~~~~-----~~~~~~~~~~~aDi  169 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTI--------ERAKALDFP------VKIF-----SLDQLDEVVKKAKS  169 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCH--------HHHHTCCSS------CEEE-----EGGGHHHHHHTCSE
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHH------cccC-----CHHHHHhhhcCCCE
Confidence            8999995 8899999999999998 999999987        565555432      1111     23456677889999


Q ss_pred             EEEccc
Q 025660           86 VLHVAT   91 (249)
Q Consensus        86 vih~a~   91 (249)
                      ||++-.
T Consensus       170 VInatp  175 (253)
T 3u62_A          170 LFNTTS  175 (253)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            998764

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.06  E-value=0.00083  Score=58.39  Aligned_cols=78  Identities=15%  Similarity=0.204  Sum_probs=50.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeE-EE-----EcCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLR-IF-----HADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~-~~-----~~Dl~~~~~~~   77 (249)
                      |+|.|+| +|++|..++..|.+.|++|++++|++        ++.+.+.+-...  ...+. .+     .+.++...++.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~--------~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~   71 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSS--------TKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFK   71 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHH
Confidence            3799998 89999999999999999999999987        555555431100  00000 00     01122223455


Q ss_pred             HHHcCCCEEEEcccc
Q 025660           78 AAIAGCTGVLHVATP   92 (249)
Q Consensus        78 ~~~~~~d~vih~a~~   92 (249)
                      ++++++|+||-+...
T Consensus        72 ~~~~~aDvviiaVpt   86 (436)
T 1mv8_A           72 KAVLDSDVSFICVGT   86 (436)
T ss_dssp             HHHHTCSEEEECCCC
T ss_pred             HHhccCCEEEEEcCC
Confidence            667789999988754

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.05  E-value=0.00042  Score=58.63  Aligned_cols=80  Identities=20%  Similarity=0.184  Sum_probs=49.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC---CCCCeEEEEcCCCChhhHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG---ASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~Dl~~~~~~~   77 (249)
                      |++++++|.|+| +|.+|.+++..|.+.|++|++++|++        +..+.+.+...   ..+.+. +...+.-..++.
T Consensus        25 m~~~~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r~~--------~~~~~i~~~~~~~~~l~g~~-l~~~i~~t~d~~   94 (356)
T 3k96_A           25 MEPFKHPIAILG-AGSWGTALALVLARKGQKVRLWSYES--------DHVDEMQAEGVNNRYLPNYP-FPETLKAYCDLK   94 (356)
T ss_dssp             --CCCSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSCH--------HHHHHHHHHSSBTTTBTTCC-CCTTEEEESCHH
T ss_pred             ccccCCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHcCCCcccCCCCc-cCCCeEEECCHH
Confidence            444567899999 59999999999999999999999987        44444432110   001111 011111123456


Q ss_pred             HHHcCCCEEEEcc
Q 025660           78 AAIAGCTGVLHVA   90 (249)
Q Consensus        78 ~~~~~~d~vih~a   90 (249)
                      ++++++|+||-+.
T Consensus        95 ea~~~aDvVilaV  107 (356)
T 3k96_A           95 ASLEGVTDILIVV  107 (356)
T ss_dssp             HHHTTCCEEEECC
T ss_pred             HHHhcCCEEEECC
Confidence            6778889888554

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.05  E-value=0.00059  Score=56.06  Aligned_cols=68  Identities=15%  Similarity=0.139  Sum_probs=46.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+ ++++|.|+| +|.+|+.+++.|.+.|++|++++|++        ++.+.+.+.     .+..       ..+..+++
T Consensus         1 M~-~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~--------~~~~~~~~~-----g~~~-------~~~~~~~~   58 (301)
T 3cky_A            1 ME-KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLME--------ANVAAVVAQ-----GAQA-------CENNQKVA   58 (301)
T ss_dssp             ----CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSH--------HHHHHHHTT-----TCEE-------CSSHHHHH
T ss_pred             CC-CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHC-----CCee-------cCCHHHHH
Confidence            54 456899998 79999999999999999999999887        555544332     1221       12344556


Q ss_pred             cCCCEEEEcc
Q 025660           81 AGCTGVLHVA   90 (249)
Q Consensus        81 ~~~d~vih~a   90 (249)
                      +++|+||.+.
T Consensus        59 ~~~D~vi~~v   68 (301)
T 3cky_A           59 AASDIIFTSL   68 (301)
T ss_dssp             HHCSEEEECC
T ss_pred             hCCCEEEEEC
Confidence            6678887665

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.04  E-value=0.0011  Score=55.77  Aligned_cols=75  Identities=13%  Similarity=0.111  Sum_probs=52.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC--hhhHHHHH-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH--PDGFDAAI-   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~--~~~~~~~~-   80 (249)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++        ++.+.+.++..    ..++  |..+  .+.+.++- 
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~--------~~~~~~~~lGa----~~vi--~~~~~~~~~~~~~~~  215 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRN--------ETIEWTKKMGA----DIVL--NHKESLLNQFKTQGI  215 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSH--------HHHHHHHHHTC----SEEE--CTTSCHHHHHHHHTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhcCC----cEEE--ECCccHHHHHHHhCC
Confidence            457899999999999999999988999999999877        56665555421    1222  3322  23343331 


Q ss_pred             cCCCEEEEcccc
Q 025660           81 AGCTGVLHVATP   92 (249)
Q Consensus        81 ~~~d~vih~a~~   92 (249)
                      .++|+|++++|.
T Consensus       216 ~g~Dvv~d~~g~  227 (346)
T 3fbg_A          216 ELVDYVFCTFNT  227 (346)
T ss_dssp             CCEEEEEESSCH
T ss_pred             CCccEEEECCCc
Confidence            158999999874

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.03  E-value=0.0019  Score=55.20  Aligned_cols=74  Identities=16%  Similarity=0.069  Sum_probs=51.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCC------------
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS------------   71 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~------------   71 (249)
                      .+++|+|+|+ |-+|..+++.+...|.+|++++|++        .+.+.+.++.     ..++..|..            
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~--------~~~~~~~~~G-----a~~~~i~~~~~~~~~~~~~~~  236 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRA--------ATKEQVESLG-----GKFITVDDEAMKTAETAGGYA  236 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCS--------TTHHHHHHTT-----CEECCC---------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcC-----CeEEeecccccccccccccch
Confidence            3579999994 8999999999999999999999987        4444333321     111111111            


Q ss_pred             ----------ChhhHHHHHcCCCEEEEccc
Q 025660           72 ----------HPDGFDAAIAGCTGVLHVAT   91 (249)
Q Consensus        72 ----------~~~~~~~~~~~~d~vih~a~   91 (249)
                                ..+.+.+++.++|+||+++.
T Consensus       237 ~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          237 KEMGEEFRKKQAEAVLKELVKTDIAITTAL  266 (384)
T ss_dssp             --------CCHHHHHHHHHTTCSEEEECCC
T ss_pred             hhcCHHHHhhhHHHHHHHhCCCCEEEECCc
Confidence                      13347788889999998883

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.03  E-value=0.004  Score=50.49  Aligned_cols=35  Identities=17%  Similarity=0.304  Sum_probs=29.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC-CCeEEE-EEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTT-TVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~-~~r~~   39 (249)
                      |++|.|+||+|.+|+.+++.+.+. +.++++ ++|+.
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            568999999999999999999876 568777 45553

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.03  E-value=0.0078  Score=48.20  Aligned_cols=84  Identities=15%  Similarity=0.194  Sum_probs=51.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCc-------c--------cCCchhhhhhccCCCCCCCeEEEEc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------E--------HRNSKDLSFLKNLPGASERLRIFHA   68 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~--------~~~~~~~~~l~~~~~~~~~~~~~~~   68 (249)
                      .++|+|.|+ |.+|+++++.|...|. ++++++++.-+.       .        .+.....+.+.++. ...+++.+..
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~~v~~~~~  105 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN-PDIQLTALQQ  105 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEEEECS
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC-CCCEEEEEec
Confidence            468999996 5699999999999996 788887653110       0        00011111222221 1123445555


Q ss_pred             CCCChhhHHHHHcCCCEEEEccc
Q 025660           69 DLSHPDGFDAAIAGCTGVLHVAT   91 (249)
Q Consensus        69 Dl~~~~~~~~~~~~~d~vih~a~   91 (249)
                      +++ .+.+.++++++|+||.+..
T Consensus       106 ~~~-~~~~~~~~~~~DvVi~~~d  127 (251)
T 1zud_1          106 RLT-GEALKDAVARADVVLDCTD  127 (251)
T ss_dssp             CCC-HHHHHHHHHHCSEEEECCS
T ss_pred             cCC-HHHHHHHHhcCCEEEECCC
Confidence            554 3567788889999997643

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.03  E-value=0.0018  Score=53.10  Aligned_cols=69  Identities=14%  Similarity=0.186  Sum_probs=51.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|+|.| .|.||+.+++.|...|.+|++.+|+.        ++.+.+.+.     +...+     +.+++.++++++
T Consensus       154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~--------~~~~~~~~~-----g~~~~-----~~~~l~~~l~~a  214 (293)
T 3d4o_A          154 HGANVAVLG-LGRVGMSVARKFAALGAKVKVGARES--------DLLARIAEM-----GMEPF-----HISKAAQELRDV  214 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHT-----TSEEE-----EGGGHHHHTTTC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHC-----CCeec-----ChhhHHHHhcCC
Confidence            468999999 68999999999999999999999986        443333322     12222     235677888999


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |+|+.+..
T Consensus       215 DvVi~~~p  222 (293)
T 3d4o_A          215 DVCINTIP  222 (293)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99998874

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=97.01  E-value=0.0044  Score=52.69  Aligned_cols=74  Identities=12%  Similarity=0.126  Sum_probs=54.8

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |..++++|||+|+ |.+|..+++.+.+.|++|++++..+.        ... . ..     .-..+..|..|.+.+.+++
T Consensus         7 m~~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~--------~~~-~-~~-----~d~~~~~~~~d~~~l~~~~   70 (391)
T 1kjq_A            7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD--------APA-M-HV-----AHRSHVINMLDGDALRRVV   70 (391)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT--------CGG-G-GG-----SSEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCC--------Cch-h-hh-----ccceEECCCCCHHHHHHHH
Confidence            5566789999986 68999999999999999999987651        110 0 01     1145677888998888887


Q ss_pred             c--CCCEEEEcc
Q 025660           81 A--GCTGVLHVA   90 (249)
Q Consensus        81 ~--~~d~vih~a   90 (249)
                      +  ++|.|+...
T Consensus        71 ~~~~~d~v~~~~   82 (391)
T 1kjq_A           71 ELEKPHYIVPEI   82 (391)
T ss_dssp             HHHCCSEEEECS
T ss_pred             HHcCCCEEEECC
Confidence            5  789988643

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=97.01  E-value=7e-05  Score=65.67  Aligned_cols=115  Identities=16%  Similarity=0.144  Sum_probs=71.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC-----CCeEEEEEcCCCCcccCCchhhhhhccC-----CCCCCCeEEEEcCCCChh
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH-----GYSVTTTVRSELDPEHRNSKDLSFLKNL-----PGASERLRIFHADLSHPD   74 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~Dl~~~~   74 (249)
                      +++|.|+||++..|.+++..|+.+     +++|.++++++        ++.+.....     +.......+...     .
T Consensus        28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~--------e~~~~~~~~~~~~l~~~~~~~~I~~t-----~   94 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK--------ERQDRIAGACDVFIREKAPDIEFAAT-----T   94 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH--------HHHHHHHHHHHHHHHHHCTTSEEEEE-----S
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH--------HHHHHHHHHHHHHhccCCCCCEEEEE-----C
Confidence            458999998876688888889888     67999999987        433322111     000111222211     3


Q ss_pred             hHHHHHcCCCEEEEccccCCCCC---------------CCh-----HHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           75 GFDAAIAGCTGVLHVATPVDFED---------------KEP-----EEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~---------------~~~-----~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      ++.+.++++|+||.+++......               .+.     . .....|+...+.+++.+.+.. +..++...|.
T Consensus        95 D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl-~~~~rni~i~~~i~~~i~~~~-P~A~ii~~TN  172 (472)
T 1u8x_X           95 DPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGI-AYGMRSIGGVLEILDYMEKYS-PDAWMLNYSN  172 (472)
T ss_dssp             CHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEECCS
T ss_pred             CHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhH-HHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCC
Confidence            45667889999999998632200               000     1 235667778888888888887 3444445443

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.00  E-value=0.0033  Score=52.04  Aligned_cols=109  Identities=17%  Similarity=0.100  Sum_probs=71.7

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhh-ccCCC----CCCCeEEEE-cCCCChhhHHHH
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFL-KNLPG----ASERLRIFH-ADLSHPDGFDAA   79 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l-~~~~~----~~~~~~~~~-~Dl~~~~~~~~~   79 (249)
                      +|.|+|| |.+|..++..|+..+. +|++++++.        ++.+.. .++..    ......+.. .|   .    +.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~--------~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~----~a   64 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTP--------GKPQGEALDLAHAAAELGVDIRISGSNS---Y----ED   64 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSST--------THHHHHHHHHHHHHHHHTCCCCEEEESC---G----GG
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCCh--------hhHHHHHHHHHHhhhhcCCCeEEEECCC---H----HH
Confidence            5889998 9999999999988887 799999986        333221 11100    011222222 33   2    24


Q ss_pred             HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      ++++|+||-+++......... ......|+.-.+.+++.+.+..+...++.+|
T Consensus        65 ~~~aD~Vi~~ag~~~k~G~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           65 MRGSDIVLVTAGIGRKPGMTR-EQLLEANANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             GTTCSEEEECCSCCCCSSCCT-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             hCCCCEEEEeCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            789999999988644322222 3778899999999999998876344566654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.00  E-value=0.0011  Score=56.08  Aligned_cols=74  Identities=15%  Similarity=0.223  Sum_probs=49.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC--hhhHHHHHcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH--PDGFDAAIAG   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~   82 (249)
                      +++|||+|| |.+|..+++.+...|.+|++++++..     ..++.+.+.++     ....+  | .+  .+.+.+.-.+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~-----~~~~~~~~~~~-----ga~~v--~-~~~~~~~~~~~~~~  246 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREP-----TEVEQTVIEET-----KTNYY--N-SSNGYDKLKDSVGK  246 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCC-----CHHHHHHHHHH-----TCEEE--E-CTTCSHHHHHHHCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCcc-----chHHHHHHHHh-----CCcee--c-hHHHHHHHHHhCCC
Confidence            679999999 99999999998888999999998750     11122333332     12222  4 43  2233331246


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||+++|.
T Consensus       247 ~d~vid~~g~  256 (366)
T 2cdc_A          247 FDVIIDATGA  256 (366)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.98  E-value=0.0014  Score=54.21  Aligned_cols=66  Identities=17%  Similarity=0.270  Sum_probs=46.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++|.|+| +|.+|+.+++.|.+.|++|++++|++        ++.+.+.+.     ++..       ..+..++++++|
T Consensus        30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~--------~~~~~~~~~-----g~~~-------~~~~~~~~~~~D   88 (316)
T 2uyy_A           30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTA--------EKCDLFIQE-----GARL-------GRTPAEVVSTCD   88 (316)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSG--------GGGHHHHHT-----TCEE-------CSCHHHHHHHCS
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHc-----CCEE-------cCCHHHHHhcCC
Confidence            46899999 69999999999999999999999987        444444331     1111       112344556678


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      +||-+..
T Consensus        89 vVi~av~   95 (316)
T 2uyy_A           89 ITFACVS   95 (316)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            7776654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.98  E-value=0.001  Score=57.31  Aligned_cols=71  Identities=20%  Similarity=0.163  Sum_probs=51.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++|+|+|+ |.+|+.+++.|...|. +|++++|+.        ++.+.+....+    ...  .   +.+++.+++.+
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~--------~ra~~la~~~g----~~~--~---~~~~l~~~l~~  227 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY--------ERAVELARDLG----GEA--V---RFDELVDHLAR  227 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH--------HHHHHHHHHHT----CEE--C---CGGGHHHHHHT
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHHHcC----Cce--e---cHHhHHHHhcC
Confidence            4679999997 9999999999999998 999999986        44433321111    121  1   23456777789


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||.+.+.
T Consensus       228 aDvVi~at~~  237 (404)
T 1gpj_A          228 SDVVVSATAA  237 (404)
T ss_dssp             CSEEEECCSS
T ss_pred             CCEEEEccCC
Confidence            9999999764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.98  E-value=0.0018  Score=56.62  Aligned_cols=45  Identities=18%  Similarity=0.206  Sum_probs=37.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL   56 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~   56 (249)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++        ++.+.+.++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~--------~~~~~~~~l  272 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSP--------QKAEICRAM  272 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH--------HHHHHHHhh
Confidence            356899999999999999999888999999999876        666665544

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.98  E-value=0.0032  Score=53.50  Aligned_cols=68  Identities=10%  Similarity=0.145  Sum_probs=52.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      ++|+|+|+ |.+|+.+++.|.+.|++|++++.++.       .....   .     .-..+..|..|.+.+.++++++|.
T Consensus         2 ~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~-------~~~~~---~-----~~~~~~~~~~d~~~l~~~~~~~d~   65 (380)
T 3ax6_A            2 KKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPR-------SPAGQ---V-----ADEQIVAGFFDSERIEDLVKGSDV   65 (380)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTT-------CTTGG---G-----SSEEEECCTTCHHHHHHHHHTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC-------Cchhh---h-----CceEEECCCCCHHHHHHHHhcCCE
Confidence            58999995 78999999999999999999987651       00001   1     113567899999999999889999


Q ss_pred             EEEc
Q 025660           86 VLHV   89 (249)
Q Consensus        86 vih~   89 (249)
                      |+..
T Consensus        66 v~~~   69 (380)
T 3ax6_A           66 TTYD   69 (380)
T ss_dssp             EEES
T ss_pred             EEec
Confidence            8753

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.97  E-value=0.00066  Score=55.72  Aligned_cols=65  Identities=17%  Similarity=0.252  Sum_probs=46.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      ++|.|+| +|.+|+.++..|.+.|++|++++|++        ++.+.+.+.     ++..       ..++.++++++|+
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~--------~~~~~~~~~-----g~~~-------~~~~~~~~~~~D~   64 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNP--------EAIADVIAA-----GAET-------ASTAKAIAEQCDV   64 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHT-----TCEE-------CSSHHHHHHHCSE
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHC-----CCee-------cCCHHHHHhCCCE
Confidence            5899999 79999999999999999999999987        555444332     1111       1234445566788


Q ss_pred             EEEccc
Q 025660           86 VLHVAT   91 (249)
Q Consensus        86 vih~a~   91 (249)
                      ||.+..
T Consensus        65 vi~~v~   70 (299)
T 1vpd_A           65 IITMLP   70 (299)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            776654

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.95  E-value=0.0012  Score=52.63  Aligned_cols=35  Identities=29%  Similarity=0.318  Sum_probs=31.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .+++|.|+| +|.+|+++++.|.+.|++|++++|++
T Consensus        18 ~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~   52 (245)
T 3dtt_A           18 QGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDP   52 (245)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            457899997 89999999999999999999999987

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.95  E-value=0.0067  Score=49.65  Aligned_cols=109  Identities=13%  Similarity=0.145  Sum_probs=65.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcc--------------cCCchhhhhhccCCCCCCCeEEEEcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE--------------HRNSKDLSFLKNLPGASERLRIFHAD   69 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------~~~~~~~~~l~~~~~~~~~~~~~~~D   69 (249)
                      ..+|+|.| .|.+|+++++.|...|. +++++|.+.-+..              .+.....+.+.++. ...+++.+..+
T Consensus        36 ~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN-P~v~v~~~~~~  113 (292)
T 3h8v_A           36 TFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN-PDVLFEVHNYN  113 (292)
T ss_dssp             GCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC-TTSEEEEECCC
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC-CCcEEEEeccc
Confidence            36899999 56799999999999995 8888887541100              01111122222222 12356677778


Q ss_pred             CCChhhHHHHH-----------cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           70 LSHPDGFDAAI-----------AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        70 l~~~~~~~~~~-----------~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      +++.+.+.+++           +++|+||.+...       .         ..-..+-++|.+.+  ..+|+.+.
T Consensus       114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn-------~---------~~R~~in~~c~~~~--~Pli~~gv  170 (292)
T 3h8v_A          114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN-------F---------EARMTINTACNELG--QTWMESGV  170 (292)
T ss_dssp             TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS-------H---------HHHHHHHHHHHHHT--CCEEEEEE
T ss_pred             CCcHHHHHHHhhhhcccccccCCCCCEEEECCcc-------h---------hhhhHHHHHHHHhC--CCEEEeee
Confidence            88767676665           578999965431       1         11124556677766  45665543

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.95  E-value=0.00093  Score=55.23  Aligned_cols=67  Identities=21%  Similarity=0.174  Sum_probs=48.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++|.|+| .|.+|+.+++.|.+.|++|++++|++        ++.+.+.+.     ++.       ...+..++++++
T Consensus         8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~--------~~~~~~~~~-----g~~-------~~~~~~e~~~~a   66 (306)
T 3l6d_A            8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSP--------GKAAALVAA-----GAH-------LCESVKAALSAS   66 (306)
T ss_dssp             CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSH--------HHHHHHHHH-----TCE-------ECSSHHHHHHHS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHC-----CCe-------ecCCHHHHHhcC
Confidence            356899998 89999999999999999999999987        555554332     111       123455666678


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |+||-+..
T Consensus        67 DvVi~~vp   74 (306)
T 3l6d_A           67 PATIFVLL   74 (306)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEEeC
Confidence            88776554

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.95  E-value=0.0048  Score=50.87  Aligned_cols=110  Identities=14%  Similarity=0.093  Sum_probs=69.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      +++|.|+|| |.+|..++..|+.+|.  +|+++++++. ..    .....+.....  .++.. ..|      + +.+++
T Consensus        14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~----g~a~dl~~~~~--~~i~~-t~d------~-~~l~~   77 (303)
T 2i6t_A           14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TK----GATMDLEIFNL--PNVEI-SKD------L-SASAH   77 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC----------CHHHHHHHTC--TTEEE-ESC------G-GGGTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hH----HHHHHHhhhcC--CCeEE-eCC------H-HHHCC
Confidence            468999995 9999999999999998  9999999862 11    11111111111  13443 233      2 34779


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      +|+||-++|....  .....++...|+.-.+.+++.+.+..+...++.+|
T Consensus        78 aD~Vi~aag~~~p--G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           78 SKVVIFTVNSLGS--SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             CSEEEECCCC------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             CCEEEEcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            9999999987422  22223778888888888888888765233444443

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.93  E-value=0.008  Score=50.83  Aligned_cols=26  Identities=27%  Similarity=0.312  Sum_probs=23.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY   30 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~   30 (249)
                      +.+|.|.||||++|..|++.|.+++|
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~   27 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTL   27 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCC
Confidence            45899999999999999998888766

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.93  E-value=0.0078  Score=52.19  Aligned_cols=119  Identities=13%  Similarity=0.074  Sum_probs=67.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeE------EEEcCCCChhh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLR------IFHADLSHPDG   75 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~------~~~~Dl~~~~~   75 (249)
                      .|.+|.|+| .|++|.-++-.|.+.||+|++++.++        ++.+.+.+-...  ...+.      .-.+.++-..+
T Consensus        20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~--------~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~   90 (444)
T 3vtf_A           20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNP--------SIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAES   90 (444)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCH--------HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSS
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCH--------HHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcC
Confidence            457899997 99999999999999999999999988        677766432110  00000      00011111123


Q ss_pred             HHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           76 FDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        76 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      ..+.++.+|+++-|.+........+.-.++   ...++.+.+.++..++-.-+|+-||.
T Consensus        91 ~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v---~~a~~~I~~~l~~~~~g~lVV~eSTV  146 (444)
T 3vtf_A           91 AEEAVAATDATFIAVGTPPAPDGSADLRYV---EAAARAVGRGIRAKGRWHLVVVKSTV  146 (444)
T ss_dssp             HHHHHHTSSEEEECCCCCBCTTSSBCCHHH---HHHHHHHHHHHHHHCSCCEEEECSCC
T ss_pred             HHHHHhcCCceEEEecCCCCCCCCCCcHHH---HHHHHHHHHHHhhcCCCeEEEEeCCC
Confidence            455667789988776632211111110111   23445566666654412345555663

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.93  E-value=0.0016  Score=55.20  Aligned_cols=74  Identities=19%  Similarity=0.099  Sum_probs=53.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++        ++.+.+.++..    ..  ..|..+.+.++++..++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~--------~~~~~a~~lGa----~~--vi~~~~~~~~~~~~~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSE--------AKREAAKALGA----DE--VVNSRNADEMAAHLKSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHTC----SE--EEETTCHHHHHTTTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC----cE--EeccccHHHHHHhhcCC
Confidence            3568999997 7799999998888899999999887        55555544321    12  23555555444444579


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+||+++|.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999885

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.92  E-value=0.00096  Score=55.33  Aligned_cols=69  Identities=13%  Similarity=0.103  Sum_probs=46.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++|.|+| .|.+|..+++.|.+.|+ +|++++|+.      ..++.+.+.+.     ++..       ..+..+++++
T Consensus        23 ~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~------~~~~~~~~~~~-----g~~~-------~~~~~e~~~~   83 (312)
T 3qsg_A           23 NAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAAS------AESWRPRAEEL-----GVSC-------KASVAEVAGE   83 (312)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSC------HHHHHHHHHHT-----TCEE-------CSCHHHHHHH
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCC------CHHHHHHHHHC-----CCEE-------eCCHHHHHhc
Confidence            457899998 79999999999999999 999999962      00333333322     1111       1244556677


Q ss_pred             CCEEEEccc
Q 025660           83 CTGVLHVAT   91 (249)
Q Consensus        83 ~d~vih~a~   91 (249)
                      +|+||-+..
T Consensus        84 aDvVi~~vp   92 (312)
T 3qsg_A           84 CDVIFSLVT   92 (312)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEEecC
Confidence            888886654

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.89  E-value=0.00098  Score=53.53  Aligned_cols=68  Identities=15%  Similarity=0.052  Sum_probs=47.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++|.|+| +|.+|+.+++.|.+.|++|.+++|++        ++.+.+.+...    +       ....++.++++++
T Consensus         2 ~~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~--------~~~~~~~~~~g----~-------~~~~~~~~~~~~~   61 (259)
T 2ahr_A            2 NAMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSL--------ERSKEIAEQLA----L-------PYAMSHQDLIDQV   61 (259)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSH--------HHHHHHHHHHT----C-------CBCSSHHHHHHTC
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCH--------HHHHHHHHHcC----C-------EeeCCHHHHHhcC
Confidence            346899999 79999999999999999999999987        44444432100    1       1112345566788


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |+||-+..
T Consensus        62 D~Vi~~v~   69 (259)
T 2ahr_A           62 DLVILGIK   69 (259)
T ss_dssp             SEEEECSC
T ss_pred             CEEEEEeC
Confidence            98887764

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.88  E-value=0.0022  Score=55.09  Aligned_cols=74  Identities=15%  Similarity=0.090  Sum_probs=51.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCC-------------
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-------------   71 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~-------------   71 (249)
                      +++|+|+|+ |-+|..+++.+...|.+|++++|+.        ++.+.+.++.     ..++..|..             
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~--------~~~~~~~~lG-----a~~~~~~~~~~~~~~~g~~~~~  237 (401)
T 1x13_A          172 PAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRP--------EVKEQVQSMG-----AEFLELDFKEEAGSGDGYAKVM  237 (401)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCG--------GGHHHHHHTT-----CEECCC--------CCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHcC-----CEEEEecccccccccccchhhc
Confidence            578999995 8899999999999999999999987        5544444431     222222221             


Q ss_pred             Ch-------hhHHHHHcCCCEEEEcccc
Q 025660           72 HP-------DGFDAAIAGCTGVLHVATP   92 (249)
Q Consensus        72 ~~-------~~~~~~~~~~d~vih~a~~   92 (249)
                      +.       +.+.+++.++|+||.+++.
T Consensus       238 ~~~~~~~~~~~l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          238 SDAFIKAEMELFAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             SHHHHHHHHHHHHHHHHHCSEEEECCCC
T ss_pred             cHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            11       1466777789999998654

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.88  E-value=0.0015  Score=53.41  Aligned_cols=34  Identities=18%  Similarity=0.238  Sum_probs=29.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +|++|.|+| +|.+|+.+++.|.+.|++|++++ ++
T Consensus         2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~   35 (295)
T 1yb4_A            2 NAMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IG   35 (295)
T ss_dssp             --CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence            346899998 79999999999999999999988 65

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.87  E-value=0.0012  Score=55.47  Aligned_cols=69  Identities=14%  Similarity=0.135  Sum_probs=50.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++        ++.+.+.++..    -.++    .+++.+.+   ++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~--------~~~~~~~~lGa----~~v~----~~~~~~~~---~~  235 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNE--------HKKQDALSMGV----KHFY----TDPKQCKE---EL  235 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSS--------TTHHHHHHTTC----SEEE----SSGGGCCS---CE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHhcCC----Ceec----CCHHHHhc---CC
Confidence            4578999997 8999999998888899999999887        56665555422    1233    34443332   89


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|+++.|.
T Consensus       236 D~vid~~g~  244 (348)
T 3two_A          236 DFIISTIPT  244 (348)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCc
Confidence            999999885

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.85  E-value=0.0012  Score=55.73  Aligned_cols=74  Identities=14%  Similarity=-0.017  Sum_probs=51.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh-hhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~   82 (249)
                      .+.+|||+|| |.+|..+++.+...|.+|+++++++        ++.+.+.++..    ..+  .|..+. +..+++..+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~--------~~~~~~~~lGa----~~v--~~~~~~~~~~~~~~~~  243 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS--------RKREDAMKMGA----DHY--IATLEEGDWGEKYFDT  243 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS--------TTHHHHHHHTC----SEE--EEGGGTSCHHHHSCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHcCC----CEE--EcCcCchHHHHHhhcC
Confidence            3578999999 9999999988888899999999987        55554444321    122  233333 323333347


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+||.+.+.
T Consensus       244 ~D~vid~~g~  253 (360)
T 1piw_A          244 FDLIVVCASS  253 (360)
T ss_dssp             EEEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.84  E-value=0.0028  Score=51.32  Aligned_cols=65  Identities=20%  Similarity=0.252  Sum_probs=46.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++++|+|+ |..|++++..|.+.|.+|+++.|+.        ++.+.+.+.     .+...  ++.+.       .++|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~--------~ka~~la~~-----~~~~~--~~~~l-------~~~D  174 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSS--------RGLDFFQRL-----GCDCF--MEPPK-------SAFD  174 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC--------TTHHHHHHH-----TCEEE--SSCCS-------SCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHC-----CCeEe--cHHHh-------ccCC
Confidence            578999995 8899999999999999999999998        555544422     12222  22221       2799


Q ss_pred             EEEEcccc
Q 025660           85 GVLHVATP   92 (249)
Q Consensus        85 ~vih~a~~   92 (249)
                      +|||+-..
T Consensus       175 iVInaTp~  182 (269)
T 3phh_A          175 LIINATSA  182 (269)
T ss_dssp             EEEECCTT
T ss_pred             EEEEcccC
Confidence            99988654

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.83  E-value=0.0017  Score=53.47  Aligned_cols=43  Identities=16%  Similarity=0.218  Sum_probs=36.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN   55 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~   55 (249)
                      .|++|-++| -|..|+.+++.|++.||+|++++|++        ++.+.+.+
T Consensus         2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~--------~~~~~l~~   44 (300)
T 3obb_A            2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQ--------SAVDGLVA   44 (300)
T ss_dssp             -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSH--------HHHHHHHH
T ss_pred             CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCH--------HHHHHHHH
Confidence            356899998 89999999999999999999999987        66665543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.83  E-value=0.0012  Score=54.82  Aligned_cols=74  Identities=20%  Similarity=0.214  Sum_probs=52.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+.+|||+||+|.+|...++.+...|.+|++++++.         +.+.++++..   . .  ..|..+.+.+.+.+.++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~---------~~~~~~~lGa---~-~--~i~~~~~~~~~~~~~g~  216 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR---------NHAFLKALGA---E-Q--CINYHEEDFLLAISTPV  216 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH---------HHHHHHHHTC---S-E--EEETTTSCHHHHCCSCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc---------hHHHHHHcCC---C-E--EEeCCCcchhhhhccCC
Confidence            457899999999999999999988999999887543         3344443321   1 1  23555544466666789


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|+++.|.
T Consensus       217 D~v~d~~g~  225 (321)
T 3tqh_A          217 DAVIDLVGG  225 (321)
T ss_dssp             EEEEESSCH
T ss_pred             CEEEECCCc
Confidence            999999884

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.83  E-value=0.0018  Score=53.90  Aligned_cols=72  Identities=18%  Similarity=0.258  Sum_probs=47.7

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh--hhHHHHH-cCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP--DGFDAAI-AGC   83 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~--~~~~~~~-~~~   83 (249)
                      +|||+||+|.+|..+++.+...|.+|+++++++        ++.+.+.++..   . ..  .|..+.  +.+.++. .++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~--------~~~~~~~~lGa---~-~~--i~~~~~~~~~~~~~~~~~~  217 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA--------AEHDYLRVLGA---K-EV--LAREDVMAERIRPLDKQRW  217 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT--------TCHHHHHHTTC---S-EE--EECC---------CCSCCE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHcCC---c-EE--EecCCcHHHHHHHhcCCcc
Confidence            799999999999999998888999999999987        55555544421   1 22  233332  1122221 258


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+||+++|.
T Consensus       218 d~vid~~g~  226 (328)
T 1xa0_A          218 AAAVDPVGG  226 (328)
T ss_dssp             EEEEECSTT
T ss_pred             cEEEECCcH
Confidence            999999884

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.82  E-value=0.0053  Score=51.67  Aligned_cols=74  Identities=18%  Similarity=0.117  Sum_probs=50.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCC--C-hhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS--H-PDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~--~-~~~~~~~   79 (249)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++        ++.+.+.++..   . .++  |..  + .+..+++
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~--------~~~~~a~~lGa---~-~vi--~~~~~~~~~~~~~i  235 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA--------TRLSKAKEIGA---D-LVL--QISKESPQEIARKV  235 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHHHTTC---S-EEE--ECSSCCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH--------HHHHHHHHhCC---C-EEE--cCcccccchHHHHH
Confidence            3578999996 8999999988888898 899999887        56555554422   1 222  333  2 2222222


Q ss_pred             ---H-cCCCEEEEcccc
Q 025660           80 ---I-AGCTGVLHVATP   92 (249)
Q Consensus        80 ---~-~~~d~vih~a~~   92 (249)
                         . .++|+||++.|.
T Consensus       236 ~~~~~~g~D~vid~~g~  252 (356)
T 1pl8_A          236 EGQLGCKPEVTIECTGA  252 (356)
T ss_dssp             HHHHTSCCSEEEECSCC
T ss_pred             HHHhCCCCCEEEECCCC
Confidence               2 369999999884

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.81  E-value=0.0042  Score=53.31  Aligned_cols=70  Identities=11%  Similarity=0.093  Sum_probs=53.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++|+|.| +|.+|+.+++.+.+.|++|++++ .+.       .....+..      ....+.+|..|.+.+.++++.+
T Consensus        23 ~~~~I~ilG-gG~lg~~l~~aa~~lG~~v~~~d-~~~-------~p~~~~ad------~~~~~~~~~~d~~~l~~~a~~~   87 (403)
T 3k5i_A           23 NSRKVGVLG-GGQLGRMLVESANRLNIQVNVLD-ADN-------SPAKQISA------HDGHVTGSFKEREAVRQLAKTC   87 (403)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEE-STT-------CTTGGGCC------SSCCEESCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE-CCC-------CcHHHhcc------ccceeecCCCCHHHHHHHHHhC
Confidence            357899999 57899999999999999999999 541       11111111      1134678999999999999999


Q ss_pred             CEEEE
Q 025660           84 TGVLH   88 (249)
Q Consensus        84 d~vih   88 (249)
                      |+|+-
T Consensus        88 d~i~~   92 (403)
T 3k5i_A           88 DVVTA   92 (403)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            98763

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.81  E-value=0.0024  Score=53.81  Aligned_cols=74  Identities=15%  Similarity=-0.032  Sum_probs=53.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++        ++.+.+. ++..   . .+  .|..+.+.+.++..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~--------~~~~~~~~~lGa---~-~v--i~~~~~~~~~~~~~g  244 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSN--------KKREEALQDLGA---D-DY--VIGSDQAKMSELADS  244 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESST--------THHHHHHTTSCC---S-CE--EETTCHHHHHHSTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCh--------HHHHHHHHHcCC---c-ee--eccccHHHHHHhcCC
Confidence            4578999995 8899999988888899999999987        5555443 3321   1 12  244555666665567


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+|++++|.
T Consensus       245 ~D~vid~~g~  254 (357)
T 2cf5_A          245 LDYVIDTVPV  254 (357)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.81  E-value=0.0024  Score=56.12  Aligned_cols=42  Identities=19%  Similarity=0.182  Sum_probs=36.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN   55 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~   55 (249)
                      .++|.|+| +|++|..++..|.+.|++|++++|++        ++.+.+.+
T Consensus         8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~--------~~v~~l~~   49 (478)
T 2y0c_A            8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQ--------AKIDILNN   49 (478)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHT
T ss_pred             CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHC
Confidence            46899998 89999999999999999999999987        66666543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.80  E-value=0.0018  Score=53.77  Aligned_cols=35  Identities=17%  Similarity=0.283  Sum_probs=32.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~   39 (249)
                      +.++|.|+| .|.+|..+++.|.+.|+  +|++++|++
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~   68 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP   68 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence            347899999 89999999999999999  999999987

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.79  E-value=0.0044  Score=51.86  Aligned_cols=35  Identities=17%  Similarity=0.259  Sum_probs=28.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRS   38 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~   38 (249)
                      .|++|.|+||||++|+.|++.|.+. .+++..+..+
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~   38 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVS   38 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEec
Confidence            3578999999999999999999985 4588776543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.77  E-value=0.0037  Score=50.77  Aligned_cols=56  Identities=13%  Similarity=0.132  Sum_probs=47.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++++|+|+++.+|+.++..|+..|..|++..|..                                  ..+.+.++++
T Consensus       159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t----------------------------------~~L~~~~~~A  204 (285)
T 3p2o_A          159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------------------KDLSLYTRQA  204 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------------SCHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----------------------------------hhHHHHhhcC
Confidence            578999999999999999999999999998876543                                  2356778899


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+||...+..
T Consensus       205 DIVI~Avg~p  214 (285)
T 3p2o_A          205 DLIIVAAGCV  214 (285)
T ss_dssp             SEEEECSSCT
T ss_pred             CEEEECCCCC
Confidence            9999988853

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.76  E-value=0.0015  Score=53.86  Aligned_cols=34  Identities=21%  Similarity=0.368  Sum_probs=28.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .+||-++| .|..|..+++.|++.||+|++++|++
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~   38 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTA   38 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC----
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            35899998 89999999999999999999999987

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.75  E-value=0.0053  Score=52.05  Aligned_cols=74  Identities=11%  Similarity=0.049  Sum_probs=50.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC-----hhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-----PDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-----~~~~~   77 (249)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++        ++.+.+.++..    ..+  .|..+     .+.+.
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~--------~~~~~~~~lGa----~~v--i~~~~~~~~~~~~~~  256 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNP--------DKFEKAKVFGA----TDF--VNPNDHSEPISQVLS  256 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG--------GGHHHHHHTTC----CEE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCH--------HHHHHHHHhCC----ceE--EeccccchhHHHHHH
Confidence            3568999995 9999999998888898 899998887        55555554421    122  34332     12233


Q ss_pred             HHHc-CCCEEEEcccc
Q 025660           78 AAIA-GCTGVLHVATP   92 (249)
Q Consensus        78 ~~~~-~~d~vih~a~~   92 (249)
                      ++.. ++|+||+++|.
T Consensus       257 ~~~~~g~D~vid~~g~  272 (374)
T 1cdo_A          257 KMTNGGVDFSLECVGN  272 (374)
T ss_dssp             HHHTSCBSEEEECSCC
T ss_pred             HHhCCCCCEEEECCCC
Confidence            3332 58999999884

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.74  E-value=0.00096  Score=53.30  Aligned_cols=65  Identities=8%  Similarity=0.072  Sum_probs=46.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC----eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY----SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|.|+| +|.+|+++++.|.+.|+    +|++++|++        ++.+.+.+..    ++..       ..+..++++
T Consensus         3 ~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~--------~~~~~~~~~~----g~~~-------~~~~~e~~~   62 (247)
T 3gt0_A            3 KQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNT--------ANLKNASEKY----GLTT-------TTDNNEVAK   62 (247)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCH--------HHHHHHHHHH----CCEE-------CSCHHHHHH
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCH--------HHHHHHHHHh----CCEE-------eCChHHHHH
Confidence            5899998 89999999999999998    999999987        5555443211    1111       123445566


Q ss_pred             CCCEEEEcc
Q 025660           82 GCTGVLHVA   90 (249)
Q Consensus        82 ~~d~vih~a   90 (249)
                      ++|+||-+.
T Consensus        63 ~aDvVilav   71 (247)
T 3gt0_A           63 NADILILSI   71 (247)
T ss_dssp             HCSEEEECS
T ss_pred             hCCEEEEEe
Confidence            788887665

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=96.74  E-value=0.0083  Score=51.83  Aligned_cols=73  Identities=10%  Similarity=0.151  Sum_probs=53.9

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++++|||+|+ |.+|..+++.+.+.|++|++++..+.        ... .. .     .-..+..|..|.+.+.++++ 
T Consensus        17 ~~~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~--------~~~-~~-~-----ad~~~~~~~~d~~~l~~~~~~   80 (433)
T 2dwc_A           17 DSAQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYAN--------APA-MQ-V-----AHRSYVGNMMDKDFLWSVVER   80 (433)
T ss_dssp             TTCCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTT--------CHH-HH-H-----SSEEEESCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC--------Chh-hh-h-----cceEEECCCCCHHHHHHHHHH
Confidence            34579999986 78999999999999999999987761        111 11 0     11356788899998888885 


Q ss_pred             -CCCEEEEccc
Q 025660           82 -GCTGVLHVAT   91 (249)
Q Consensus        82 -~~d~vih~a~   91 (249)
                       ++|.|+....
T Consensus        81 ~~~d~V~~~~e   91 (433)
T 2dwc_A           81 EKPDAIIPEIE   91 (433)
T ss_dssp             HCCSEEEECSS
T ss_pred             cCCCEEEECcc
Confidence             7999886443

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=96.72  E-value=0.0071  Score=50.73  Aligned_cols=69  Identities=19%  Similarity=0.166  Sum_probs=47.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh-hhHHHHHcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIAGC   83 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~   83 (249)
                      .++|.|+| .|.+|..+++.|.+.|++|++++|++        +..+...+.     ++..    ..+. +.+.+..+++
T Consensus         8 ~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~~--------~~~~~a~~~-----G~~~----~~~~~e~~~~a~~~a   69 (341)
T 3ktd_A            8 SRPVCILG-LGLIGGSLLRDLHAANHSVFGYNRSR--------SGAKSAVDE-----GFDV----SADLEATLQRAAAED   69 (341)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSCH--------HHHHHHHHT-----TCCE----ESCHHHHHHHHHHTT
T ss_pred             CCEEEEEe-ecHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHc-----CCee----eCCHHHHHHhcccCC
Confidence            46899998 79999999999999999999999987        554444332     1111    1232 2333445568


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |+||-+.-
T Consensus        70 DlVilavP   77 (341)
T 3ktd_A           70 ALIVLAVP   77 (341)
T ss_dssp             CEEEECSC
T ss_pred             CEEEEeCC
Confidence            99886654

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.71  E-value=0.0032  Score=54.51  Aligned_cols=78  Identities=9%  Similarity=0.114  Sum_probs=50.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeE-EE---EcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLR-IF---HADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~-~~---~~Dl~~~~~~~   77 (249)
                      ++|+|.|+| +|++|..++..|.+ |++|++++|++        ++.+.+.+-...  ...+. .+   .+.++-..++.
T Consensus        35 ~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~--------~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~  104 (432)
T 3pid_A           35 EFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQ--------AKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKH  104 (432)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCH--------HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCH--------HHhhHHhccCCccccccHHHHHhhccCCeEEEcCHH
Confidence            346899998 79999999999887 99999999988        666655432100  00000 00   01111123456


Q ss_pred             HHHcCCCEEEEccc
Q 025660           78 AAIAGCTGVLHVAT   91 (249)
Q Consensus        78 ~~~~~~d~vih~a~   91 (249)
                      ++++++|+||-+..
T Consensus       105 ea~~~aDvViiaVP  118 (432)
T 3pid_A          105 DAYRNADYVIIATP  118 (432)
T ss_dssp             HHHTTCSEEEECCC
T ss_pred             HHHhCCCEEEEeCC
Confidence            67889999987643

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.70  E-value=0.0028  Score=51.62  Aligned_cols=66  Identities=20%  Similarity=0.303  Sum_probs=49.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +++|.|+| +|.+|+++++.|.+.|+   +|++++|++        ++.+.+.+..    ++..       ..+..++++
T Consensus         3 ~~~I~iIG-~G~mG~aia~~l~~~g~~~~~V~v~dr~~--------~~~~~l~~~~----gi~~-------~~~~~~~~~   62 (280)
T 3tri_A            3 TSNITFIG-GGNMARNIVVGLIANGYDPNRICVTNRSL--------DKLDFFKEKC----GVHT-------TQDNRQGAL   62 (280)
T ss_dssp             CSCEEEES-CSHHHHHHHHHHHHTTCCGGGEEEECSSS--------HHHHHHHHTT----CCEE-------ESCHHHHHS
T ss_pred             CCEEEEEc-ccHHHHHHHHHHHHCCCCCCeEEEEeCCH--------HHHHHHHHHc----CCEE-------eCChHHHHh
Confidence            46899998 59999999999999998   999999998        6666554321    1221       124456778


Q ss_pred             CCCEEEEcc
Q 025660           82 GCTGVLHVA   90 (249)
Q Consensus        82 ~~d~vih~a   90 (249)
                      ++|+||-+.
T Consensus        63 ~aDvVilav   71 (280)
T 3tri_A           63 NADVVVLAV   71 (280)
T ss_dssp             SCSEEEECS
T ss_pred             cCCeEEEEe
Confidence            899998766

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.69  E-value=0.0016  Score=53.15  Aligned_cols=67  Identities=13%  Similarity=0.137  Sum_probs=48.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+++++|+|+ |..|++++..|.+.|. +|+++.|+.        ++.+.+.+.      +..+     ..+++.+ + +
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~--------~ka~~La~~------~~~~-----~~~~l~~-l-~  178 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNP--------EKTSEIYGE------FKVI-----SYDELSN-L-K  178 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHCTT------SEEE-----EHHHHTT-C-C
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHh------cCcc-----cHHHHHh-c-c
Confidence            4679999996 6799999999999998 999999987        666555432      1111     1123333 4 7


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+|||+-..
T Consensus       179 ~DivInaTp~  188 (282)
T 3fbt_A          179 GDVIINCTPK  188 (282)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECCcc
Confidence            9999988643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	249
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-27
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-23
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-22
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	7e-21
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-20
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-20
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-18
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-18
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-18
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-16
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-14
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-13
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	9e-13
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-12
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-11
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-11
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	7e-11
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	9e-10
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	6e-09
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-08
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	7e-08
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-07
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	5e-06
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	5e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	1e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	4e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	6e-05
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	2e-04
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-04
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-04
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-04
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	0.002
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	0.003
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.003

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 2e-27
 Identities = 45/224 (20%), Positives = 84/224 (37%), Gaps = 24/224 (10%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           + R+ +TGG GF+ S L  +L+  G+ V T V +      RN +     +N         
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMMDGHEV-TVVDNFFTGRKRNVEHWIGHENF-------- 51

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSCLKS 122
               +L + D  +        + H+A+P         P + + +    GTL +L    + 
Sbjct: 52  ----ELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTL-KTNTIGTLNMLGLAKRV 106

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G   R++  S++    Y D +V    E +W  V+ I         Y   K + E     +
Sbjct: 107 G--ARLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGPR----ACYDEGKRVAETMCYAY 158

Query: 183 AEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI 226
            ++ G+++         GP +       V + +   L    L +
Sbjct: 159 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 202

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 94.1 bits (233), Expect = 4e-23
 Identities = 38/207 (18%), Positives = 73/207 (35%), Gaps = 20/207 (9%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ +TGG GFI S ++  ++ +       +          + +L  L ++   S R    
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK-----LTYAGNLESLSDISE-SNRYNFE 55

Query: 67  HADLSHPDGFDAAIAG--CTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           HAD+                 V+H+A  + VD     P   I +  I GT  +L+   K 
Sbjct: 56  HADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFI-ETNIVGTYALLEVARKY 114

Query: 123 G--------TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTL 174
                       R  + S+   V+ +    D ++ +    +       +    Y+ SK  
Sbjct: 115 WSALGEDKKNNFRFHHIST-DEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKAS 173

Query: 175 TERAALEFAEEHGLDLVTLIPSMVVGP 201
           ++     +   +GL  +    S   GP
Sbjct: 174 SDHLVRAWRRTYGLPTIVTNCSNNYGP 200

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 92.2 bits (228), Expect = 2e-22
 Identities = 38/209 (18%), Positives = 63/209 (30%), Gaps = 22/209 (10%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
              +TG TG   S+L   LL+ GY V    R            +   ++    + +  + 
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHI--YQDPHTCNPKFHLH 60

Query: 67  HADLSHPDGFDAAIAGC----TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           + DLS        +          L   + V    + PE         GTL +L++    
Sbjct: 61  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTA-DVDAMGTLRLLEAIRFL 119

Query: 123 GT--VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAA 179
           G     R    S++    Y         ET               +S YA++K       
Sbjct: 120 GLEKKTRFYQASTSEL--YGLVQEIPQKETTPFY----------PRSPYAVAKLYAYWIT 167

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFA 208
           + + E +G+     I      P     F 
Sbjct: 168 VNYRESYGMYACNGILFNHESPRRGETFV 196

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 87.2 bits (215), Expect = 7e-21
 Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 32/207 (15%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFLKNLPGASERL 63
           K RV + G  G + S +  +L   G        R EL+    +S+ +             
Sbjct: 2   KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELN--LLDSRAV------------- 46

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
                D    +  D        V          +         + +     I+ +  ++ 
Sbjct: 47  ----HDFFASERIDQVYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQND 97

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            V ++++  S+    Y       M E+          L+   + YAI+K    +    + 
Sbjct: 98  -VNKLLFLGSSCI--YPKLAKQPMAESEL----LQGTLEPTNEPYAIAKIAGIKLCESYN 150

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGS 210
            ++G D  +++P+ + GP      + S
Sbjct: 151 RQYGRDYRSVMPTNLYGPHDNFHPSNS 177

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 87.2 bits (214), Expect = 1e-20
 Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 19/218 (8%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           + EG   V VTG  GF+AS ++ +LL+HGY V  T RS     +     L    +     
Sbjct: 8   LPEGS-LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-----LQKRWDAKYPG 61

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
                   D+     +D  I G  GV H+A+ V F +K  E V       GTL  L++  
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAI--GGTLNALRAAA 119

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVD---------MMDETFWSDVDYIRKLDSWGKSYAIS 171
            + +VKR V TSS  +      +V+          ++    +              YA S
Sbjct: 120 ATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAAS 179

Query: 172 KTLTERAALEFAEEHGL--DLVTLIPSMVVGPFICPKF 207
           KT  E AA +F +E+     L  ++P+  +G    P+ 
Sbjct: 180 KTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET 217

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 84.9 bits (209), Expect = 6e-20
 Identities = 44/196 (22%), Positives = 73/196 (37%), Gaps = 14/196 (7%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R+ VTGG GFI S  + +LL   Y         +      + + + L  +  A  RLR  
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFV 60

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRA-INGTLGILKSCLKSGTV 125
           H D+         + G   ++H A     +       +     + GT  +L+  + +G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV- 119

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
            RVV+ S+N    Y   D     E+   + +           YA SK  ++  A  +   
Sbjct: 120 GRVVHVSTNQV--YGSIDSGSWTESSPLEPNSP---------YAASKAGSDLVARAYHRT 168

Query: 186 HGLDLVTLIPSMVVGP 201
           +GLD+         GP
Sbjct: 169 YGLDVRITRCCNNYGP 184

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 81.2 bits (199), Expect = 1e-18
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 12/222 (5%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            + VTGG GFI S  +  + ++   V  TV  +L      + + + L+ + G  +R+ + 
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT----YAGNKANLEAILG--DRVELV 57

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
             D++  +  D   A    ++H A     D    +P   I      GT  +L++  K   
Sbjct: 58  VGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHT-NFIGTYTLLEAARKYDI 116

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
               V T          +D+    E            +     Y+ +K  ++     +  
Sbjct: 117 RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS-PYSSTKAASDLIVKAWVR 175

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI 226
             G+       S   GP+   +    +   +  IL  +K K+
Sbjct: 176 SFGVKATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKL 215

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (199), Expect = 2e-18
 Identities = 37/205 (18%), Positives = 55/205 (26%), Gaps = 19/205 (9%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           +TG TG   S+L   LL+ GY V   VR          + L            +++ + D
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGD 64

Query: 70  LSHPDGFDAAIAGCTGVLH----VATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-- 123
           L+        I              + V       E         GTL +L +    G  
Sbjct: 65  LTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTA-DVDGVGTLRLLDAVKTCGLI 123

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
              +    S++    Y         ET                 Y  +K       + F 
Sbjct: 124 NSVKFYQASTSEL--YGKVQEIPQKETTPFYPRSP---------YGAAKLYAYWIVVNFR 172

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFA 208
           E + L  V  I      P     F 
Sbjct: 173 EAYNLFAVNGILFNHESPRRGANFV 197

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 81.1 bits (199), Expect = 2e-18
 Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 20/198 (10%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ +TG  GFIAS +  RL   G+ V        D      K+    +++          
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIA-----SD----WKKNEHMTEDMFCD----EFH 63

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSGT 124
             DL   +       G   V ++A  +                N   +  ++++   +G 
Sbjct: 64  LVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING- 122

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           +KR  Y SS        +          SD       D    ++ + K  TE     + +
Sbjct: 123 IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD----AFGLEKLATEELCKHYNK 178

Query: 185 EHGLDLVTLIPSMVVGPF 202
           + G++        + GPF
Sbjct: 179 DFGIECRIGRFHNIYGPF 196

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 75.4 bits (184), Expect = 2e-16
 Identities = 30/208 (14%), Positives = 56/208 (26%), Gaps = 21/208 (10%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
              VTG TG   ++L   LL+ GY V   V           ++L    +       ++  
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGD-------IQYE 54

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLG---ILKSCLKSG 123
             D++       A+                            +   LG   +L++  +  
Sbjct: 55  DGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS 114

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
              R    S+  +  +     +  DE                  Y ++K       + + 
Sbjct: 115 PETRFYQAST--SEMFGLIQAERQDENTPFY---------PRSPYGVAKLYGHWITVNYR 163

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSV 211
           E  GL   + I      P    +F    
Sbjct: 164 ESFGLHASSGILFNHESPLRGIEFVTRK 191

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 68.6 bits (166), Expect = 4e-14
 Identities = 33/208 (15%), Positives = 55/208 (26%), Gaps = 14/208 (6%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           +    +TG TG   S+L   LL  GY V   +R   +   +    +    +       ++
Sbjct: 1   RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVN-KALMK 59

Query: 65  IFHADLSHPDGFDAAIAGCTGVLH----VATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           + +ADL+        I              + V    + P+      A      +     
Sbjct: 60  LHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 119

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            +    R V      +            ET                 YA SK       +
Sbjct: 120 HTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSP---------YAASKCAAHWYTV 170

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFA 208
            + E +GL     I      P     F 
Sbjct: 171 NYREAYGLFACNGILFNHESPRRGENFV 198

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 66.7 bits (161), Expect = 2e-13
 Identities = 27/168 (16%), Positives = 53/168 (31%), Gaps = 15/168 (8%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
           + K RV + GGTG+I   ++   +  G+      R E+       + L + K L      
Sbjct: 1   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-----G 55

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
            ++  A L        A+     V+             E++    A            ++
Sbjct: 56  AKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEA----------IKEA 105

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAI 170
           G +KR + +         +  +     TF       R +++    Y  
Sbjct: 106 GNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTY 153

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 64.4 bits (155), Expect = 9e-13
 Identities = 42/210 (20%), Positives = 75/210 (35%), Gaps = 17/210 (8%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ +TGG GF+ S L    L  G  +             N   LS L N           
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGN-------FEFV 54

Query: 67  HADLSHPDGFDAAIAGC--TGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           H D+ + +     I         H+A    +      P     +  + GTL +L++  + 
Sbjct: 55  HGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDF-EINVGGTLNLLEAVRQY 113

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK-----SYAISKTLTER 177
            +   ++Y+S+N      ++      ET ++ VD     D   +      Y  SK   ++
Sbjct: 114 NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQ 173

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKF 207
             L++A   GL+ V    S + G      +
Sbjct: 174 YMLDYARIFGLNTVVFRHSSMYGGRQFATY 203

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 64.2 bits (155), Expect = 1e-12
 Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 23/211 (10%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           RV VTGG+G+I S   ++LL +G+ V   + +  + +      +  L       +     
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDV-IILDNLCNSKRSVLPVIERLGG-----KHPTFV 55

Query: 67  HADLSHPDGFDAAIA--GCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             D+ +       +       V+H A    V    ++P E      +NGTL ++ +   +
Sbjct: 56  EGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYY-DNNVNGTLRLISAMRAA 114

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
             VK  +++SS     Y D+      E+F +              Y  SK + E+   + 
Sbjct: 115 N-VKNFIFSSSATV--YGDQPKIPYVESFPTGTPQS--------PYGKSKLMVEQILTDL 163

Query: 183 AEEHGLDLVTLI-PSMVVGPFICPKFAGSVR 212
            +      + L+     VG           +
Sbjct: 164 QKAQPDWSIALLRYFNPVGAHPSGDMGEDPQ 194

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 60.7 bits (146), Expect = 2e-11
 Identities = 43/204 (21%), Positives = 66/204 (32%), Gaps = 17/204 (8%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
              +TG  GFI S L+  LL     V   + +      RN  ++  L +    S   +  
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKV-VGLDNFATGHQRNLDEVRSLVSEKQWS-NFKFI 75

Query: 67  HADLSHPDGFDAAIAGCTGV--LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
             D+ + D  + A AG   V        V     +P        I+G L +L +   +  
Sbjct: 76  QGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSN-ATNIDGFLNMLIAARDAKV 134

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
                  SS+    Y D       E                  YA++K + E  A  F+ 
Sbjct: 135 QSFTYAASSS---TYGDHPGLPKVEDTI---------GKPLSPYAVTKYVNELYADVFSR 182

Query: 185 EHGLDLVTLIPSMVVGPFICPKFA 208
            +G   + L    V G    P  A
Sbjct: 183 CYGFSTIGLRYFNVFGRRQDPNGA 206

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 60.4 bits (145), Expect = 2e-11
 Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 20/153 (13%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           K  + V G TG   + LI      G+ V   V      +   +++L  + N       + 
Sbjct: 3   KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH---SLKGLIAEELQAIPN-------VT 52

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
           +F   L +       +     +  + T     D+         A            ++GT
Sbjct: 53  LFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADA----------AKRAGT 102

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY 157
           ++  +Y+S      Y       M    ++  +Y
Sbjct: 103 IQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENY 135

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (138), Expect = 7e-11
 Identities = 25/164 (15%), Positives = 48/164 (29%), Gaps = 20/164 (12%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + G TG      + + +  GY VT  VR          +                + 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR-------------PAHVV 51

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D+      D  +AG   V+ +    +            R I        + +K+  V 
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNI-------VAAMKAHGVD 104

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAI 170
           +VV  +S   ++   K    +       +   + L   G  Y  
Sbjct: 105 KVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVA 148

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.4 bits (137), Expect = 3e-10
 Identities = 33/236 (13%), Positives = 70/236 (29%), Gaps = 20/236 (8%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTGG G+I S  ++ L+++GY       +  +  + +   L  L         +  + 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDC-VVADNLSNSTYDSVARLEVLTK-----HHIPFYE 57

Query: 68  ADLSHPDGFDAAIA--GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
            DL    G +          V+H A      +     +           +L   ++   V
Sbjct: 58  VDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNV 117

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTER--AALEFA 183
            + V++SS        +  +M+       +            Y  +K   E     L  +
Sbjct: 118 SKFVFSSSATVYGDATRFPNMIPIPEECPLGPT-------NPYGHTKYAIENILNDLYNS 170

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVY 239
           ++       L     +G                 +   +       + R   L+++
Sbjct: 171 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNL---LPYMAQVAVGRREKLYIF 223

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 55.6 bits (132), Expect = 9e-10
 Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 4/84 (4%)

Query: 5  KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
          + R+ + G TG+I   +    LD G+     VR      +     L       GA     
Sbjct: 3  RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA----N 58

Query: 65 IFHADLSHPDGFDAAIAGCTGVLH 88
          I H  +        A+     V+ 
Sbjct: 59 IVHGSIDDHASLVEAVKNVDVVIS 82

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.4 bits (126), Expect = 6e-09
 Identities = 35/251 (13%), Positives = 66/251 (26%), Gaps = 23/251 (9%)

Query: 4   GKGRVCVTGGTGFIASWLIMRLLDHGYSVT------------TTVRSELDPEHRNSKDLS 51
           G  RV V GG G+      + L    Y V                   L P       +S
Sbjct: 1   GS-RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS 59

Query: 52  FLKNLPGASERLRIFHADLSHPDGFDAAIA------GCTGVLHVATPVDFEDKEPEEVIT 105
             K L G  + + ++  D+   +    +                + P    D+       
Sbjct: 60  RWKALTG--KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQ 117

Query: 106 QRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV--DYIRKLDS 163
              + GTL +L +  + G    +V   +       + D++    T   +   D +     
Sbjct: 118 HNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQ 177

Query: 164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVK 223
               Y +SK           +  G+    L   +V G             +         
Sbjct: 178 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 237

Query: 224 LKICCVMNRSH 234
             +     ++ 
Sbjct: 238 TALNRFCVQAA 248

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (119), Expect = 5e-08
 Identities = 26/206 (12%), Positives = 50/206 (24%), Gaps = 17/206 (8%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V VTGG G+I S  ++ LL+ GY                S   S  +        +   
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATP----VDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             D+             + +  +       V    ++P +              +  L  
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYY------------RVNLTG 111

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
                 +  +             +     +  +D           Y  SK   E    + 
Sbjct: 112 TIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL 171

Query: 183 AE-EHGLDLVTLIPSMVVGPFICPKF 207
            + +   + V L      G       
Sbjct: 172 CQADKTWNAVLLRYFNPTGAHASGCI 197

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 50.2 bits (118), Expect = 7e-08
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 8/68 (11%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
          RV VTG TGF   WL + L   G +V                  S  +     ++ ++  
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSL-------TAPTVPSLFETA-RVADGMQSE 61

Query: 67 HADLSHPD 74
            D+   +
Sbjct: 62 IGDIRDQN 69

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 49.8 bits (117), Expect = 1e-07
 Identities = 41/225 (18%), Positives = 70/225 (31%), Gaps = 16/225 (7%)

Query: 7   RVCVTGGTGFIASWLIMRLL-DHGYSVT-----TTVRSELDPEHRNSKDLSFLKNLPG-- 58
           RV V GG G+I S  +  LL D  +SV           + D           L+   G  
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 59  ---ASERLRIFHADLSHPDGFDAAIAGCTGV--LHVATPVDFEDKEPEEVITQRAINGTL 113
              A     +   D+ + D  +        +  +          +   + +     N   
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123

Query: 114 GILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKT 173
            +             +  SS+AA+F N     +       D++  +  +S    Y  SK 
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESP---YGESKL 180

Query: 174 LTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI 218
           + ER   + AE +G+  + L      G           + S  LI
Sbjct: 181 IAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLI 225

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 49.1 bits (115), Expect = 1e-07
 Identities = 10/51 (19%), Positives = 21/51 (41%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP 57
          ++ +TG  G +   +  +L      V  T   +LD  +  + +  F +  P
Sbjct: 3  KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKP 53

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 44.6 bits (103), Expect = 5e-06
 Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 11/74 (14%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
          RV + G  GFI + L  RLL   +     +          S  +S   N P         
Sbjct: 2  RVLILGVNGFIGNHLTERLLREDHYEVYGLD-------IGSDAISRFLNHP----HFHFV 50

Query: 67 HADLSHPDGFDAAI 80
            D+S    +    
Sbjct: 51 EGDISIHSEWIEYH 64

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.1 bits (102), Expect = 5e-06
 Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 2/44 (4%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVT--TTVRSELDPEHRNSK 48
           V VTG +G     +  +L +          VRS    E    +
Sbjct: 5  TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE 48

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 42.4 bits (98), Expect = 1e-05
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS 38
          RV + G TG     L+ R+L           +
Sbjct: 4  RVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 35

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 41.5 bits (95), Expect = 4e-05
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS 38
           + + G TG +   L   L   G  +   V S
Sbjct: 2  NILLFGKTGQVGWELQRSLAPVGNLIALDVHS 33

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 41.2 bits (94), Expect = 6e-05
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 8  VCVTGGTGFIASWLIMRLLDHGYSVTTTV 36
          + VTGG GFI S ++  L D G +    V
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVV 30

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (90), Expect = 2e-04
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF 52
           V + G +G     L+  +L+ G    VT   R +L  +    K+++ 
Sbjct: 16 SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQ 63

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 35/228 (15%), Positives = 69/228 (30%), Gaps = 20/228 (8%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           +G+V  VTGG   I   ++  LL+ G +V    R     +    +  + L     A  R+
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQA--RV 68

Query: 64  RIFHADLSHPDGFDAAIA------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILK 117
                ++ + +  +  +       G    L       F    P E I+ +  +  L    
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS--PAEHISSKGWHAVLET-- 124

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
                  +    Y        +  +    +                 G + A    LT+ 
Sbjct: 125 ------NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKS 178

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLK 225
            ALE+A   G+ +  + P ++        +    +S        +  K
Sbjct: 179 LALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK 225

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 33/210 (15%), Positives = 66/210 (31%), Gaps = 27/210 (12%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
            G+   +TG +  I     +     G  VT T R+E   E    +    +      +E++
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE----ETKQQILKAGVPAEKI 58

Query: 64  RIFHADLSHPDGFDAAIA------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILK 117
               AD++   G D  I       G   +L      +  D              T  +  
Sbjct: 59  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKL-- 116

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISK----T 173
                   + V+  +            ++++ +         +  S    YA +K     
Sbjct: 117 ------NFQAVIEMTQKTKEHLIKTKGEIVNVSSIV---AGPQAHSGYPYYACAKAALDQ 167

Query: 174 LTERAALEFAEEHGLDLVTLIPSMVVGPFI 203
            T   A++   +HG+ + ++ P  V   F+
Sbjct: 168 YTRCTAIDLI-QHGVRVNSVSPGAVATGFM 196

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 23/154 (14%)

Query: 1   MEEGKGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA 59
           ME  + R+  VTG +G I + +   L+  G  V    R+  + E     +L+      G 
Sbjct: 5   MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE-----ELAAECKSAGY 59

Query: 60  SERLRIFHADLSHPDGFDAAIA-------------GCTGVLHVATPVDFEDKEPEEVITQ 106
              L  +  DLS+ +   +  +                G+    T +       +++   
Sbjct: 60  PGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNV 119

Query: 107 R---AINGTLGILKSCLKSGTVK-RVVYTSSNAA 136
                   T    +S  +       ++  +S + 
Sbjct: 120 NVLALSICTREAYQSMKERNVDDGHIININSMSG 153

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 37/209 (17%), Positives = 57/209 (27%), Gaps = 39/209 (18%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
            GR   VTG    I    +  L   G  V    R++ D           L +L      +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD-----------LDSLVRECPGI 54

Query: 64  RIFHADLSHPDGFDAAIAGCTGV------LHVATPVDFEDKEPEEVITQRAINGTLGILK 117
                DL   +  + A+     V        VA    F +   E       +N       
Sbjct: 55  EPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVN------- 107

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISK----T 173
                    R V   S                   S     R + +    Y  +K     
Sbjct: 108 --------LRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH-SVYCSTKGALDM 158

Query: 174 LTERAALEFAEEHGLDLVTLIPSMVVGPF 202
           LT+  ALE    H + +  + P++V+   
Sbjct: 159 LTKVMALELG-PHKIRVNAVNPTVVMTSM 186

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 21/118 (17%), Positives = 36/118 (30%), Gaps = 19/118 (16%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           +G    VTGG+  I   ++  L   G SV T  R++ +           L        ++
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN-------DCLTQWRSKGFKV 59

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLH-----------VATPVDFEDKEPEEVITQRAIN 110
                DLS        +       H           +    + +D   E+     +IN
Sbjct: 60  EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSIN 117

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.6 bits (81), Expect = 0.003
 Identities = 21/136 (15%), Positives = 41/136 (30%), Gaps = 2/136 (1%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
           E + RV V GG G + S  +       + V +    E + E   S  +    +    +++
Sbjct: 1   EAR-RVLVYGGRGALGSRCVQAFRARNWWVASIDVVE-NEEASASVIVKMTDSFTEQADQ 58

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           +      L      DA +    G            K  + +  Q     T+    +    
Sbjct: 59  VTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL 118

Query: 123 GTVKRVVYTSSNAAVF 138
                +    + AA+ 
Sbjct: 119 KEGGLLTLAGAKAALD 134

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	249
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.96
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.96
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.94
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.94
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.93
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.93
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.93
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.93
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.93
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.93
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.93
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.93
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.92
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.92
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.92
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.92
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.92
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.92
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.92
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.92
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.92
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.92
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.92
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.92
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.92
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.92
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.92
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.91
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.91
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.91
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.91
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.91
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.91
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.91
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.91
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.91
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.9
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.9
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.9
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.9
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.9
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.9
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.9
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.89
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.89
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.89
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.89
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.89
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.89
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.88
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.88
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.88
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.88
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.88
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.88
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.87
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.87
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.86
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.86
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.86
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.85
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.85
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.84
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.84
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.83
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.82
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.82
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.81
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.78
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.77
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.75
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.73
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.7
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.69
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.66
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.65
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.43
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.68
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.55
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.49
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.48
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.47
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.46
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.43
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.41
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.39
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.35
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.26
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.12
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.12
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.11
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.08
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.06
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.05
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.02
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.98
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.97
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.94
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.87
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.85
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.82
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.8
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.78
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.75
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.72
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.7
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.69
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.67
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.66
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.66
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.64
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.62
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.62
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.6
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.56
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.55
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.54
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.54
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.51
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.5
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.41
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.41
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.33
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.31
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.28
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.27
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.26
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.25
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.23
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.22
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.21
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.2
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.19
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.17
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.07
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.04
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.04
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.02
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.0
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.0
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.97
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.97
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.97
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.83
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.76
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.73
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.64
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.6
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.56
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.54
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.52
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.52
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.44
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.44
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.43
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.43
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.33
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.32
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.31
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.3
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.23
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.18
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.17
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.14
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.12
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.09
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.08
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.06
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.05
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.05
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.0
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.0
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.99
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.98
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.97
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.96
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.96
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.94
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.91
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.91
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.88
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.88
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.87
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.85
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.79
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.78
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.76
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.69
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.63
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.62
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.59
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.57
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.57
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.49
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.48
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.34
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.29
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.28
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.28
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.21
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.19
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.16
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.16
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.1
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.06
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.94
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.91
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.88
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.86
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.82
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	94.81
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.77
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.6
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.49
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.45
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.43
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.35
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.34
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.31
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.27
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.02
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.98
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.94
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.87
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.81
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.71
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.68
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.55
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.49
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.25
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	93.24
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.24
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.16
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	93.12
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.09
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.03
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.99
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.94
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	92.9
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.81
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.77
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.65
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.56
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	92.54
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.45
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.31
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.23
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	92.21
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	92.1
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	92.1
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	92.07
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	91.83
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.75
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.3
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	91.26
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	91.19
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	91.07
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.97
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.73
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	90.47
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.3
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	90.16
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	90.02
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	89.93
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	89.77
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	89.69
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	89.48
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	89.05
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	88.97
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.81
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	88.3
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	88.06
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	87.77
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.54
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	87.43
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.41
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	87.04
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	86.86
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	86.57
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	86.42
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	86.33
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.3
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	85.62
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	85.4
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	85.4
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	85.34
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	85.34
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.97
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	84.96
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	84.94
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.74
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.73
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.41
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	84.4
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	84.35
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	84.24
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	84.13
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	83.14
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	83.13
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	83.06
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	82.51
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	82.07
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	82.01
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	81.9
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.33
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	81.06
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	80.94
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	80.78
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	80.14

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.1e-39  Score=271.77  Aligned_cols=227  Identities=17%  Similarity=0.094  Sum_probs=173.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-CCCCCCCeEEEEcCCCChhhHHHHHcC--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG--   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   82 (249)
                      |+|||||||||||++|+++|+++|++|++++|...   .....+.+.+.. ......+++++++|++|.+++.+++++  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRAS---SFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ   78 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCc---ccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccC
Confidence            68999999999999999999999999999999651   011122222222 222345789999999999999999984  


Q ss_pred             CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeeccCCCccccCCCCCCchhHh
Q 025660           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (249)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (249)
                      +|+|+|+|+....  ...++. .++++|+.||.+|+++|++.+  .+.+|||+||+.+|+..  ...+++|+++.     
T Consensus        79 ~d~v~h~aa~~~~~~~~~~~~-~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~--~~~~~~E~~~~-----  150 (357)
T d1db3a_          79 PDEVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLV--QEIPQKETTPF-----  150 (357)
T ss_dssp             CSEEEECCCCCTTTTTTSCHH-HHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTC--CSSSBCTTSCC-----
T ss_pred             CCEEEEeecccccchhhhCHH-HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCC--CCCCcCCCCCC-----
Confidence            6999999998654  345665 789999999999999999864  24579999999876432  34578898874     


Q ss_pred             hhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC--CccHHHHHHHHcCCC-ccccccccccccc
Q 025660          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVRSSLALILGNV-KLKICCVMNRSHT  235 (249)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  235 (249)
                          .|.++|+.||.++|.++..+.+.++++++++||++||||+.....  ..+...+.....+++ .+.++++++.+||
T Consensus       151 ----~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~  226 (357)
T d1db3a_         151 ----YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW  226 (357)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred             ----CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecc
Confidence                367899999999999999999988999999999999999754432  223345555556655 4566889999999


Q ss_pred             chhhHHHhhhhc
Q 025660          236 LFVYAIAFAFAF  247 (249)
Q Consensus       236 i~v~d~a~a~~~  247 (249)
                      +|++|+|.++..
T Consensus       227 ~~v~D~~~a~~~  238 (357)
T d1db3a_         227 GHAKDYVKMQWM  238 (357)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             eeechHHHHHHH
Confidence            999999999854

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-36  Score=252.00  Aligned_cols=220  Identities=18%  Similarity=0.231  Sum_probs=166.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +|+||||||+||||++|+++|+++|++|++++|...       .....+.... ....+.+...|+.+.     ++.++|
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~-------~~~~~~~~~~-~~~~~d~~~~~~~~~-----~~~~~d   67 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT-------GRKRNVEHWI-GHENFELINHDVVEP-----LYIEVD   67 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS-------CCGGGTGGGT-TCTTEEEEECCTTSC-----CCCCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCc-------CCHHHHHHhc-CCCceEEEehHHHHH-----HHcCCC
Confidence            478999999999999999999999999999987541       1112222111 123456666666544     345799


Q ss_pred             EEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           85 GVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        85 ~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|||+|+....  ...++. ..+++|+.|+.+|++++++.+ + ++||+||..+|+..  ...+++|+.....++    .
T Consensus        68 ~VihlAa~~~~~~~~~~~~-~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~vy~~~--~~~~~~e~~~~~~~~----~  138 (312)
T d2b69a1          68 QIYHLASPASPPNYMYNPI-KTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDP--EVHPQSEDYWGHVNP----I  138 (312)
T ss_dssp             EEEECCSCCSHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSC--SSSSBCTTCCCBCCS----S
T ss_pred             EEEECcccCCchhHHhCHH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChheecCC--CCCCCCccccCCCCC----C
Confidence            99999997654  345665 789999999999999999988 4 89999999976543  234566654433221    2


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHH-HHHHHHcCCCcccccccccccccchhhHH
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR-SSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                      .|.+.|+.||.++|.+++.+++.++++++++||++||||+.......++. ++.+...|++...++++.+.++|+|++|+
T Consensus       139 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~  218 (312)
T d2b69a1         139 GPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL  218 (312)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHH
Confidence            46789999999999999999998999999999999999987665445554 44455555555456899999999999999


Q ss_pred             Hhhhh
Q 025660          242 AFAFA  246 (249)
Q Consensus       242 a~a~~  246 (249)
                      ++++.
T Consensus       219 ~~~~~  223 (312)
T d2b69a1         219 VNGLV  223 (312)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99974

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.3e-36  Score=257.26  Aligned_cols=229  Identities=18%  Similarity=0.153  Sum_probs=168.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEE-EEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTT-TVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      |+|||||||||||++|+++|+++|++|++ +++...      ......+..... ..+++++++|++|++.+.++++  +
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~------~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~~   73 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTY------AGNLESLSDISE-SNRYNFEHADICDSAEITRIFEQYQ   73 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCT------TCCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCc------cccHHHHHhhhh-cCCcEEEEccCCCHHHHHHHHHhCC
Confidence            47999999999999999999999997554 444331      111222333322 3478999999999999999987  5


Q ss_pred             CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcC--------CcceEEEEcccceeeccCCCccccCCCCC
Q 025660           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSG--------TVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (249)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~--------~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (249)
                      +|+|||+||....  ...++. .++++|+.||.+++++|++.+        .+++||++||..+|+....  .+..|+..
T Consensus        74 ~d~VihlAa~~~~~~~~~~p~-~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~--~~~~~~~~  150 (361)
T d1kewa_          74 PDAVMHLAAESHVDRSITGPA-AFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPH--PDEVENSV  150 (361)
T ss_dssp             CSEEEECCSCCCHHHHHHCTH-HHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCC--GGGSCTTS
T ss_pred             CCEEEECccccchhhHHhCHH-HHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCcc--CCcccccc
Confidence            8999999997553  223555 789999999999999998753        1459999999998765432  11111111


Q ss_pred             C-chhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHH-HHHHHHcCCCcccccccc
Q 025660          153 S-DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR-SSLALILGNVKLKICCVM  230 (249)
Q Consensus       153 ~-~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  230 (249)
                      . ..........|.+.|+.||.++|.++..+.+.++++++++||++||||+...  ..++. .+.....+++...+++++
T Consensus       151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~g~~~~v~g~g~  228 (361)
T d1kewa_         151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKGD  228 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCEEEETTSC
T ss_pred             CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc--CcHHHHHHHHHHcCCCcEEeCCCC
Confidence            0 0011112245789999999999999999999889999999999999998654  23444 444455555444568999


Q ss_pred             cccccchhhHHHhhhh
Q 025660          231 NRSHTLFVYAIAFAFA  246 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~  246 (249)
                      +.|+|+|++|+|+++.
T Consensus       229 ~~r~~i~v~D~a~ai~  244 (361)
T d1kewa_         229 QIRDWLYVEDHARALH  244 (361)
T ss_dssp             CEEEEEEHHHHHHHHH
T ss_pred             eEEeCEEHHHHHHHHH
Confidence            9999999999999974

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-36  Score=252.68  Aligned_cols=227  Identities=19%  Similarity=0.125  Sum_probs=171.7

Q ss_pred             CeE-EEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC--CCCCeEEEEcCCCChhhHHHHHc-
Q 025660            6 GRV-CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         6 ~~v-lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      |+| ||||||||||++|+++|+++||+|++++|...   .......+.+.....  ...+++++.+|++|++.+.+++. 
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   77 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS---SFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE   77 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS---SCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCc---ccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh
Confidence            467 99999999999999999999999999999751   011122222222111  12468999999999999999987 


Q ss_pred             -CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcC--CcceEEEEcccceeeccCCCccccCCCCCCchh
Q 025660           82 -GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (249)
Q Consensus        82 -~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (249)
                       ++++++|+|+....  ...++. .++++|+.||.++++++++.+  ...+||++||+.+|+.  ....+++|++|.   
T Consensus        78 ~~~~~v~~~~a~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~--~~~~~~~E~~~~---  151 (347)
T d1t2aa_          78 VKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK--VQEIPQKETTPF---  151 (347)
T ss_dssp             HCCSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCS--CSSSSBCTTSCC---
T ss_pred             cccceeeeeeeccccchhhccch-hhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecC--CCCCCCCCCCCC---
Confidence             57899999987544  223333 678999999999999999875  1358999999997653  234578888874   


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC--CccHHHHHHHHcCCC-ccccccccccc
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVRSSLALILGNV-KLKICCVMNRS  233 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~  233 (249)
                            .|.+.|+.||.++|+++..+.+.++++++++||+++|||......  ......+.....+.. ...++++++.+
T Consensus       152 ------~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r  225 (347)
T d1t2aa_         152 ------YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  225 (347)
T ss_dssp             ------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCccee
Confidence                  378899999999999999998888999999999999999754331  122233444444444 55668899999


Q ss_pred             ccchhhHHHhhhhc
Q 025660          234 HTLFVYAIAFAFAF  247 (249)
Q Consensus       234 ~~i~v~d~a~a~~~  247 (249)
                      +|+|++|++.++.+
T Consensus       226 ~~i~v~D~~~a~~~  239 (347)
T d1t2aa_         226 DWGHAKDYVEAMWL  239 (347)
T ss_dssp             CCEEHHHHHHHHHH
T ss_pred             eeeEecHHHHHHHH
Confidence            99999999999864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=9.3e-36  Score=251.39  Aligned_cols=226  Identities=20%  Similarity=0.156  Sum_probs=179.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCC--CCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP--GASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|+|||||||||||++|+++|+++||+|++++|...    ........+....  .....++++.+|+.|...+.....
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFAT----GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCC----cchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc
Confidence            4679999999999999999999999999999998541    0111122221111  112468999999999999999999


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      .++.|+|+++....  ...++. ..+++|+.|+.+|+++|++.+ +++||++||..+|+..  ...+++|++|.      
T Consensus        91 ~~~~v~~~~a~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~--~~~~~~E~~~~------  160 (341)
T d1sb8a_          91 GVDYVLHQAALGSVPRSINDPI-TSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDH--PGLPKVEDTIG------  160 (341)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTC--CCSSBCTTCCC------
T ss_pred             cccccccccccccccccccCcc-chhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCC--CCCCccCCCCC------
Confidence            99999999987543  233444 788999999999999999998 8899999999986543  34578898874      


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHH-HHHHHHcCCCcccccccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVR-SSLALILGNVKLKICCVMNRSHTL  236 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i  236 (249)
                         .|.+.|+.+|.++|.++..+.+.++++++++||++||||+..+.  ...++. .+...+.|.+...++++.+.++|+
T Consensus       161 ---~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i  237 (341)
T d1sb8a_         161 ---KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  237 (341)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEE
Confidence               47899999999999999999988899999999999999987654  234444 444555565555568899999999


Q ss_pred             hhhHHHhhhh
Q 025660          237 FVYAIAFAFA  246 (249)
Q Consensus       237 ~v~d~a~a~~  246 (249)
                      |++|++.|+.
T Consensus       238 ~v~D~~~a~~  247 (341)
T d1sb8a_         238 YIENTVQANL  247 (341)
T ss_dssp             EHHHHHHHHH
T ss_pred             EEeccchhhh
Confidence            9999999864

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.2e-35  Score=251.21  Aligned_cols=234  Identities=15%  Similarity=0.084  Sum_probs=173.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +||+|||||||||||++|+++|+++|++|.++.++.....    .....+...  ...+++++.+|++|.+.+.+++..+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~----~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~   74 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA----GNKANLEAI--LGDRVELVVGDIADAELVDKLAAKA   74 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTT----CCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcc----ccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhh
Confidence            4679999999999999999999999998777766531100    111111111  1247899999999999999999999


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC-CccccCCCCCCchhHhhh
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK-DVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~-~~~~~~e~~~~~~~~~~~  160 (249)
                      +.|+|+|+....  ...++. ..+++|+.|+.++++++...+  .++|++||..+|+..+. ...+..+..+........
T Consensus        75 ~~v~~~a~~~~~~~~~~~~~-~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~  151 (346)
T d1oc2a_          75 DAIVHYAAESHNDNSLNDPS-PFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET  151 (346)
T ss_dssp             SEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred             hhhhhhhhcccccchhhCcc-cceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCC
Confidence            999999997654  223444 778999999999999999998  58999999987753211 111111111111111112


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhH
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                      ...|.+.|+.+|.++|.+++.+.+.++++++++||++||||..... ..+...+.....+.+...++++.+.++|+|++|
T Consensus       152 ~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D  230 (346)
T d1oc2a_         152 NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTND  230 (346)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhh
Confidence            2457889999999999999999888899999999999999976432 234455666667777667789999999999999


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      +|.++.+
T Consensus       231 ~a~a~~~  237 (346)
T d1oc2a_         231 HSTGVWA  237 (346)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999754

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=2.7e-35  Score=246.72  Aligned_cols=220  Identities=23%  Similarity=0.253  Sum_probs=171.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEE------EEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVT------TTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~------~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+|||||||||||++|+++|+++|++|.      .+++...     . .....+... ....+++++.+|+.+.+.....
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~-----~-~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~   73 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTY-----A-GNRANLAPV-DADPRLRFVHGDIRDAGLLARE   73 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCT-----T-CCGGGGGGG-TTCTTEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCc-----c-ccHhHhhhh-hcCCCeEEEEeccccchhhhcc
Confidence            4799999999999999999999998654      4443320     0 111112221 2235789999999999999999


Q ss_pred             HcCCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhH
Q 025660           80 IAGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (249)
                      ...+|.|+|+|+....  ...++. ..+++|+.|+.+|+++|.+.+ +++||++||+.+|+..  ...+++|+++.    
T Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~--~~~~~~E~~~~----  145 (322)
T d1r6da_          74 LRGVDAIVHFAAESHVDRSIAGAS-VFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSI--DSGSWTESSPL----  145 (322)
T ss_dssp             TTTCCEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCC--SSSCBCTTSCC----
T ss_pred             ccccceEEeecccccccccccchH-HHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCC--CCCCCCCCCCC----
Confidence            9999999999987544  122333 778999999999999999998 8999999999976544  34468888874    


Q ss_pred             hhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc-cccccccccccc
Q 025660          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL-KICCVMNRSHTL  236 (249)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i  236 (249)
                           .|.+.|+.||..+|.+++.+.++++++++++||++||||+...  ..++..+.+....++.+ .++++++.++|+
T Consensus       146 -----~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i  218 (322)
T d1r6da_         146 -----EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (322)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc--CcHHHHHHHHHHcCCCcEEecCCCeEEccE
Confidence                 3788999999999999999998899999999999999998654  24555554444444444 458899999999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|+|.++.+
T Consensus       219 ~v~D~a~ai~~  229 (322)
T d1r6da_         219 HTDDHCRGIAL  229 (322)
T ss_dssp             EHHHHHHHHHH
T ss_pred             EHHHHHHHHHH
Confidence            99999999854

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.5e-35  Score=247.05  Aligned_cols=225  Identities=15%  Similarity=0.085  Sum_probs=170.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +.|+|||||||||||++|+++|+++||+|++++|...       ..      ........++..+|+++.+.+.++++++
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~-------~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN-------EH------MTEDMFCDEFHLVDLRVMENCLKVTEGV   80 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-------SS------SCGGGTCSEEEECCTTSHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCc-------cc------hhhhcccCcEEEeechhHHHHHHHhhcC
Confidence            5578999999999999999999999999999988751       10      0111124578899999999999999999


Q ss_pred             CEEEEccccCCC---CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           84 TGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        84 d~vih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      |.|||+|+....   ....+. .....|+.++.++++++++.+ +++||++||..+++....  .+.+|......  ...
T Consensus        81 d~Vih~a~~~~~~~~~~~~~~-~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~--~~~~~~~~~~~--e~~  154 (363)
T d2c5aa1          81 DHVFNLAADMGGMGFIQSNHS-VIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQ--LETTNVSLKES--DAW  154 (363)
T ss_dssp             SEEEECCCCCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGS--SSSSSCEECGG--GGS
T ss_pred             CeEeecccccccccccccccc-cccccccchhhHHHHhHHhhC-cccccccccccccccccc--ccccccccccc--cCC
Confidence            999999987655   234444 788999999999999999999 899999999987664432  22222211100  001


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCc--c-HH-HHHHHHcCCCcccccccccccccc
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAG--S-VR-SSLALILGNVKLKICCVMNRSHTL  236 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~~i  236 (249)
                      ...|.+.|+.||.++|.+++.+.+.++++++++||+++|||........  . .. .............++++.+.|+|+
T Consensus       155 ~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  234 (363)
T d2c5aa1         155 PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFT  234 (363)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEe
Confidence            1346789999999999999999988899999999999999986543221  1 12 223333344456778899999999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|++.++.+
T Consensus       235 ~v~D~~~~~~~  245 (363)
T d2c5aa1         235 FIDECVEGVLR  245 (363)
T ss_dssp             EHHHHHHHHHH
T ss_pred             ehhHHHHHHHH
Confidence            99999998753

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=8.1e-35  Score=243.29  Aligned_cols=223  Identities=18%  Similarity=0.120  Sum_probs=173.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--C
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--C   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~   83 (249)
                      |+|||||||||||++|+++|+++||+|++++|...      ......+..+.. ..+++++++|++|.+++.+.+..  .
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~------~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS------SDTRWRLRELGI-EGDIQYEDGDMADACSVQRAVIKAQP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS------SCCCHHHHHTTC-GGGEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCC------cccHHHHHHhcc-cCCcEEEEccccChHHhhhhhccccc
Confidence            68999999999999999999999999999999761      112223333221 23689999999999999988874  6


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      ++++|+|+....  ...++. .++..|+.|+.++++++++.+..++|++.||..++ +. ....+.+|++|.        
T Consensus        74 ~~~~~~a~~~~~~~~~~~~~-~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~-~~-~~~~~~~E~~~~--------  142 (321)
T d1rpna_          74 QEVYNLAAQSFVGASWNQPV-TTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMF-GL-IQAERQDENTPF--------  142 (321)
T ss_dssp             SEEEECCSCCCHHHHTTSHH-HHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGG-CS-CSSSSBCTTSCC--------
T ss_pred             cccccccccccccccccchH-HHHhhhhhchHHHHHHHHHhCCCcccccccchhhc-Cc-ccCCCCCCCCCc--------
Confidence            788888887554  234444 88999999999999999998855678888887643 33 334567788764        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC--CccHHHHHHHHcCCC-cccccccccccccchh
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVRSSLALILGNV-KLKICCVMNRSHTLFV  238 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v  238 (249)
                       .|.+.|+.+|.++|.++..+...++++++++||+++|||......  +.+...+.+...++. .+.++++++.|+|+|+
T Consensus       143 -~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v  221 (321)
T d1rpna_         143 -YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA  221 (321)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH
T ss_pred             -cccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEe
Confidence             478899999999999999999888999999999999999754331  123345556666665 4567899999999999


Q ss_pred             hHHHhhhhc
Q 025660          239 YAIAFAFAF  247 (249)
Q Consensus       239 ~d~a~a~~~  247 (249)
                      +|+|+++.+
T Consensus       222 ~D~~~~~~~  230 (321)
T d1rpna_         222 GDYVEAMWL  230 (321)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999854

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-34  Score=241.82  Aligned_cols=223  Identities=19%  Similarity=0.184  Sum_probs=166.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+|||||||||||++|+++|+++|++|++++|...    .........+...  ..++.++++|++|.+.+.++++  ++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~----~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~   74 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCN----SKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCC----cchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhccCC
Confidence            47999999999999999999999999999987541    0111122221111  1368999999999999999998  69


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+||....  ...++. ..+++|+.||++++++|++.+ +++||++||..+|+....  .+..|..+        .
T Consensus        75 d~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~--~~~~e~~~--------~  142 (338)
T d1udca_          75 DTVIHFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPK--IPYVESFP--------T  142 (338)
T ss_dssp             SEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCS--SSBCTTSC--------C
T ss_pred             CEEEECCCccchhhHHhCHH-HHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccc--cccccccc--------c
Confidence            999999997543  223454 889999999999999999999 999999999987644322  22333332        1


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHH-cCCcEEEeecCeEeCCCCCCC--------CCccHHHHHHHHcCC-Ccccc-----
Q 025660          162 DSWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGN-VKLKI-----  226 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~-~~~~~-----  226 (249)
                      ..|.+.|+.+|..+|.++..+... ++++++++||+++|||.....        ...++..+.....+. +++.+     
T Consensus       143 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~  222 (338)
T d1udca_         143 GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCS
T ss_pred             CCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCc
Confidence            346889999999999999876655 489999999999999976532        123445555555443 34433     


Q ss_pred             --cccccccccchhhHHHhhhh
Q 025660          227 --CCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       227 --~~~~~~~~~i~v~d~a~a~~  246 (249)
                        .++.+.+||+|++|++.++.
T Consensus       223 ~~~~g~~~rd~i~v~D~~~~~~  244 (338)
T d1udca_         223 PTEDGTGVRDYIHVMDLADGHV  244 (338)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHH
T ss_pred             ccCCCCceeeEEEEeehhhhcc
Confidence              24778899999999997653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.8e-34  Score=247.87  Aligned_cols=239  Identities=15%  Similarity=0.105  Sum_probs=164.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC------------CCcccCCchhhhhhccCCCCCCCeEEEEcCCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE------------LDPEHRNSKDLSFLKNLPGASERLRIFHADLSH   72 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~   72 (249)
                      +|+|||||||||||++|+++|+++||+|+++|.-.            ..+..............  .+.+++++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL--TGKSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH--HCCCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh--cCCCcEEEEccCCC
Confidence            47899999999999999999999999999997210            00000000111111111  12368999999999


Q ss_pred             hhhHHHHHc--CCCEEEEccccCCC--CCCC--hHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCC---
Q 025660           73 PDGFDAAIA--GCTGVLHVATPVDF--EDKE--PEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD---  143 (249)
Q Consensus        73 ~~~~~~~~~--~~d~vih~a~~~~~--~~~~--~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~---  143 (249)
                      .+.+.++++  ++|+|+|+||....  ...+  ....++.+|+.||.+++++|++.+..+++++.||..+++.....   
T Consensus        79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~  158 (393)
T d1i24a_          79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE  158 (393)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred             HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccc
Confidence            999999997  57999999997544  1112  12267899999999999999998845577888877654432211   


Q ss_pred             -ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC---------------C
Q 025660          144 -VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK---------------F  207 (249)
Q Consensus       144 -~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~---------------~  207 (249)
                       ....+++...+.  ......|.+.|+.||.++|.++..+.+.++++++++||++||||.....               .
T Consensus       159 ~~~~~~~~~~~~~--~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  236 (393)
T d1i24a_         159 GYITITHNGRTDT--LPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF  236 (393)
T ss_dssp             SEEEEEETTEEEE--EECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred             ccccccccccccc--cccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccc
Confidence             011111111000  0112356789999999999999999988999999999999999986432               1


Q ss_pred             CccHHHHH-HHHcCCCcccccccccccccchhhHHHhhhhc
Q 025660          208 AGSVRSSL-ALILGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       208 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ..++..+. +...+.+...++++.+.|||+|++|++.++.+
T Consensus       237 ~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~  277 (393)
T d1i24a_         237 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEI  277 (393)
T ss_dssp             CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred             ccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHH
Confidence            12334444 44445444455899999999999999999754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.1e-34  Score=239.14  Aligned_cols=227  Identities=19%  Similarity=0.133  Sum_probs=169.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC--CCCCeEEEEcCCCChhhHHHHHc-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +|++||||||||||++|+++|+++||+|++++|...   .....+...+.....  ....++++.+|+++.+.+.+.++ 
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~   77 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS---NFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV   77 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS---SCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCc---ccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh
Confidence            478999999999999999999999999999999651   011123333322111  12467899999999999999886 


Q ss_pred             -CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcC----CcceEEEEcccceeeccCCCccccCCCCCCc
Q 025660           82 -GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSG----TVKRVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (249)
Q Consensus        82 -~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (249)
                       ++|+|||+|+....  ..+++. .....|+.++.++++++++..    ...++++.||..++.   ....+++|++|. 
T Consensus        78 ~~~D~Vih~Aa~~~~~~~~~~p~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~---~~~~~~~E~~~~-  152 (339)
T d1n7ha_          78 IKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFG---STPPPQSETTPF-  152 (339)
T ss_dssp             HCCSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGT---TSCSSBCTTSCC-
T ss_pred             hccchhhhccccccccccccCcc-ccccccccccchhhhhhhhcccccccceeeeecccceecc---cCCCCCCCCCCC-
Confidence             58999999998654  223454 788999999999999987542    134677777766432   224567888874 


Q ss_pred             hhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC--CccHHHHHHHHcCCC-ccccccccc
Q 025660          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVRSSLALILGNV-KLKICCVMN  231 (249)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~  231 (249)
                              .|.+.|+.+|..+|.++..+.+.++++++++||++||||......  ..+...+.....+.. .+.++++.+
T Consensus       153 --------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~  224 (339)
T d1n7ha_         153 --------HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQA  224 (339)
T ss_dssp             --------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTC
T ss_pred             --------CCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCc
Confidence                    378899999999999999999988999999999999999754331  122233444444544 456688999


Q ss_pred             ccccchhhHHHhhhhc
Q 025660          232 RSHTLFVYAIAFAFAF  247 (249)
Q Consensus       232 ~~~~i~v~d~a~a~~~  247 (249)
                      .|||+|++|+|.++.+
T Consensus       225 ~rd~~~v~D~a~~~~~  240 (339)
T d1n7ha_         225 SRDWGFAGDYVEAMWL  240 (339)
T ss_dssp             EEECEEHHHHHHHHHH
T ss_pred             cccceeeehHHHHHHH
Confidence            9999999999998754

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.4e-34  Score=237.72  Aligned_cols=208  Identities=16%  Similarity=0.115  Sum_probs=162.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      +|+|||||||||||++|+++|+++|+.|+++++..                           .+|+.+.+.+.++++  .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------------~~~~~~~~~~~~~~~~~~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFASER   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------------hccccCHHHHHHHHhhcC
Confidence            56899999999999999999999999998776554                           268999999999886  5


Q ss_pred             CCEEEEccccCCC---CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           83 CTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        83 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      +|.|+|+|+....   ...++. .++.+|+.||.+|+++|.+.+ +++|||+||.++|+..  ...+++|+.+.+..+  
T Consensus        55 ~d~v~~~a~~~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~--~~~~~~E~~~~~~~~--  128 (315)
T d1e6ua_          55 IDQVYLAAAKVGGIVANNTYPA-DFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKL--AKQPMAESELLQGTL--  128 (315)
T ss_dssp             CSEEEECCCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTT--CCSSBCGGGTTSSCC--
T ss_pred             CCEEEEcchhccccccchhhHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCC--CCCCccCCccccCCC--
Confidence            8999999987654   122333 678899999999999999998 8999999999987543  344677776554322  


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCC--ccHH-----HHHHHHcCCC-ccccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA--GSVR-----SSLALILGNV-KLKICCVMN  231 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~--~~~~-----~~~~~~~~~~-~~~~~~~~~  231 (249)
                        ..|.+.|+.||.++|.++..+.++++++++++||++||||+......  .+..     .......++. ...++++.+
T Consensus       129 --~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  206 (315)
T d1e6ua_         129 --EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTP  206 (315)
T ss_dssp             --CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCC
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCce
Confidence              22356799999999999999999899999999999999998654321  1111     2223333333 455678899


Q ss_pred             ccccchhhHHHhhhhc
Q 025660          232 RSHTLFVYAIAFAFAF  247 (249)
Q Consensus       232 ~~~~i~v~d~a~a~~~  247 (249)
                      .++|+|++|++.++.+
T Consensus       207 ~~~~~~v~d~~~~~~~  222 (315)
T d1e6ua_         207 MREFLHVDDMAAASIH  222 (315)
T ss_dssp             EECEEEHHHHHHHHHH
T ss_pred             EEEEEEeehhHHHHHH
Confidence            9999999999998743

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-33  Score=236.86  Aligned_cols=222  Identities=20%  Similarity=0.221  Sum_probs=170.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHH-HHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA-AIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~   83 (249)
                      |||||||||||||++|+++|+++|+ +|+++++..        .....+.+.    .+++++.+|+++.+.+.+ +.+++
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~--------~~~~~~~~~----~~~~~i~~Di~~~~~~~~~~~~~~   68 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS--------DAISRFLNH----PHFHFVEGDISIHSEWIEYHVKKC   68 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC--------GGGGGGTTC----TTEEEEECCTTTCSHHHHHHHHHC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCC--------cchhhhccC----CCeEEEECccCChHHHHHHHHhCC
Confidence            4799999999999999999999995 899998876        333333322    478999999998866555 66789


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|+|+|+....  ...++. ..+.+|+.|+.++++++.+.+  .+++++||+.+|+.....  ..+|..+..  ...+.
T Consensus        69 d~Vih~a~~~~~~~~~~~~~-~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~~~~~~--~~~~~~~~~--~~~~~  141 (342)
T d2blla1          69 DVVLPLVAIATPIEYTRNPL-RVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDK--YFDEDHSNL--IVGPV  141 (342)
T ss_dssp             SEEEECBCCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCS--SBCTTTCCC--BCCCT
T ss_pred             CccccccccccccccccCCc-ccccccccccccccccccccc--cccccccccccccccccc--ccccccccc--ccccc
Confidence            999999998654  223343 789999999999999999987  466788888876654332  222222111  01123


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCC-------ccHHHHHHHHcCCCcccccccccccc
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA-------GSVRSSLALILGNVKLKICCVMNRSH  234 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (249)
                      ..|.+.|+.||.++|.++..+.+.++++++++||+.+|||.......       ....++.+.+.|++...++++++.++
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~  221 (342)
T d2blla1         142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  221 (342)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred             CCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeee
Confidence            45678999999999999999999889999999999999997654311       12345667777777777899999999


Q ss_pred             cchhhHHHhhhh
Q 025660          235 TLFVYAIAFAFA  246 (249)
Q Consensus       235 ~i~v~d~a~a~~  246 (249)
                      |+|++|+|+++.
T Consensus       222 ~i~v~D~~~a~~  233 (342)
T d2blla1         222 FTDIRDGIEALY  233 (342)
T ss_dssp             CEEHHHHHHHHH
T ss_pred             ecccccccceee
Confidence            999999999874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=1.7e-33  Score=237.73  Aligned_cols=233  Identities=27%  Similarity=0.369  Sum_probs=171.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc---CCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN---LPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .+|+||||||+||||++|+++|+++|++|++++|+.        .+...+..   ..........+.+|++|.+++.+++
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA--------SKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCc--------hhHHHHHHhhhccccccccEEEeccccchhhhhhhc
Confidence            468999999999999999999999999999999986        33333321   1222233456889999999999999


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC--CccccCCCCCCchhH-
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK--DVDMMDETFWSDVDY-  157 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~~e~~~~~~~~-  157 (249)
                      .++|+|+|+|+..... .++. ..+..|+.||.+++++|.+.+.+++||++||+.+++....  .....+|+.+..... 
T Consensus        82 ~~~~~v~~~a~~~~~~-~~~~-~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~  159 (342)
T d1y1pa1          82 KGAAGVAHIASVVSFS-NKYD-EVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID  159 (342)
T ss_dssp             TTCSEEEECCCCCSCC-SCHH-HHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred             ccchhhhhhccccccc-cccc-ccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccc
Confidence            9999999999987653 3333 7788999999999999998755899999999865443322  233445544432222 


Q ss_pred             ------hhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCCCCC-CccHHHHHHHHcCCCcccccc
Q 025660          158 ------IRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKF-AGSVRSSLALILGNVKLKICC  228 (249)
Q Consensus       158 ------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  228 (249)
                            .+....|.+.|+.||..+|.++..+.+.+  +++++++||+.+|||...+.. ...+..+.+.+..+.......
T Consensus       160 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~  239 (342)
T d1y1pa1         160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA  239 (342)
T ss_dssp             HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHH
T ss_pred             ccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccC
Confidence                  11223356789999999999999988765  578899999999999765442 223444444444555444556


Q ss_pred             cccccccchhhHHHhhhh
Q 025660          229 VMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       229 ~~~~~~~i~v~d~a~a~~  246 (249)
                      +.+.++|+|++|+|+++.
T Consensus       240 ~~~~~~~v~v~Dva~~~i  257 (342)
T d1y1pa1         240 LMPPQYYVSAVDIGLLHL  257 (342)
T ss_dssp             TCCSEEEEEHHHHHHHHH
T ss_pred             CccceeeeeHHHHHHHHH
Confidence            777889999999998864

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.1e-33  Score=236.43  Aligned_cols=218  Identities=17%  Similarity=0.186  Sum_probs=157.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |.|||||||||||++|+++|+++|++|+++++...    ...+........  ...+++++++|++|.+.+..+++  ++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~----~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSN----STYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEYKI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCC----cchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhccCC
Confidence            57999999999999999999999999999987541    001111111111  12367899999999999999887  68


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCC--CccccCCCCCCchhHhh
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK--DVDMMDETFWSDVDYIR  159 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~~e~~~~~~~~~~  159 (249)
                      |+|||+||....  ...++. .+..+|+.++.+|+++|++.+ +++||++||..+|+....  ...+++|+.+.      
T Consensus        76 d~VihlAa~~~~~~~~~~~~-~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~------  147 (347)
T d1z45a2          76 DSVIHFAGLKAVGESTQIPL-RYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPL------  147 (347)
T ss_dssp             CEEEECCSCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC------
T ss_pred             CEEEEccccccccccccCcc-cccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCC------
Confidence            999999998653  233444 788999999999999999998 899999999998865433  34457777653      


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHH--cCCcEEEeecCeEeCCCCCCC--------CCccHHHHHHHHcCC-Ccc-ccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGN-VKL-KIC  227 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~-~~~-~~~  227 (249)
                         .|.+.|+.||.++|.++..+.+.  .+++++++||+++||+.....        ...++..+.....+. +++ .++
T Consensus       148 ---~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g  224 (347)
T d1z45a2         148 ---GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFG  224 (347)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-
T ss_pred             ---CCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeC
Confidence               36789999999999999998764  479999999999999865432        123455555555544 344 345


Q ss_pred             ccccccccchhhH
Q 025660          228 CVMNRSHTLFVYA  240 (249)
Q Consensus       228 ~~~~~~~~i~v~d  240 (249)
                      ++.+.+++++++|
T Consensus       225 ~~~~~~~~~~~~d  237 (347)
T d1z45a2         225 DDYDSRDGTPIRD  237 (347)
T ss_dssp             -----CCSSCEEC
T ss_pred             CCccccCCceeee
Confidence            6555555444444

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-32  Score=230.26  Aligned_cols=227  Identities=17%  Similarity=0.164  Sum_probs=166.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCccc--CCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH--RNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      |||||||||||||++|+++|+++|++|++++|.......  ......+.+....  ..+++++.+|++|.+.+.+++.. 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc--CCCcEEEEeecccccccccccccc
Confidence            689999999999999999999999999999863211000  1112222222221  24789999999999999998864 


Q ss_pred             -CCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                       +++++|+||..+.  ...++. ..++.|+.|+.++++++++.+ +++|+++||..+++...... ...+..        
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p~-~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~-~~~~~~--------  149 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKPL-DYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLP-LDEAHP--------  149 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSS-BCTTSC--------
T ss_pred             ccccccccccccCcHhhHhCHH-HHHHhhhcccccccchhhhcC-cccccccccceeeecccccc-cccccc--------
Confidence             5789999997654  233555 788999999999999999999 89999999999776543322 122211        


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHH-cCCcEEEeecCeEeCCCCCCC--------CCccHHHHHHHHcCC-Ccc-----
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGN-VKL-----  224 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~vrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~-~~~-----  224 (249)
                       ...|.++|+.+|..+|..+..+.+. .+++.+++||+.+|||.....        ...++..+.....+. ..+     
T Consensus       150 -~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~  228 (346)
T d1ek6a_         150 -TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGN  228 (346)
T ss_dssp             -CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECS
T ss_pred             -ccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCC
Confidence             1345788999999999999988765 489999999999999975432        223344555544443 232     


Q ss_pred             --cccccccccccchhhHHHhhhh
Q 025660          225 --KICCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       225 --~~~~~~~~~~~i~v~d~a~a~~  246 (249)
                        ...++.+.|||+|++|+|.++.
T Consensus       229 ~~~~~~g~~~Rdfi~v~D~a~~~~  252 (346)
T d1ek6a_         229 DYDTEDGTGVRDYIHVVDLAKGHI  252 (346)
T ss_dssp             CSSSSSSSCEECEEEHHHHHHHHH
T ss_pred             cccCCCCCeeEeEEEEEeccchhh
Confidence              3356778899999999997763

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=5.7e-32  Score=228.85  Aligned_cols=224  Identities=20%  Similarity=0.159  Sum_probs=174.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +.|+|||||||||||++|+++|+++||+|++++|+.        .....+.+......+++++.+|++|++++.++++  
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~--------~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~   78 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTA--------PTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF   78 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------SSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC--------CccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc
Confidence            468999999999999999999999999999999987        2222221111222468999999999999999987  


Q ss_pred             CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhh
Q 025660           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (249)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (249)
                      .+|+|+|+|+....  ...++. ..+.+|+.++.++++++++.+....+++.||.. ++.......+.+|+.+..     
T Consensus        79 ~~~~v~~~aa~~~~~~~~~~~~-~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~-----  151 (356)
T d1rkxa_          79 QPEIVFHMAAQPLVRLSYSEPV-ETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDK-CYDNKEWIWGYRENEAMG-----  151 (356)
T ss_dssp             CCSEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGG-GBCCCCSSSCBCTTSCBC-----
T ss_pred             hhhhhhhhhccccccccccCCc-cccccccccchhhhhhhhccccccccccccccc-cccccccccccccccccC-----
Confidence            57999999997544  223444 789999999999999999987344555555544 555555566677776533     


Q ss_pred             hcCCCCchHHHHHHHHHHHHHHHHHH---------cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccc
Q 025660          160 KLDSWGKSYAISKTLTERAALEFAEE---------HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVM  230 (249)
Q Consensus       160 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---------~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (249)
                          |.+.|+.+|...|..+..+...         +++.++++||+++|||+... ...++..+.+...++..+.++.+.
T Consensus       152 ----p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~-~~~~i~~~~~~~~~~~~~~~~~~~  226 (356)
T d1rkxa_         152 ----GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA-LDRIVPDILRAFEQSQPVIIRNPH  226 (356)
T ss_dssp             ----CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC-SSCHHHHHHHHHHTTCCEECSCTT
T ss_pred             ----CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcch-hhHHHHHHHHHHhCCCceEEeecc
Confidence                6788999999999998877653         36889999999999998643 345666777778888888889999


Q ss_pred             cccccchhhHHHhhhhc
Q 025660          231 NRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       231 ~~~~~i~v~d~a~a~~~  247 (249)
                      +.++|+|++|++.|+..
T Consensus       227 ~~~~~~~v~D~~~a~~~  243 (356)
T d1rkxa_         227 AIRPWQHVLEPLSGYLL  243 (356)
T ss_dssp             CEECCEETHHHHHHHHH
T ss_pred             ccccccccccccchhhh
Confidence            99999999999999653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=9e-32  Score=230.24  Aligned_cols=231  Identities=19%  Similarity=0.156  Sum_probs=163.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHH-CCCeEEEEEcCCCCcc----cCCch-hhhhhcc-----CCCCCCCeEEEEcCCCCh
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPE----HRNSK-DLSFLKN-----LPGASERLRIFHADLSHP   73 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~----~~~~~-~~~~l~~-----~~~~~~~~~~~~~Dl~~~   73 (249)
                      .|+|||||||||||++|+++|++ .||+|+++++-.....    ....+ ....+..     .........++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            35899999999999999999997 5899999985210000    00000 1111111     111234678999999999


Q ss_pred             hhHHHHHc---CCCEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCC-----
Q 025660           74 DGFDAAIA---GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD-----  143 (249)
Q Consensus        74 ~~~~~~~~---~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~-----  143 (249)
                      +.+.++++   .+|+|+|+|+....  ...++. ..++.|+.++.++++++++.+ +++++++||..++......     
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~-~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~  159 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPL-KYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTN  159 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----C
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccc-cccccccccccccchhhhccC-Cccccccccccccccccccccccc
Confidence            99999986   57999999997654  222333 788999999999999999998 8899999998876543322     


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCc-------cHHH---
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAG-------SVRS---  213 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~-------~~~~---  213 (249)
                      ..++.|+++         ..|.+.|+.+|..+|.++..+.+.++++++++||+++|||+.......       +...   
T Consensus       160 ~~~~~e~~~---------~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~  230 (383)
T d1gy8a_         160 AEPIDINAK---------KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG  230 (383)
T ss_dssp             CCCBCTTSC---------CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHH
T ss_pred             ccccccccC---------CCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHH
Confidence            223444443         457899999999999999999988899999999999999997654221       1111   


Q ss_pred             -HHHHHcCC------------C-------cccccccccccccchhhHHHhhhh
Q 025660          214 -SLALILGN------------V-------KLKICCVMNRSHTLFVYAIAFAFA  246 (249)
Q Consensus       214 -~~~~~~~~------------~-------~~~~~~~~~~~~~i~v~d~a~a~~  246 (249)
                       +......+            .       ....++|.+.|||+|++|+|+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~  283 (383)
T d1gy8a_         231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHI  283 (383)
T ss_dssp             HHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHH
T ss_pred             HHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHH
Confidence             11111111            1       112245788899999999999874

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.97  E-value=7.9e-31  Score=219.79  Aligned_cols=232  Identities=18%  Similarity=0.202  Sum_probs=164.2

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC--CC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--CT   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d   84 (249)
                      ||||||||||||++|+++|+++|++|+++++-..   ....+....+...    .+++++.+|+++.+++.+++++  +|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~---~~~~~~~~~~~~~----~~~~~i~~Di~~~~~l~~~~~~~~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSR---KGATDNLHWLSSL----GNFEFVHGDIRNKNDVTRLITKYMPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS---TTHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCc---ccchhHHHHhhcc----CCcEEEEcccCCHHHHHHHHHhcCCc
Confidence            7999999999999999999999999999875330   0011122223222    4689999999999999999975  69


Q ss_pred             EEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCC------CCchh
Q 025660           85 GVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF------WSDVD  156 (249)
Q Consensus        85 ~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~------~~~~~  156 (249)
                      +|||+|+....  ...++. ...++|+.||.+|++++.+.+ ++++++.||..+++...........+.      .....
T Consensus        75 ~Vih~aa~~~~~~~~~~~~-~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (338)
T d1orra_          75 SCFHLAGQVAMTTSIDNPC-MDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGY  152 (338)
T ss_dssp             EEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCB
T ss_pred             eEEeecccccccccccChH-HHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCc
Confidence            99999998655  223444 788999999999999999998 677777776665555433211111110      00001


Q ss_pred             HhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCC-CccHHHH----HHHHcC-CCcc-ccccc
Q 025660          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVRSS----LALILG-NVKL-KICCV  229 (249)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~-~~~~~~~----~~~~~~-~~~~-~~~~~  229 (249)
                      .......|.+.|+.+|...|.++..+...++.....+|+..+|++...... ......+    .+...+ ++.+ .++++
T Consensus       153 ~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  232 (338)
T d1orra_         153 DESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG  232 (338)
T ss_dssp             CTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS
T ss_pred             ccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCC
Confidence            111223467899999999999999998888999999999999988765442 2222222    222222 3334 45788


Q ss_pred             ccccccchhhHHHhhhhc
Q 025660          230 MNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       230 ~~~~~~i~v~d~a~a~~~  247 (249)
                      .+.++|+|++|++.++.+
T Consensus       233 ~~~r~~~~v~D~~~~~~~  250 (338)
T d1orra_         233 KQVRDVLHAEDMISLYFT  250 (338)
T ss_dssp             CCEEECEEHHHHHHHHHH
T ss_pred             ceeEeeecccchhhHHHH
Confidence            999999999999998753

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4e-28  Score=190.25  Aligned_cols=185  Identities=16%  Similarity=0.144  Sum_probs=142.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .||||+||||||+||++++++|+++||+|++++|++        ++.+...     ..+++++.+|++|.+++.++++++
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~--------~~~~~~~-----~~~~~~~~gD~~d~~~l~~al~~~   68 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS--------SRLPSEG-----PRPAHVVVGDVLQAADVDKTVAGQ   68 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG--------GGSCSSS-----CCCSEEEESCTTSHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcCh--------hhccccc-----ccccccccccccchhhHHHHhcCC
Confidence            467899999999999999999999999999999987        3332221     236899999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      |+|||++|....  .    ....++..+++++++++++.+ +++||++||..+++.....        +          .
T Consensus        69 d~vi~~~g~~~~--~----~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~--------~----------~  123 (205)
T d1hdoa_          69 DAVIVLLGTRND--L----SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKV--------P----------P  123 (205)
T ss_dssp             SEEEECCCCTTC--C----SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCS--------C----------G
T ss_pred             CEEEEEeccCCc--h----hhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCccc--------c----------c
Confidence            999999987433  1    223566889999999999999 9999999998754332111        0          1


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHh
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAF  243 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~  243 (249)
                      ....|...|..+|++++.    .+++++++||+.+++.....                ....+..+.....+|+.+|+|+
T Consensus       124 ~~~~~~~~~~~~e~~l~~----~~~~~tiirp~~~~~~~~~~----------------~~~~~~~~~~~~~~i~~~DvA~  183 (205)
T d1hdoa_         124 RLQAVTDDHIRMHKVLRE----SGLKYVAVMPPHIGDQPLTG----------------AYTVTLDGRGPSRVISKHDLGH  183 (205)
T ss_dssp             GGHHHHHHHHHHHHHHHH----TCSEEEEECCSEEECCCCCS----------------CCEEESSSCSSCSEEEHHHHHH
T ss_pred             cccccchHHHHHHHHHHh----cCCceEEEecceecCCCCcc----------------cEEEeeCCCCCCCcCCHHHHHH
Confidence            123588888888877654    69999999999998743221                1222345666778999999999


Q ss_pred             hhh
Q 025660          244 AFA  246 (249)
Q Consensus       244 a~~  246 (249)
                      +++
T Consensus       184 ~~~  186 (205)
T d1hdoa_         184 FML  186 (205)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.2e-29  Score=199.05  Aligned_cols=192  Identities=17%  Similarity=0.102  Sum_probs=144.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++++|||||||||||++|+++|+++|  ++|++++|++.        ....     .....+....+|+.+.+++.+.++
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~--------~~~~-----~~~~~i~~~~~D~~~~~~~~~~~~   79 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL--------TFDE-----EAYKNVNQEVVDFEKLDDYASAFQ   79 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC--------CCCS-----GGGGGCEEEECCGGGGGGGGGGGS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChh--------hhcc-----cccceeeeeeeccccccccccccc
Confidence            45789999999999999999999999  48999999862        1110     111356788899999999999999


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      ++|+|+|++|....  ......+..+|+.++.+++++|.+.+ +++|||+||..++..                      
T Consensus        80 ~~d~vi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~----------------------  134 (232)
T d2bkaa1          80 GHDVGFCCLGTTRG--KAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS----------------------  134 (232)
T ss_dssp             SCSEEEECCCCCHH--HHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------------
T ss_pred             cccccccccccccc--ccchhhhhhhcccccceeeecccccC-ccccccCCccccccC----------------------
Confidence            99999999986533  12224778999999999999999999 999999999875311                      


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCC-cEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGL-DLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                        +.+.|+.+|..+|..+..    .++ +++++||+.+||++....   ....+........    .........|+++|
T Consensus       135 --~~~~Y~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~I~~~d  201 (232)
T d2bkaa1         135 --SNFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSL----PDSWASGHSVPVVT  201 (232)
T ss_dssp             --CSSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSC----CTTGGGGTEEEHHH
T ss_pred             --ccchhHHHHHHhhhcccc----ccccceEEecCceeecCCCcCc---HHHHHHHHHhhcc----CCcccCCCeEEHHH
Confidence              246799999999988765    455 489999999999976532   2223333332221    12223335699999


Q ss_pred             HHhhhh
Q 025660          241 IAFAFA  246 (249)
Q Consensus       241 ~a~a~~  246 (249)
                      +|++++
T Consensus       202 vA~a~i  207 (232)
T d2bkaa1         202 VVRAML  207 (232)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.94  E-value=2.8e-26  Score=187.28  Aligned_cols=190  Identities=12%  Similarity=0.043  Sum_probs=146.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+|||||||||||++|+++|.++||+|++++|+.                            +|++|.+++.++++  ++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------------~D~~d~~~~~~~l~~~~~   53 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------LDITNVLAVNKFFNEKKP   53 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------CCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------------ccCCCHHHHHHHHHHcCC
Confidence            5799999999999999999999999999998875                            48999999999987  57


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|+|+|+....  ....+ +.....|+..+..+++.+....  ..++++||..+++..  ...+.+|.++.        
T Consensus        54 d~vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~--~~~~~~e~~~~--------  120 (281)
T d1vl0a_          54 NVVINCAAHTAVDKCEEQY-DLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGE--AKEPITEFDEV--------  120 (281)
T ss_dssp             SEEEECCCCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSC--CSSCBCTTSCC--------
T ss_pred             CEEEeeccccccccccccc-hhhccccccccccccccccccc--ccccccccceeeecc--ccccccccccc--------
Confidence            999999997654  12223 3677888999999999988876  678888887765432  34456777653        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                       .|.+.|+.+|...|..++.    .+.+.+++||+++|||+.+     +...+......+....+ .+++.++|+|++|+
T Consensus       121 -~~~~~~~~~k~~~e~~~~~----~~~~~~i~R~~~vyG~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~  189 (281)
T d1vl0a_         121 -NPQSAYGKTKLEGENFVKA----LNPKYYIVRTAWLYGDGNN-----FVKTMINLGKTHDELKV-VHDQVGTPTSTVDL  189 (281)
T ss_dssp             -CCCSHHHHHHHHHHHHHHH----HCSSEEEEEECSEESSSSC-----HHHHHHHHHHHCSEEEE-ESSCEECCEEHHHH
T ss_pred             -cchhhhhhhhhHHHHHHHH----hCCCccccceeEEeCCCcc-----cccchhhhhccCCceee-cCCceeccchhhhh
Confidence             3577899999999988765    4789999999999999743     23334444433333322 24688999999999


Q ss_pred             Hhhhhc
Q 025660          242 AFAFAF  247 (249)
Q Consensus       242 a~a~~~  247 (249)
                      +.++.+
T Consensus       190 ~~~~~~  195 (281)
T d1vl0a_         190 ARVVLK  195 (281)
T ss_dssp             HHHHHH
T ss_pred             hhhhhh
Confidence            999754

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.4e-26  Score=190.93  Aligned_cols=211  Identities=18%  Similarity=0.174  Sum_probs=141.5

Q ss_pred             EEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh-HHHHH-----
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-FDAAI-----   80 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-~~~~~-----   80 (249)
                      |||||||||||++|+++|+++|+ +|+++++-..     . .+...+.+.         ...|..+.+. .....     
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~-----~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~   66 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-----G-TKFVNLVDL---------NIADYMDKEDFLIQIMAGEEF   66 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS-----G-GGGHHHHTS---------CCSEEEEHHHHHHHHHTTCCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCC-----c-chhhccccc---------chhhhccchHHHHHHhhhhcc
Confidence            89999999999999999999995 8999875330     1 112222211         1223333332 22222     


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhh
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (249)
                      ..+++|+|+|+.......+.. .+...|+.++.+++++++..+ + ++++.||..+++....  ...+++.+        
T Consensus        67 ~~~~~i~~~aa~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~--~~~~~~~~--------  133 (307)
T d1eq2a_          67 GDVEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTS--DFIESREY--------  133 (307)
T ss_dssp             SSCCEEEECCSCCCTTCCCHH-HHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCS--CBCSSGGG--------
T ss_pred             cchhhhhhhcccccccccccc-ccccccccccccccccccccc-c-cccccccccccccccc--cccccccc--------
Confidence            247899999987665444444 788899999999999999988 5 5667777665544322  22333322        


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCC--CCccHHHHHHHHcCCCc--ccccccccccccc
Q 025660          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGNVK--LKICCVMNRSHTL  236 (249)
Q Consensus       161 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i  236 (249)
                       ..|.+.|+.+|..+|.++..+..+++++++++||+++|||.....  .......+.+.+..++.  +..+.+...++|+
T Consensus       134 -~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~  212 (307)
T d1eq2a_         134 -EKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV  212 (307)
T ss_dssp             -CCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEE
T ss_pred             -cccccccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeee
Confidence             346789999999999999999988899999999999999986533  23344455555555543  2347788889999


Q ss_pred             hhhHHHhhhhc
Q 025660          237 FVYAIAFAFAF  247 (249)
Q Consensus       237 ~v~d~a~a~~~  247 (249)
                      |++|++.++.+
T Consensus       213 ~v~d~~~~~~~  223 (307)
T d1eq2a_         213 YVGDVADVNLW  223 (307)
T ss_dssp             EHHHHHHHHHH
T ss_pred             ecccHHHHHHH
Confidence            99999999753

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=3.7e-25  Score=177.35  Aligned_cols=194  Identities=13%  Similarity=0.120  Sum_probs=145.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|++        ++.+.+.+..  ..+..++.+|++|+++++++++  
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   74 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD--------EEGKAMAAEL--ADAARYVHLDVTQPAQWKAAVDTA   74 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHT--GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh--hCcceEEEeecCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999987        5555543221  2367889999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           .+|++|||||....     ...+.++..+++|+.++..+.+.+    ++.+ .++||++||..+..+.+.     
T Consensus        75 ~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~-----  148 (244)
T d1nffa_          75 VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVA-----  148 (244)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-----
T ss_pred             HHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEecccccccccccc-----
Confidence                 58999999997654     122334589999999988877755    3444 579999999876433322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcc
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKL  224 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (249)
                                       ...|+.||...+.+.+.++.+   +|++++.|.||.+.+|........               
T Consensus       149 -----------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---------------  196 (244)
T d1nffa_         149 -----------------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED---------------  196 (244)
T ss_dssp             -----------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT---------------
T ss_pred             -----------------ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH---------------
Confidence                             357999999988888887766   489999999999998865322110               


Q ss_pred             cccccccccccchhhHHHhhhhc
Q 025660          225 KICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       225 ~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                        .....+..+...+|+|.+++|
T Consensus       197 --~~~~pl~R~~~p~diA~~v~f  217 (244)
T d1nffa_         197 --IFQTALGRAAEPVEVSNLVVY  217 (244)
T ss_dssp             --CSCCSSSSCBCHHHHHHHHHH
T ss_pred             --HHhccccCCCCHHHHHHHHHH
Confidence              001223346677888887765

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.93  E-value=2.5e-25  Score=180.37  Aligned_cols=172  Identities=16%  Similarity=0.128  Sum_probs=130.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCC-CCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLP-GASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~-~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|++.       +..+.+. ++. ..+.++.++.+|++|+++++++++
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~-------~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   75 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-------AEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVD   75 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCH-------HHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcH-------HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            6789999999999999999999999999999999751       2333221 111 123478899999999999988876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|++|||||....     ...+.++..+++|+.++.++.+.+    ++.+ .++||++||..+..+.+.   
T Consensus        76 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~---  151 (260)
T d1x1ta1          76 NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASAN---  151 (260)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccCC---
Confidence                   58999999997654     223344589999999887766655    4455 579999999876543322   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                         ...|+.||...+.+.+.++.+   +|++++.|.||.|.+|....
T Consensus       152 -------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~  195 (260)
T d1x1ta1         152 -------------------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK  195 (260)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----
T ss_pred             -------------------cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhh
Confidence                               357999999999888888776   48999999999999887543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=7.3e-26  Score=178.01  Aligned_cols=183  Identities=20%  Similarity=0.177  Sum_probs=127.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH-c
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI-A   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~   81 (249)
                      .|+|||||||||||++|+++|+++|+  +|+++.|++.                 ....++   ..+..|..++.+.+ .
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~-----------------~~~~~~---~~~~~d~~~~~~~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL-----------------AEHPRL---DNPVGPLAELLPQLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC-----------------CCCTTE---ECCBSCHHHHGGGCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCch-----------------hhcccc---cccccchhhhhhcccc
Confidence            47999999999999999999999997  6777777651                 111122   33444444333333 3


Q ss_pred             CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      .+|.|||++|.......+. +.+...|+.++.+++++|++.+ +++|+++||..++..                      
T Consensus        62 ~~d~vi~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~----------------------  117 (212)
T d2a35a1          62 SIDTAFCCLGTTIKEAGSE-EAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK----------------------  117 (212)
T ss_dssp             CCSEEEECCCCCHHHHSSH-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------------
T ss_pred             chheeeeeeeeeccccccc-cccccchhhhhhhccccccccc-ccccccccccccccc----------------------
Confidence            5899999998754322333 3788999999999999999988 999999999775321                      


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCC-cEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGL-DLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYA  240 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  240 (249)
                        +.+.|+.+|..+|+.++.    .++ +++++||+.||||........   .+     ......+.  ...+..||++|
T Consensus       118 --~~~~y~~~K~~~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~~~~~---~~-----~~~~~~~~--~~~~~~i~v~D  181 (212)
T d2a35a1         118 --SSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRLAE---IL-----AAPIARIL--PGKYHGIEACD  181 (212)
T ss_dssp             --CSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEGGG---GT-----TCCCC------CHHHHHHHHH
T ss_pred             --cccchhHHHHHHhhhccc----cccccceeeCCcceeCCcccccHHH---HH-----HHHHhhcc--CCCCcEEEHHH
Confidence              246799999999988765    355 599999999999976532111   11     11111111  12245699999


Q ss_pred             HHhhhhc
Q 025660          241 IAFAFAF  247 (249)
Q Consensus       241 ~a~a~~~  247 (249)
                      +|.++.+
T Consensus       182 vA~ai~~  188 (212)
T d2a35a1         182 LARALWR  188 (212)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=3e-25  Score=178.87  Aligned_cols=171  Identities=15%  Similarity=0.109  Sum_probs=132.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      +.|++|||||+++||++++++|+++|++|++++|+.        +..+.+ +++...+.++..+.+|++|++++.++++ 
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~--------~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~   80 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ--------KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK   80 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH--------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999987        444433 3333445578999999999999888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|++|||||....     ...+.++..+++|+.++..+.+++    ++.+ .++||++||..+..+.+.    
T Consensus        81 ~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~----  155 (251)
T d2c07a1          81 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVG----  155 (251)
T ss_dssp             HHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTT----
T ss_pred             HHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCC----
Confidence                  58999999997654     122344589999999988777755    4445 589999999887544322    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                        ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.++....
T Consensus       156 ------------------~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~  199 (251)
T d2c07a1         156 ------------------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK  199 (251)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred             ------------------CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc
Confidence                              357999999999888888766   48999999999999987544

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=2.2e-24  Score=172.73  Aligned_cols=169  Identities=19%  Similarity=0.151  Sum_probs=132.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+.++|++|||||+++||++++++|+++|++|++++|+.        ++.+.+.+..    +.+.+.+|++|++++++++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~l~~~~~~~----~~~~~~~Dv~~~~~v~~~~   68 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE--------GPLREAAEAV----GAHPVVMDVADPASVERGF   68 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTT----TCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHc----CCeEEEEecCCHHHHHHHH
Confidence            777889999999999999999999999999999999987        5555543321    4678999999999988887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|++|||||....     ...+.++..+++|+.++.++.+++.+    .+ ...++++||.. ..+.+   
T Consensus        69 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~~-~~~~~---  143 (242)
T d1ulsa_          69 AEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGNL---  143 (242)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCCT---
T ss_pred             HHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeecccc-ccCCC---
Confidence            5       58999999997654     12233458999999998888877654    33 45677777743 22211   


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~  205 (249)
                                         ....|+.||.+.+.+.+.++.+.   |++++.|.||.+.++....
T Consensus       144 -------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~  188 (242)
T d1ulsa_         144 -------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK  188 (242)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc
Confidence                               14579999999888888877663   8999999999999987654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.6e-25  Score=180.81  Aligned_cols=173  Identities=13%  Similarity=0.067  Sum_probs=134.4

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |+-++|++|||||+++||++++++|+++|++|++.+|+.        ++.+.+ +++...+.++..+++|++++++++++
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~   78 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA--------DAANHVVDEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Confidence            344679999999999999999999999999999999987        444433 23333345788999999999988887


Q ss_pred             Hc-------CCCEEEEccccCCCC----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           80 IA-------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      ++       ++|++|||||.....    ..+.++..+++|+.++.++.+.+.    +.+ .+++|++||..+..+.+.  
T Consensus        79 ~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~~--  155 (255)
T d1fmca_          79 ADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNIN--  155 (255)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTT--
T ss_pred             HHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccccc--
Confidence            65       589999999976541    223345899999999888777654    344 568999999876443322  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                          ...|+.||.+.+.+.+.++.+   +|+++++|.||.|.++...
T Consensus       156 --------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~  198 (255)
T d1fmca_         156 --------------------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK  198 (255)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH
T ss_pred             --------------------cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhh
Confidence                                457999999888888877766   4899999999999887643

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=7e-25  Score=175.72  Aligned_cols=169  Identities=19%  Similarity=0.145  Sum_probs=134.7

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |.-++|++|||||+++||++++++|+++|++|++++|+.        ++.+.+.+..   .++..+.+|++|++++++++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~~---~~~~~~~~Dv~~~~~v~~~~   69 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN--------SDLVSLAKEC---PGIEPVCVDLGDWDATEKAL   69 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS---TTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHhc---CCCeEEEEeCCCHHHHHHHH
Confidence            667889999999999999999999999999999999987        5555543222   25788999999999999999


Q ss_pred             c---CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccccC
Q 025660           81 A---GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        81 ~---~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                      +   ++|++|||||....     ...+.++..+++|+.++.++.+.+.+    .+..+++|++||.....+.+.      
T Consensus        70 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------  143 (242)
T d1cyda_          70 GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN------  143 (242)
T ss_dssp             TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT------
T ss_pred             HHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc------
Confidence            8   47999999997654     12333458899999999888876543    232579999999875433221      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                      ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+.+|.
T Consensus       144 ----------------~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~  184 (242)
T d1cyda_         144 ----------------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM  184 (242)
T ss_dssp             ----------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred             ----------------cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHH
Confidence                            357999999999888888776   48999999999998875

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.93  E-value=6.7e-25  Score=177.33  Aligned_cols=171  Identities=15%  Similarity=0.140  Sum_probs=135.9

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+-++|++|||||+++||++++++|+++|++|++.+|+.        ++.+.+.+..  +.++..+.+|+++++++++++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~~--~~~~~~~~~Dvt~~~~v~~~~   70 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINL--------EAARATAAEI--GPAACAIALDVTDQASIDRCV   70 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCH--------HHHHHHHHHH--CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh--CCceEEEEeeCCCHHHHHHHH
Confidence            777889999999999999999999999999999999987        5555443221  346889999999999988887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       .+|++|||||....     ...+.++..+++|+.++..+.+.+.    +.+..++||++||..+..+.+.  
T Consensus        71 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--  148 (256)
T d1k2wa_          71 AELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL--  148 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc--
Confidence            6       58999999997654     1223345899999999888887543    2332579999999876433322  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                          ...|+.||.+.+.+.+.++.+   +|++++.|.||.+-+|..
T Consensus       149 --------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~  190 (256)
T d1k2wa_         149 --------------------VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW  190 (256)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH
T ss_pred             --------------------ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh
Confidence                                357999999988888887766   489999999999998864

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.92  E-value=5.6e-26  Score=187.66  Aligned_cols=204  Identities=15%  Similarity=0.056  Sum_probs=142.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +++||||||||||||++|+++|+++||+|++++|+...   ....+...+....  ..+++++.+|++|.+.+.+.++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~---~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~~~   76 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVV---SNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQV   76 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCS---SCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcc---cchhHHHHHhhhc--cCCcEEEEeecccchhhhhhccCc
Confidence            46789999999999999999999999999999997621   1111222222221  136889999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      +.++|+++...          ...|..++.++++++.+.. ..++++.||.......        +..+         ..
T Consensus        77 ~~~~~~~~~~~----------~~~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~--------~~~~---------~~  128 (312)
T d1qyda_          77 DVVISALAGGV----------LSHHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDI--------MEHA---------LQ  128 (312)
T ss_dssp             SEEEECCCCSS----------SSTTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTS--------CCCC---------CS
T ss_pred             chhhhhhhhcc----------cccchhhhhHHHHHHHHhc-CCcEEEEeeccccCCC--------cccc---------cc
Confidence            99999998632          2345667788899998887 6788888885432111        1111         11


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHh
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAF  243 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~  243 (249)
                      |...|..+|..++.    +....+++++++||+.+||+.........   ......++....++.+++.++|+|++|+|+
T Consensus       129 ~~~~~~~~~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  201 (312)
T d1qyda_         129 PGSITFIDKRKVRR----AIEAASIPYTYVSSNMFAGYFAGSLAQLD---GHMMPPRDKVLIYGDGNVKGIWVDEDDVGT  201 (312)
T ss_dssp             STTHHHHHHHHHHH----HHHHTTCCBCEEECCEEHHHHTTTSSCTT---CCSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred             hhhhhhHHHHHHHH----hhcccccceEEeccceeecCCccchhhHH---HHhhhcccccccccccccccceeeHHHHHH
Confidence            33456655555554    44457999999999999998654321111   011113344556788899999999999999


Q ss_pred             hhhc
Q 025660          244 AFAF  247 (249)
Q Consensus       244 a~~~  247 (249)
                      +++.
T Consensus       202 a~~~  205 (312)
T d1qyda_         202 YTIK  205 (312)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8753

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=3.6e-25  Score=177.99  Aligned_cols=163  Identities=13%  Similarity=0.088  Sum_probs=129.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|++        +..+..++.     +...+++|++|+++++++++  
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~--------~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~   70 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP--------EGKEVAEAI-----GGAFFQVDLEDERERVRFVEEA   70 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--------THHHHHHHH-----TCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHH
Confidence            678999999999999999999999999999999987        443333333     34678999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++|||||....     ...+.++..+++|+.++.++.+++.    +.+ .++||++||..+..+.+.     
T Consensus        71 ~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~~~-----  144 (248)
T d2d1ya1          71 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQE-----  144 (248)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTT-----
T ss_pred             HHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccccc-----
Confidence                 58999999997654     1223345899999999888777664    344 579999999886544322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                       ...|+.||...+.+.+.++.+   +|+++++|.||.+.+|+
T Consensus       145 -----------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~  185 (248)
T d2d1ya1         145 -----------------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA  185 (248)
T ss_dssp             -----------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             -----------------cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCch
Confidence                             457999999988888887776   48999999999998764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.92  E-value=3.4e-24  Score=174.38  Aligned_cols=173  Identities=14%  Similarity=0.173  Sum_probs=134.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++++|+.        ++.+.+.+.......+.++.+|++|+++++++++  
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD--------DHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT   76 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999987        5555443222233467889999999999888876  


Q ss_pred             -----CCCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -----GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                           .+|++|||||....       ...+.++..+++|+.++..+.+.+.    +.+ .+++|++||...+.....   
T Consensus        77 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~---  152 (268)
T d2bgka1          77 IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEG---  152 (268)
T ss_dssp             HHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTT---
T ss_pred             HHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccccc---
Confidence                 58999999996532       1123345889999999888777654    444 579999999876433211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPK  206 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~  206 (249)
                                        ....|+.||.+.+.+.+.++.+   +|++++.|.||.+.+|.....
T Consensus       153 ------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~  198 (268)
T d2bgka1         153 ------------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV  198 (268)
T ss_dssp             ------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS
T ss_pred             ------------------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhh
Confidence                              1246999999988888887766   489999999999999976543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.92  E-value=1.5e-24  Score=174.29  Aligned_cols=169  Identities=15%  Similarity=0.167  Sum_probs=127.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+++||+++++.|+++|++|++.+|++.       +..+ .+++   .+.++..+.+|++|+++++++++ 
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~-------~~~~~~~~~---~g~~~~~~~~Dvs~~~~v~~~~~~   73 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-------PEAEAAIRN---LGRRVLTVKCDVSQPGDVEAFGKQ   73 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-------HHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch-------HHHHHHHHH---cCCcEEEEEeeCCCHHHHHHHHHH
Confidence            5789999999999999999999999999999999862       2222 2222   23578899999999998888875 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                            ++|++|||||....     ...+.++..+++|+.++.++.+++    ++.+ .++||++||..+..+.+.    
T Consensus        74 ~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~----  148 (247)
T d2ew8a1          74 VISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEA----  148 (247)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSS----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCcc----
Confidence                  58999999998654     122344599999999988877765    4445 579999999876433221    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                        ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.+|....
T Consensus       149 ------------------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~  192 (247)
T d2ew8a1         149 ------------------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA  192 (247)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------
T ss_pred             ------------------cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccc
Confidence                              357999999888888877765   48999999999999887543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.6e-24  Score=173.81  Aligned_cols=169  Identities=18%  Similarity=0.138  Sum_probs=133.6

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .++|++|||||+++||++++++|+++|++|++++|+.        ++.+.+.+..   .++..+.+|++|+++++++++ 
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~--------~~l~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~   73 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ--------ADLDSLVREC---PGIEPVCVDLGDWEATERALGS   73 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHhc---CCCeEEEEeCCCHHHHHHHHHH
Confidence            3679999999999999999999999999999999987        5555543222   257889999999999999987 


Q ss_pred             --CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCccccCCC
Q 025660           82 --GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 --~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                        ++|++|||||....     ...+.++..+++|+.++.++.+.+.+    .+..+++|++||..+..+.+.        
T Consensus        74 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~--------  145 (244)
T d1pr9a_          74 VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN--------  145 (244)
T ss_dssp             CCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT--------
T ss_pred             hCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc--------
Confidence              47999999997654     12233458999999988887776543    232579999999876433221        


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                    ...|+.||.+.+.+.+.++.+   +|++++.|.||.|.+|...
T Consensus       146 --------------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~  188 (244)
T d1pr9a_         146 --------------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ  188 (244)
T ss_dssp             --------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHH
T ss_pred             --------------hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHh
Confidence                          357999999999888888766   4899999999999988643

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.92  E-value=4.3e-25  Score=177.95  Aligned_cols=171  Identities=16%  Similarity=0.146  Sum_probs=132.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        ++.+.+.+......++.++.+|++|+++++++++  
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS--------DVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT   76 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999987        5555443222334578999999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++|||||....     ...+.++..+++|+.++.++.+.+.    +.+...+||++||..+..+.+.     
T Consensus        77 ~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~-----  151 (251)
T d1zk4a1          77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS-----  151 (251)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT-----
T ss_pred             HHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC-----
Confidence                 58999999998654     1223345899999999888877764    3342248999999876433211     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~~~  204 (249)
                                       ...|+.||...+.+.+.++.+     +|++++.|.||.+.+|...
T Consensus       152 -----------------~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~  196 (251)
T d1zk4a1         152 -----------------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD  196 (251)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHH
T ss_pred             -----------------chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHH
Confidence                             357999999988888876543     4899999999999887643

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.92  E-value=2.7e-24  Score=173.32  Aligned_cols=166  Identities=18%  Similarity=0.165  Sum_probs=132.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||++.||++++++|+++|++|++.+|+.        ++.+.+.+..  +.++.++.+|++++++++++++  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   73 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD--------EEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh--CCceEEEEcccCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999987        5555443222  3468899999999999888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           .+|++|||||....     ...+.++..+++|+.++.++.+.+.    +.+ .++||++||..+..+.+.     
T Consensus        74 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~~-----  147 (254)
T d1hdca_          74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLAL-----  147 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-----
T ss_pred             HHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccccc-----
Confidence                 58999999998654     2223345899999999888777664    445 589999999876543322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                       ...|+.||.+.+.+.+.++.+   +|+++++|.||.+.+|.
T Consensus       148 -----------------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~  188 (254)
T d1hdca_         148 -----------------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM  188 (254)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             -----------------hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc
Confidence                             457999999998888888776   47999999999998764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.92  E-value=1e-24  Score=174.11  Aligned_cols=159  Identities=19%  Similarity=0.191  Sum_probs=125.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++++|+..        .          ..++..+++|++|+++++++++  
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~--------~----------~~~~~~~~~Dv~~~~~v~~~~~~~   67 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG--------A----------PKGLFGVEVDVTDSDAVDRAFTAV   67 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC--------C----------CTTSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------h----------hcCceEEEEecCCHHHHHHHHHHH
Confidence            5789999999999999999999999999999999871        1          1245779999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++|||||....     ...+.++..+++|+.++..+.+.+    ++.+ .++||++||..+..+.+.     
T Consensus        68 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~-----  141 (237)
T d1uzma1          68 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGN-----  141 (237)
T ss_dssp             HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----C-----
T ss_pred             HHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcc-----
Confidence                 58999999997544     122344589999999987776654    4455 579999999876544322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                       ...|+.||.+.+.+.+.++.+   +|+++++|.||.+.++..
T Consensus       142 -----------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~  183 (237)
T d1uzma1         142 -----------------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT  183 (237)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             -----------------cHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhh
Confidence                             357999999999888887776   489999999999988754

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.92  E-value=3.5e-25  Score=179.25  Aligned_cols=170  Identities=18%  Similarity=0.129  Sum_probs=133.6

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++|++|||||+++||++++++|+++|++|++.+|+.        ++.+.+ +++...+.+...+.+|++|+++++++++
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   77 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ--------KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMN   77 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999987        444433 3333345578889999999998887764


Q ss_pred             --------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           82 --------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 --------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                              .+|++|||||....     ...+.++..+++|+.++.++.+.+.    +.+ .++||++||..+..+.+.  
T Consensus        78 ~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~--  154 (259)
T d2ae2a_          78 TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPY--  154 (259)
T ss_dssp             HHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-cccccccccccccccccc--
Confidence                    37999999997654     1223345899999999888777654    344 579999999876433221  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                          ...|+.||...+.+.+.++.+   +|++++.|.||.|.+|..
T Consensus       155 --------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~  196 (259)
T d2ae2a_         155 --------------------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLV  196 (259)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHH
T ss_pred             --------------------ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHH
Confidence                                457999999999998888776   389999999999988753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.9e-25  Score=179.14  Aligned_cols=168  Identities=15%  Similarity=0.154  Sum_probs=133.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|+++||||+++||++++++|+++|++|++.+|++        +..+.+.+..  +.+...+.+|++++++++++++  
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~--------~~l~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   72 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE--------NGAQAISDYL--GANGKGLMLNVTDPASIESVLEKI   72 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHh--CCCCcEEEEEecCHHHhhhhhhhh
Confidence            578999999999999999999999999999999987        5555543221  2357889999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++||+||....     ...+.++..+++|+.++..+.+.+.    +.+ .++||++||..+..+.+.     
T Consensus        73 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~-----  146 (243)
T d1q7ba_          73 RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGG-----  146 (243)
T ss_dssp             HHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT-----
T ss_pred             hcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCCC-----
Confidence                 58999999997654     1223445889999999888777664    444 579999999876544322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                       ...|+.||.+.+.+.+.++.+   +|++++.|.||.+-++...
T Consensus       147 -----------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~  189 (243)
T d1q7ba_         147 -----------------QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR  189 (243)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             -----------------CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh
Confidence                             357999999988888887766   4899999999999887543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.8e-24  Score=173.94  Aligned_cols=165  Identities=16%  Similarity=0.157  Sum_probs=131.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++++|++        +..+.+.+..   .+...+.+|++|+++++++++  
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~~~~~~~~~---~~~~~~~~Dvs~~~~v~~~~~~~   73 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE--------SGGRALEQEL---PGAVFILCDVTQEDDVKTLVSET   73 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHC---TTEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHhc---CCCeEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999987        6666554332   357889999999999888876  


Q ss_pred             -----CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                           ++|++|||||....      ...+.++..+++|+.++.++.+++.+.   + .+++|++||..+..+.+.     
T Consensus        74 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~-----  147 (250)
T d1ydea1          74 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQ-----  147 (250)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTT-----
T ss_pred             HHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccC-----
Confidence                 58999999996532      122334588999999988877766532   2 379999999876543322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                       ...|+.+|...+.+.+.++.+   +|++++.|.||.|.+|.
T Consensus       148 -----------------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~  188 (250)
T d1ydea1         148 -----------------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL  188 (250)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             -----------------cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence                             457999999888888887776   48999999999998875

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.92  E-value=1.9e-24  Score=174.77  Aligned_cols=168  Identities=19%  Similarity=0.169  Sum_probs=131.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cC--CCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NL--PGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~--~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        ++.+.+. ++  ...+.++..+.+|++|++++++++
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~   74 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSS--------EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV   74 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHH
Confidence            578999999999999999999999999999999987        4444331 11  123457889999999999988887


Q ss_pred             c-------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCC
Q 025660           81 A-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (249)
                      +       ++|++|||||....      ...+.++..+++|+.++.++.+++.    +.+ .++||++||..+..+.+. 
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~-  152 (258)
T d1iy8a_          75 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGN-  152 (258)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSS-
T ss_pred             HHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCCCC-
Confidence            6       58999999996532      1223445899999999888887663    344 579999999876443322 


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                           ...|+.||...+.+.+.++.+   +|++++.|.||.+.+|.
T Consensus       153 ---------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~  193 (258)
T d1iy8a_         153 ---------------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  193 (258)
T ss_dssp             ---------------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             ---------------------chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHH
Confidence                                 357999999888888877665   48999999999998875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.92  E-value=2e-24  Score=174.49  Aligned_cols=167  Identities=19%  Similarity=0.214  Sum_probs=130.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      |.+|||||+++||++++++|+++|++|++.+|++        ++.+.+ +++...+.++..+.+|++|+++++++++   
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   73 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYND--------ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQAR   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            5579999999999999999999999999999987        554443 2333344578899999999998888876   


Q ss_pred             ----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          ++|++|||||....     ...+.++..+++|+.++.++.+++.    +.+..+++|++||..+..+.+.      
T Consensus        74 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~------  147 (255)
T d1gega_          74 KTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE------  147 (255)
T ss_dssp             HHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------
T ss_pred             HHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc------
Confidence                58999999997654     1223345899999999988877653    3343568999999876433322      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                      ...|+.||...+.+.+.++.+   +|++++.|.||.+.+|.
T Consensus       148 ----------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  188 (255)
T d1gega_         148 ----------------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM  188 (255)
T ss_dssp             ----------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             ----------------cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH
Confidence                            357999999988888887766   48999999999998765

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=3e-24  Score=173.66  Aligned_cols=171  Identities=18%  Similarity=0.175  Sum_probs=123.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+++||++++++|+++|++|++++|+.        ++.+.+ +++.....++..+.+|++++++++++++ 
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~--------~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   78 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE--------YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT   78 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999987        444433 3333334578999999999988777664 


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             .+|++|||||....     ...+.++..+++|+.++..+.+.+.    +.+ .++||++||..+..+.+.   
T Consensus        79 ~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~---  154 (259)
T d1xq1a_          79 VSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASV---  154 (259)
T ss_dssp             HHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-------------
T ss_pred             HHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccccccc---
Confidence                   38999999997654     1223345899999999888777654    445 579999999876543321   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                         ...|+.||.+.+.+.+.++.+   +|+++++|.||.|.+|....
T Consensus       155 -------------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~  198 (259)
T d1xq1a_         155 -------------------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA  198 (259)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------
T ss_pred             -------------------cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhh
Confidence                               457999999988888887766   48999999999999887543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.92  E-value=3e-24  Score=173.82  Aligned_cols=172  Identities=13%  Similarity=0.067  Sum_probs=131.7

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++|++|||||+++||++++++|+++|++|++.+|+..       +..+.+ +++...+.++..+.+|++|+++++++++
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~-------~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~   77 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE-------DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcH-------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            36789999999999999999999999999999999861       233322 2333334578899999999999888876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|++|||||....     ...+.++..+++|+.++.++.+.+    .+.+..++||++||.....+.+.   
T Consensus        78 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~---  154 (261)
T d1geea_          78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL---  154 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---
T ss_pred             HHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc---
Confidence                   58999999998654     122334589999999887776655    34442356999999875433211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                         ...|+.||.+.+.+.+.++.+.   |+++++|.||.|.+|..
T Consensus       155 -------------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~  196 (261)
T d1geea_         155 -------------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN  196 (261)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG
T ss_pred             -------------------ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhH
Confidence                               3579999999888888877663   89999999999988754

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.91  E-value=6.6e-24  Score=169.76  Aligned_cols=168  Identities=14%  Similarity=0.117  Sum_probs=131.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCe-------EEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYS-------VTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      +.||||||+++||++++++|+++|++       |++.+|+.        ++.+.+ .++...+.++..+.+|++|+++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~--------~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~   73 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA--------ADLEKISLECRAEGALTDTITADISDMADVR   73 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH--------HHHHHHHHHHHTTTCEEEEEECCTTSHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            35899999999999999999999987       88888887        555443 333344567889999999999888


Q ss_pred             HHHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccC
Q 025660           78 AAIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~  141 (249)
                      ++++       ++|++|||||....     ...+.++..+++|+.++.++.+.+.    +.+ .+++|++||..+..+.+
T Consensus        74 ~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~  152 (240)
T d2bd0a1          74 RLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFR  152 (240)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCC
Confidence            8876       48999999997654     1233445899999999887766554    445 57999999987654332


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      .                      ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.+|...
T Consensus       153 ~----------------------~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~  196 (240)
T d2bd0a1         153 H----------------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG  196 (240)
T ss_dssp             T----------------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC
T ss_pred             C----------------------ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh
Confidence            2                      357999999888888877666   4899999999999998754

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.91  E-value=2.4e-24  Score=174.11  Aligned_cols=170  Identities=18%  Similarity=0.137  Sum_probs=130.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||++.||++++++|+++|++|++++|++        ++.+.+ +++...+....++.+|+++.++++++++ 
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~--------~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~   76 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE--------KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT   76 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHH
Confidence            678999999999999999999999999999999987        444432 3333344578889999999998877764 


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             .+|++||+||....     ...+.++..+++|+.++..+.+++.    +.+ .+++|++||..+..+.+.   
T Consensus        77 ~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~~~---  152 (258)
T d1ae1a_          77 VAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPS---  152 (258)
T ss_dssp             HHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTT---
T ss_pred             HHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-cccccccccccccccccc---
Confidence                   37999999997654     1223345899999999888877664    344 689999999876433221   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                         ...|+.+|...+.+.+.++.+.   |+++++|.||.+.+|+..
T Consensus       153 -------------------~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~  195 (258)
T d1ae1a_         153 -------------------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVE  195 (258)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred             -------------------chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchh
Confidence                               4579999999998888887763   799999999999998754

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=5.9e-24  Score=169.09  Aligned_cols=195  Identities=14%  Similarity=0.118  Sum_probs=135.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCe--EEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS--VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .|++|||||||||||++++++|+++||+  |+.+.|++        ++...+.      .+++++.+|+++.+++.++++
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~--------~~~~~~~------~~~~~~~~d~~~~~~~~~~~~   67 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA--------QGKEKIG------GEADVFIGDITDADSINPAFQ   67 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCH--------HHHHHTT------CCTTEEECCTTSHHHHHHHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCH--------HHHHhcc------CCcEEEEeeeccccccccccc
Confidence            5789999999999999999999999976  55566765        3333222      256899999999999999999


Q ss_pred             CCCEEEEccccCCC---------------CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccc
Q 025660           82 GCTGVLHVATPVDF---------------EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 ~~d~vih~a~~~~~---------------~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      ++|.|||+|+....               ...... ....+|+.++++++..+.... .+++.+.|+...+.....    
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~----  141 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQ-YPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHP----  141 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTC-SHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCG----
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccch-hhhccccccceeecccccccc-ccccccccccccCCCCcc----
Confidence            99999999986432               012222 567889999999999999888 788998888654221100    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccc
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKI  226 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (249)
                      ..             ..+...|...+...+    .+...++++++++||+++|||..... ..+        .+..   .
T Consensus       142 ~~-------------~~~~~~~~~~~~~~~----~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~--------~~~~---~  192 (252)
T d2q46a1         142 LN-------------KLGNGNILVWKRKAE----QYLADSGTPYTIIRAGGLLDKEGGVR-ELL--------VGKD---D  192 (252)
T ss_dssp             GG-------------GGGGCCHHHHHHHHH----HHHHHSSSCEEEEEECEEECSCTTSS-CEE--------EEST---T
T ss_pred             cc-------------cccccchhhhhhhhh----hhhhcccccceeecceEEECCCcchh-hhh--------hccC---c
Confidence            00             001233554444433    44455799999999999999975432 100        1111   1


Q ss_pred             cccccccccchhhHHHhhhhc
Q 025660          227 CCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       227 ~~~~~~~~~i~v~d~a~a~~~  247 (249)
                      ........|||++|+|++++.
T Consensus       193 ~~~~~~~~~i~~~Dva~a~~~  213 (252)
T d2q46a1         193 ELLQTDTKTVPRADVAEVCIQ  213 (252)
T ss_dssp             GGGGSSCCEEEHHHHHHHHHH
T ss_pred             ccccCCCCeEEHHHHHHHHHH
Confidence            123344679999999999753

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.91  E-value=1.9e-24  Score=173.32  Aligned_cols=169  Identities=17%  Similarity=0.157  Sum_probs=130.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      +.||||||+++||++++++|+++|++|++.+++..       +..+.+ +++...+.++..+.+|++|+++++++++   
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   74 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSA-------KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAI   74 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999998766541       333333 2222234578899999999999888876   


Q ss_pred             ----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccC
Q 025660           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                          ++|++|||||....     ...+.++..+++|+.++.++.+.+    ++.+ .++||++||..+..+.+.      
T Consensus        75 ~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~------  147 (244)
T d1edoa_          75 DAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIG------  147 (244)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTT------
T ss_pred             HHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCC------
Confidence                58999999997654     123334589999999988876655    4445 689999999887544322      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                      ...|+.||.+.+.+.+.++.+   +|+++++|.||.+.+|...
T Consensus       148 ----------------~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~  190 (244)
T d1edoa_         148 ----------------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA  190 (244)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH
T ss_pred             ----------------CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH
Confidence                            357999999888888877776   4899999999999887543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.91  E-value=3.4e-24  Score=175.82  Aligned_cols=193  Identities=18%  Similarity=0.067  Sum_probs=141.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--CC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   83 (249)
                      |+|||||||||||++|+++|.++|+.| .++++..                        .+.+|++|.+.++++++  ++
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~------------------------~~~~Dl~~~~~~~~~i~~~~~   55 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSK------------------------EFCGDFSNPKGVAETVRKLRP   55 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCS------------------------SSCCCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCc------------------------cccCcCCCHHHHHHHHHHcCC
Confidence            479999999999999999999888755 4455440                        13589999999999987  46


Q ss_pred             CEEEEccccCCC--CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhc
Q 025660           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (249)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (249)
                      |+|||+||....  ...++. ..+..|+.++.+|++++++.+  .+++++||..+++..  ...+.+|+.+.        
T Consensus        56 D~Vih~Aa~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~~--~~~~~~E~~~~--------  122 (298)
T d1n2sa_          56 DVIVNAAAHTAVDKAESEPE-LAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPGT--GDIPWQETDAT--------  122 (298)
T ss_dssp             SEEEECCCCCCHHHHTTCHH-HHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCCC--TTCCBCTTSCC--------
T ss_pred             CEEEEecccccccccccCcc-ccccccccccccchhhhhccc--cccccccccccccCC--CCCCCcccccc--------
Confidence            999999997654  344554 788999999999999999887  578888888765433  34577888764        


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHH
Q 025660          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAI  241 (249)
Q Consensus       162 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  241 (249)
                       .|.+.|+.+|..+|..+..+    .....++|++..++....    .....+.+.+.....+.. .+...++++|+.|+
T Consensus       123 -~p~~~y~~~k~~~e~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~  192 (298)
T d1n2sa_         123 -SPLNVYGKTKLAGEKALQDN----CPKHLIFRTSWVYAGKGN----NFAKTMLRLAKERQTLSV-INDQYGAPTGAELL  192 (298)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC----CHHHHHHHHHHHCSEEEE-ECSCEECCEEHHHH
T ss_pred             -CCCchHhhhhhhhhhhHHhh----hcccccccccceeeccCC----ccchhhhhhhcccceeec-ccceeecccccchH
Confidence             36789999999999988764    334566666666654322    223344555555554433 34567789999998


Q ss_pred             Hhhhh
Q 025660          242 AFAFA  246 (249)
Q Consensus       242 a~a~~  246 (249)
                      +.++.
T Consensus       193 ~~~~~  197 (298)
T d1n2sa_         193 ADCTA  197 (298)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88763

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=6.2e-24  Score=171.01  Aligned_cols=172  Identities=16%  Similarity=0.098  Sum_probs=131.6

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCC-CCCCCeEEEEcCCCChhhHHHHH
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~-~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .++|++|||||+++||++++++|+++|++|++.+|+.        ++.+.. +++. ..+.++..+.+|+++++++++++
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL--------EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL   74 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHH
Confidence            3678999999999999999999999999999999987        443332 2221 12356888999999999888887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCc
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (249)
                      +       ++|++|||||....     ...+.++..+++|+.++.++.+.+.    +.+ .+++|++||..+...+..  
T Consensus        75 ~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~~--  151 (251)
T d1vl8a_          75 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMP--  151 (251)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSS--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccCc--
Confidence            6       58999999997544     1223345899999999888777664    344 579999999654221110  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         ....|+.||.+.+.+.+.++.+   +|++++.|.||.+.++...
T Consensus       152 -------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~  195 (251)
T d1vl8a_         152 -------------------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE  195 (251)
T ss_dssp             -------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH
T ss_pred             -------------------cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH
Confidence                               1347999999988888887766   4899999999999988653

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.91  E-value=6e-24  Score=173.51  Aligned_cols=171  Identities=20%  Similarity=0.228  Sum_probs=133.2

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      |+.++|++|||||+++||++++++|+++|++|++++|+.        ++++.+.+.  .+.++..+.+|+++++++++++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~l~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~   70 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA--------ERLAELETD--HGDNVLGIVGDVRSLEDQKQAA   70 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHH--HGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHH--cCCCeeEEecccccHHHHHHHH
Confidence            777889999999999999999999999999999999987        555544332  1246889999999999888886


Q ss_pred             c-------CCCEEEEccccCCCC-------CC---ChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeec
Q 025660           81 A-------GCTGVLHVATPVDFE-------DK---EPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFY  139 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-------~~---~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~  139 (249)
                      +       .+|++|||||.....       .+   +.++..+++|+.++.++.+.+.    +.+  +++|++||..+..+
T Consensus        71 ~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~  148 (276)
T d1bdba_          71 SRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYP  148 (276)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTST
T ss_pred             HHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccC
Confidence            5       589999999975431       11   1245889999999888777664    333  68999999765433


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc--CCcEEEeecCeEeCCCCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~vrp~~v~g~~~~~  205 (249)
                      .+.                      ...|+.||.+.+.+.+.++.+.  +++++.|.||.|.++...+
T Consensus       149 ~~~----------------------~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~  194 (276)
T d1bdba_         149 NGG----------------------GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGP  194 (276)
T ss_dssp             TSS----------------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCC
T ss_pred             CCC----------------------CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCc
Confidence            221                      3569999998888888777664  5999999999999886543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.91  E-value=7.3e-24  Score=171.56  Aligned_cols=168  Identities=16%  Similarity=0.131  Sum_probs=133.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ++|++|||||+++||++++++|+++|++|++++|+.        +..+.+ +++...+.++..+.+|++++++++++++ 
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR--------EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS   75 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999987        544433 3334445678999999999998888876 


Q ss_pred             ------CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                            .+|++||+||....      ...+.++..+++|+.++.++.+.+.    +.+ .++||++||..+..+.+.   
T Consensus        76 ~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~---  151 (260)
T d1zema1          76 VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPN---  151 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTT---
T ss_pred             HHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCCcc---
Confidence                  58999999996532      1223345899999999888777664    344 579999999876544322   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                                         ...|+.||...+.+.+.++.+.   |++++.|.||.|.++.
T Consensus       152 -------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~  192 (260)
T d1zema1         152 -------------------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF  192 (260)
T ss_dssp             -------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred             -------------------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcc
Confidence                               3579999998888888877763   7999999999998875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.91  E-value=6e-24  Score=171.85  Aligned_cols=167  Identities=22%  Similarity=0.176  Sum_probs=134.0

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +|.+|||||+++||++++++|+++|++|++.+|+.        ++.+.+ +++...+.++..+++|++|+++++++++  
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~   73 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE--------EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAV   73 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            57889999999999999999999999999999987        444433 3333344578999999999999888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh------cCCcceEEEEcccceeeccCCCcc
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK------SGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~------~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                           ++|++|||||....     ...+.++..+++|+.++.++.+++.+      .+ .+++|++||..+..+.+.   
T Consensus        74 ~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~~---  149 (257)
T d2rhca1          74 VERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVH---  149 (257)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCTT---
T ss_pred             HHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Cccccccccccccccccc---
Confidence                 48999999997654     12233458999999999999998754      23 568999999876443322   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                                         ...|+.||...+.+.+.++.+.   |++++.|.||.|.+|+
T Consensus       150 -------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  190 (257)
T d2rhca1         150 -------------------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM  190 (257)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHH
T ss_pred             -------------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHH
Confidence                               3579999999999998888774   7999999999998765

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.90  E-value=2.6e-23  Score=167.59  Aligned_cols=167  Identities=15%  Similarity=0.075  Sum_probs=129.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|++        ++.+.+.+..  +.+..++.+|++++++++++++  
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~--------~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~   74 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE--------AAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAV   74 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh--CCCeEEEEeecCCHHHHHHHHHHH
Confidence            568999999999999999999999999999999987        5555443221  3467889999999998888876  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                           .+|++|||||....     ...+.++..+++|+.++..+.+.+.+.  ++.++||++||..+..+.+.       
T Consensus        75 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~-------  147 (253)
T d1hxha_          75 QRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ-------  147 (253)
T ss_dssp             HHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT-------
T ss_pred             HHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccc-------
Confidence                 57999999997644     122334589999999988877766542  11479999999876433211       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~  202 (249)
                                     ...|+.||.+.+.+.+.++.+     ++++++.|.||.+.+|.
T Consensus       148 ---------------~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~  190 (253)
T d1hxha_         148 ---------------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             ---------------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             ---------------cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh
Confidence                           357999999888777766544     35999999999998875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.9e-24  Score=170.78  Aligned_cols=171  Identities=16%  Similarity=0.078  Sum_probs=133.7

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      -.+|++|||||+++||++++++|+++|++|++++|+.        ++.+.+ +++...+.++..+.+|++|++++.++++
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~--------~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   76 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK--------HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAK   76 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence            3578999999999999999999999999999999987        555544 2333345678999999999998888876


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             .+|++|||||.....     ..+.++.++++|+.++.++.+.+    ++.+ .++||++||..+..+.+.   
T Consensus        77 ~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~---  152 (244)
T d1yb1a_          77 KVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPF---  152 (244)
T ss_dssp             HHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHH---
T ss_pred             HHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCC---
Confidence                   489999999986551     12233588999999988877755    4445 679999999887543311   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH------cCCcEEEeecCeEeCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE------HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~vrp~~v~g~~~~  204 (249)
                                         ...|+.||++.+.+.+.++.+      .|++++.|.||.|-++...
T Consensus       153 -------------------~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~  198 (244)
T d1yb1a_         153 -------------------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK  198 (244)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred             -------------------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh
Confidence                               346999999888888877664      3799999999999887654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.90  E-value=4.1e-24  Score=175.33  Aligned_cols=200  Identities=17%  Similarity=0.165  Sum_probs=137.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+|||||||||||||++++++|+++||+|++++|+...  .....+...+....  ...++++.+|+.+.+.+.+.++++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~--~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~   77 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTA--SSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNV   77 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCT--TTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCcc--ccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhhhc
Confidence            46789999999999999999999999999999998621  01111122222221  135789999999999999999999


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCC
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (249)
                      +.|+|+++...              ..++.++++++...+ ..++++.||.... .  .      +...         ..
T Consensus        78 ~~vi~~~~~~~--------------~~~~~~~~~a~~~~~-~~~~~~~s~~~~~-~--~------~~~~---------~~  124 (307)
T d1qyca_          78 DVVISTVGSLQ--------------IESQVNIIKAIKEVG-TVKRFFPSEFGND-V--D------NVHA---------VE  124 (307)
T ss_dssp             SEEEECCCGGG--------------SGGGHHHHHHHHHHC-CCSEEECSCCSSC-T--T------SCCC---------CT
T ss_pred             eeeeecccccc--------------cchhhHHHHHHHHhc-cccceeeeccccc-c--c------cccc---------cc
Confidence            99999987532              334557778888888 7888888885421 1  1      1111         01


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCcccccccccccccchhhHHHh
Q 025660          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKICCVMNRSHTLFVYAIAF  243 (249)
Q Consensus       164 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~a~  243 (249)
                      +...+...+...+..    ....+++++++||+++||+.......    .+.....+.....++.+++.++|+|++|+|+
T Consensus       125 ~~~~~~~~~~~~~~~----~~~~~~~~~i~r~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  196 (307)
T d1qyca_         125 PAKSVFEVKAKVRRA----IEAEGIPYTYVSSNCFAGYFLRSLAQ----AGLTAPPRDKVVILGDGNARVVFVKEEDIGT  196 (307)
T ss_dssp             THHHHHHHHHHHHHH----HHHHTCCBEEEECCEEHHHHTTTTTC----TTCSSCCSSEEEEETTSCCEEEEECHHHHHH
T ss_pred             cccccccccccccch----hhccCCCceecccceecCCCccchhh----hhhhhhhcccceeeecccccccCCcHHHHHH
Confidence            122344444444444    34468999999999999986543211    2222333444556688999999999999999


Q ss_pred             hhhcc
Q 025660          244 AFAFN  248 (249)
Q Consensus       244 a~~~~  248 (249)
                      +++..
T Consensus       197 ~~~~~  201 (307)
T d1qyca_         197 FTIKA  201 (307)
T ss_dssp             HHHTT
T ss_pred             HHHHH
Confidence            98643

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.2e-23  Score=165.70  Aligned_cols=204  Identities=14%  Similarity=0.095  Sum_probs=141.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-cCC--CCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLP--GASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~--~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|++|||||+++||+++++.|+++|++|++.+|+.        ++.+.+. ++.  ....++..+.+|+++++++++++
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~--------~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v   80 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV--------GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF   80 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHH
Confidence            568999999999999999999999999999999987        4444432 222  12346888999999999888887


Q ss_pred             c-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcC-CcceEEEEcccceeeccCCC
Q 025660           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSG-TVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~-~~~~~v~~SS~~~~~~~~~~  143 (249)
                      +       ++|++|||||....     ...+.++..+++|+.++.++.+.+.    +.+ ..+++|++||..+....+..
T Consensus        81 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~  160 (257)
T d1xg5a_          81 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS  160 (257)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG
T ss_pred             HHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc
Confidence            6       58999999997644     2234445899999999888766653    332 24799999998753222110


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCCCCCCCCccHHHHHHHH
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~  218 (249)
                                          ....|+.+|...+.+.+.++.+     +++++++|.||.+-++................ 
T Consensus       161 --------------------~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~-  219 (257)
T d1xg5a_         161 --------------------VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT-  219 (257)
T ss_dssp             --------------------GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH-
T ss_pred             --------------------ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhc-
Confidence                                1245999999999888877653     47999999999887654322111212222221 


Q ss_pred             cCCCcccccccccccccchhhHHHhhhhc
Q 025660          219 LGNVKLKICCVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       219 ~~~~~~~~~~~~~~~~~i~v~d~a~a~~~  247 (249)
                                 .....++..+|+|.++.|
T Consensus       220 -----------~~~~r~~~pedvA~~v~f  237 (257)
T d1xg5a_         220 -----------YEQMKCLKPEDVAEAVIY  237 (257)
T ss_dssp             -----------HC---CBCHHHHHHHHHH
T ss_pred             -----------CCCCCCcCHHHHHHHHHH
Confidence                       223345667777777655

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.90  E-value=7.9e-23  Score=164.78  Aligned_cols=171  Identities=14%  Similarity=0.094  Sum_probs=129.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCC-ChhhHHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-HPDGFDAA   79 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~-~~~~~~~~   79 (249)
                      |..++|+||||||+++||++++++|+++|++|+++.|+..     ..+....+... ....++.++.+|++ +.++++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~   74 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-----NPTALAELKAI-NPKVNITFHTYDVTVPVAESKKL   74 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC-----CHHHHHHHHHH-CTTSEEEEEECCTTSCHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcc-----cHHHHHHHHhh-CCCCCEEEEEeecCCCHHHHHHH
Confidence            6778899999999999999999999999999999988871     11222222221 22347889999998 55556666


Q ss_pred             Hc-------CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHh----c--CCcceEEEEcccceeeccCCCccc
Q 025660           80 IA-------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK----S--GTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~----~--~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                      ++       ++|++|||||....  +++ +..+++|+.++.++.+.+.+    .  +..++||++||..++.+.+.    
T Consensus        75 ~~~~~~~~g~iDilvnnAG~~~~--~~~-~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~----  147 (254)
T d1sbya1          75 LKKIFDQLKTVDILINGAGILDD--HQI-ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ----  147 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCT--TCH-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHHHcCCCCEEEeCCCCCCH--HHH-HHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC----
Confidence            54       58999999997543  444 49999999998887776643    2  22468999999887544322    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                        ...|+.||.+...+.+.++.+   +|++++.|.||.|.+|.
T Consensus       148 ------------------~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~  188 (254)
T d1sbya1         148 ------------------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             ------------------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             ------------------CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc
Confidence                              347999999888887777665   38999999999999874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.90  E-value=3.2e-23  Score=165.88  Aligned_cols=199  Identities=20%  Similarity=0.095  Sum_probs=143.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        ++.+.+.+.  .+.++.++++|++++++++++++  
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dls~~~~i~~~~~~i   73 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREE--------RLLAEAVAA--LEAEAIAVVADVSDPKAVEAVFAEA   73 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHT--CCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHH--cCCceEEEEecCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999987        555544332  23478899999999999888776  


Q ss_pred             -----CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcCC-cceEEEEcccceeeccCCCccccCCC
Q 025660           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDET  150 (249)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (249)
                           ++|++||||+....     ...+.++..+++|+.++..+.+.+.+... .+.++++||.... ..+         
T Consensus        74 ~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-~~~---------  143 (241)
T d2a4ka1          74 LEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF---------  143 (241)
T ss_dssp             HHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH---------
T ss_pred             HHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-ccc---------
Confidence                 58999999987544     12233458999999999999998766432 3455555554321 111         


Q ss_pred             CCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCCccccc
Q 025660          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNVKLKIC  227 (249)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (249)
                                   ....|+.+|.+.|.+.+.++.+.   |+++++|.||.+-++........   ...+...        
T Consensus       144 -------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~---~~~~~~~--------  199 (241)
T d2a4ka1         144 -------------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW---AWEQEVG--------  199 (241)
T ss_dssp             -------------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH---HHHHHHH--------
T ss_pred             -------------CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHh---HHHHHHh--------
Confidence                         13469999999999999988875   69999999999988764332111   2222211        


Q ss_pred             ccccccccchhhHHHhhhhc
Q 025660          228 CVMNRSHTLFVYAIAFAFAF  247 (249)
Q Consensus       228 ~~~~~~~~i~v~d~a~a~~~  247 (249)
                       ......+...+|+|.++.|
T Consensus       200 -~~p~~r~~~p~dva~~v~f  218 (241)
T d2a4ka1         200 -ASPLGRAGRPEEVAQAALF  218 (241)
T ss_dssp             -TSTTCSCBCHHHHHHHHHH
T ss_pred             -CCCCCCCcCHHHHHHHHHH
Confidence             1222345567888877765

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.90  E-value=7.8e-23  Score=164.41  Aligned_cols=175  Identities=19%  Similarity=0.178  Sum_probs=129.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHH---CCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLD---HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ||+||||||+++||++++++|++   +|++|++.+|+.        ++.+.++++.....++.++.+|++|+++++++++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   73 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR--------EQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVA   73 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT--------TSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHh
Confidence            56899999999999999999984   689999999998        4444444333334579999999999988877654


Q ss_pred             ---------CCCEEEEccccCCCC------CCChHHHhhhhHHhHHHHHHHHHHh----c----------CCcceEEEEc
Q 025660           82 ---------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLK----S----------GTVKRVVYTS  132 (249)
Q Consensus        82 ---------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~t~~l~~~~~~----~----------~~~~~~v~~S  132 (249)
                               ++|++|||||.....      ..+.++..+++|+.++..+.+.+..    .          ...+++|++|
T Consensus        74 ~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~  153 (248)
T d1snya_          74 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  153 (248)
T ss_dssp             HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             hhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence                     479999999975431      1122447899999998887776532    1          0146899999


Q ss_pred             ccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCCC
Q 025660          133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPK  206 (249)
Q Consensus       133 S~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~~  206 (249)
                      |..+......                   ......|+.||.+...+.+.++.+   .|++++.|.||.|-++.....
T Consensus       154 S~~g~~~~~~-------------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~  211 (248)
T d1snya_         154 SILGSIQGNT-------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS  211 (248)
T ss_dssp             CGGGCSTTCC-------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT
T ss_pred             ccccccCCCC-------------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc
Confidence            9764322111                   001347999999888887777655   389999999999999986544

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.89  E-value=8.1e-23  Score=166.56  Aligned_cols=169  Identities=18%  Similarity=0.131  Sum_probs=128.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh----ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL----KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        ++++.+    ........++..+.+|++++++++++
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNE--------DRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI   74 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHH
Confidence            678999999999999999999999999999999987        444433    22222234688999999999988888


Q ss_pred             Hc-------CCCEEEEccccCCC-----C--CCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccC
Q 025660           80 IA-------GCTGVLHVATPVDF-----E--DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~--~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~  141 (249)
                      ++       ++|++|||||....     .  ..+.++..+++|+.++..+.+++.+    .+ .++++++||.....+.+
T Consensus        75 ~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~~  153 (274)
T d1xhla_          75 INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHS  153 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCT
T ss_pred             HHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccccCC
Confidence            76       58999999996432     1  1123458899999998887776643    34 56788888765432221


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                      .                      ...|+.||.+.+.+.+.++.+   +|++++.|.||.|.+|..
T Consensus       154 ~----------------------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~  196 (274)
T d1xhla_         154 G----------------------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM  196 (274)
T ss_dssp             T----------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHH
T ss_pred             C----------------------CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchh
Confidence            1                      347999999888888877766   489999999999988754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.2e-22  Score=167.15  Aligned_cols=169  Identities=14%  Similarity=0.132  Sum_probs=130.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh----hcc-CC-CCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF----LKN-LP-GASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----l~~-~~-~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        ++.+.    +.. .. ..+.++..+.+|++|+++++
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~--------~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~   82 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKL--------ERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN   82 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHH
Confidence            678999999999999999999999999999999987        44332    221 11 23457889999999999988


Q ss_pred             HHHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccC
Q 025660           78 AAIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~  141 (249)
                      ++++       ++|++|||||....     ...+.++..+++|+.++..+.+++.+    .+ .+++|++||... ...+
T Consensus        83 ~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~-~~~~  160 (297)
T d1yxma1          83 NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTK-AGFP  160 (297)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCT-TCCT
T ss_pred             HHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-cccccccccccc-cccc
Confidence            8876       58999999997544     12233458999999999888877653    33 467888876432 1111


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                                            ....|+.||.+.+.+.+.++.+.   |+++++|.||.|.++...
T Consensus       161 ----------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~  204 (297)
T d1yxma1         161 ----------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAV  204 (297)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGG
T ss_pred             ----------------------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchh
Confidence                                  13579999999999988888764   899999999999988643

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.89  E-value=1e-22  Score=165.80  Aligned_cols=169  Identities=20%  Similarity=0.163  Sum_probs=126.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh----ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL----KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        ++++.+    .+......++..+.+|++++++++++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~--------~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~   75 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSS--------ERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI   75 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHH
Confidence            578999999999999999999999999999999987        444433    22222234688999999999988888


Q ss_pred             Hc-------CCCEEEEccccCCCC------CC---ChHHHhhhhHHhHHHHHHHHHHhc---CCcceEEEEccc-ceeec
Q 025660           80 IA-------GCTGVLHVATPVDFE------DK---EPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSN-AAVFY  139 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~------~~---~~~~~~~~~n~~~t~~l~~~~~~~---~~~~~~v~~SS~-~~~~~  139 (249)
                      ++       ++|++|||||.....      .+   +.++..+++|+.++.++.+++.+.   + ..++|.++|. ....+
T Consensus        76 ~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~~  154 (272)
T d1xkqa_          76 INSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQA  154 (272)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSSC
T ss_pred             HHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccchhccccC
Confidence            76       589999999976431      11   124478899999988877766442   2 2466666654 33222


Q ss_pred             cCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                      .+.                      ...|+.||.+.+.+.+.++.+   +|++++.|.||.|.+++.
T Consensus       155 ~~~----------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~  199 (272)
T d1xkqa_         155 QPD----------------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT  199 (272)
T ss_dssp             CCS----------------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHH
T ss_pred             CCC----------------------cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhh
Confidence            211                      356999999888888877765   489999999999988764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.89  E-value=6.2e-23  Score=166.43  Aligned_cols=171  Identities=18%  Similarity=0.169  Sum_probs=125.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh----ccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL----KNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        ++.+.+    ........++..+.+|++++++++++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~   75 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHA--------ERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI   75 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHH
Confidence            678999999999999999999999999999999987        444433    22222234689999999999988888


Q ss_pred             Hc-------CCCEEEEccccCCC-------C--CCChHHHhhhhHHhHHHHHHHHHHhc--CCcceEEEEcccce-eecc
Q 025660           80 IA-------GCTGVLHVATPVDF-------E--DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAA-VFYN  140 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-------~--~~~~~~~~~~~n~~~t~~l~~~~~~~--~~~~~~v~~SS~~~-~~~~  140 (249)
                      ++       ++|++|||||....       .  ..+.++..+++|+.++.++.+.+.+.  +...++|+++|... ..+.
T Consensus        76 ~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~  155 (264)
T d1spxa_          76 LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT  155 (264)
T ss_dssp             HHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCC
T ss_pred             HHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccC
Confidence            76       58999999997432       0  11334588999999988877766532  11256777776543 2222


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      +.                      ...|+.||.+.+.+.+.++.+   +|++++.|.||.|.++...
T Consensus       156 ~~----------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~  200 (264)
T d1spxa_         156 PD----------------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGS  200 (264)
T ss_dssp             TT----------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--
T ss_pred             CC----------------------chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchh
Confidence            11                      346999999888888887766   4899999999999988654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-22  Score=163.14  Aligned_cols=167  Identities=16%  Similarity=0.073  Sum_probs=127.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC--CCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|++|||||+++||++++++|+++|++|++++|+.        ++.+.+ .++..  .+.++..+.+|+++++++++++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~   73 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL--------EAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF   73 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHH
Confidence            478999999999999999999999999999999987        443332 22211  2347889999999999888887


Q ss_pred             c-------CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHH----hcC--CcceEEEEcccceeeccCCCcccc
Q 025660           81 A-------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL----KSG--TVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        81 ~-------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~----~~~--~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                      +       ++|++|||||....  .++ +..+++|+.++.++.+.+.    +.+  ..++||++||..+..+.+.     
T Consensus        74 ~~~~~~~G~iDilVnnAg~~~~--~~~-~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~-----  145 (254)
T d2gdza1          74 RKVVDHFGRLDILVNNAGVNNE--KNW-EKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-----  145 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCS--SSH-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-----
T ss_pred             HHHHHHcCCcCeeccccccccc--ccc-hheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC-----
Confidence            6       58999999998654  444 4899999988776666553    332  1367999999876443322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHH--HHH---HcCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALE--FAE---EHGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~--~~~---~~~~~~~~vrp~~v~g~~~  203 (249)
                                       ...|+.||.+.+.+.+.  ++.   .+|++++.|.||.|-+|..
T Consensus       146 -----------------~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~  189 (254)
T d2gdza1         146 -----------------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL  189 (254)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHH
T ss_pred             -----------------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhh
Confidence                             35799999988887663  332   2589999999999988753

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=1e-22  Score=164.51  Aligned_cols=172  Identities=16%  Similarity=0.098  Sum_probs=125.4

Q ss_pred             CCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|  +||++++++|+++|++|++.+|++        +..+..++..........+.+|++|+++++++++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE--------RLRPEAEKLAEALGGALLFRADVTQDEELDALFA   78 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcH--------HHHHHHHHhhhccCcccccccccCCHHHHHHHHH
Confidence            678999999987  899999999999999999988876        3322222222222356789999999998888876


Q ss_pred             -------CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  144 (249)
                             ++|++||+|+....         ...+.++..+++|+.++..+.+.+.+.- ..+++|++||..+..+.+.  
T Consensus        79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~--  156 (256)
T d1ulua_          79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK--  156 (256)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT--
T ss_pred             HHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCC--
Confidence                   58999999987432         1112233688999999999998876531 1368999999876433221  


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                          ...|+.||.+.+.+.+.++.+   +|++++.|.||.+.++....
T Consensus       157 --------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~  200 (256)
T d1ulua_         157 --------------------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS  200 (256)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred             --------------------chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccc
Confidence                                457999999999888887776   48999999999998876543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.88  E-value=4.5e-23  Score=166.94  Aligned_cols=182  Identities=18%  Similarity=0.159  Sum_probs=131.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCC-CCCCCeEEEEcCCCChhhHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~-~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |.-++|++|||||+++||++++++|+++|++|++++|+.        ++...+ +++. ..+.++..+.+|+++++++++
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~   76 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA--------ADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTK   76 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC--------TTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHHhCCceEEEEccCCCHHHHHH
Confidence            345689999999999999999999999999999999987        333222 2221 123578899999999999888


Q ss_pred             HHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCC
Q 025660           79 AIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      +++       ++|++|||||....     ...+.++..+++|+.++.++.+.+.    +.+..+.++..||.........
T Consensus        77 ~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~  156 (260)
T d1h5qa_          77 TIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS  156 (260)
T ss_dssp             HHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE
T ss_pred             HHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc
Confidence            876       47999999997544     1223345899999998888776553    3333567777777654222111


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                      ...+               ......|+.||.+.+.+.+.++.+   +|+++++|.||.+.++....
T Consensus       157 ~~~~---------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~  207 (260)
T d1h5qa_         157 SLNG---------------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH  207 (260)
T ss_dssp             ETTE---------------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             cccc---------------CccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc
Confidence            0000               012457999999998888887765   48999999999998886544

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=3.5e-22  Score=159.17  Aligned_cols=162  Identities=15%  Similarity=0.033  Sum_probs=123.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh-hhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~   82 (249)
                      ++|++|||||+++||++++++|+++|++|++.+|+.        +..+..        ..+++.+|+++. +.+.+-+.+
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~--------~~l~~~--------~~~~~~~Dv~~~~~~~~~~~g~   66 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--------ELLKRS--------GHRYVVCDLRKDLDLLFEKVKE   66 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHT--------CSEEEECCTTTCHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHhc--------CCcEEEcchHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999987        443322        246788999874 445555557


Q ss_pred             CCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccCCCCCC
Q 025660           83 CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (249)
Q Consensus        83 ~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (249)
                      +|++|||||....     ...+.++..+++|+.++..+.+.+    ++.+ .+++|++||.....+..            
T Consensus        67 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~------------  133 (234)
T d1o5ia_          67 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE------------  133 (234)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------------
T ss_pred             CcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccccccccccccccccc------------
Confidence            9999999996544     122334588999999877776655    4445 57999999976533221            


Q ss_pred             chhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                ....|+.+|.+.+.+.+.++.+   +|+++++|.||.+.++...
T Consensus       134 ----------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~  177 (234)
T d1o5ia_         134 ----------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK  177 (234)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH
T ss_pred             ----------ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhh
Confidence                      1457999999888888877766   4899999999999887643

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.88  E-value=4.8e-22  Score=160.70  Aligned_cols=171  Identities=22%  Similarity=0.155  Sum_probs=128.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+|++|||||+++||++++++|+++|++|++..|+..       +..+.+ .++...+.++..+.+|++|+++++++++ 
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~   77 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS-------KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK   77 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCCh-------HHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHH
Confidence            5689999999999999999999999999998877651       223322 2333344578899999999998888876 


Q ss_pred             ------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                            .+|++||+||....     ...+.++..+++|+.+..++++.+.+. ...++++.++|......+..       
T Consensus        78 ~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~-------  150 (259)
T d1ja9a_          78 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP-------  150 (259)
T ss_dssp             HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC-------
T ss_pred             HHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCC-------
Confidence                  58999999998654     223444588999999998888887653 11356777776543221100       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                    ....|+.||.+.+.+.+.++.+   +|+++++|.||.+.++.
T Consensus       151 --------------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~  192 (259)
T d1ja9a_         151 --------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  192 (259)
T ss_dssp             --------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChh
Confidence                          1346999999888888887776   38999999999998764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.88  E-value=2.6e-22  Score=163.41  Aligned_cols=172  Identities=14%  Similarity=0.054  Sum_probs=130.6

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .++|++|||||++.||++++++|+++|++|++++|+..       +..+.+ .++...+.++..+.+|+++++++.++++
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~   88 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST-------ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE   88 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCch-------HHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHH
Confidence            35789999999999999999999999999999998761       233322 2233344578899999999998888876


Q ss_pred             -------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccC
Q 025660           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                             .+|++||+++....     ...+.++..+++|+.++..+.+.+.+. ...+++++++|........       
T Consensus        89 ~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~-------  161 (272)
T d1g0oa_          89 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV-------  161 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC-------
T ss_pred             HHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccc-------
Confidence                   57999999997654     223334588999999999999888763 1246788888765321110       


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~  202 (249)
                                    .....|+.+|.+.+.+.+.++.+   +|++++.|.||.+.++.
T Consensus       162 --------------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~  204 (272)
T d1g0oa_         162 --------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM  204 (272)
T ss_dssp             --------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             --------------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChH
Confidence                          12456999999998888887776   48999999999998764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.2e-21  Score=155.45  Aligned_cols=169  Identities=15%  Similarity=0.114  Sum_probs=132.6

Q ss_pred             CC-CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            1 ME-EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         1 m~-~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |. -++|++|||||++.||++++++|+++|++|++.+|++        ++++.+.+.    ..++...+|+.+.+.++..
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~--------~~l~~~~~~----~~~~~~~~d~~~~~~~~~~   68 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE--------SKLQELEKY----PGIQTRVLDVTKKKQIDQF   68 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHGGGGGS----TTEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhc----cCCceeeeecccccccccc
Confidence            54 4678999999999999999999999999999999987        666655443    2578899999998777766


Q ss_pred             Hc---CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHh----cCCcceEEEEcccceeeccCCCcccc
Q 025660           80 IA---GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        80 ~~---~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                      .+   .+|++||+||....     ...+.++..+++|+.++..+.+.+.+    .+ .+++|++||......+       
T Consensus        69 ~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~-------  140 (245)
T d2ag5a1          69 ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKG-------  140 (245)
T ss_dssp             HHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC-------
T ss_pred             ccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCC-------
Confidence            65   68999999998655     12334458999999998888776653    34 5799999986531111       


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~  203 (249)
                                    ......|+.+|...+.+.+.++.+.   |+++++|.||.+.+|..
T Consensus       141 --------------~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~  185 (245)
T d2ag5a1         141 --------------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSL  185 (245)
T ss_dssp             --------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHH
T ss_pred             --------------ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhh
Confidence                          0124579999999999998887774   89999999999998753

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.88  E-value=8.4e-23  Score=164.53  Aligned_cols=163  Identities=11%  Similarity=-0.009  Sum_probs=122.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-----
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-----   81 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   81 (249)
                      ++|||||+++||++++++|+++|++|++.+|+.        +..+.++...     ..+..+|+++.++++++++     
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~--------~~~~~~~~~~-----~~~~~~dv~~~~~~~~~~~~~~~~   68 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESF--------KQKDELEAFA-----ETYPQLKPMSEQEPAELIEAVTSA   68 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG--------GSHHHHHHHH-----HHCTTSEECCCCSHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHhhh-----CcEEEeccCCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999987        3333333221     1234678888877777665     


Q ss_pred             --CCCEEEEccccCCC------CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccCC
Q 025660           82 --GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 --~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                        ++|++|||||....      ...+.++..+++|+.++.++.+++    ++.+ .++||++||..+..+.+.       
T Consensus        69 ~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~-------  140 (252)
T d1zmta1          69 YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKE-------  140 (252)
T ss_dssp             HSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTT-------
T ss_pred             cCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccccccc-------
Confidence              58999999986432      112334488899999887777665    4445 579999999876433321       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                     ...|+.||...+.+.+.++.+   +|+++++|.||.+.++....
T Consensus       141 ---------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~  184 (252)
T d1zmta1         141 ---------------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPY  184 (252)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCS
T ss_pred             ---------------ccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhh
Confidence                           357999999888888887766   48999999999999887544

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.4e-21  Score=160.08  Aligned_cols=176  Identities=18%  Similarity=0.142  Sum_probs=126.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhh-hhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      +|.||||||+++||++++++|+++|.+|+.+.+.....  ...++. +...++...+.++..+.+|++|++++.++++  
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL--KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCG--GGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCCh--hhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhc
Confidence            46789999999999999999999998765554322000  011122 2223444455689999999999999999886  


Q ss_pred             ---CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHH----HhcCCcceEEEEcccceeeccCCCccccCC
Q 025660           82 ---GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (249)
Q Consensus        82 ---~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (249)
                         .+|++||+|+....     ...+.++..+++|+.|+.++.+++    ++.+ .++||++||..+..+.+.       
T Consensus        80 ~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~-------  151 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPF-------  151 (285)
T ss_dssp             TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTT-------
T ss_pred             cccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCC-------
Confidence               37999999997654     222344588999999877766654    4555 689999999876543322       


Q ss_pred             CCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                     ...|+.||.+.+.+.+.++.+   +|+++++|.||.|-++....
T Consensus       152 ---------------~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~  195 (285)
T d1jtva_         152 ---------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK  195 (285)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHH
Confidence                           457999999888888877766   48999999999999886543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.87  E-value=7.3e-22  Score=159.61  Aligned_cols=171  Identities=20%  Similarity=0.200  Sum_probs=130.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC-
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   82 (249)
                      .+++|||||+|+||++++++|+++|+ .|+++.|+..    ..+...+.+.++...+.++.++.+|++|++++.++++. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~----~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGP----DADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGG----GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCcc----CHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            46899999999999999999999998 5788888641    01111222233333456789999999999999998873 


Q ss_pred             -----CCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCC
Q 025660           83 -----CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (249)
Q Consensus        83 -----~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (249)
                           +|.|+|++|....     ...+.++..+.+|+.++.++.+++.+.+ .++||++||..+..+.++          
T Consensus        85 ~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~~----------  153 (259)
T d2fr1a1          85 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG----------  153 (259)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT----------
T ss_pred             cccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCcc----------
Confidence                 6899999997655     1122234778999999999999988877 789999999987655433          


Q ss_pred             CchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCC
Q 025660          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~  203 (249)
                                  ...|+.+|...+.+.+.++. .|++++.|.||.+.+++.
T Consensus       154 ------------~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~  191 (259)
T d2fr1a1         154 ------------LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGM  191 (259)
T ss_dssp             ------------CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC----
T ss_pred             ------------cHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCcc
Confidence                        34699999999999888765 699999999999877653

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.86  E-value=9.7e-21  Score=152.20  Aligned_cols=176  Identities=15%  Similarity=0.151  Sum_probs=124.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      .+|+||||||+++||.+++++|+++|+  .|++.+|+.        ++.+.+.+..  +.+++++.+|+++.++++++++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~--------~~~~~l~~~~--~~~~~~~~~Dvs~~~~v~~~~~   71 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV--------EKATELKSIK--DSRVHVLPLTVTCDKSLDTFVS   71 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSG--------GGCHHHHTCC--CTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCH--------HHHHHHHHhh--CCceEEEEEecCCHHHHHHHHH
Confidence            358999999999999999999999996  688888887        5555555443  3478999999999988877754


Q ss_pred             ---------CCCEEEEccccCCC----C--CCChHHHhhhhHHhHHHHHHHHHHh----cC----------CcceEEEEc
Q 025660           82 ---------GCTGVLHVATPVDF----E--DKEPEEVITQRAINGTLGILKSCLK----SG----------TVKRVVYTS  132 (249)
Q Consensus        82 ---------~~d~vih~a~~~~~----~--~~~~~~~~~~~n~~~t~~l~~~~~~----~~----------~~~~~v~~S  132 (249)
                               .+|++|||||....    .  ..+.++..+++|+.|+.++.+.+.+    .+          ...+++.+|
T Consensus        72 ~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s  151 (250)
T d1yo6a1          72 KVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             HHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             HHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccc
Confidence                     38999999997533    1  1123457899999998888776642    11          125688888


Q ss_pred             ccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCC
Q 025660          133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       133 S~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~  204 (249)
                      |...........     ..          ..|...|+.||++...+.+.++.+.   |++++.|.||.|-++...
T Consensus       152 ~~~~~~~~~~~~-----~~----------~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~  211 (250)
T d1yo6a1         152 SGLGSITDNTSG-----SA----------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG  211 (250)
T ss_dssp             CGGGCSTTCCST-----TS----------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------
T ss_pred             cccccccCCccc-----cc----------chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC
Confidence            765432221111     00          1124569999999988888887763   899999999999888653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=8.4e-22  Score=162.40  Aligned_cols=177  Identities=15%  Similarity=0.098  Sum_probs=129.5

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcc-cCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHH
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE-HRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |+-++|++|||||+++||++++++|+++|++|++.+|+..... .+..+..+.+ .+...   ....+.+|+.+.++.++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~   79 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR---RGGKAVANYDSVEAGEK   79 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH---TTCEEEEECCCGGGHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh---cccccccccchHHHHHH
Confidence            6667899999999999999999999999999999988752111 1112222222 22211   23456788888877666


Q ss_pred             HHc-------CCCEEEEccccCCC-----CCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCC
Q 025660           79 AIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (249)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (249)
                      +++       ++|++|||||....     ...+.++..+++|+.++.++.+.+.    +.+ .++||++||..+..+.+.
T Consensus        80 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~~  158 (302)
T d1gz6a_          80 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFG  158 (302)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCCC
Confidence            654       58999999998654     1223345899999999888777654    445 589999999887554422


Q ss_pred             CccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                                            ...|+.||...+.+.+.++.+   +|+++++|.||.+-.+..
T Consensus       159 ----------------------~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~  200 (302)
T d1gz6a_         159 ----------------------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE  200 (302)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG
T ss_pred             ----------------------cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh
Confidence                                  357999999999888888776   389999999998755543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=3e-21  Score=155.99  Aligned_cols=169  Identities=19%  Similarity=0.150  Sum_probs=130.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHH---CCCeEEEEEcCCCCcccCCchhhhhhc-cC--CCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLD---HGYSVTTTVRSELDPEHRNSKDLSFLK-NL--PGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~--~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ++|.++||||+++||++++++|.+   +|++|++++|+.        ++++.+. ++  ...+.++..+.+|++++++++
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~--------~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~   76 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE--------SMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ   76 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCH--------HHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCH--------HHHHHHHHHHHhhcCCceEEEEEccCCCHHHHH
Confidence            467899999999999999999986   799999999987        5555442 22  122347889999999999988


Q ss_pred             HHHc-----------CCCEEEEccccCCC--------CCCChHHHhhhhHHhHHHHHHHHHHhc----C-CcceEEEEcc
Q 025660           78 AAIA-----------GCTGVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSCLKS----G-TVKRVVYTSS  133 (249)
Q Consensus        78 ~~~~-----------~~d~vih~a~~~~~--------~~~~~~~~~~~~n~~~t~~l~~~~~~~----~-~~~~~v~~SS  133 (249)
                      ++++           .+|++||+||....        ...+.++.++++|+.++.++.+.+.+.    + ..++||++||
T Consensus        77 ~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS  156 (259)
T d1oaaa_          77 RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             HHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccc
Confidence            8864           25799999986432        111234588999999999998888653    1 1358999999


Q ss_pred             cceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-cCCcEEEeecCeEeCCC
Q 025660          134 NAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~vrp~~v~g~~  202 (249)
                      ..+..+.+.                      ...|+.||...+.+.+.++.+ +|++++.|.||.|.+++
T Consensus       157 ~~~~~~~~~----------------------~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~  204 (259)
T d1oaaa_         157 LCALQPYKG----------------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             GGGTSCCTT----------------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred             ccccCCCcc----------------------chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHH
Confidence            876433322                      357999999999999988776 48999999999998874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.85  E-value=1.4e-20  Score=154.71  Aligned_cols=171  Identities=15%  Similarity=0.083  Sum_probs=123.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCC-CCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        ++.+.+ +++. ..+.+...+.+|+++.+++..+++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~--------~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~   95 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM--------DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS   95 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhh
Confidence            458999999999999999999999999999999987        443332 2221 123567899999999998877765


Q ss_pred             -------CCCEEEEccccCCCC-----CCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCCCcc
Q 025660           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (249)
                             ++|++||+||.....     ..+.+...+.+|..+...+...+.    .......++.+||.......+.   
T Consensus        96 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~---  172 (294)
T d1w6ua_          96 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF---  172 (294)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT---
T ss_pred             hhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc---
Confidence                   589999999976541     112233667788877666655432    2232457787877654322211   


Q ss_pred             ccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                                         ...|+.+|.+.+.+.+.++.+   +|+++++|.||.|.++...
T Consensus       173 -------------------~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~  215 (294)
T d1w6ua_         173 -------------------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAF  215 (294)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC----
T ss_pred             -------------------cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhh
Confidence                               346999999999998888776   3899999999999988754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.5e-21  Score=157.85  Aligned_cols=194  Identities=19%  Similarity=0.068  Sum_probs=131.1

Q ss_pred             CCe-EEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            5 KGR-VCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         5 ~~~-vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      +|+ +|||||+++||.+++++|+++ |+.|++.+|+.        ++.+.. +++...+.++.++.+|++|.++++++++
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~   73 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV--------TRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRD   73 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSH--------HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHH
Confidence            344 599999999999999999986 89999999997        444332 3333334578899999999998887765


Q ss_pred             -------CCCEEEEccccCCCC--C---CChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCcc---
Q 025660           82 -------GCTGVLHVATPVDFE--D---KEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVD---  145 (249)
Q Consensus        82 -------~~d~vih~a~~~~~~--~---~~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~---  145 (249)
                             ++|++|||||.....  .   .+.++..+++|+.|+.++.+.+.+. +..+++|++||............   
T Consensus        74 ~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~  153 (275)
T d1wmaa1          74 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQ  153 (275)
T ss_dssp             HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHH
T ss_pred             HHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhh
Confidence                   589999999986541  1   1223478999999999999988763 11469999999765433211100   


Q ss_pred             ------ccCCCCCCc----------hhHhhhcCCCCchHHHHHHHHHHHHHHH----HHH---cCCcEEEeecCeEeCCC
Q 025660          146 ------MMDETFWSD----------VDYIRKLDSWGKSYAISKTLTERAALEF----AEE---HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       146 ------~~~e~~~~~----------~~~~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~---~~~~~~~vrp~~v~g~~  202 (249)
                            ...+.....          .........|...|+.||.....+.+.+    .++   .+++++.+.||.|.++.
T Consensus       154 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m  233 (275)
T d1wmaa1         154 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  233 (275)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             hhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence                  000000000          0000001123567999999776665544    333   28999999999999987


Q ss_pred             CCCC
Q 025660          203 ICPK  206 (249)
Q Consensus       203 ~~~~  206 (249)
                      ..+.
T Consensus       234 ~~~~  237 (275)
T d1wmaa1         234 AGPK  237 (275)
T ss_dssp             TCTT
T ss_pred             ccCc
Confidence            6544

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.1e-20  Score=149.03  Aligned_cols=170  Identities=18%  Similarity=0.165  Sum_probs=127.1

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      -++|++|||||+++||++++++|+++|++|++++|+.        ++.+.+ +++   ........+|+.+.+..++...
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~   71 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPN--------SGGEAQAKKL---GNNCVFAPADVTSEKDVQTALA   71 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT--------SSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHh---CCCccccccccccccccccccc
Confidence            3678999999999999999999999999999999987        443333 222   2367888999999876665544


Q ss_pred             -------CCCEEEEccccCCC-----------CCCChHHHhhhhHHhHHHHHHHHHHhc---------CCcceEEEEccc
Q 025660           82 -------GCTGVLHVATPVDF-----------EDKEPEEVITQRAINGTLGILKSCLKS---------GTVKRVVYTSSN  134 (249)
Q Consensus        82 -------~~d~vih~a~~~~~-----------~~~~~~~~~~~~n~~~t~~l~~~~~~~---------~~~~~~v~~SS~  134 (249)
                             ..|.++++++....           ...+.++..+++|+.++.++.+++.+.         ...++||++||.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~  151 (248)
T d2o23a1          72 LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  151 (248)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             ccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecch
Confidence                   46888888765332           112344588999999999988887542         113589999998


Q ss_pred             ceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCC
Q 025660          135 AAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~  205 (249)
                      .+..+.+.                      ...|+.||.+.+.+.+.++.+.   |++++.|.||.+.++....
T Consensus       152 ~~~~~~~~----------------------~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~  203 (248)
T d2o23a1         152 AAFEGQVG----------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS  203 (248)
T ss_dssp             HHHHCCTT----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred             hhccCCCC----------------------chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc
Confidence            76543322                      4579999999999888887774   8999999999998887543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.4e-20  Score=152.75  Aligned_cols=168  Identities=14%  Similarity=0.050  Sum_probs=127.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhcc-C-CCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-L-PGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+++||++++++|+++|++|++++|+.        ++++.+.. . ...+.....+.+|+.+.+......+
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~--------~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   84 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK--------ETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA   84 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHH
Confidence            578999999999999999999999999999999987        55554422 1 1233467889999999877766654


Q ss_pred             -------CCCEEEEccccCCC---C--CCChHHHhhhhHHhHHHHHHHHHHh---cCCcceEEEEcccceeeccCCCccc
Q 025660           82 -------GCTGVLHVATPVDF---E--DKEPEEVITQRAINGTLGILKSCLK---SGTVKRVVYTSSNAAVFYNDKDVDM  146 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---~--~~~~~~~~~~~n~~~t~~l~~~~~~---~~~~~~~v~~SS~~~~~~~~~~~~~  146 (249)
                             .+|+++|+|+....   .  ..+.++..+++|+.++..+.+.+.+   .+ .+++|++||..+..+.+.    
T Consensus        85 ~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~----  159 (269)
T d1xu9a_          85 QAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPM----  159 (269)
T ss_dssp             HHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTT----
T ss_pred             HHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCC----
Confidence                   57999999987544   1  1223347899999887776665543   22 379999999876443322    


Q ss_pred             cCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCC
Q 025660          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPF  202 (249)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~  202 (249)
                                        ...|+.||++.+.+.+.++.+     .+++++.|.||.|-++.
T Consensus       160 ------------------~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~  202 (269)
T d1xu9a_         160 ------------------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  202 (269)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             ------------------chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH
Confidence                              457999999988888877654     36999999999998874

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=2.1e-20  Score=148.92  Aligned_cols=161  Identities=17%  Similarity=0.137  Sum_probs=118.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ++|+||||||+|+||++++++|+++|++|.+++++..        .         ..........|..+.++.+.+.+  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~~~~   63 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN--------E---------EASASVIVKMTDSFTEQADQVTAEV   63 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC--------T---------TSSEEEECCCCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc--------c---------cccccceeecccCcHHHHHHHHHHH
Confidence            4689999999999999999999999999999998761        1         11123345566665554443322  


Q ss_pred             -------CCCEEEEccccCCC---CCC---ChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCcccc
Q 025660           82 -------GCTGVLHVATPVDF---EDK---EPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMM  147 (249)
Q Consensus        82 -------~~d~vih~a~~~~~---~~~---~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~  147 (249)
                             ++|++|||||....   ..+   +.++..+++|+.++.++.+++.+. +..++||++||..+..+.+.     
T Consensus        64 ~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~-----  138 (236)
T d1dhra_          64 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG-----  138 (236)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-----
T ss_pred             HHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC-----
Confidence                   37999999985332   111   223477899999999888887653 11479999999876433322     


Q ss_pred             CCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH-----cCCcEEEeecCeEeCCCC
Q 025660          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~vrp~~v~g~~~  203 (249)
                                       ...|+.||.+.+.+.+.++.+     +|++++.|.||.+.+|..
T Consensus       139 -----------------~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~  182 (236)
T d1dhra_         139 -----------------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN  182 (236)
T ss_dssp             -----------------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH
T ss_pred             -----------------CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc
Confidence                             357999999999999998765     379999999999998753

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.82  E-value=4.5e-20  Score=146.88  Aligned_cols=159  Identities=17%  Similarity=0.209  Sum_probs=116.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH----
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI----   80 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~----   80 (249)
                      ..+||||||+|+||++++++|+++|++|++++|+..        .         .........+|..+.+......    
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN--------D---------QADSNILVDGNKNWTEQEQSILEQTA   64 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC--------T---------TSSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCch--------h---------cccccceeccccCchhHHHHHHHHHH
Confidence            357999999999999999999999999999999871        1         0112344566766654333222    


Q ss_pred             ---c--CCCEEEEccccCCC---CCC---ChHHHhhhhHHhHHHHHHHHHHhc-CCcceEEEEcccceeeccCCCccccC
Q 025660           81 ---A--GCTGVLHVATPVDF---EDK---EPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (249)
Q Consensus        81 ---~--~~d~vih~a~~~~~---~~~---~~~~~~~~~n~~~t~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (249)
                         +  ++|++|||||....   ...   +.++..+++|+.++..+.+.+.+. +..+++|++||..+..+.+.      
T Consensus        65 ~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~------  138 (235)
T d1ooea_          65 SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS------  138 (235)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------
T ss_pred             HHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc------
Confidence               1  48999999996432   111   233467899999998888877653 11369999999876543322      


Q ss_pred             CCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc-----CCcEEEeecCeEeCCC
Q 025660          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~vrp~~v~g~~  202 (249)
                                      ...|+.||.+.+.+.+.++.+.     +++++.|.||.+.++.
T Consensus       139 ----------------~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~  181 (235)
T d1ooea_         139 ----------------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  181 (235)
T ss_dssp             ----------------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             ----------------ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc
Confidence                            3579999999999999987653     6799999999987764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1.5e-19  Score=145.70  Aligned_cols=172  Identities=13%  Similarity=0.066  Sum_probs=126.3

Q ss_pred             CCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|  +||+++++.|+++|++|++.+|++        +..+.+++..........+..|+.+.++..+.++
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND--------KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFA   75 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST--------TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHhhcCCcceeecccchHHHHHHHHH
Confidence            578999999998  899999999999999999999987        3333333322223356778899999887776664


Q ss_pred             -------CCCEEEEccccCCC----------CCCChHHHhhhhHHhHHHHHHHHHHhcC-CcceEEEEcccceeeccCCC
Q 025660           82 -------GCTGVLHVATPVDF----------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKD  143 (249)
Q Consensus        82 -------~~d~vih~a~~~~~----------~~~~~~~~~~~~n~~~t~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~  143 (249)
                             .+|++||+|+....          ...+.+...+.+|+.+...+.+.+.... ..+.+|++||.....+.+  
T Consensus        76 ~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~--  153 (258)
T d1qsga_          76 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP--  153 (258)
T ss_dssp             HHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--
T ss_pred             HhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC--
Confidence                   36999999987543          1112223566777778888888776532 135788888876432221  


Q ss_pred             ccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCCCCC
Q 025660          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~~~~  205 (249)
                                          ....|+.||.+.+.+.+.++.+.   |+++++|+||.|.++....
T Consensus       154 --------------------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~  198 (258)
T d1qsga_         154 --------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG  198 (258)
T ss_dssp             --------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG
T ss_pred             --------------------CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccc
Confidence                                13579999999999988887774   7999999999999987544

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.81  E-value=2.1e-19  Score=150.93  Aligned_cols=194  Identities=15%  Similarity=0.030  Sum_probs=131.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh-HHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-FDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~   82 (249)
                      ++|+|+|||||||||++++++|+++||+|+++.|+..      ......+...    .+++++.+|++|+.+ +..++..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~------~~~~~~~~~~----~~v~~~~gD~~d~~~~~~~a~~~   71 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK------GLIAEELQAI----PNVTLFQGPLLNNVPLMDTLFEG   71 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC------SHHHHHHHTS----TTEEEEESCCTTCHHHHHHHHTT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcc------hhhhhhhccc----CCCEEEEeeCCCcHHHHHHHhcC
Confidence            5789999999999999999999999999999999871      1222333332    368999999999654 6778888


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcC
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (249)
                      +|.+++.....           ...++..+.++++++.+.+ +++++++||.........                    
T Consensus        72 ~~~~~~~~~~~-----------~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~~--------------------  119 (350)
T d1xgka_          72 AHLAFINTTSQ-----------AGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYGP--------------------  119 (350)
T ss_dssp             CSEEEECCCST-----------TSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTSS--------------------
T ss_pred             CceEEeecccc-----------cchhhhhhhHHHHHHHHhC-CCceEEEeeccccccCCc--------------------
Confidence            89888765432           1235667889999999998 788888888653221111                    


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHcCCcEEEeecCeEeCCCCCCCCCccHHHHHHHHcCCC-c-ccccccccccccchh-h
Q 025660          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNV-K-LKICCVMNRSHTLFV-Y  239 (249)
Q Consensus       163 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~i~v-~  239 (249)
                      .+...|..+|...+..+..    .+++++++||+..++.......+.+.   ......+. . ..+.+++....++++ +
T Consensus       120 ~~~~~~~~~k~~~~~~~~~----~~~~~~~vr~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~  192 (350)
T d1xgka_         120 WPAVPMWAPKFTVENYVRQ----LGLPSTFVYAGIYNNNFTSLPYPLFQ---MELMPDGTFEWHAPFDPDIPLPWLDAEH  192 (350)
T ss_dssp             CCCCTTTHHHHHHHHHHHT----SSSCEEEEEECEEGGGCBSSSCSSCB---EEECTTSCEEEEESSCTTSCEEEECHHH
T ss_pred             ccchhhhhhHHHHHHHHHh----hccCceeeeeceeecccccccccccc---ccccccccceeeecccCCCcceEEEeHH
Confidence            1234577788777766544    57999999999988765433222110   00011111 1 223456667777765 7


Q ss_pred             HHHhhhh
Q 025660          240 AIAFAFA  246 (249)
Q Consensus       240 d~a~a~~  246 (249)
                      |++.+++
T Consensus       193 Dva~~v~  199 (350)
T d1xgka_         193 DVGPALL  199 (350)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877653

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.78  E-value=2.4e-18  Score=139.71  Aligned_cols=172  Identities=11%  Similarity=0.054  Sum_probs=114.3

Q ss_pred             CCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc
Q 025660            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (249)
                      ++|++|||||+|  +||.+++++|+++|++|++++|++        +..+.+.++...+....++.+|+++.++..++++
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~--------~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~   75 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE--------SLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYN   75 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST--------TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHhhCCceeEeeecccchhhHHHHHH
Confidence            678999999876  799999999999999999999986        3222332222223456788999999988777764


Q ss_pred             -------CCCEEEEccccCCC------CCCChHHHhhhh---HHhHHHHHHHHHHhcCCcce-EEEEcccceeeccCCCc
Q 025660           82 -------GCTGVLHVATPVDF------EDKEPEEVITQR---AINGTLGILKSCLKSGTVKR-VVYTSSNAAVFYNDKDV  144 (249)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~---n~~~t~~l~~~~~~~~~~~~-~v~~SS~~~~~~~~~~~  144 (249)
                             .+|++||+++....      ...+........   +......+...+.+...... ++.+|+.......    
T Consensus        76 ~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~----  151 (274)
T d2pd4a1          76 SVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM----  151 (274)
T ss_dssp             HHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----
T ss_pred             HHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc----
Confidence                   57999999997544      011111122222   22234444444443321334 4444444322111    


Q ss_pred             cccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCCC
Q 025660          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICP  205 (249)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~~  205 (249)
                                        .....|+.+|...+.+.+.++.+   +|+++++|.||.+.++....
T Consensus       152 ------------------~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~  197 (274)
T d2pd4a1         152 ------------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG  197 (274)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG
T ss_pred             ------------------ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccc
Confidence                              12457999999999888877665   48999999999999887543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.77  E-value=6.4e-18  Score=134.48  Aligned_cols=158  Identities=23%  Similarity=0.215  Sum_probs=117.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc----
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   81 (249)
                      |++|||||+++||++++++|+++|++|++++|+..                   ..+.....+|+++......+..    
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-------------------~~~~~~~~~d~~~~~~~~~~~~~~~~   62 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------------GEDLIYVEGDVTREEDVRRAVARAQE   62 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------------SSSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc-------------------cccceEeeccccchhhhHHHHHhhhc
Confidence            78999999999999999999999999999999871                   1145678899999877666654    


Q ss_pred             --CCCEEEEccccCCC---------CCCChHHHhhhhHHhHHHHHHHHHHhc---------CCcceEEEEcccceeeccC
Q 025660           82 --GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS---------GTVKRVVYTSSNAAVFYND  141 (249)
Q Consensus        82 --~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~t~~l~~~~~~~---------~~~~~~v~~SS~~~~~~~~  141 (249)
                        ..+.++++++....         ...+.++..+++|+.+...+.+.+...         +..++||++||..+..+.+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~  142 (241)
T d1uaya_          63 EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI  142 (241)
T ss_dssp             HSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT
T ss_pred             cccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC
Confidence              23555665553221         112334477899988887777665321         1146899999987654432


Q ss_pred             CCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      .                      ...|+.+|.+.+.+.+.++.+   +|++++.|.||.+.++...
T Consensus       143 ~----------------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~  186 (241)
T d1uaya_         143 G----------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ  186 (241)
T ss_dssp             T----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH
T ss_pred             C----------------------chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccc
Confidence            2                      457999999999888888776   4899999999999887643

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.75  E-value=1.5e-17  Score=135.55  Aligned_cols=165  Identities=13%  Similarity=0.027  Sum_probs=112.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh----ccCCC---------------CCCCeEE
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL----KNLPG---------------ASERLRI   65 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l----~~~~~---------------~~~~~~~   65 (249)
                      ++.+|||||+++||++++++|+++|++|++.+|+..       +..+.+    .....               .......
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~   74 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA-------AEANALSATLNARRPNSAITVQADLSNVATAPVSGAD   74 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC---
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCH-------HHHHHHHHHHHhhcCCceEEEEeeccccccccccccc
Confidence            568999999999999999999999999999888751       222222    11100               1112344


Q ss_pred             EEcCCCChhhHHHHHc-------CCCEEEEccccCCCC------CCCh-------------HHHhhhhHHhHHHHHHHHH
Q 025660           66 FHADLSHPDGFDAAIA-------GCTGVLHVATPVDFE------DKEP-------------EEVITQRAINGTLGILKSC  119 (249)
Q Consensus        66 ~~~Dl~~~~~~~~~~~-------~~d~vih~a~~~~~~------~~~~-------------~~~~~~~n~~~t~~l~~~~  119 (249)
                      +.+|+++.++++++++       ++|++|||||.....      .+++             +...+.+|+.++..+.+.+
T Consensus        75 ~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  154 (284)
T d1e7wa_          75 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  154 (284)
T ss_dssp             -CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccc
Confidence            5677888888888765       589999999976431      1111             1135788888888888765


Q ss_pred             Hhc---------CCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cC
Q 025660          120 LKS---------GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HG  187 (249)
Q Consensus       120 ~~~---------~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~  187 (249)
                      .+.         +...++|+++|.....+..                      ....|+.||...+.+.+.++.+   +|
T Consensus       155 ~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~~----------------------~~~~Y~asKaal~~lt~~lA~el~~~g  212 (284)
T d1e7wa_         155 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLL----------------------GYTIYTMAKGALEGLTRSAALELAPLQ  212 (284)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             cchhhhhHHHhcCCCCcccccccccccCCcc----------------------ceeeeccccccchhhhHHHHHHhCCcc
Confidence            431         2235788888866432221                      1357999999999888888766   48


Q ss_pred             CcEEEeecCeE
Q 025660          188 LDLVTLIPSMV  198 (249)
Q Consensus       188 ~~~~~vrp~~v  198 (249)
                      ++++.|.||.+
T Consensus       213 IrvN~I~PG~t  223 (284)
T d1e7wa_         213 IRVNGVGPGLS  223 (284)
T ss_dssp             EEEEEEEESSB
T ss_pred             ccccccccccc
Confidence            99999999964

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.73  E-value=1.1e-17  Score=135.19  Aligned_cols=167  Identities=11%  Similarity=-0.004  Sum_probs=115.1

Q ss_pred             CCCeEEEeccc--hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhh-hhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ++|++|||||+  .+||.+++++|.++|++|++.+|+.        ++. +.+.+..  +.+...+++|++++++...++
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~--------~~~~~~~~~~~--~~~~~~~~~dv~~~~~~~~~~   74 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR--------LRLIQRITDRL--PAKAPLLELDVQNEEHLASLA   74 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSC--------HHHHHHHHTTS--SSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCCh--------HHHHHHHHHHc--CCceeeEeeeccccccccccc
Confidence            67899999964  4699999999999999999999987        433 3444332  345678999999997666654


Q ss_pred             c----------CCCEEEEccccCCC---CC-----C--ChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccceeecc
Q 025660           81 A----------GCTGVLHVATPVDF---ED-----K--EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYN  140 (249)
Q Consensus        81 ~----------~~d~vih~a~~~~~---~~-----~--~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~~~~~~  140 (249)
                      +          .+|+++|+|+..+.   ..     .  +.+...+..|........+..........++.++|.......
T Consensus        75 ~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~  154 (268)
T d2h7ma1          75 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM  154 (268)
T ss_dssp             HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC
T ss_pred             chhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccC
Confidence            3          36999999996532   11     1  111244556666666666666554323345555544322221


Q ss_pred             CCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHHc---CCcEEEeecCeEeCCC
Q 025660          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (249)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~vrp~~v~g~~  202 (249)
                      +                      ....|+.+|.+.+.+.+.++.+.   |++++.|.||.+.++.
T Consensus       155 p----------------------~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~  197 (268)
T d2h7ma1         155 P----------------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLA  197 (268)
T ss_dssp             T----------------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHH
T ss_pred             c----------------------ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChh
Confidence            1                      13579999999999888877763   7999999999998764

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.70  E-value=4.4e-16  Score=125.42  Aligned_cols=169  Identities=16%  Similarity=0.138  Sum_probs=108.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCC-CCCCeEEEEcCCCCh----hhHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHP----DGFDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~~~~Dl~~~----~~~~~~   79 (249)
                      +++|||||+++||++++++|+++|++|++++|+..       +..+.+ +++.. ...+......|..+.    +.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE-------GAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDI   74 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch-------HHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHH
Confidence            47899999999999999999999999999999861       222222 11111 223566666666543    333333


Q ss_pred             Hc-------CCCEEEEccccCCCCC----------------CChHHHhhhhHHhHHHHHHHHHHhc--------CCcceE
Q 025660           80 IA-------GCTGVLHVATPVDFED----------------KEPEEVITQRAINGTLGILKSCLKS--------GTVKRV  128 (249)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~~----------------~~~~~~~~~~n~~~t~~l~~~~~~~--------~~~~~~  128 (249)
                      ++       .+|++|||||......                +......+..|..+...........        .....+
T Consensus        75 ~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (266)
T d1mxha_          75 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV  154 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccc
Confidence            32       5899999999754310                0011234455555555554444321        112456


Q ss_pred             EEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCC
Q 025660          129 VYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (249)
Q Consensus       129 v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~  203 (249)
                      +.+|+.......+                      ....|+.||...+.+.+.++.+   +|++++.|.||.+.++..
T Consensus       155 ~~~~~~~~~~~~~----------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~  210 (266)
T d1mxha_         155 VNLCDAMTDLPLP----------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA  210 (266)
T ss_dssp             EEECCGGGGSCCT----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS
T ss_pred             hhhhhccccccCc----------------------chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc
Confidence            6666655322211                      1457999999999888887766   489999999999887754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.69  E-value=1.6e-15  Score=124.17  Aligned_cols=179  Identities=9%  Similarity=-0.017  Sum_probs=110.0

Q ss_pred             CCCCCCeEEEeccch--hhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc-------cCCC--CCCCe-EEEEc
Q 025660            1 MEEGKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-------NLPG--ASERL-RIFHA   68 (249)
Q Consensus         1 m~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-------~~~~--~~~~~-~~~~~   68 (249)
                      |..++|++|||||+|  +||++++++|+++|++|++.+|+..     .......+.       ....  ..... ....+
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA-----LNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPL   78 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH-----HHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEE
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh-----hhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhh
Confidence            345779999999886  8999999999999999999988640     000000000       0000  00111 12222


Q ss_pred             C--C------------------CChhhHHHHH-------cCCCEEEEccccCCC-------CCCChHHHhhhhHHhHHHH
Q 025660           69 D--L------------------SHPDGFDAAI-------AGCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLG  114 (249)
Q Consensus        69 D--l------------------~~~~~~~~~~-------~~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~  114 (249)
                      |  +                  .+..+.++++       .++|++||+||....       ...+.+...+++|+.+...
T Consensus        79 ~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~  158 (297)
T d1d7oa_          79 DAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVS  158 (297)
T ss_dssp             CTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             hhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhh
Confidence            2  2                  2222222332       368999999987432       1122234889999999999


Q ss_pred             HHHHHHhcC-CcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHH----HHHHcCCc
Q 025660          115 ILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE----FAEEHGLD  189 (249)
Q Consensus       115 l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~  189 (249)
                      +.+++.... ..++++.+++.........                     ....|+.+|...+.+.+.    +..++|++
T Consensus       159 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------------------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIr  217 (297)
T d1d7oa_         159 LLSHFLPIMNPGGASISLTYIASERIIPG---------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIR  217 (297)
T ss_dssp             HHHHHGGGEEEEEEEEEEECGGGTSCCTT---------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             hhhHHHHHhhcCCcceeeeehhhcccccc---------------------cccceecccccccccccccchhccccceEE
Confidence            999887642 1245666666543211111                     134699999877666554    33345899


Q ss_pred             EEEeecCeEeCCCCCC
Q 025660          190 LVTLIPSMVVGPFICP  205 (249)
Q Consensus       190 ~~~vrp~~v~g~~~~~  205 (249)
                      ++.|.||.+.++....
T Consensus       218 vN~I~PG~i~T~~~~~  233 (297)
T d1d7oa_         218 VNTISAGPLGSRAAKA  233 (297)
T ss_dssp             EEEEEECCCBCCCSSC
T ss_pred             ecccccccccchhhhh
Confidence            9999999999987643

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.66  E-value=7.4e-16  Score=128.08  Aligned_cols=171  Identities=7%  Similarity=0.018  Sum_probs=112.1

Q ss_pred             CCeEEEec--cchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhh----------hccCCCCCCCeEEEEc----
Q 025660            5 KGRVCVTG--GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF----------LKNLPGASERLRIFHA----   68 (249)
Q Consensus         5 ~~~vlItG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----------l~~~~~~~~~~~~~~~----   68 (249)
                      .|.+||||  ++++||++++++|.++|.+|++..+...     .......          +..............+    
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPV-----YNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASF   76 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGG-----HHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTC
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchh-----hhhhhHHHHHHhhhhHHHHHHHhhhhhhhccccccee
Confidence            57899999  5579999999999999999999887641     0000000          0000000111223333    


Q ss_pred             ----------------CCCChhhHHHHHc-------CCCEEEEccccCCC-------CCCChHHHhhhhHHhHHHHHHHH
Q 025660           69 ----------------DLSHPDGFDAAIA-------GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKS  118 (249)
Q Consensus        69 ----------------Dl~~~~~~~~~~~-------~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~t~~l~~~  118 (249)
                                      |+.+.++++.+++       ++|++||+||....       ...+.+...+++|+.++..+.+.
T Consensus        77 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~  156 (329)
T d1uh5a_          77 DTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKY  156 (329)
T ss_dssp             SSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             hhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHH
Confidence                            4445555554443       68999999986542       11223447899999999988888


Q ss_pred             HHhc-CCcceEEEEcccceeeccCCCccccCCCCCCchhHhhhcCCCCchHHHHHHHHHHHHHHHHHH----cCCcEEEe
Q 025660          119 CLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTL  193 (249)
Q Consensus       119 ~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~v  193 (249)
                      +.+. +..+++|.+||..+....+                     .+...|+.+|...+.+.+.++.+    +|++++.|
T Consensus       157 ~~~~m~~~GsIv~iss~~~~~~~p---------------------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI  215 (329)
T d1uh5a_         157 FVNIMKPQSSIISLTYHASQKVVP---------------------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTI  215 (329)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCT---------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred             HHhhcccccccccceeehhccccc---------------------ccchhhhhhhccccccchhhHHHHhcccCcEEEEE
Confidence            8764 2246899999876432211                     11346999999888777766543    58999999


Q ss_pred             ecCeEeCC
Q 025660          194 IPSMVVGP  201 (249)
Q Consensus       194 rp~~v~g~  201 (249)
                      .||.|-++
T Consensus       216 ~PG~i~T~  223 (329)
T d1uh5a_         216 SAGPLKSR  223 (329)
T ss_dssp             EECCCCCT
T ss_pred             ecCcccch
Confidence            99998774

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.65  E-value=3.3e-15  Score=119.66  Aligned_cols=173  Identities=20%  Similarity=0.128  Sum_probs=104.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      ||.||||||+++||++++++|+++|++|++++|+..                 +       ...|+.+.+.......   
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~-----------------~-------~~~d~~~~~~~~~~~~~~~   56 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA-----------------E-------VIADLSTAEGRKQAIADVL   56 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS-----------------S-------EECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH-----------------H-------HHHHhcCHHHHHHHHHHHH
Confidence            568999999999999999999999999999999861                 0       2467777765444322   


Q ss_pred             -----CCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHH----hcCCcceEEEEcccceeeccCC-CccccCCCC
Q 025660           82 -----GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK-DVDMMDETF  151 (249)
Q Consensus        82 -----~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~-~~~~~~e~~  151 (249)
                           .+|.++|+|+....  .+.+.....+|..+...+.+...    +.. ......+++......... .........
T Consensus        57 ~~~~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (257)
T d1fjha_          57 AKCSKGMDGLVLCAGLGPQ--TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             TTCTTCCSEEEECCCCCTT--CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             HHhCCCCcEEEEcCCCCCc--HHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccC
Confidence                 47999999997554  33344677788877766665443    333 455666665432211100 000000000


Q ss_pred             CCchhH--hhhc---CCCCchHHHHHHHHHHHHHHHHHH---cCCcEEEeecCeEeCCCCC
Q 025660          152 WSDVDY--IRKL---DSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (249)
Q Consensus       152 ~~~~~~--~~~~---~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~vrp~~v~g~~~~  204 (249)
                      ......  ....   ..+...|+.||.+.+.+.+.++.+   +|++++.|.||.+.+|...
T Consensus       134 g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~  194 (257)
T d1fjha_         134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ  194 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------
T ss_pred             CcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHH
Confidence            000000  0000   001235999999998888877655   4899999999999888654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.43  E-value=1.4e-14  Score=110.98  Aligned_cols=103  Identities=13%  Similarity=0.020  Sum_probs=75.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|+++||||+|+||+++++.|+++|++|++++|+.        ++.+.+.+......++.+..+|+++.+++++++.++
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i   93 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL--------DKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA   93 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccch--------HHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCc
Confidence            578999999999999999999999999999999997        555444222111124567889999999999999999


Q ss_pred             CEEEEccccCCC-CCCChHHHhhhhHHhHHHH
Q 025660           84 TGVLHVATPVDF-EDKEPEEVITQRAINGTLG  114 (249)
Q Consensus        84 d~vih~a~~~~~-~~~~~~~~~~~~n~~~t~~  114 (249)
                      |+|||+||.... ...+.++..+.+|+.+..+
T Consensus        94 Dilin~Ag~g~~~~~~e~~~~~~~~nv~~~~~  125 (191)
T d1luaa1          94 HFVFTAGAIGLELLPQAAWQNESSIEIVADYN  125 (191)
T ss_dssp             SEEEECCCTTCCCBCHHHHHTCTTCCEEEECC
T ss_pred             CeeeecCccccccCCHHHHHhhhcceeehhHh
Confidence            999999986432 1122222445555544433

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.68  E-value=1.3e-07  Score=67.95  Aligned_cols=114  Identities=14%  Similarity=0.099  Sum_probs=78.9

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      ||.|+||+|.+|++++-.|..+|.  ++++++.++        .+...+. +.... .......- ....+..+.++++|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~--------~~~~a~D-l~~~~-~~~~~~~~-~~~~~~~~~~~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--------TPGVAAD-LSHIE-TRATVKGY-LGPEQLPDCLKGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--------HHHHHHH-HTTSS-SSCEEEEE-ESGGGHHHHHTTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccc--------cchhhHH-Hhhhh-hhcCCCeE-EcCCChHHHhCCCC
Confidence            799999999999999999998884  889998865        3333221 11100 11111111 23456677889999


Q ss_pred             EEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      +||.+||.......+.. ..+..|....+.+++.+.+.+ ...++.+-|
T Consensus        71 ivVitag~~~~~g~sR~-~ll~~N~~i~~~i~~~i~~~~-p~~iiivvt  117 (144)
T d1mlda1          71 VVVIPAGVPRKPGMTRD-DLFNTNATIVATLTAACAQHC-PDAMICIIS  117 (144)
T ss_dssp             EEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred             EEEECCCcCCCCCCCcc-hHHHHHHHHHHHHHHHHHhcC-CCeEEEEec
Confidence            99999997443323333 889999999999999999998 455555554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.55  E-value=9.4e-08  Score=67.72  Aligned_cols=71  Identities=13%  Similarity=0.073  Sum_probs=59.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d   84 (249)
                      |+|+|.|+ |.+|+.+++.|.+.|++|+++++++        ++.+.+.+..    +..++.||.++++.+.++ ++++|
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~--------~~~~~~~~~~----~~~vi~Gd~~~~~~l~~~~i~~a~   67 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK--------DICKKASAEI----DALVINGDCTKIKTLEDAGIEDAD   67 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHC----SSEEEESCTTSHHHHHHTTTTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCCh--------hhhhhhhhhh----hhhhccCcccchhhhhhcChhhhh
Confidence            48999996 9999999999999999999999998        6666654321    467899999999999888 56788


Q ss_pred             EEEEc
Q 025660           85 GVLHV   89 (249)
Q Consensus        85 ~vih~   89 (249)
                      .++-+
T Consensus        68 ~vv~~   72 (132)
T d1lssa_          68 MYIAV   72 (132)
T ss_dssp             EEEEC
T ss_pred             hhccc
Confidence            88854

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.49  E-value=5e-07  Score=64.92  Aligned_cols=112  Identities=13%  Similarity=0.168  Sum_probs=74.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~   77 (249)
                      +.+||.|+|+ |.+|+.++..|+.+|  .+++++++++        ++.+.    +...........+..+|.   +   
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~--------~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~---   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK--------DRTKGDALDLEDAQAFTAPKKIYSGEY---S---   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHGGGGGSCCCEEEECCG---G---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeeccc--------chhHHHHHHHhccccccCCceEeeccH---H---
Confidence            4568999995 999999999999987  5999999886        32221    221111122344556553   2   


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                       .+.++|+||.+||.......+. ......|..-.+.+++.+.+.. .+.++.+-|
T Consensus        69 -~~~~adivvitag~~~~~g~~r-~~l~~~N~~i~~~~~~~i~~~~-p~aivivvt  121 (146)
T d1ez4a1          69 -DCKDADLVVITAGAPQKPGESR-LDLVNKNLNILSSIVKPVVDSG-FDGIFLVAA  121 (146)
T ss_dssp             -GGTTCSEEEECCCC-----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred             -HhccccEEEEecccccCCCCCH-HHHHHHHHHHHHHHHHHHhhcC-CCcEEEEeC
Confidence             2568999999998654322223 3788899999999999999988 555655555

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.48  E-value=1.3e-06  Score=62.93  Aligned_cols=114  Identities=20%  Similarity=0.252  Sum_probs=76.8

Q ss_pred             CCC-CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccC-CCCCCCeEEEEcCCCC
Q 025660            1 MEE-GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNL-PGASERLRIFHADLSH   72 (249)
Q Consensus         1 m~~-~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~-~~~~~~~~~~~~Dl~~   72 (249)
                      |++ .++||.|+|| |.+|+.++..|+.+|.  ++.++++++        ++.+.    +... ........+...|.  
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~--------~~~~g~a~Dl~~~~~~~~~~~~~~~~d~--   69 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANE--------SKAIGDAMDFNHGKVFAPKPVDIWHGDY--   69 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHHHTTSSSSCCEEEECCG--
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecc--------ccccchhccHhhCccccCCCeEEEECCH--
Confidence            544 3478999996 9999999999999874  899999876        33111    2111 11122344445543  


Q ss_pred             hhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEE
Q 025660           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (249)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~  131 (249)
                       +    .++++|+||.+||.......... +.+..|..-.+.+++.+.+..+...++.+
T Consensus        70 -~----~l~daDvvvitag~~~~~~~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~~ivv  122 (148)
T d1ldna1          70 -D----DCRDADLVVICAGANQKPGETRL-DLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (148)
T ss_dssp             -G----GTTTCSEEEECCSCCCCTTTCSG-GGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             -H----HhccceeEEEecccccccCcchh-HHHHHHHHHHHHHHHHHHhhCCCceEEEe
Confidence             2    35689999999997554223333 78899999999999999998733344443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.47  E-value=4.2e-07  Score=67.24  Aligned_cols=75  Identities=21%  Similarity=0.241  Sum_probs=60.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      .|+|+|.|| |++|+.+++.|.++||+|++++|+.        ++.+.+.+..   ........+..+.......+...|
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~--------~~a~~l~~~~---~~~~~~~~~~~~~~~~~~~i~~~~   69 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTL--------ESAKKLSAGV---QHSTPISLDVNDDAALDAEVAKHD   69 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCH--------HHHHHHHTTC---TTEEEEECCTTCHHHHHHHHTTSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCh--------HHHHHHHhcc---cccccccccccchhhhHhhhhccc
Confidence            478999986 9999999999999999999999998        6777665432   245566677888888888888888


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      .++.+..
T Consensus        70 ~~i~~~~   76 (182)
T d1e5qa1          70 LVISLIP   76 (182)
T ss_dssp             EEEECSC
T ss_pred             eeEeecc
Confidence            8885543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.46  E-value=2e-06  Score=61.61  Aligned_cols=114  Identities=11%  Similarity=0.037  Sum_probs=75.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhh----hhccC-CCCCCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLS----FLKNL-PGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~----~l~~~-~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |||.|+||+|.+|+.++..|..++  .++.++++++.      ..+.+    .+... .......++....-.+.+    
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~------~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~----   70 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS------INKLEGLREDIYDALAGTRSDANIYVESDENLR----   70 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG------HHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhh------hHhhhcccccchhcccccccCCccccCCcchHH----
Confidence            479999999999999999999998  49999998751      01111    12211 112223333222111222    


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEE
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~  131 (249)
                      .++++|+||-+||.......+.. +.+..|..-.+.+++.+.+.. .+.++.+
T Consensus        71 ~l~~aDvVVitAG~~~~~g~sR~-dl~~~Na~iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          71 IIDESDVVIITSGVPRKEGMSRM-DLAKTNAKIVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             GGTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred             HhccceEEEEecccccCCCCChh-hhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence            45689999999997544333343 889999999999999999887 4555433

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.43  E-value=1.8e-06  Score=61.80  Aligned_cols=115  Identities=16%  Similarity=0.105  Sum_probs=73.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC-C--CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH-G--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      |||.|+|++|.+|++++-.|..+ +  .++.+++..+.     .......+...... .....+ ..   .+.++ .+++
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-----~~g~a~Dl~h~~~~-~~~~~~-~~---~~~~~-~~~~   69 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-----TPGVAVDLSHIPTA-VKIKGF-SG---EDATP-ALEG   69 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-----HHHHHHHHHTSCSS-CEEEEE-CS---SCCHH-HHTT
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-----chhHHHHHHCCccc-cCCcEE-Ec---CCCcc-ccCC
Confidence            47999999999999999887543 4  68999987551     11111122222111 112222 12   22232 5779


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEc
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~S  132 (249)
                      .|+||.+||.......+.. +.+..|..-.+.+.+.+.+..+...++.+|
T Consensus        70 aDvvvitaG~~~k~g~~R~-dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          70 ADVVLISAGVRRKPGMDRS-DLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CSEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCEEEECCCccCCCCcchh-hHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            9999999997544323333 889999999999999999987333444444

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.41  E-value=1.5e-07  Score=68.41  Aligned_cols=117  Identities=11%  Similarity=0.037  Sum_probs=77.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhh----ccCCC-CCCCeEEEEcCCCChh
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFL----KNLPG-ASERLRIFHADLSHPD   74 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l----~~~~~-~~~~~~~~~~Dl~~~~   74 (249)
                      |+.+++||.|+|+ |.+|+.++..|..++. ++++++.++        ++.+..    ..... ......     +....
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~--------~~~~g~a~Dl~~~~~~~~~~~~-----~~~~~   68 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVK--------GMPEGKALDLSHVTSVVDTNVS-----VRAEY   68 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS--------SHHHHHHHHHHHHHHHTTCCCC-----EEEEC
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecc--------ccchhHHHHHhhhccccCCeeE-----EeccC
Confidence            5667889999997 9999999988888774 899998876        222211    11100 000111     11123


Q ss_pred             hHHHHHcCCCEEEEccccCCCCC-----CChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           75 GFDAAIAGCTGVLHVATPVDFED-----KEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ..++.++++|+||-+||......     .+.. .....|..-.+.+++.+.+.. ...++.+-|
T Consensus        69 ~~~~~~~~adiVvitag~~~~~g~~~~~~tR~-~l~~~n~~iv~~i~~~i~~~~-p~aiviivs  130 (154)
T d1pzga1          69 SYEAALTGADCVIVTAGLTKVPGKPDSEWSRN-DLLPFNSKIIREIGQNIKKYC-PKTFIIVVT  130 (154)
T ss_dssp             SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGG-GGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred             chhhhhcCCCeEEEecccccCCCCCCcccchh-hhhhhhHHHHHHHHHHHHhcC-CCcEEEEeC
Confidence            34567789999999998754311     1223 778899999999999999988 455655555

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.39  E-value=5.1e-07  Score=63.82  Aligned_cols=72  Identities=14%  Similarity=0.112  Sum_probs=58.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d   84 (249)
                      |+++|.|+ |.+|+++++.|.+.|++|++++.++        ++.+.+.+.     ....+.+|.++++.+.++ ++++|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~--------~~~~~~~~~-----~~~~~~gd~~~~~~l~~a~i~~a~   66 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE--------EKVNAYASY-----ATHAVIANATEENELLSLGIRNFE   66 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH--------HHHHHTTTT-----CSEEEECCTTCTTHHHHHTGGGCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcH--------HHHHHHHHh-----CCcceeeecccchhhhccCCcccc
Confidence            46889985 8899999999999999999999988        666665433     346788999999999888 77899


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      .||-+..
T Consensus        67 ~vi~~~~   73 (134)
T d2hmva1          67 YVIVAIG   73 (134)
T ss_dssp             EEEECCC
T ss_pred             EEEEEcC
Confidence            8774444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.35  E-value=4.5e-06  Score=59.51  Aligned_cols=114  Identities=9%  Similarity=0.093  Sum_probs=71.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +||.|+|+ |.+|+.++-.|+.++.  ++.++++++.    ........+..............+|   .+    .++++
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~----~~~g~a~Dl~~~~~~~~~~~~~~~~---~~----~~~~a   69 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKE----KAIGEAMDINHGLPFMGQMSLYAGD---YS----DVKDC   69 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC-------CCHHHHHHTTSCCCTTCEEEC--C---GG----GGTTC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCC----ccceeeeeeccCcccCCCeeEeeCc---HH----HhCCC
Confidence            57999996 9999999999999874  8999998872    0111111222221222233333332   22    36689


Q ss_pred             CEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      |+||-+||.......+.. .....|..-.+.+++.+.+.. .+.++.+-|
T Consensus        70 divvitag~~~~~~~~r~-~l~~~N~~i~~~i~~~i~~~~-p~ai~ivvt  117 (142)
T d1y6ja1          70 DVIVVTAGANRKPGETRL-DLAKKNVMIAKEVTQNIMKYY-NHGVILVVS  117 (142)
T ss_dssp             SEEEECCCC------CHH-HHHHHHHHHHHHHHHHHHHHC-CSCEEEECS
T ss_pred             ceEEEecccccCcCcchh-HHhhHHHHHHHHHHHHhhccC-CCceEEEec
Confidence            999999997544333343 789999999999999999987 444444444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.26  E-value=6.9e-06  Score=58.42  Aligned_cols=112  Identities=13%  Similarity=0.017  Sum_probs=75.2

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhh----hhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      ||.|+||+|.+|+.++-.|..++.  ++.++++...      .+..+    .+...........+..+|.   +    .+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~------~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK------EDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DT   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG------HHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GG
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCc------ccccceeecchhhcccccCCceEeeCCH---H----Hh
Confidence            799999999999999999999984  7888886430      01111    1211111123444555543   2    24


Q ss_pred             cCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      .++|+||-+||.......+.. +.++.|..-.+.+.+.+.+.. .+.++.+-|
T Consensus        69 ~~aDiVvitaG~~~~~g~~R~-dl~~~N~~I~~~i~~~i~~~~-p~~i~ivvt  119 (142)
T d1o6za1          69 AGSDVVVITAGIPRQPGQTRI-DLAGDNAPIMEDIQSSLDEHN-DDYISLTTS  119 (142)
T ss_dssp             TTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHTTC-SCCEEEECC
T ss_pred             hhcCEEEEecccccccCCchh-hHHHHHHHHHHHHHHHHHhcC-CCceEEEec
Confidence            699999999996543333343 899999999999999999988 444544443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.12  E-value=1.2e-06  Score=62.64  Aligned_cols=111  Identities=11%  Similarity=0.004  Sum_probs=73.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hccCCC-CCCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNLPG-ASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~-~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |||.|+|| |.+|+.++..|..++  .++.++++++        ++...    +..... ......+...  .+.+    
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~--------~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----   65 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVE--------GIPQGKALDMYESGPVGLFDTKVTGS--NDYA----   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSS--------SHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEecccc--------ccchhhhhhhhcccchhcccceEEec--CCHH----
Confidence            47999996 999999999999987  5999999887        22221    111110 1122333322  2222    


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      .++++|+||-+||.......+.. .....|..-.+.+++.+.+.. ..-++.+-|
T Consensus        66 ~~~dadvvvitag~~~~~g~~r~-~l~~~N~~i~~~i~~~i~~~~-p~aivivvt  118 (142)
T d1guza1          66 DTANSDIVIITAGLPRKPGMTRE-DLLMKNAGIVKEVTDNIMKHS-KNPIIIVVS  118 (142)
T ss_dssp             GGTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC-SSCEEEECC
T ss_pred             HhcCCeEEEEEEecCCCCCCchH-HHHHHHHHHHHHHHHHhhccC-CCeEEEEec
Confidence            35789999999997544323333 788999999999999999887 445555444

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.12  E-value=3.3e-05  Score=55.86  Aligned_cols=112  Identities=17%  Similarity=0.096  Sum_probs=75.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhh----hhccCC-CCCCCeEEEEcCCCChhhH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNLP-GASERLRIFHADLSHPDGF   76 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~l~~~~-~~~~~~~~~~~Dl~~~~~~   76 (249)
                      +.+||-|+|+ |.+|+.++..|..+|.  ++.++++++        +..+    .+.... ..........+|..     
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~--------~~a~g~alDl~h~~~~~~~~~~~~~~d~~-----   84 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLE--------DKLKGEMMDLQHGSLFLQTPKIVADKDYS-----   84 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH--------HHHHHHHHHHHHTGGGCCCSEEEECSSGG-----
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecc--------chhHHHHHHHhccccccCCCeEEeccchh-----
Confidence            3468999996 9999999999999985  899999875        2221    122111 11122222333332     


Q ss_pred             HHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                        .++++|+||.+||.......+.. .....|..-.+.+++.+.+.. .+.++.+-|
T Consensus        85 --~~~~adiVVitAg~~~~~g~tR~-~l~~~N~~i~~~i~~~i~~~~-p~aiiivvt  137 (160)
T d1i0za1          85 --VTANSKIVVVTAGVRQQEGESRL-NLVQRNVNVFKFIIPQIVKYS-PDCIIIVVS  137 (160)
T ss_dssp             --GGTTCSEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHC-TTCEEEECS
T ss_pred             --hcccccEEEEecCCccccCcchH-HHHHHHHHHHHHHHHHHHhcC-CCcEEEEeC
Confidence              25689999999997554333333 788999999999999999987 444444444

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.11  E-value=1e-06  Score=65.88  Aligned_cols=34  Identities=35%  Similarity=0.486  Sum_probs=32.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |||.|+||+|.+|++|++.|++.||+|++.+|++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~   34 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            4789998899999999999999999999999987

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.08  E-value=5e-06  Score=60.12  Aligned_cols=119  Identities=19%  Similarity=0.061  Sum_probs=71.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC----e-E--EEEEcCCCCcccCCchhhhhhc-cCC-CCCCCeEEEEcCCCChh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY----S-V--TTTVRSELDPEHRNSKDLSFLK-NLP-GASERLRIFHADLSHPD   74 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~----~-V--~~~~r~~~~~~~~~~~~~~~l~-~~~-~~~~~~~~~~~Dl~~~~   74 (249)
                      +.++|.|+||+|++|+.++..|...+.    + +  .+++-..      ..+..+.+. +.. ........+...    .
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~----~   72 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ------AMKALEGVVMELEDCAFPLLAGLEAT----D   72 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG------GHHHHHHHHHHHHTTTCTTEEEEEEE----S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhcccc------chhhHcCchhhhhccccccccccccC----C
Confidence            456999999999999999999988753    1 1  2222221      112222211 111 111122222222    2


Q ss_pred             hHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           75 GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ...+.++++|+||-+||.......+. .+.+..|..-.+.+.+.+.+..+..-+|.+-|
T Consensus        73 ~~~~~~~~advViitaG~~~~pg~~r-~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          73 DPKVAFKDADYALLVGAAPRKAGMER-RDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             CHHHHTTTCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             chhhhcccccEEEeecCcCCCCCCcH-HHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            33457889999999999865433333 38889999999999999998642334444433

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.06  E-value=4.3e-05  Score=54.26  Aligned_cols=111  Identities=14%  Similarity=0.152  Sum_probs=74.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      .||.|+|+ |.+|++++-.|+.+|.  ++.++++++        ++.+.    +...........+...+  +.+    .
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~--------~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~----~   66 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAK--------ERVEAEVLDMQHGSSFYPTVSIDGSD--DPE----I   66 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH--------HHHHHHHHHHHHTGGGSTTCEEEEES--CGG----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecc--------ccchhHHHHHHhccccCCCceeecCC--CHH----H
Confidence            47999996 9999999999999984  899999876        33221    22221111122332221  112    2


Q ss_pred             HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ++++|+||-+||.......+.. +.+..|..-.+.+++.+.+.. ...++.+-|
T Consensus        67 ~~daDvVVitaG~~~~~g~~R~-dl~~~N~~i~~~i~~~i~~~~-p~ai~ivvt  118 (143)
T d1llda1          67 CRDADMVVITAGPRQKPGQSRL-ELVGATVNILKAIMPNLVKVA-PNAIYMLIT  118 (143)
T ss_dssp             GTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             hhCCcEEEEecccccCCCCchh-hhhhhhHHHHHHHHHHHHhhC-CCeEEEEeC
Confidence            5689999999997554333344 789999999999999999988 445555444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.05  E-value=2.3e-05  Score=55.50  Aligned_cols=110  Identities=16%  Similarity=0.115  Sum_probs=73.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      +||.|+|| |.+|+.++..|+.++  .++.++++++        ++.+.    +..............+|.   +    .
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~--------~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~----~   64 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDK--------KRAEGDALDLIHGTPFTRRANIYAGDY---A----D   64 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHHHGGGSCCCEEEECCG---G----G
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeccc--------ccccchhccccccccccccccccCCcH---H----H
Confidence            47999996 899999999888887  4899999876        22221    111111112334444432   2    2


Q ss_pred             HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ++++|+||-+||.......... +.+..|..-.+.+++.+.+.. ...++.+-|
T Consensus        65 ~~~adivvitag~~~~~g~~r~-dl~~~N~~I~~~i~~~i~~~~-p~aivivvt  116 (140)
T d1a5za1          65 LKGSDVVIVAAGVPQKPGETRL-QLLGRNARVMKEIARNVSKYA-PDSIVIVVT  116 (140)
T ss_dssp             GTTCSEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEECS
T ss_pred             hcCCCEEEEecccccCCCcchh-hhhccccchHHHHHHHHHhcC-CCcEEEEeC
Confidence            5689999999997554323333 788899999999999999988 455555544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.02  E-value=4.5e-06  Score=61.64  Aligned_cols=115  Identities=11%  Similarity=-0.005  Sum_probs=71.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC---C----eEEEEEcCCCCcccCCchhhhhh----ccCCCCCCCeEEEEcCCCChh
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG---Y----SVTTTVRSELDPEHRNSKDLSFL----KNLPGASERLRIFHADLSHPD   74 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g---~----~V~~~~r~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~Dl~~~~   74 (249)
                      -+|.||||+|.||+.++..|.+..   .    +++.++...      .....+.+    +....  .....+..    ..
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~------~~~~l~g~~mdl~d~a~--~~~~~~~~----~~   92 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSER------SFQALEGVAMELEDSLY--PLLREVSI----GI   92 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG------GHHHHHHHHHHHHTTTC--TTEEEEEE----ES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcc------ccchhcchhhhhccccc--ccccCccc----cc
Confidence            479999999999999999998743   1    444555443      11122221    11111  11221111    12


Q ss_pred             hHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           75 GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ...+.++++|+||-+||......... .+.+..|..-.+.+.+.+.+..+..-+|.+-|
T Consensus        93 ~~~~~~~~aDvVvi~ag~~rkpg~tR-~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          93 DPYEVFEDVDWALLIGAKPRGPGMER-AALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             CHHHHTTTCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cchhhccCCceEEEeeccCCCCCCcH-HHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            34566789999999999755433333 48999999999999999999642334444443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.98  E-value=2.3e-05  Score=55.91  Aligned_cols=111  Identities=13%  Similarity=0.098  Sum_probs=72.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hccC-CCCCCCeEEEEcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNL-PGASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~~-~~~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      |||.|+|+ |.+|+.++-.|+.+|  .++.++++++        ++.+.    +... ............|   .+    
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~--------~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~----   65 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANE--------AKVKADQIDFQDAMANLEAHGNIVIND---WA----   65 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHHHGGGSSSCCEEEESC---GG----
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeccc--------chhhhHHHhhhccccccCCccceeccC---HH----
Confidence            68999995 999999999999887  4899999876        33221    2111 1112233444444   22    


Q ss_pred             HHcCCCEEEEccccCCCCC---CChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           79 AIAGCTGVLHVATPVDFED---KEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~---~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      .++++|+||-+||......   ..........|..-.+.+.+.+.+.. ...++.+-|
T Consensus        66 ~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~-p~aivivvt  122 (146)
T d1hyha1          66 ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVIS  122 (146)
T ss_dssp             GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred             HhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEec
Confidence            2568999999999654211   11112567889999999999999887 455555554

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.97  E-value=2.9e-05  Score=56.18  Aligned_cols=111  Identities=14%  Similarity=0.114  Sum_probs=73.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCCCCcccCCchhhh----hhccCCC-CCCCeEEEEcCCCChhhHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNLPG-ASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~l~~~~~-~~~~~~~~~~Dl~~~~~~~   77 (249)
                      ..||.|+|+ |.+|+.++..|..+|.  ++.++++++        ++.+    .+..... ..........|.   +   
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~--------~~a~g~alDl~~~~~~~~~~~~~~~~d~---~---   83 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADT--------DKLRGEALDLQHGSLFLSTPKIVFGKDY---N---   83 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCH--------HHHHHHHHHHHHTTTTCSCCEEEEESSG---G---
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCc--------hhhhccHHHHhCcchhcCCCeEEeccch---h---
Confidence            357999996 9999999999999985  899999876        3322    1222111 112222333333   2   


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                       .+.++|+||.+||.......+.. ..++.|..-.+.+++.+.+.+ .+.++.+-|
T Consensus        84 -~~~~adivvitag~~~~~~~~R~-dll~~N~~i~~~i~~~i~~~~-p~~ivivvt  136 (159)
T d2ldxa1          84 -VSANSKLVIITAGARMVSGQTRL-DLLQRNVAIMKAIVPGVIQNS-PDCKIIVVT  136 (159)
T ss_dssp             -GGTTEEEEEECCSCCCCTTTCSS-CTTHHHHHHHHHHTTTHHHHS-TTCEEEECS
T ss_pred             -hhccccEEEEecccccCCCCCHH-HHHHHHHHHHHHHHHHHhccC-CCeEEEEeC
Confidence             34689999999987554322333 678899999999999998887 344444433

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=1.4e-05  Score=57.09  Aligned_cols=35  Identities=20%  Similarity=0.296  Sum_probs=27.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-C---eEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-Y---SVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~---~V~~~~r~~   39 (249)
                      |++|.|.||||++|+.+++.|+++. +   +++.+.++.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            4589999999999999999988864 3   566665543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.87  E-value=5.2e-05  Score=53.75  Aligned_cols=110  Identities=13%  Similarity=0.055  Sum_probs=73.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCCCCcccCCchhhhh----hccC-CCCCCCeEEE-EcCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNL-PGASERLRIF-HADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----l~~~-~~~~~~~~~~-~~Dl~~~~~~~   77 (249)
                      |||.|+|+ |.+|+.++..|..+|  .++.++++++        ++.+.    +... ........+. ..|.   +   
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~--------~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~---   65 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAE--------DLAVGEAMDLAHAAAGIDKYPKIVGGADY---S---   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSH--------HHHHHHHHHHHHHHHTTTCCCEEEEESCG---G---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEeccc--------chhhHHHHHHhhhccccCCCCccccCCCH---H---
Confidence            47999996 999999999999887  4899999876        33221    1111 0111122222 2232   2   


Q ss_pred             HHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                       .++++|+||-+||.......+.. .....|..-.+.+.+.+.+.. ...++.+-|
T Consensus        66 -~~~~adiVvitag~~~~~g~~r~-~l~~~n~~i~~~i~~~i~~~~-p~aivivvt  118 (142)
T d1ojua1          66 -LLKGSEIIVVTAGLARKPGMTRL-DLAHKNAGIIKDIAKKIVENA-PESKILVVT  118 (142)
T ss_dssp             -GGTTCSEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHTTS-TTCEEEECS
T ss_pred             -HhccccEEEEeccccCCCCCchH-HHHHHhhHHHHHHHHHHHhhC-CCcEEEEec
Confidence             46689999999986544333344 888999999999999999987 445555554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.85  E-value=8e-06  Score=58.74  Aligned_cols=39  Identities=18%  Similarity=0.411  Sum_probs=36.1

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+.++++|.|+||.|.+|+++++.|.+.||+|.+++|+.
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~   43 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   43 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence            556778999999999999999999999999999999987

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.82  E-value=3.4e-05  Score=57.05  Aligned_cols=78  Identities=14%  Similarity=0.106  Sum_probs=56.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      .+.+|||+||+|.+|...++-....|.+|+++++++        ++.+.+.+...   ...+..-|-...+.+.+...  
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~--------~~~~~~~~~Ga---~~vi~~~~~~~~~~~~~~~~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD--------EKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCH--------HHHHHHHhhhh---hhhcccccccHHHHHHHHhhcC
Confidence            457999999999999999998888899999999987        66666665532   22233333333444444444  


Q ss_pred             CCCEEEEcccc
Q 025660           82 GCTGVLHVATP   92 (249)
Q Consensus        82 ~~d~vih~a~~   92 (249)
                      ++|+|+++.|.
T Consensus        98 Gvd~v~D~vG~  108 (182)
T d1v3va2          98 GYDCYFDNVGG  108 (182)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCceeEEecCc
Confidence            48999998873

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.80  E-value=5.4e-06  Score=59.07  Aligned_cols=110  Identities=11%  Similarity=0.056  Sum_probs=67.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhh----hccCCC-CCCCeEEE-EcCCCChhhHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSF----LKNLPG-ASERLRIF-HADLSHPDGFDA   78 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~----l~~~~~-~~~~~~~~-~~Dl~~~~~~~~   78 (249)
                      +||-|+|+ |.+|+.++-.|..++. ++.+++.++        ++...    +..... ......+. ..|..       
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~--------~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~-------   65 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVE--------GVPQGKALDLYEASPIEGFDVRVTGTNNYA-------   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSS--------SHHHHHHHHHHTTHHHHTCCCCEEEESCGG-------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeecc--------ccchhHHHHhhccccccCCCCEEEecCcHH-------
Confidence            58999996 9999999998888874 899998876        22211    111100 01111222 22222       


Q ss_pred             HHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      .+++.|+||-+||.......+. ...+..|..-.+.+++.+.+.. ...++.+.|
T Consensus        66 ~~~~advvvitag~~~~~~~~r-~dl~~~N~~i~~~i~~~i~k~~-p~aivivvt  118 (142)
T d1uxja1          66 DTANSDVIVVTSGAPRKPGMSR-EDLIKVNADITRACISQAAPLS-PNAVIIMVN  118 (142)
T ss_dssp             GGTTCSEEEECCSCC----------CHHHHHHHHHHHHHHHGGGC-TTCEEEECS
T ss_pred             HhcCCCEEEEeeeccCCcCcch-hHHHhHHHHHHHHHHHHHhccC-CCceEEEeC
Confidence            2468999999999754322222 3678899999999999999987 455555544

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.78  E-value=6.5e-06  Score=59.50  Aligned_cols=119  Identities=17%  Similarity=-0.009  Sum_probs=70.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-----C--eEEEEEcCCCCcccCCchhhhhhc-cCC-CCCCCeEEEEcCCCChh
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-----Y--SVTTTVRSELDPEHRNSKDLSFLK-NLP-GASERLRIFHADLSHPD   74 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~~~~~~l~-~~~-~~~~~~~~~~~Dl~~~~   74 (249)
                      +.++|.|+||+|.+|++++..|+..+     .  +++.++.+.      ...+.+.+. +.. ........+.+    ..
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~------~~~~~~~l~~~~~~~~~~~~~~~~~----~~   71 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP------MMGVLDGVLMELQDCALPLLKDVIA----TD   71 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG------GHHHHHHHHHHHHHTCCTTEEEEEE----ES
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc------chhhhhhhhhhhccccccccccccc----Cc
Confidence            45699999999999999999998654     1  344444433      112222221 000 01112222222    12


Q ss_pred             hHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           75 GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ...+.++++|+||-++|.......+.. +.+..|..-.+.+.+.+.+..+..-++.+-|
T Consensus        72 ~~~~~~~~~dvVVitag~~~~~g~sr~-dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          72 KEEIAFKDLDVAILVGSMPRRDGMERK-DLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             CHHHHTTTCSEEEECCSCCCCTTCCTT-TTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccccccCCceEEEEecccCCCCCCchh-HHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            234567899999999997554222232 6789999999999999987541333344433

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.75  E-value=3.5e-05  Score=55.77  Aligned_cols=72  Identities=19%  Similarity=0.145  Sum_probs=54.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ++++|||+|+ |-+|+.+++.|...|. ++++..|+.        ++...+.....    .+     ....+++.+.+.+
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~--------~ka~~l~~~~~----~~-----~~~~~~~~~~l~~   84 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY--------ERAVELARDLG----GE-----AVRFDELVDHLAR   84 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH--------HHHHHHHHHHT----CE-----ECCGGGHHHHHHT
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcH--------HHHHHHHHhhh----cc-----cccchhHHHHhcc
Confidence            4679999997 9999999999999997 688888886        55554433211    11     2344677888899


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      +|+||.+.+..
T Consensus        85 ~Divi~atss~   95 (159)
T d1gpja2          85 SDVVVSATAAP   95 (159)
T ss_dssp             CSEEEECCSSS
T ss_pred             CCEEEEecCCC
Confidence            99999987753

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=4.3e-05  Score=56.06  Aligned_cols=74  Identities=12%  Similarity=0.102  Sum_probs=53.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHH---HHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD---AAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~---~~~   80 (249)
                      .+.+|||+||+|.+|...++-+...|.+|+++++++        ++.+.+.++..    .++  .|.++.+..+   +..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~--------~~~~~~~~~Ga----~~v--i~~~~~~~~~~i~~~t   93 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTE--------EGQKIVLQNGA----HEV--FNHREVNYIDKIKKYV   93 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC----SEE--EETTSTTHHHHHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccc--------cccccccccCc----ccc--cccccccHHHHhhhhh
Confidence            456899999999999999999888899999999876        56666655532    122  3555544333   333


Q ss_pred             c--CCCEEEEccc
Q 025660           81 A--GCTGVLHVAT   91 (249)
Q Consensus        81 ~--~~d~vih~a~   91 (249)
                      .  .+|+|+.+.+
T Consensus        94 ~~~g~d~v~d~~g  106 (174)
T d1yb5a2          94 GEKGIDIIIEMLA  106 (174)
T ss_dssp             CTTCEEEEEESCH
T ss_pred             ccCCceEEeeccc
Confidence            3  4899998876

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.70  E-value=6.9e-05  Score=55.11  Aligned_cols=76  Identities=14%  Similarity=0.006  Sum_probs=50.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC---CCCCeEEEEcCCCChhhHHHHHcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG---ASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      |+|.|+| +|-+|.+++..|.++||+|.+++|++        ++.+.+.....   ................+..+.+++
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~   72 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDA--------QRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD   72 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcC
Confidence            6899999 59999999999999999999999987        44444322110   001111222222222346778889


Q ss_pred             CCEEEEcc
Q 025660           83 CTGVLHVA   90 (249)
Q Consensus        83 ~d~vih~a   90 (249)
                      +|+||-+.
T Consensus        73 aD~iii~v   80 (184)
T d1bg6a2          73 ADVILIVV   80 (184)
T ss_dssp             CSEEEECS
T ss_pred             CCEEEEEE
Confidence            99999754

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=3.5e-05  Score=57.06  Aligned_cols=80  Identities=11%  Similarity=0.068  Sum_probs=58.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccC---CCCCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNL---PGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      +.++|+|.|+ |+.|++++..|.+.|. ++++..|+.        +..+.+..+   ............|+.+.+.+.+.
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRD--------EFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEA   87 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS--------TTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccch--------HHHHHHHHHHHHHHhhcCcceEeeecccccchhhh
Confidence            4579999995 7799999999999986 788889987        332222111   01111344667899999999999


Q ss_pred             HcCCCEEEEcccc
Q 025660           80 IAGCTGVLHVATP   92 (249)
Q Consensus        80 ~~~~d~vih~a~~   92 (249)
                      +..+|+|||+-..
T Consensus        88 ~~~~diiIN~Tp~  100 (182)
T d1vi2a1          88 LASADILTNGTKV  100 (182)
T ss_dssp             HHTCSEEEECSST
T ss_pred             hcccceeccccCC
Confidence            9999999999754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=3.9e-05  Score=55.54  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=31.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |||+|+|+ |.+|+.++..|.+.||+|++++|+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~   33 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVP   33 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCH
Confidence            58999996 9999999999999999999999987

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.66  E-value=5.2e-05  Score=55.52  Aligned_cols=74  Identities=18%  Similarity=0.134  Sum_probs=51.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+.+|||+||+|.+|...++-+...|.+|+++++++        ++.+.++++-.   . +.  .|..+.......-.++
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~--------~~~~~~~~lGa---~-~~--i~~~~~~~~~~~~~g~   92 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP--------EKLALPLALGA---E-EA--ATYAEVPERAKAWGGL   92 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG--------GGSHHHHHTTC---S-EE--EEGGGHHHHHHHTTSE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccc--------ccccccccccc---c-ee--eehhhhhhhhhccccc
Confidence            457899999999999999998888899999999887        55555555422   1 12  2333332222333469


Q ss_pred             CEEEEccc
Q 025660           84 TGVLHVAT   91 (249)
Q Consensus        84 d~vih~a~   91 (249)
                      |+|+++.|
T Consensus        93 D~v~d~~G  100 (171)
T d1iz0a2          93 DLVLEVRG  100 (171)
T ss_dssp             EEEEECSC
T ss_pred             cccccccc
Confidence            99999876

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=0.00011  Score=56.09  Aligned_cols=76  Identities=12%  Similarity=0.086  Sum_probs=53.6

Q ss_pred             CCCeEEEecc----------------chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE
Q 025660            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (249)
Q Consensus         4 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   67 (249)
                      ++++||||+|                ||..|.+|++++..+|++|+++.-...                ......+..+.
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~----------------~~~p~~~~~~~   68 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS----------------LPTPPFVKRVD   68 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC----------------CCCCTTEEEEE
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc----------------cCcccccccce
Confidence            5688999987                599999999999999999999876541                11122455544


Q ss_pred             cCCCC--hhhHHHHHcCCCEEEEccccCCC
Q 025660           68 ADLSH--PDGFDAAIAGCTGVLHVATPVDF   95 (249)
Q Consensus        68 ~Dl~~--~~~~~~~~~~~d~vih~a~~~~~   95 (249)
                      ..-.+  .+.+.+.++++|++|++|+..++
T Consensus        69 ~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          69 VMTALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CCSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             ehhhHHHHHHHHhhhccceeEeeeechhhh
Confidence            43211  13344455689999999998776

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.64  E-value=5.5e-05  Score=55.78  Aligned_cols=74  Identities=20%  Similarity=0.129  Sum_probs=53.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+.+|||+||+|.+|...++-+...|.+|+++++++        ++.+.+.+...   . ++  .|..+++   .+.+..
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~--------~~~~~l~~~Ga---~-~v--i~~~~~~~~~~v~~~t   90 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD--------AKREMLSRLGV---E-YV--GDSRSVDFADEILELT   90 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHTTCC---S-EE--EETTCSTHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccc--------ccccccccccc---c-cc--ccCCccCHHHHHHHHh
Confidence            357899999999999999998888899999999887        66666665422   1 22  2444443   344333


Q ss_pred             c--CCCEEEEccc
Q 025660           81 A--GCTGVLHVAT   91 (249)
Q Consensus        81 ~--~~d~vih~a~   91 (249)
                      .  ++|+++.+.|
T Consensus        91 ~~~g~d~v~d~~g  103 (183)
T d1pqwa_          91 DGYGVDVVLNSLA  103 (183)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCEEEEEeccc
Confidence            2  5899999887

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=2.5e-05  Score=49.18  Aligned_cols=36  Identities=31%  Similarity=0.441  Sum_probs=32.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++.+|||+||+|.+|...++-+...|.+|+++++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~   66 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCH
Confidence            356899999999999999998888899999999987

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=0.00021  Score=51.02  Aligned_cols=75  Identities=23%  Similarity=0.311  Sum_probs=57.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhh-hhccCCCCCCCeEEEEcCCCChhhHHHH-HcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~   82 (249)
                      +.+|+|.|. |-+|..+++.|.++|++|++++.++        ++.. .++....  .++.++.||.++++.+.++ +++
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~--------~~~~~~~~~~~~--~~~~vi~Gd~~d~~~L~~a~i~~   71 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLP--------EDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAGIDR   71 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC--------HHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHTTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccc--------hhHHHHHHHhhc--CCcEEEEccCcchHHHHHhcccc
Confidence            457999985 7899999999999999999999887        4322 2222211  2678999999999988777 467


Q ss_pred             CCEEEEcc
Q 025660           83 CTGVLHVA   90 (249)
Q Consensus        83 ~d~vih~a   90 (249)
                      ++.||-+.
T Consensus        72 a~~vi~~~   79 (153)
T d1id1a_          72 CRAILALS   79 (153)
T ss_dssp             CSEEEECS
T ss_pred             CCEEEEcc
Confidence            89888554

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=4.8e-05  Score=55.96  Aligned_cols=75  Identities=8%  Similarity=-0.007  Sum_probs=54.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhh---HHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG---FDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~---~~~~~   80 (249)
                      .+.+|||+||+|.+|..+++-....|.+|+++++++        ++.+.+.++..    -++  .|.++++.   +.++-
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~--------~k~~~~~~lGa----~~v--i~~~~~d~~~~v~~~t   93 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA--------QKAQSALKAGA----WQV--INYREEDLVERLKEIT   93 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHHHTC----SEE--EETTTSCHHHHHHHHT
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccch--------HHHHHHHhcCC----eEE--EECCCCCHHHHHHHHh
Confidence            356899999999999999998888899999999998        67766665532    122  35555443   33333


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  .+|+|+.+.+.
T Consensus        94 ~g~g~d~v~d~~g~  107 (179)
T d1qora2          94 GGKKVRVVYDSVGR  107 (179)
T ss_dssp             TTCCEEEEEECSCG
T ss_pred             CCCCeEEEEeCccH
Confidence            3  47999988874

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.56  E-value=2.6e-05  Score=56.68  Aligned_cols=33  Identities=24%  Similarity=0.300  Sum_probs=30.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |||.|+| .|.+|+.+++.|.++|++|++++|++
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCc
Confidence            4799998 69999999999999999999999987

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=0.00045  Score=46.51  Aligned_cols=68  Identities=13%  Similarity=0.116  Sum_probs=53.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      ...+|.|.| +|.+|+-++....+.|++|++++.++.       .....+        .-.++.+|..|.+.+.++..  
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~-------~PA~~v--------a~~~i~~~~~d~~~l~~~~~~~   73 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYAD-------APAMHV--------AHRSHVINMLDGDALRRVVELE   73 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTT-------CGGGGG--------SSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCC-------Cchhhc--------CCeEEECCCCCHHHHHHHHHhh
Confidence            346899999 899999999999999999999998871       111111        23678899999999999885  


Q ss_pred             CCCEEE
Q 025660           82 GCTGVL   87 (249)
Q Consensus        82 ~~d~vi   87 (249)
                      .+|+|.
T Consensus        74 ~~DviT   79 (111)
T d1kjqa2          74 KPHYIV   79 (111)
T ss_dssp             CCSEEE
T ss_pred             CCceEE
Confidence            578875

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.54  E-value=0.00012  Score=55.09  Aligned_cols=78  Identities=15%  Similarity=0.162  Sum_probs=52.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC--CCCeE------EEEcCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLR------IFHADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~~~~~------~~~~Dl~~~~~~~   77 (249)
                      |+|.|.| .|++|..++..|.++|++|++++.+.        ++.+.+.+-...  .....      .....+.-..++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~--------~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~   71 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSS--------TKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFK   71 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCH--------HHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHH
Confidence            4799997 99999999999999999999999987        666655432110  00000      0001112224566


Q ss_pred             HHHcCCCEEEEcccc
Q 025660           78 AAIAGCTGVLHVATP   92 (249)
Q Consensus        78 ~~~~~~d~vih~a~~   92 (249)
                      ++++++|+++.|...
T Consensus        72 ~~i~~~d~i~i~VpT   86 (202)
T d1mv8a2          72 KAVLDSDVSFICVGT   86 (202)
T ss_dssp             HHHHTCSEEEECCCC
T ss_pred             HHHhhCCEEEEecCc
Confidence            677789999988875

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.54  E-value=0.00044  Score=50.06  Aligned_cols=76  Identities=20%  Similarity=0.095  Sum_probs=52.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCC--CChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL--SHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~   81 (249)
                      .+.+|+|+| +|.+|...++.+...|.+|+++++++        ++.+..+++..   . ..+..|-  .+.+.+.+.+.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~--------~r~~~a~~~ga---~-~~~~~~~~~~~~~~~~~~~~   92 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSP--------RRLEVAKNCGA---D-VTLVVDPAKEEESSIIERIR   92 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTTC---S-EEEECCTTTSCHHHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHH--------HHHHHHHHcCC---c-EEEeccccccccchhhhhhh
Confidence            356899997 68899999998888899999999988        67666655522   1 2333333  23333433332


Q ss_pred             -----CCCEEEEcccc
Q 025660           82 -----GCTGVLHVATP   92 (249)
Q Consensus        82 -----~~d~vih~a~~   92 (249)
                           .+|+||.+.|.
T Consensus        93 ~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          93 SAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             HHSSSCCSEEEECSCC
T ss_pred             cccccCCceeeecCCC
Confidence                 48999999884

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.51  E-value=3.9e-05  Score=54.96  Aligned_cols=113  Identities=11%  Similarity=0.023  Sum_probs=71.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhh----hccCCC-CCCCeEEEEcCCCChhhHHH
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSF----LKNLPG-ASERLRIFHADLSHPDGFDA   78 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~-~~~~~~~~~~Dl~~~~~~~~   78 (249)
                      +.||-|+|+ |.+|+.++..|..++ .++.++++++        ++.+.    +..... ...+..+...+  +.    +
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~--------~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~   67 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVK--------NMPHGKALDTSHTNVMAYSNCKVSGSN--TY----D   67 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS--------SHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----G
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccC--------CcceeeecchhhhccccCCCcEEEecc--cc----c
Confidence            468999995 999999998777776 4899999876        22221    111100 11122222221  22    2


Q ss_pred             HHcCCCEEEEccccCCC-CCC---ChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           79 AIAGCTGVLHVATPVDF-EDK---EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        79 ~~~~~d~vih~a~~~~~-~~~---~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      .++++|+||-+||.... .+.   ......+..|..-.+.+.+.+.+.. ...++.+-|
T Consensus        68 ~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~-p~aivivvt  125 (150)
T d1t2da1          68 DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVT  125 (150)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred             ccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcC-CCeEEEEec
Confidence            35689999999996543 111   1123778999999999999999988 455555544

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.50  E-value=0.00012  Score=52.03  Aligned_cols=35  Identities=20%  Similarity=0.238  Sum_probs=27.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC---eEEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRS   38 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~   38 (249)
                      +.++|.|.||||++|+.|++-|.+++|   ++..+..+
T Consensus         1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           1 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            356899999999999999999976654   66655443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.41  E-value=0.00011  Score=54.02  Aligned_cols=75  Identities=19%  Similarity=0.300  Sum_probs=49.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   82 (249)
                      +.+|||+||+|.+|...++-....|.+|+++++++        ++.+.+.++-.   . ..+.-+-.+.+ ..+...  +
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~--------~k~~~~~~lGa---~-~vi~~~~~~~~-~~~~~~~~g   98 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA--------AEHDYLRVLGA---K-EVLAREDVMAE-RIRPLDKQR   98 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT--------TCHHHHHHTTC---S-EEEECC----------CCSCC
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCch--------HHHHHHHhccc---c-eeeecchhHHH-HHHHhhccC
Confidence            46899999999999999998888899999999988        66666665522   1 22221111112 212222  5


Q ss_pred             CCEEEEcccc
Q 025660           83 CTGVLHVATP   92 (249)
Q Consensus        83 ~d~vih~a~~   92 (249)
                      +|+|+.+.|-
T Consensus        99 vD~vid~vgg  108 (176)
T d1xa0a2          99 WAAAVDPVGG  108 (176)
T ss_dssp             EEEEEECSTT
T ss_pred             cCEEEEcCCc
Confidence            8999999874

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.41  E-value=0.00012  Score=52.88  Aligned_cols=66  Identities=17%  Similarity=0.211  Sum_probs=49.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      |++|.++| .|.+|+++++.|+++||+|.+++|+.        ++.+.+.....            ....+..++++.+|
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~--------~~~~~~~~~~~------------~~~~~~~e~~~~~d   59 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQ--------SAVDGLVAAGA------------SAARSARDAVQGAD   59 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSH--------HHHHHHHHTTC------------EECSSHHHHHTSCS
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECch--------hhhhhhhhhhc------------cccchhhhhccccC
Confidence            35799998 89999999999999999999999987        56555543321            11134566778888


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      +++-+..
T Consensus        60 iii~~v~   66 (162)
T d3cuma2          60 VVISMLP   66 (162)
T ss_dssp             EEEECCS
T ss_pred             eeeeccc
Confidence            8886654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.33  E-value=0.00013  Score=52.66  Aligned_cols=65  Identities=17%  Similarity=0.249  Sum_probs=48.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+|.|+| .|.+|+.+++.|+++|++|++.+|++        ++.+.+.+..     ...       .++..++++++|+
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~--------~~~~~~~~~~-----~~~-------~~~~~e~~~~~d~   59 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNP--------EAIADVIAAG-----AET-------ASTAKAIAEQCDV   59 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHTT-----CEE-------CSSHHHHHHHCSE
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCc--------chhHHHHHhh-----hhh-------cccHHHHHhCCCe
Confidence            4799998 89999999999999999999999987        6666554431     111       1345667778898


Q ss_pred             EEEccc
Q 025660           86 VLHVAT   91 (249)
Q Consensus        86 vih~a~   91 (249)
                      |+-|-.
T Consensus        60 ii~~v~   65 (161)
T d1vpda2          60 IITMLP   65 (161)
T ss_dssp             EEECCS
T ss_pred             EEEEcC
Confidence            886653

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.31  E-value=0.0034  Score=42.04  Aligned_cols=95  Identities=11%  Similarity=0.102  Sum_probs=62.5

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .++++|||+| +|-+|.+-++.|++.|.+|++++....       +....+...    .++.++..+..+.+     +++
T Consensus        10 l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~-------~~~~~~~~~----~~i~~~~~~~~~~d-----l~~   72 (113)
T d1pjqa1          10 LRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFI-------PQFTVWANE----GMLTLVEGPFDETL-----LDS   72 (113)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCC-------HHHHHHHTT----TSCEEEESSCCGGG-----GTT
T ss_pred             eCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCC-------hHHHHHHhc----CCceeeccCCCHHH-----hCC
Confidence            3678999999 678999999999999999999887651       233333222    25677776666544     567


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ++.|+.+.+       +..     .    ...+.+.|++.+   .+|++..
T Consensus        73 ~~lv~~at~-------d~~-----~----n~~i~~~a~~~~---ilVNv~D  104 (113)
T d1pjqa1          73 CWLAIAATD-------DDT-----V----NQRVSDAAESRR---IFCNVVD  104 (113)
T ss_dssp             CSEEEECCS-------CHH-----H----HHHHHHHHHHTT---CEEEETT
T ss_pred             CcEEeecCC-------CHH-----H----HHHHHHHHHHcC---CEEEeCC
Confidence            788774432       111     1    235666677654   5677654

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.28  E-value=0.00014  Score=52.83  Aligned_cols=75  Identities=13%  Similarity=0.010  Sum_probs=51.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCC-ChhhHHHHHcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-HPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~   82 (249)
                      .+.+|+|+|+ |.+|...++.+...|.+|+++++++        ++.+...++-.   . +++  |.. +.+..+...+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~--------~k~~~a~~lGa---~-~~i--~~~~~~~~~~~~~~~   91 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS--------RKREDAMKMGA---D-HYI--ATLEEGDWGEKYFDT   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS--------TTHHHHHHHTC---S-EEE--EGGGTSCHHHHSCSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccch--------hHHHHhhccCC---c-EEe--eccchHHHHHhhhcc
Confidence            3578999986 8899998887777899999999988        56665555421   1 222  222 23444444557


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      +|.++.+.+..
T Consensus        92 ~d~vi~~~~~~  102 (168)
T d1piwa2          92 FDLIVVCASSL  102 (168)
T ss_dssp             EEEEEECCSCS
T ss_pred             cceEEEEecCC
Confidence            89999987753

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.27  E-value=0.0023  Score=46.49  Aligned_cols=74  Identities=11%  Similarity=0.206  Sum_probs=54.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +.+|-++| .|.+|+.+++.|++.||+|++++|++        ++.+.+.+.........    -....+++.+.+..+|
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~--------~~~~~l~~~~~~~~~~~----~a~~~~~~~~~~~~~~   68 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTV--------SKVDDFLANEAKGTKVL----GAHSLEEMVSKLKKPR   68 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSST--------HHHHHHHHTTTTTSSCE----ECSSHHHHHHHBCSSC
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCH--------HHHHHHHHhcccccccc----chhhhhhhhhhhcccc
Confidence            45899998 79999999999999999999999998        77766644322111111    1345677778888888


Q ss_pred             EEEEccc
Q 025660           85 GVLHVAT   91 (249)
Q Consensus        85 ~vih~a~   91 (249)
                      .++-+..
T Consensus        69 ~ii~~~~   75 (176)
T d2pgda2          69 RIILLVK   75 (176)
T ss_dssp             EEEECSC
T ss_pred             eEEEecC
Confidence            8886654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.0021  Score=46.42  Aligned_cols=76  Identities=17%  Similarity=0.120  Sum_probs=53.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+.+|+|.|+ |.+|...+..+...|. +|+++++++        ++.+..+++..    -+.+..+-.+.....+.+. 
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~--------~rl~~a~~~Ga----~~~~~~~~~~~~~~~~~~~~   92 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA--------TRLSKAKEIGA----DLVLQISKESPQEIARKVEG   92 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHHHTTC----SEEEECSSCCHHHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCH--------HHHHHHHHhCC----cccccccccccccccccccc
Confidence            3568999986 9999999999988998 799999987        66666555522    2344444455544444432 


Q ss_pred             ----CCCEEEEcccc
Q 025660           82 ----GCTGVLHVATP   92 (249)
Q Consensus        82 ----~~d~vih~a~~   92 (249)
                          ++|+||.+.|.
T Consensus        93 ~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          93 QLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHTSCCSEEEECSCC
T ss_pred             cCCCCceEEEeccCC
Confidence                58999999884

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.25  E-value=0.00014  Score=52.01  Aligned_cols=65  Identities=15%  Similarity=0.054  Sum_probs=47.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |+|.++| +|-+|+++++.|++.|+++++.+|+.        ++.+.+.+...           +.-..+..++++++|+
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~--------~~~~~l~~~~g-----------~~~~~~~~~~~~~~dv   60 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSL--------ERSKEIAEQLA-----------LPYAMSHQDLIDQVDL   60 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSH--------HHHHHHHHHHT-----------CCBCSSHHHHHHTCSE
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChH--------HhHHhhccccc-----------eeeechhhhhhhccce
Confidence            4799997 89999999999999999999999987        55555432211           1111346677889999


Q ss_pred             EEEcc
Q 025660           86 VLHVA   90 (249)
Q Consensus        86 vih~a   90 (249)
                      |+-+.
T Consensus        61 Iilav   65 (152)
T d2ahra2          61 VILGI   65 (152)
T ss_dssp             EEECS
T ss_pred             eeeec
Confidence            98664

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.23  E-value=3.9e-05  Score=56.04  Aligned_cols=44  Identities=34%  Similarity=0.527  Sum_probs=37.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL   56 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~   56 (249)
                      +.+|||+||+|.+|.+.++-....|.+|+++++++        ++.+.+.++
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~--------~k~~~~~~l   67 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR--------EAADYLKQL   67 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS--------STHHHHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCH--------HHHHHHHhh
Confidence            34799999999999999987777799999999988        666666655

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.22  E-value=0.00025  Score=49.10  Aligned_cols=68  Identities=16%  Similarity=0.147  Sum_probs=52.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH-HcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d   84 (249)
                      |.++|.| .|-+|+.+++.|  ++++|.+++.++        +..+.+...     ++.++.||.++++.+.++ +++++
T Consensus         1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~--------~~~~~~~~~-----~~~~i~Gd~~~~~~L~~a~i~~A~   64 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDE--------NVRKKVLRS-----GANFVHGDPTRVSDLEKANVRGAR   64 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCT--------THHHHHHHT-----TCEEEESCTTSHHHHHHTTCTTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcch--------HHHHHHHhc-----CccccccccCCHHHHHHhhhhcCc
Confidence            4689998 577899999998  577888888887        555544432     578999999999988876 45788


Q ss_pred             EEEEc
Q 025660           85 GVLHV   89 (249)
Q Consensus        85 ~vih~   89 (249)
                      .+|-+
T Consensus        65 ~vi~~   69 (129)
T d2fy8a1          65 AVIVN   69 (129)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            88743

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00019  Score=52.26  Aligned_cols=73  Identities=15%  Similarity=0.156  Sum_probs=49.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++|||.|| |+.+++++..|.+.|.+|+++.|+.        ++.+.+.+.......+..  .+..+.+     ..++
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~--------~ka~~l~~~~~~~~~~~~--~~~~~~~-----~~~~   80 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV--------SRAEELAKLFAHTGSIQA--LSMDELE-----GHEF   80 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH--------HHHHHHHHHTGGGSSEEE--CCSGGGT-----TCCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccceEEEeccchH--------HHHHHHHHHHhhcccccc--ccccccc-----cccc
Confidence            4689999995 7799999999999999999999987        555555332221112222  2222222     2468


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|||+-..
T Consensus        81 dliIN~Tp~   89 (170)
T d1nyta1          81 DLIINATSS   89 (170)
T ss_dssp             SEEEECCSC
T ss_pred             ceeeccccc
Confidence            999998644

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.20  E-value=4.9e-05  Score=56.62  Aligned_cols=77  Identities=16%  Similarity=0.189  Sum_probs=51.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCC---CCCCCeEEEEcCCCChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP---GASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      .|++|.|.| +|--|++++..|.+.||+|++++|++        +..+.+.+..   ...+.+. +.-++.-..++.+++
T Consensus         6 ~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~--------~~~~~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~   75 (189)
T d1n1ea2           6 YLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNE--------EEVRLVNEKRENVLFLKGVQ-LASNITFTSDVEKAY   75 (189)
T ss_dssp             CEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCH--------HHHHHHHHHTBCTTTSTTCB-CCTTEEEESCHHHHH
T ss_pred             eeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecH--------HHHHHHhhcccccccccccc-cccccccchhhhhcc
Confidence            446899999 78899999999999999999999987        5554442211   1011111 111222234678889


Q ss_pred             cCCCEEEEcc
Q 025660           81 AGCTGVLHVA   90 (249)
Q Consensus        81 ~~~d~vih~a   90 (249)
                      +++|+|+.+.
T Consensus        76 ~~ad~iiiav   85 (189)
T d1n1ea2          76 NGAEIILFVI   85 (189)
T ss_dssp             TTCSCEEECS
T ss_pred             CCCCEEEEcC
Confidence            9999988644

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.00042  Score=50.19  Aligned_cols=74  Identities=19%  Similarity=0.079  Sum_probs=54.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+.+|+|.|+ |.+|...++-+...|.+++++++++        ++.+...++-.    .  ...|..+++......+.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~--------~~~~~a~~lGa----d--~~i~~~~~~~~~~~~~~~   94 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSE--------AKREAAKALGA----D--EVVNSRNADEMAAHLKSF   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHTC----S--EEEETTCHHHHHTTTTCE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccch--------hHHHHHhccCC----c--EEEECchhhHHHHhcCCC
Confidence            3578999986 8899999988888899999998887        55554444422    1  224666766666666689


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |.++.+.+.
T Consensus        95 D~vid~~g~  103 (168)
T d1uufa2          95 DFILNTVAA  103 (168)
T ss_dssp             EEEEECCSS
T ss_pred             ceeeeeeec
Confidence            999999874

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.17  E-value=0.00087  Score=49.11  Aligned_cols=78  Identities=17%  Similarity=0.147  Sum_probs=50.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCC-CCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA-SERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      |+|.|.| +|-.|.+++..|.++|++|+++.|+..      .+..+.+...... .-.......++.-.+++.++++++|
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~------~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad   73 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD------TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAE   73 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG------HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc------HHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccc
Confidence            4799999 688999999999999999999998641      1223333221110 0001111112334567888999999


Q ss_pred             EEEEcc
Q 025660           85 GVLHVA   90 (249)
Q Consensus        85 ~vih~a   90 (249)
                      +|+.+-
T Consensus        74 ~Ii~av   79 (180)
T d1txga2          74 VVLLGV   79 (180)
T ss_dssp             EEEECS
T ss_pred             hhhccc
Confidence            998644

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.07  E-value=0.00073  Score=49.50  Aligned_cols=76  Identities=12%  Similarity=0.123  Sum_probs=50.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh-hh---HHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DG---FDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~-~~---~~~   78 (249)
                      .+.+|||+|| |.+|...++-+...|. +|+++++++        ++.+..+++..    -.++.-.-.+. +.   +.+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~--------~~~~~a~~lGa----~~vi~~~~~~~~~~~~~i~~   94 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP--------NRLKLAEEIGA----DLTLNRRETSVEERRKAIMD   94 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCH--------HHHHHHHHTTC----SEEEETTTSCHHHHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccc--------ccccccccccc----eEEEeccccchHHHHHHHHH
Confidence            3578999996 8899999999988997 799999988        66666665522    12332222222 22   222


Q ss_pred             HHc--CCCEEEEcccc
Q 025660           79 AIA--GCTGVLHVATP   92 (249)
Q Consensus        79 ~~~--~~d~vih~a~~   92 (249)
                      ...  ++|+||.+.|.
T Consensus        95 ~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          95 ITHGRGADFILEATGD  110 (182)
T ss_dssp             HTTTSCEEEEEECSSC
T ss_pred             hhCCCCceEEeecCCc
Confidence            222  48999999875

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.04  E-value=0.00094  Score=43.27  Aligned_cols=71  Identities=13%  Similarity=0.079  Sum_probs=48.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++|+|+|.|. |-.|.++++.|.++|++|++.+.+..+      +..+.+..      ...++.+...     ...++++
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~------~~~~~~~~------~~~~~~~~~~-----~~~~~~~   65 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTP------PGLDKLPE------AVERHTGSLN-----DEWLMAA   65 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSC------TTGGGSCT------TSCEEESBCC-----HHHHHHC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCc------hhHHHHhh------ccceeecccc-----hhhhccC
Confidence            5688999996 668999999999999999999987620      11111111      2334444432     2345688


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |.||-.-|.
T Consensus        66 d~vi~SPGi   74 (93)
T d2jfga1          66 DLIVASPGI   74 (93)
T ss_dssp             SEEEECTTS
T ss_pred             CEEEECCCC
Confidence            999988886

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.04  E-value=0.0017  Score=45.79  Aligned_cols=32  Identities=22%  Similarity=0.345  Sum_probs=25.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC-C---eEEEEEc
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG-Y---SVTTTVR   37 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~---~V~~~~r   37 (249)
                      |||.|.||||++|+.|++.|+++. |   ++..++.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss   36 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST   36 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecc
Confidence            479999999999999999998754 3   5554443

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.02  E-value=0.0041  Score=45.31  Aligned_cols=32  Identities=16%  Similarity=0.271  Sum_probs=26.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-CeEEEEE
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTV   36 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~   36 (249)
                      |++|.|.||||++|..|++-|.++. .++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            4589999999999999999999874 5775554

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.00  E-value=0.00025  Score=51.94  Aligned_cols=34  Identities=24%  Similarity=0.245  Sum_probs=27.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRS   38 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (249)
                      |++|.|.||||++|..|++-|.+.. .++..+.-+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            4589999999999999999998865 477666433

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.00  E-value=0.00066  Score=49.12  Aligned_cols=34  Identities=18%  Similarity=0.288  Sum_probs=29.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~   39 (249)
                      ||+|+|+| .|.+|..+++.|.+.|+  +|++++|+.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP   36 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence            45799998 79999999999999996  788888876

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.97  E-value=0.00071  Score=48.94  Aligned_cols=75  Identities=12%  Similarity=0.101  Sum_probs=51.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+.+|+|+|++|.+|...+..+...| .+|+++++++        ++.+.++++..    -+.+  |.++.+..++..+ 
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~--------~~~~~~~~~Ga----~~~i--~~~~~~~~~~~~~~   92 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE--------EAVEAAKRAGA----DYVI--NASMQDPLAEIRRI   92 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH--------HHHHHHHHHTC----SEEE--ETTTSCHHHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccch--------hhHHHHHHcCC----ceee--ccCCcCHHHHHHHH
Confidence            34689999999999999999888888 5888888887        66666655422    1233  3333333333332 


Q ss_pred             ----CCCEEEEcccc
Q 025660           82 ----GCTGVLHVATP   92 (249)
Q Consensus        82 ----~~d~vih~a~~   92 (249)
                          .+|+++.+.+.
T Consensus        93 ~~~~~~d~vid~~g~  107 (170)
T d1jvba2          93 TESKGVDAVIDLNNS  107 (170)
T ss_dssp             TTTSCEEEEEESCCC
T ss_pred             hhcccchhhhccccc
Confidence                48999999874

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.97  E-value=0.00053  Score=52.47  Aligned_cols=38  Identities=34%  Similarity=0.427  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+...++|+|+| +|..|...+..|.++|++|+++.|+.
T Consensus         2 ~~~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           2 MMHSQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            555677899998 79999999999999999999999875

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.97  E-value=0.00042  Score=50.47  Aligned_cols=73  Identities=12%  Similarity=0.103  Sum_probs=50.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      ++++|+|.| +|+.+++++..|.+.+.+|+++.|+.        ++.+.+.+.......+.....|-.+       ..++
T Consensus        17 ~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~--------~~a~~l~~~~~~~~~~~~~~~~~~~-------~~~~   80 (171)
T d1p77a1          17 PNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTF--------SKTKELAERFQPYGNIQAVSMDSIP-------LQTY   80 (171)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSH--------HHHHHHHHHHGGGSCEEEEEGGGCC-------CSCC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchH--------HHHHHHHHHHhhccccchhhhcccc-------cccc
Confidence            457899998 56689999999998888999999987        5555553322222234444443221       3578


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|||+...
T Consensus        81 diiIN~tp~   89 (171)
T d1p77a1          81 DLVINATSA   89 (171)
T ss_dssp             SEEEECCCC
T ss_pred             ceeeecccc
Confidence            999999654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.83  E-value=0.0015  Score=47.91  Aligned_cols=62  Identities=16%  Similarity=0.146  Sum_probs=47.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|.|.| .|-||+.+++.|..-|.+|++.+|...                 +         .+..-.++++++++.+
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~-----------------~---------~~~~~~~~l~ell~~s   93 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPK-----------------E---------GPWRFTNSLEEALREA   93 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCC-----------------C---------SSSCCBSCSHHHHTTC
T ss_pred             cCceEEEec-cccccccceeeeecccccccccccccc-----------------c---------cceeeeechhhhhhcc
Confidence            468999998 778999999999999999999998761                 0         1111123577899999


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|+.+.-.
T Consensus        94 Div~~~~pl  102 (181)
T d1qp8a1          94 RAAVCALPL  102 (181)
T ss_dssp             SEEEECCCC
T ss_pred             chhhccccc
Confidence            998876654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.76  E-value=0.00077  Score=49.19  Aligned_cols=40  Identities=20%  Similarity=0.293  Sum_probs=34.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK   54 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~   54 (249)
                      |+|-|+| .|..|+.++++|++.||+|.+++|+.        ++.+.+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~--------~~~~~l~   41 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTY--------SKSEEFM   41 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSH--------HHHHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCH--------HHHHHHH
Confidence            4799998 99999999999999999999999987        6665553

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.73  E-value=0.00064  Score=48.34  Aligned_cols=65  Identities=22%  Similarity=0.260  Sum_probs=44.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCCE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   85 (249)
                      |||.|+| .|.+|+++++.|.++|++|++.+++.        .+...+.....   .+         .++..++++.+|+
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~--------~~~~~~~~~~~---~~---------~~~~~e~~~~~di   59 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGR--------SPSTIERARTV---GV---------TETSEEDVYSCPV   59 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTC--------CHHHHHHHHHH---TC---------EECCHHHHHTSSE
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCch--------hHHHHHhhhcc---cc---------cccHHHHHhhcCe
Confidence            4799997 79999999999999999999988776        22222211100   11         1224567889999


Q ss_pred             EEEccc
Q 025660           86 VLHVAT   91 (249)
Q Consensus        86 vih~a~   91 (249)
                      |+-+-.
T Consensus        60 Ii~~v~   65 (152)
T d1i36a2          60 VISAVT   65 (152)
T ss_dssp             EEECSC
T ss_pred             EEEEec
Confidence            997654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00096  Score=49.46  Aligned_cols=35  Identities=23%  Similarity=0.274  Sum_probs=32.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +.++|.|.|| |.+|+.++..++..|++|+++++++
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTE   37 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCh
Confidence            4579999995 9999999999999999999999987

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.60  E-value=0.00085  Score=49.35  Aligned_cols=33  Identities=18%  Similarity=0.371  Sum_probs=27.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEE
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTV   36 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~   36 (249)
                      ++.||.|.||||+.|..|++-|.+..+ ++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            456899999999999999999988754 766554

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.56  E-value=0.0043  Score=44.35  Aligned_cols=73  Identities=18%  Similarity=0.220  Sum_probs=48.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh---hhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~---~~~~~~~   80 (249)
                      .+.+|+|.|+ |.+|...++-+...|.+|+++++++        ++.+..+++-.    .+++  |.++.   +.+.+..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~--------~~~~~a~~~Ga----~~~i--~~~~~~~~~~~~~~~   91 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDD--------AKLELARKLGA----SLTV--NARQEDPVEAIQRDI   91 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTTC----SEEE--ETTTSCHHHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchh--------hHHHhhhccCc----cccc--cccchhHHHHHHHhh
Confidence            3568999986 8899999988888899999999987        66666655522    1233  33333   3344444


Q ss_pred             cCCCEEEEccc
Q 025660           81 AGCTGVLHVAT   91 (249)
Q Consensus        81 ~~~d~vih~a~   91 (249)
                      .+.+.+|-+.+
T Consensus        92 ~g~~~~i~~~~  102 (166)
T d1llua2          92 GGAHGVLVTAV  102 (166)
T ss_dssp             SSEEEEEECCS
T ss_pred             cCCcccccccc
Confidence            45566665544

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.54  E-value=0.00087  Score=49.03  Aligned_cols=43  Identities=33%  Similarity=0.494  Sum_probs=36.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL   56 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~   56 (249)
                      .+|||+||+|.+|...++-.-..|.+|+++++++        ++.+.+.++
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~--------~k~~~~~~l   75 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE--------STHEYLKSL   75 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG--------GGHHHHHHH
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecch--------hHHHHHHhh
Confidence            4899999999999999998888899999999988        666666554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.52  E-value=0.001  Score=47.90  Aligned_cols=77  Identities=19%  Similarity=0.229  Sum_probs=59.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      .-+|+|.| .|-.|..-++....-|.+|++++++.        ++.+.++.....  .+   ..-..+.+.+++.++++|
T Consensus        32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~--------~~l~~l~~~~~~--~~---~~~~~~~~~l~~~~~~aD   97 (168)
T d1pjca1          32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINV--------ERLSYLETLFGS--RV---ELLYSNSAEIETAVAEAD   97 (168)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHGG--GS---EEEECCHHHHHHHHHTCS
T ss_pred             CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcH--------HHHHHHHHhhcc--cc---eeehhhhhhHHHhhccCc
Confidence            46899998 78999999999999999999999998        666666544321  22   223566788899999999


Q ss_pred             EEEEccccCCC
Q 025660           85 GVLHVATPVDF   95 (249)
Q Consensus        85 ~vih~a~~~~~   95 (249)
                      +||.++-....
T Consensus        98 ivI~aalipG~  108 (168)
T d1pjca1          98 LLIGAVLVPGR  108 (168)
T ss_dssp             EEEECCCCTTS
T ss_pred             EEEEeeecCCc
Confidence            99988876443

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.52  E-value=0.0025  Score=42.93  Aligned_cols=35  Identities=23%  Similarity=0.196  Sum_probs=32.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++++|.| +|++|..++..|.+.|.+|+++.|.+
T Consensus        21 ~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEEC-CCccceeeeeeecccccEEEEEEecc
Confidence            457899998 79999999999999999999999887

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.44  E-value=0.0026  Score=43.33  Aligned_cols=36  Identities=22%  Similarity=0.123  Sum_probs=32.6

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ...++++|.| +|+||..++..|.+.|.+|+++.|++
T Consensus        21 ~~p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          21 EIPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCCeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            3457999998 79999999999999999999999877

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.44  E-value=0.0021  Score=46.66  Aligned_cols=74  Identities=15%  Similarity=0.017  Sum_probs=50.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh---hhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~---~~~~~~   79 (249)
                      .+.+|+|.|+ |.+|...++.+...|. +|+++++++        ++.+..+++-.    .++  .|.++.   +.+.++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~--------~r~~~a~~lGa----~~~--i~~~~~~~~~~v~~~   91 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRP--------ICVEAAKFYGA----TDI--LNYKNGHIEDQVMKL   91 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCH--------HHHHHHHHHTC----SEE--ECGGGSCHHHHHHHH
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccchh--------hhHHHHHhhCc----ccc--ccccchhHHHHHHHH
Confidence            3568999985 8999998888888896 799998887        56665554421    122  233332   344444


Q ss_pred             Hc--CCCEEEEcccc
Q 025660           80 IA--GCTGVLHVATP   92 (249)
Q Consensus        80 ~~--~~d~vih~a~~   92 (249)
                      ..  ++|+||.+.|.
T Consensus        92 t~g~G~D~vid~~g~  106 (174)
T d1jqba2          92 TNGKGVDRVIMAGGG  106 (174)
T ss_dssp             TTTSCEEEEEECSSC
T ss_pred             hhccCcceEEEccCC
Confidence            43  48999999985

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.43  E-value=0.0083  Score=38.87  Aligned_cols=73  Identities=16%  Similarity=0.161  Sum_probs=51.6

Q ss_pred             CCCCCeEEEeccchhhH-HHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH
Q 025660            2 EEGKGRVCVTGGTGFIA-SWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (249)
Q Consensus         2 ~~~~~~vlItGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~   80 (249)
                      +.+.++|.+.|-+| +| ++|++.|.++|++|.+.|+...       ...+.+.+.     .+.+..++-.+      .+
T Consensus         5 ~~~~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~~-------~~~~~L~~~-----Gi~v~~g~~~~------~i   65 (96)
T d1p3da1           5 MRRVQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIADG-------VVTQRLAQA-----GAKIYIGHAEE------HI   65 (96)
T ss_dssp             CTTCCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCCS-------HHHHHHHHT-----TCEEEESCCGG------GG
T ss_pred             chhCCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCCC-------hhhhHHHHC-----CCeEEECCccc------cC
Confidence            44668999998555 66 7889999999999999998752       445555543     45555544322      23


Q ss_pred             cCCCEEEEccccC
Q 025660           81 AGCTGVLHVATPV   93 (249)
Q Consensus        81 ~~~d~vih~a~~~   93 (249)
                      ++.|.||...|+.
T Consensus        66 ~~~d~vV~S~AI~   78 (96)
T d1p3da1          66 EGASVVVVSSAIK   78 (96)
T ss_dssp             TTCSEEEECTTSC
T ss_pred             CCCCEEEECCCcC
Confidence            5789999888863

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.43  E-value=0.0021  Score=46.32  Aligned_cols=43  Identities=21%  Similarity=0.358  Sum_probs=35.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhcc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKN   55 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~   55 (249)
                      +.++|+|.|+ |+.+++++..|.+.|. +|.++.|+.        ++.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~--------~ka~~L~~   59 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNV--------KTGQYLAA   59 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCH--------HHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccH--------HHHHHHHH
Confidence            4578999995 7799999999999996 899999987        56555543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.33  E-value=0.0025  Score=46.82  Aligned_cols=72  Identities=15%  Similarity=0.055  Sum_probs=45.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEE-EEcCCCCcccCCchhhhhhc-cCCCCCCCeEEEEcCCCChh---hHHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTT-TVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPD---GFDAAI   80 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Dl~~~~---~~~~~~   80 (249)
                      .+|||+||+|.+|+..++-....|.++++ +++++        ++...+. +...    .  +..|.++++   .+.++.
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~--------e~~~~l~~~~ga----d--~vi~~~~~~~~~~~~~~~   97 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQ--------EKCLFLTSELGF----D--AAVNYKTGNVAEQLREAC   97 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSH--------HHHHHHHHHSCC----S--EEEETTSSCHHHHHHHHC
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchH--------HHHhhhhhcccc----e--EEeeccchhHHHHHHHHh
Confidence            57999999999999999887778976554 44444        3433332 3321    1  233444433   233332


Q ss_pred             c-CCCEEEEccc
Q 025660           81 A-GCTGVLHVAT   91 (249)
Q Consensus        81 ~-~~d~vih~a~   91 (249)
                      . ++|+|+.+.|
T Consensus        98 ~~GvDvv~D~vG  109 (187)
T d1vj1a2          98 PGGVDVYFDNVG  109 (187)
T ss_dssp             TTCEEEEEESSC
T ss_pred             ccCceEEEecCC
Confidence            2 4899998887

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.32  E-value=0.0033  Score=42.75  Aligned_cols=35  Identities=20%  Similarity=0.218  Sum_probs=32.1

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSEL   40 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (249)
                      .++++|.| +|++|..++..|.++|.+|+++.+++.
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            57899998 899999999999999999999999873

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.31  E-value=0.0054  Score=44.31  Aligned_cols=77  Identities=13%  Similarity=0.058  Sum_probs=49.4

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC-hhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-PDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~   81 (249)
                      .+.+|+|.|+ |.+|...+..+...| .+|+++++++        ++.+...+...   ...+...+..+ .+...+...
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~--------~k~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~   95 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK--------DKFAKAKEVGA---TECVNPQDYKKPIQEVLTEMS   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG--------GGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHT
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcH--------HHHHHHHHhCC---eeEEecCCchhHHHHHHHHHh
Confidence            3468999998 558988898888887 5888888887        66666555522   11122223222 222333332


Q ss_pred             --CCCEEEEcccc
Q 025660           82 --GCTGVLHVATP   92 (249)
Q Consensus        82 --~~d~vih~a~~   92 (249)
                        ++|++|.+.|.
T Consensus        96 ~~G~D~vid~~G~  108 (176)
T d2jhfa2          96 NGGVDFSFEVIGR  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCCCEEEecCCc
Confidence              58999998885

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.30  E-value=0.0041  Score=42.07  Aligned_cols=36  Identities=25%  Similarity=0.196  Sum_probs=32.7

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ...++++|.| +|+||-.++..|.+.|.+|+++.|+.
T Consensus        20 ~~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            3457899998 89999999999999999999999886

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.23  E-value=0.004  Score=41.87  Aligned_cols=35  Identities=23%  Similarity=0.129  Sum_probs=31.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      -.++++|.| +|++|..++..|.+.|++|+++.|.+
T Consensus        20 ~p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            357899998 89999999999999999999999986

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.18  E-value=0.0028  Score=45.07  Aligned_cols=25  Identities=28%  Similarity=0.339  Sum_probs=21.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY   30 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~   30 (249)
                      -+|.|.||||++|..|++-|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            3799999999999999998877754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.17  E-value=0.0046  Score=42.05  Aligned_cols=35  Identities=23%  Similarity=0.228  Sum_probs=31.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++|+|.| +|++|..++..|.+.|.+|+++.+.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            357899998 79999999999999999999998876

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.14  E-value=0.0046  Score=42.02  Aligned_cols=35  Identities=31%  Similarity=0.307  Sum_probs=31.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++++|+| +|+||..++..|.+.|.+|+++.|+.
T Consensus        19 ~P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          19 CPGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEech
Confidence            457899998 79999999999999999999998754

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.12  E-value=0.0057  Score=45.26  Aligned_cols=65  Identities=17%  Similarity=0.011  Sum_probs=47.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|.|.| .|.||+.+++.|..-|.+|++.++..        ......               +....+++.++++.+
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~--------~~~~~~---------------~~~~~~~l~~~l~~s   97 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFR--------NPELEK---------------KGYYVDSLDDLYKQA   97 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC--------CHHHHH---------------TTCBCSCHHHHHHHC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCccc--------cccccc---------------ceeeecccccccccc
Confidence            358999998 89999999999999999999998765        111100               111234677888889


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |+|+.+.-.
T Consensus        98 Dii~~~~pl  106 (197)
T d1j4aa1          98 DVISLHVPD  106 (197)
T ss_dssp             SEEEECSCC
T ss_pred             ccccccCCc
Confidence            988776654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.09  E-value=0.0058  Score=44.12  Aligned_cols=74  Identities=15%  Similarity=0.132  Sum_probs=47.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeE-EEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHH---HH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSV-TTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD---AA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~---~~   79 (249)
                      .+.+|+|.|+ |.+|...++.+...|.++ ++.++++        .+.+..+++..    .+++  |..+++..+   ++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~--------~k~~~a~~~Ga----~~~i--~~~~~~~~~~i~~~   92 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVE--------SRLELAKQLGA----THVI--NSKTQDPVAAIKEI   92 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCH--------HHHHHHHHHTC----SEEE--ETTTSCHHHHHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHH--------HHHHHHHHcCC----eEEE--eCCCcCHHHHHHHH
Confidence            3468999996 899999998887888765 4556665        56665555421    2333  444433333   33


Q ss_pred             Hc-CCCEEEEcccc
Q 025660           80 IA-GCTGVLHVATP   92 (249)
Q Consensus        80 ~~-~~d~vih~a~~   92 (249)
                      .. ++|+||.+.|.
T Consensus        93 t~gg~D~vid~~G~  106 (174)
T d1f8fa2          93 TDGGVNFALESTGS  106 (174)
T ss_dssp             TTSCEEEEEECSCC
T ss_pred             cCCCCcEEEEcCCc
Confidence            22 48999999884

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.08  E-value=0.002  Score=45.60  Aligned_cols=41  Identities=22%  Similarity=0.284  Sum_probs=34.3

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhcc
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKN   55 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~   55 (249)
                      |+|.++| +|-+|+++++.|++.| ++|.+.+|++        ++.+.+.+
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~--------~~~~~l~~   42 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGA--------EKRERLEK   42 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSH--------HHHHHHHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCCh--------hHHHHhhh
Confidence            4799998 6999999999999887 8999999987        66665543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.06  E-value=0.009  Score=43.18  Aligned_cols=76  Identities=13%  Similarity=0.065  Sum_probs=48.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC--hhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH--PDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~--~~~~~~~~   80 (249)
                      .+.+|+|+| +|.||...+..+...|. .|++.++++        ++.+..+++-.    ...+...-.+  .+...+..
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~--------~r~~~a~~~Ga----~~~i~~~~~~~~~~~~~~~~   94 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDING--------EKFPKAKALGA----TDCLNPRELDKPVQDVITEL   94 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCG--------GGHHHHHHTTC----SEEECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccch--------HHHHHHHHhCC----CcccCCccchhhhhhhHhhh
Confidence            346899998 59999999999999997 677778777        55555555422    1222221111  12222222


Q ss_pred             --cCCCEEEEcccc
Q 025660           81 --AGCTGVLHVATP   92 (249)
Q Consensus        81 --~~~d~vih~a~~   92 (249)
                        .++|+||.+.|.
T Consensus        95 ~~~G~d~vie~~G~  108 (174)
T d1e3ia2          95 TAGGVDYSLDCAGT  108 (174)
T ss_dssp             HTSCBSEEEESSCC
T ss_pred             hcCCCcEEEEeccc
Confidence              258999999985

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.05  E-value=0.0074  Score=43.03  Aligned_cols=73  Identities=14%  Similarity=0.150  Sum_probs=49.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC---hhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH---PDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~---~~~~~~~~   80 (249)
                      .+.+|||.|+ |.+|...++.+...|.+|+++++++        ++.+..+++..     ..+ .|-.+   .+.+.+..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~--------~r~~~~k~~Ga-----~~~-~~~~~~~~~~~~~~~~   91 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD--------EKLELAKELGA-----DLV-VNPLKEDAAKFMKEKV   91 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHTTC-----SEE-ECTTTSCHHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCH--------HHhhhhhhcCc-----cee-cccccchhhhhccccc
Confidence            3568999875 8899999888888899999999887        67666666522     122 22222   23455555


Q ss_pred             cCCCEEEEccc
Q 025660           81 AGCTGVLHVAT   91 (249)
Q Consensus        81 ~~~d~vih~a~   91 (249)
                      ++.+.+|.+++
T Consensus        92 ~~~~~~v~~~~  102 (168)
T d1rjwa2          92 GGVHAAVVTAV  102 (168)
T ss_dssp             SSEEEEEESSC
T ss_pred             CCCceEEeecC
Confidence            56677666654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.05  E-value=0.0054  Score=44.17  Aligned_cols=76  Identities=12%  Similarity=0.051  Sum_probs=46.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEc-CC-CChhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA-DL-SHPDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-Dl-~~~~~~~~~~   80 (249)
                      .+.+|+|.|+ |.+|...++.+...|. .|+++++++        ++.+..+++-.    .+.+.. +- .+.+...+..
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~--------~k~~~ak~lGa----~~~i~~~~~~~~~~~~~~~~   94 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINK--------DKFARAKEFGA----TECINPQDFSKPIQEVLIEM   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG--------GGHHHHHHHTC----SEEECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccH--------HHHHHHHHhCC----cEEEeCCchhhHHHHHHHHH
Confidence            3568999997 5689999988888886 566666666        55555555422    122221 11 1122222222


Q ss_pred             --cCCCEEEEcccc
Q 025660           81 --AGCTGVLHVATP   92 (249)
Q Consensus        81 --~~~d~vih~a~~   92 (249)
                        .++|+|+.+.|.
T Consensus        95 ~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 TDGGVDYSFECIGN  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEeeecCCC
Confidence              258999999884

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.00  E-value=0.022  Score=41.87  Aligned_cols=74  Identities=14%  Similarity=0.014  Sum_probs=49.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh---hhHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~---~~~~~~   79 (249)
                      .+.+|||.|+ |.+|...+..+...|. .|+++++++        ++.+...+.-     ... ..|-.+.   +.+.++
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~--------~rl~~a~~~G-----a~~-~~~~~~~~~~~~i~~~   89 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNP--------ARLAHAKAQG-----FEI-ADLSLDTPLHEQIAAL   89 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHHHTT-----CEE-EETTSSSCHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccc--------hhhHhhhhcc-----ccE-EEeCCCcCHHHHHHHH
Confidence            4578999985 8899888887777776 788888877        6666665552     222 2233332   344454


Q ss_pred             Hc--CCCEEEEcccc
Q 025660           80 IA--GCTGVLHVATP   92 (249)
Q Consensus        80 ~~--~~d~vih~a~~   92 (249)
                      ..  ++|++|.+.|.
T Consensus        90 t~g~g~D~vid~vG~  104 (195)
T d1kola2          90 LGEPEVDCAVDAVGF  104 (195)
T ss_dssp             HSSSCEEEEEECCCT
T ss_pred             hCCCCcEEEEECccc
Confidence            44  48999999884

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.00  E-value=0.0087  Score=40.98  Aligned_cols=30  Identities=10%  Similarity=0.130  Sum_probs=26.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTT   35 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~   35 (249)
                      |||.|.|++|-.|+.+.+.+.++++++.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            479999999999999999999999988654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.99  E-value=0.0052  Score=41.41  Aligned_cols=34  Identities=24%  Similarity=0.353  Sum_probs=31.6

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .++|+|.| +|++|-.++..|.+.|.+|+++.|.+
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            57899998 79999999999999999999999876

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.98  E-value=0.0099  Score=42.48  Aligned_cols=58  Identities=17%  Similarity=0.170  Sum_probs=46.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+|+|+|.|.+..+|+-|+.-|.++|+.|+......                                  ..+.+..++.
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t----------------------------------~~l~~~~~~A   81 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT----------------------------------KNLRHHVENA   81 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC----------------------------------SCHHHHHHHC
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhcccccccccc----------------------------------chhHHHHhhh
Confidence            578999999999999999999999999998765443                                  1245556789


Q ss_pred             CEEEEccccCCC
Q 025660           84 TGVLHVATPVDF   95 (249)
Q Consensus        84 d~vih~a~~~~~   95 (249)
                      |+||.++|....
T Consensus        82 DivI~a~G~p~~   93 (166)
T d1b0aa1          82 DLLIVAVGKPGF   93 (166)
T ss_dssp             SEEEECSCCTTC
T ss_pred             hHhhhhccCccc
Confidence            999999886554

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.97  E-value=0.034  Score=37.92  Aligned_cols=88  Identities=15%  Similarity=0.055  Sum_probs=56.4

Q ss_pred             CCCeEEEeccc---hhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHH
Q 025660            4 GKGRVCVTGGT---GFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         4 ~~~~vlItGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      +.++|.|+||+   +..|..+.+.|.+.| ++|+.+..+.        +...-           ....-++.|.      
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~--------~~i~G-----------~~~y~sl~dl------   61 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE--------EEVQG-----------VKAYKSVKDI------   61 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC--------SEETT-----------EECBSSTTSC------
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc--------cccCC-----------eEeecchhhc------
Confidence            45799999998   999999999987665 6888775443        11110           0112233332      


Q ss_pred             HcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEccc
Q 025660           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (249)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~  134 (249)
                      -..+|.++-+..                 -..+..+++.+.+.+ .+.++.+|+.
T Consensus        62 p~~vDlvvi~vp-----------------~~~~~~~~~~~~~~g-~~~~vi~s~G   98 (129)
T d2csua1          62 PDEIDLAIIVVP-----------------KRFVKDTLIQCGEKG-VKGVVIITAG   98 (129)
T ss_dssp             SSCCSEEEECSC-----------------HHHHHHHHHHHHHHT-CCEEEECCCS
T ss_pred             CCCCceEEEecC-----------------hHHhHHHHHHHHHcC-CCEEEEeccc
Confidence            246788774433                 223346678888888 8888888874

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.96  E-value=0.0091  Score=43.34  Aligned_cols=81  Identities=15%  Similarity=0.063  Sum_probs=55.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCe--------EE-------EEcC-
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL--------RI-------FHAD-   69 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~-------~~~D-   69 (249)
                      -+|+|.| .|-.|.+-++....-|.+|.++|.+.        ++.+.++++....-.+        +.       ...+ 
T Consensus        30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~--------~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~  100 (183)
T d1l7da1          30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRA--------ATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEF  100 (183)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCS--------TTHHHHHHTTCEECCC----------------------
T ss_pred             cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccH--------HHHHHHHHhhcceEEEeccccccccccccchhhcCHHH
Confidence            4899998 68899999999999999999999998        6666666553210000        00       0001 


Q ss_pred             -CCChhhHHHHHcCCCEEEEccccCCC
Q 025660           70 -LSHPDGFDAAIAGCTGVLHVATPVDF   95 (249)
Q Consensus        70 -l~~~~~~~~~~~~~d~vih~a~~~~~   95 (249)
                       ....+.+.+.+.++|+||-++-....
T Consensus       101 ~~~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         101 RKKQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             -CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHHHHHHhhhhheeeeecCCc
Confidence             12245677778899999988766443

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.96  E-value=0.0039  Score=45.74  Aligned_cols=35  Identities=14%  Similarity=0.214  Sum_probs=32.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +.++|.|.|| |.+|+.++..++..|++|+++++++
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINE   37 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            4578999995 9999999999999999999999986

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0064  Score=41.39  Aligned_cols=34  Identities=26%  Similarity=0.426  Sum_probs=31.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .++++|.| +|+||-.++..|.+.|.+|+++.|++
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            47899998 79999999999999999999999986

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.91  E-value=0.014  Score=37.23  Aligned_cols=69  Identities=19%  Similarity=0.232  Sum_probs=48.2

Q ss_pred             CeEEEeccchhhH-HHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            6 GRVCVTGGTGFIA-SWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         6 ~~vlItGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      |+|-++|-+| +| ++|++.|.++|++|.+.|+...       +..+.|+..     ++.++.+  .+++.    ++++|
T Consensus         2 ~~ihfiGIgG-~GMs~LA~~L~~~G~~VsGSD~~~~-------~~t~~L~~~-----Gi~i~~g--h~~~~----i~~~d   62 (89)
T d1j6ua1           2 MKIHFVGIGG-IGMSAVALHEFSNGNDVYGSNIEET-------ERTAYLRKL-----GIPIFVP--HSADN----WYDPD   62 (89)
T ss_dssp             CEEEEETTTS-HHHHHHHHHHHHTTCEEEEECSSCC-------HHHHHHHHT-----TCCEESS--CCTTS----CCCCS
T ss_pred             cEEEEEeECH-HHHHHHHHHHHhCCCeEEEEeCCCC-------hhHHHHHHC-----CCeEEee--ecccc----cCCCC
Confidence            4788888655 55 4789999999999999998762       455556655     3455444  22222    35789


Q ss_pred             EEEEccccC
Q 025660           85 GVLHVATPV   93 (249)
Q Consensus        85 ~vih~a~~~   93 (249)
                      .||...|+.
T Consensus        63 ~vV~SsAI~   71 (89)
T d1j6ua1          63 LVIKTPAVR   71 (89)
T ss_dssp             EEEECTTCC
T ss_pred             EEEEecCcC
Confidence            999998873

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.91  E-value=0.0015  Score=47.42  Aligned_cols=114  Identities=15%  Similarity=0.110  Sum_probs=64.6

Q ss_pred             CCeEEEeccchhhHHH--HHHHHHHC----CCeEEEEEcCCCCcccCCchhhhhhc----cC-CCCCCCeEEEEcCCCCh
Q 025660            5 KGRVCVTGGTGFIASW--LIMRLLDH----GYSVTTTVRSELDPEHRNSKDLSFLK----NL-PGASERLRIFHADLSHP   73 (249)
Q Consensus         5 ~~~vlItGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~~l~----~~-~~~~~~~~~~~~Dl~~~   73 (249)
                      .+||.|+|| |.+|..  ++..|+..    +.+++++++++        ++.+...    .. ...+...+     +...
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~--------~~~~~~~~~~~~~~~~~~~~~~-----i~~~   67 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDE--------ERLDAILTIAKKYVEEVGADLK-----FEKT   67 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCH--------HHHHHHHHHHHHHHHHTTCCCE-----EEEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCc--------hHHHHHHHHHHHHHHhcCCCeE-----EEEe
Confidence            358999995 778865  44455543    35999999987        4333211    10 00111122     2222


Q ss_pred             hhHHHHHcCCCEEEEccccCCCCC------------------CChH-------HHhhhhHHhHHHHHHHHHHhcCCcceE
Q 025660           74 DGFDAAIAGCTGVLHVATPVDFED------------------KEPE-------EVITQRAINGTLGILKSCLKSGTVKRV  128 (249)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~------------------~~~~-------~~~~~~n~~~t~~l~~~~~~~~~~~~~  128 (249)
                      .+..+.++++|+|+.+++......                  ....       -.....|+.-.+.+++.+.+.. ...+
T Consensus        68 td~~eaL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~-p~a~  146 (171)
T d1obba1          68 MNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAW  146 (171)
T ss_dssp             SCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-TTCE
T ss_pred             CChhhcccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHC-cCeE
Confidence            346678899999999987533200                  0000       0112357888888999998887 4444


Q ss_pred             EEEcc
Q 025660          129 VYTSS  133 (249)
Q Consensus       129 v~~SS  133 (249)
                      +..-|
T Consensus       147 ~i~~T  151 (171)
T d1obba1         147 YLQAA  151 (171)
T ss_dssp             EEECS
T ss_pred             EEEEC
Confidence            44433

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.014  Score=42.64  Aligned_cols=66  Identities=11%  Similarity=-0.043  Sum_probs=48.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+++|.|.| .|.||+.+++.|..-|.+|+..++...                ... ...       ...++++++++.+
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~----------------~~~-~~~-------~~~~~l~ell~~s   97 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK----------------LPL-GNA-------TQVQHLSDLLNMS   97 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC----------------CCC-TTC-------EECSCHHHHHHHC
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeecccccc----------------chh-hhh-------hhhhhHHHHHhhc
Confidence            457899997 899999999999999999999988651                000 001       1114677888889


Q ss_pred             CEEEEccccCC
Q 025660           84 TGVLHVATPVD   94 (249)
Q Consensus        84 d~vih~a~~~~   94 (249)
                      |+|+.++....
T Consensus        98 Dii~i~~plt~  108 (188)
T d1sc6a1          98 DVVSLHVPENP  108 (188)
T ss_dssp             SEEEECCCSST
T ss_pred             cceeecccCCc
Confidence            99887776543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.88  E-value=0.0021  Score=47.53  Aligned_cols=68  Identities=10%  Similarity=0.023  Sum_probs=47.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .++++.|.| .|-||+.+++.|..-|.+|++.++...       ......              ..+...+++.++++.+
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~-------~~~~~~--------------~~~~~~~~l~~ll~~s  105 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS-------DGVERA--------------LGLQRVSTLQDLLFHS  105 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC-------TTHHHH--------------HTCEECSSHHHHHHHC
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCccc-------ccchhh--------------hccccccchhhccccC
Confidence            467999998 899999999999999999999988751       000000              0122234677788888


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+|+.+....
T Consensus       106 D~i~~~~plt  115 (193)
T d1mx3a1         106 DCVTLHCGLN  115 (193)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEEeeccc
Confidence            8877666543

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.87  E-value=0.028  Score=40.18  Aligned_cols=34  Identities=12%  Similarity=0.153  Sum_probs=26.4

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~   39 (249)
                      +.+|.|.| +|.+|+..++.|.+. +.+++++....
T Consensus         3 kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~   37 (170)
T d1f06a1           3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRR   37 (170)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESS
T ss_pred             cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecc
Confidence            45799998 799999999999876 56777655443

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.85  E-value=0.006  Score=40.85  Aligned_cols=35  Identities=23%  Similarity=0.224  Sum_probs=31.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++++|.| +|++|-.++..|.+.|++|+++.|.+
T Consensus        20 ~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            357899998 89999999999999999999998876

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.79  E-value=0.0056  Score=41.51  Aligned_cols=33  Identities=33%  Similarity=0.499  Sum_probs=30.5

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++++|.| +|++|-.++..|.+.|.+|+++.|++
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            6789998 89999999999999999999998876

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.78  E-value=0.015  Score=41.71  Aligned_cols=76  Identities=13%  Similarity=0.060  Sum_probs=48.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      .+.+|+|.|+ |.+|...++.+...|. .|+++++++        ++.+...+...    .+++..+-.+.+...+... 
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~--------~k~~~~~~~ga----~~~i~~~~~~~~~~~~~~~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKE--------EKLKLAERLGA----DHVVDARRDPVKQVMELTRG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSH--------HHHHHHHHTTC----SEEEETTSCHHHHHHHHTTT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchh--------HHHHHHhhccc----ceeecCcccHHHHHHHhhCC
Confidence            3468999985 8899998888877785 667777776        66666655422    2344332222333333332 


Q ss_pred             -CCCEEEEcccc
Q 025660           82 -GCTGVLHVATP   92 (249)
Q Consensus        82 -~~d~vih~a~~   92 (249)
                       ++|+||.+.|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence             48999999885

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.76  E-value=0.0071  Score=41.68  Aligned_cols=35  Identities=20%  Similarity=0.275  Sum_probs=32.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++++|.| +|++|..++..|.+.|.+|+++.+.+
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            357899998 89999999999999999999999986

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.021  Score=40.90  Aligned_cols=58  Identities=14%  Similarity=0.104  Sum_probs=46.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+|+|.|.|.+..+|+-|+.-|.++|..|+....+.                                  ..+.+...+.
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t----------------------------------~~l~~~~~~a   83 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT----------------------------------AHLDEEVNKG   83 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------------SSHHHHHTTC
T ss_pred             ccceEEEEecCCccchHHHHHHHhccCceEEEeccc----------------------------------ccHHHHHhhc
Confidence            578999999999999999999999999998876654                                  1234456678


Q ss_pred             CEEEEccccCCC
Q 025660           84 TGVLHVATPVDF   95 (249)
Q Consensus        84 d~vih~a~~~~~   95 (249)
                      |++|..+|....
T Consensus        84 Divi~a~G~~~~   95 (170)
T d1a4ia1          84 DILVVATGQPEM   95 (170)
T ss_dssp             SEEEECCCCTTC
T ss_pred             cchhhccccccc
Confidence            888888886544

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.011  Score=42.16  Aligned_cols=67  Identities=15%  Similarity=0.035  Sum_probs=48.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .+|+++|.| .|.||+.+++.|...|.+|++.++++          ...++..           .|-.....+++++...
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp----------~~al~A~-----------~dG~~v~~~~~a~~~a   80 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDP----------INALQAA-----------MEGYEVTTMDEACQEG   80 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH----------HHHHHHH-----------HTTCEECCHHHHTTTC
T ss_pred             cCCEEEEec-cccccHHHHHHHHhCCCeeEeeeccc----------chhHHhh-----------cCceEeeehhhhhhhc
Confidence            578999998 99999999999999999999998876          1122211           1222223466777788


Q ss_pred             CEEEEcccc
Q 025660           84 TGVLHVATP   92 (249)
Q Consensus        84 d~vih~a~~   92 (249)
                      |++|-+.|-
T Consensus        81 divvtaTGn   89 (163)
T d1li4a1          81 NIFVTTTGC   89 (163)
T ss_dssp             SEEEECSSC
T ss_pred             cEEEecCCC
Confidence            888877664

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.62  E-value=0.014  Score=42.21  Aligned_cols=76  Identities=11%  Similarity=0.020  Sum_probs=50.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEE-cCCCC-hhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH-ADLSH-PDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~Dl~~-~~~~~~~~   80 (249)
                      .+.+|+|+|+ |.+|...+..+...|. +|+++++++        ++.+.-.++-.    .+++. -|-.+ .+.+.+..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~--------~kl~~Ak~~GA----~~~in~~~~~~~~~~~~~~~   95 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNK--------DKFEKAMAVGA----TECISPKDSTKPISEVLSEM   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG--------GGHHHHHHHTC----SEEECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcH--------HHHHHHHhcCC----cEEECccccchHHHHHHHHh
Confidence            3568999985 8899999999999985 899999988        66665555422    12221 22222 23333333


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|++|.+.+.
T Consensus        96 ~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          96 TGNNVGYTFEVIGH  109 (176)
T ss_dssp             HTSCCCEEEECSCC
T ss_pred             ccccceEEEEeCCc
Confidence            3  58999988885

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.59  E-value=0.0074  Score=40.96  Aligned_cols=35  Identities=20%  Similarity=0.120  Sum_probs=32.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++++|.| +|+||-.++..|.+.|.+|+++.|++
T Consensus        24 ~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          24 IPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            457899998 89999999999999999999999987

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.57  E-value=0.0087  Score=40.78  Aligned_cols=35  Identities=14%  Similarity=0.146  Sum_probs=32.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++++|.| +|+||..++..|.+.|.+|+++.+.+
T Consensus        25 ~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            457899998 89999999999999999999998876

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.57  E-value=0.0083  Score=44.47  Aligned_cols=35  Identities=17%  Similarity=0.117  Sum_probs=31.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++++|+|.| -|-+|+++++.|.+.|.+|++.+.+.
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~   60 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDT   60 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchH
Confidence            568999998 88899999999999999999988776

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.49  E-value=0.016  Score=41.67  Aligned_cols=74  Identities=11%  Similarity=-0.011  Sum_probs=49.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh----hhHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP----DGFDA   78 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~----~~~~~   78 (249)
                      .+.+|+|.|+ |.+|...++.+...|. +|+++++++        ++.+..+++-.    ..++  |..+.    +...+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~--------~kl~~a~~lGa----~~~i--~~~~~d~~~~~~~~   91 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK--------DKFPKAIELGA----TECL--NPKDYDKPIYEVIC   91 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG--------GGHHHHHHTTC----SEEE--CGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH--------HHHHHHHHcCC----cEEE--cCCCchhHHHHHHH
Confidence            3568999985 8899999999988886 788888887        66665555422    1222  32221    22322


Q ss_pred             HHc--CCCEEEEcccc
Q 025660           79 AIA--GCTGVLHVATP   92 (249)
Q Consensus        79 ~~~--~~d~vih~a~~   92 (249)
                      ...  .+|++|.+.+.
T Consensus        92 ~~~~~G~d~vid~~g~  107 (174)
T d1p0fa2          92 EKTNGGVDYAVECAGR  107 (174)
T ss_dssp             HHTTSCBSEEEECSCC
T ss_pred             HhcCCCCcEEEEcCCC
Confidence            232  58999988874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.48  E-value=0.0025  Score=46.86  Aligned_cols=34  Identities=12%  Similarity=0.165  Sum_probs=28.8

Q ss_pred             CeEEE-eccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCV-TGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlI-tGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .+++| +||+|.+|.+.++-....|.+|+++.|+.
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~   64 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR   64 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecc
Confidence            45666 69999999999888777899999999876

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.34  E-value=0.0011  Score=47.84  Aligned_cols=76  Identities=11%  Similarity=0.077  Sum_probs=43.7

Q ss_pred             CCeEEEeccchhhHHH-HHHHHHHC-----CCeEEEEEcCCCCcccCCchhhhhhc----cCC-CCCCCeEEEEcCCCCh
Q 025660            5 KGRVCVTGGTGFIASW-LIMRLLDH-----GYSVTTTVRSELDPEHRNSKDLSFLK----NLP-GASERLRIFHADLSHP   73 (249)
Q Consensus         5 ~~~vlItGatG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~l~----~~~-~~~~~~~~~~~Dl~~~   73 (249)
                      ..||.|+||++ +|.. ++..|+..     +.++++++.++        ++.+...    ... ..+....+..     .
T Consensus         3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~--------~~~~~~~~~~~~~~~~~~~~~~~~~-----~   68 (167)
T d1u8xx1           3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDK--------ERQDRIAGACDVFIREKAPDIEFAA-----T   68 (167)
T ss_dssp             CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCH--------HHHHHHHHHHHHHHHHHCTTSEEEE-----E
T ss_pred             CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCCh--------hHHHHHHHHHHHHHHHhCCCcceEe-----c
Confidence            45799999855 5543 44555543     14899999887        4433211    110 0011222221     1


Q ss_pred             hhHHHHHcCCCEEEEccccCC
Q 025660           74 DGFDAAIAGCTGVLHVATPVD   94 (249)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~   94 (249)
                      .+..+.++++|+||.+|+...
T Consensus        69 ~d~~eal~~AD~Vvitag~~~   89 (167)
T d1u8xx1          69 TDPEEAFTDVDFVMAHIRVGK   89 (167)
T ss_dssp             SCHHHHHSSCSEEEECCCTTH
T ss_pred             CChhhccCCCCEEEECCCcCC
Confidence            246677889999999998743

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.29  E-value=0.043  Score=37.72  Aligned_cols=66  Identities=21%  Similarity=0.330  Sum_probs=43.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHC-CCeEEEE-EcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc---
Q 025660            7 RVCVTGGTGFIASWLIMRLLDH-GYSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   81 (249)
                      ||.|.|++|-.|+.+++.+.+. ++++.+. ++..         ....+....      .-+..|.+.|+.+.+.++   
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~---------~~~~~~~~~------~DvvIDFS~p~~~~~~~~~~~   65 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD---------PLSLLTDGN------TEVVIDFTHPDVVMGNLEFLI   65 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC---------CTHHHHTTT------CSEEEECCCTTTHHHHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC---------chhhhcccc------CCEEEEcccHHHHHHHHHHHH
Confidence            6899999999999999988776 5777553 3332         112221111      126789999987777765   


Q ss_pred             --CCCEEE
Q 025660           82 --GCTGVL   87 (249)
Q Consensus        82 --~~d~vi   87 (249)
                        ++-.|+
T Consensus        66 ~~~~~~Vi   73 (135)
T d1yl7a1          66 DNGIHAVV   73 (135)
T ss_dssp             HTTCEEEE
T ss_pred             hcCCCEEE
Confidence              456666

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.28  E-value=0.01  Score=47.06  Aligned_cols=35  Identities=17%  Similarity=0.336  Sum_probs=31.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +.|+|+|+| +|.-|..++..|.++|++|+++.++.
T Consensus         1 k~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            357899998 89999999999999999999998876

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.28  E-value=0.024  Score=41.76  Aligned_cols=63  Identities=16%  Similarity=0.076  Sum_probs=45.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   84 (249)
                      +++|.|.| .|-||+.+++.|..-|.+|++.++...                ......        .+..++.++++.+|
T Consensus        45 ~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~----------------~~~~~~--------~~~~~l~~l~~~~D   99 (199)
T d1dxya1          45 QQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM----------------KGDHPD--------FDYVSLEDLFKQSD   99 (199)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC----------------SSCCTT--------CEECCHHHHHHHCS
T ss_pred             ceeeeeee-cccccccccccccccceeeeccCCccc----------------hhhhcc--------hhHHHHHHHHHhcc
Confidence            47899998 888999999999999999999988751                000001        11235777888899


Q ss_pred             EEEEcccc
Q 025660           85 GVLHVATP   92 (249)
Q Consensus        85 ~vih~a~~   92 (249)
                      +|+.+.-.
T Consensus       100 ~v~~~~pl  107 (199)
T d1dxya1         100 VIDLHVPG  107 (199)
T ss_dssp             EEEECCCC
T ss_pred             cceeeecc
Confidence            87766554

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.21  E-value=0.0089  Score=43.43  Aligned_cols=35  Identities=20%  Similarity=0.236  Sum_probs=31.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (249)
                      .++||+|+| +|..|...+..|.+.|+ +|+++.|+.
T Consensus         3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLG-AGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            468999999 79999999999999998 599999876

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.19  E-value=0.015  Score=42.19  Aligned_cols=35  Identities=20%  Similarity=0.159  Sum_probs=32.3

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++|+|+|+| +|..|-..+..|.++||+|+++.+.+
T Consensus        42 ~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          42 QKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            568999998 79999999999999999999999875

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.16  E-value=0.034  Score=39.82  Aligned_cols=81  Identities=12%  Similarity=0.085  Sum_probs=53.1

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCC--CChhhHHHHHc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL--SHPDGFDAAIA   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~   81 (249)
                      .+|+++|.|.+.-+|+-|+.-|.++|..|+....+..       .....-....    -......|+  ...+.+++...
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~lk~~~~   96 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI-------QKFTRGESLK----LNKHHVEDLGEYSEDLLKKCSL   96 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE-------EEEESCCCSS----CCCCEEEEEEECCHHHHHHHHH
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccc-------ccccccccee----eeeeccccccccchhHHhhccc
Confidence            5689999999999999999999999999987655430       0000000000    001122222  34566888888


Q ss_pred             CCCEEEEccccCCC
Q 025660           82 GCTGVLHVATPVDF   95 (249)
Q Consensus        82 ~~d~vih~a~~~~~   95 (249)
                      .+|+||...|..+.
T Consensus        97 ~aDIvIsavG~p~~  110 (171)
T d1edza1          97 DSDVVITGVPSENY  110 (171)
T ss_dssp             HCSEEEECCCCTTC
T ss_pred             cCCEEEEccCCCcc
Confidence            89999988886543

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.16  E-value=0.1  Score=34.81  Aligned_cols=75  Identities=12%  Similarity=0.123  Sum_probs=51.9

Q ss_pred             CCCCeEEEeccc----------hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCC
Q 025660            3 EGKGRVCVTGGT----------GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH   72 (249)
Q Consensus         3 ~~~~~vlItGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~   72 (249)
                      +..++|||.|+.          -+-+.+.+++|.+.|++++++.-++        +....-...      ..-++...-.
T Consensus         2 t~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NP--------eTVstd~d~------aD~lYfeplt   67 (121)
T d1a9xa4           2 TDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNP--------ETVSTDYDT------SDRLYFEPVT   67 (121)
T ss_dssp             SSSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCT--------TSSTTSTTS------SSEEECCCCS
T ss_pred             CCCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecCh--------hhhhcChhh------cCceEEccCC
Confidence            456899999974          3778899999999999999998887        222211111      1234555556


Q ss_pred             hhhHHHHHc--CCCEEEEccc
Q 025660           73 PDGFDAAIA--GCTGVLHVAT   91 (249)
Q Consensus        73 ~~~~~~~~~--~~d~vih~a~   91 (249)
                      .+.+.++++  ++|.|+-..|
T Consensus        68 ~e~v~~Ii~~E~p~~ii~~~G   88 (121)
T d1a9xa4          68 LEDVLEIVRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHhCCCEEEeehh
Confidence            777888775  6888775544

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.10  E-value=0.017  Score=38.75  Aligned_cols=34  Identities=24%  Similarity=0.107  Sum_probs=31.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .++++|.| +|++|..++..|.+.|.+|+++.|.+
T Consensus        22 ~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          22 GSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            47899998 89999999999999999999999976

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.06  E-value=0.0091  Score=43.88  Aligned_cols=39  Identities=18%  Similarity=0.213  Sum_probs=31.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhc
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK   54 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~   54 (249)
                      |+|.|.| .|++|..++..| ++|++|+++|.++        .+.+.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~--------~~v~~l~   39 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILP--------SKVDKIN   39 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCH--------HHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCH--------HHHHHHh
Confidence            4799997 899999998755 6799999999887        5666554

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.94  E-value=0.012  Score=45.18  Aligned_cols=31  Identities=19%  Similarity=0.188  Sum_probs=29.1

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+| +|..|..++.+|.++|.+|++++++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            99998 79999999999999999999999864

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.91  E-value=0.13  Score=38.73  Aligned_cols=33  Identities=21%  Similarity=0.167  Sum_probs=28.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRS   38 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (249)
                      ..+|+|.| .|.+|+++++.|...|. +++++|.+
T Consensus        30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            36899999 67799999999999996 78888764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.88  E-value=0.12  Score=34.79  Aligned_cols=74  Identities=12%  Similarity=0.081  Sum_probs=53.9

Q ss_pred             CCCeEEEeccc----------hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCCh
Q 025660            4 GKGRVCVTGGT----------GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP   73 (249)
Q Consensus         4 ~~~~vlItGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~   73 (249)
                      ..++|||.|+.          -+-+.+.+++|.+.|++++.+.-++        +....-...      ..-++...-..
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP--------~TVstd~d~------aD~lYfePlt~   71 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNP--------ATIMTDPEM------ADATYIEPIHW   71 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCT--------TCGGGCGGG------SSEEECSCCCH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCch--------HhhhcChhh------cceeeeecCCH
Confidence            45899999984          5678899999999999999998887        332222211      12356666778


Q ss_pred             hhHHHHHc--CCCEEEEccc
Q 025660           74 DGFDAAIA--GCTGVLHVAT   91 (249)
Q Consensus        74 ~~~~~~~~--~~d~vih~a~   91 (249)
                      +++.++++  ++|.|+-..|
T Consensus        72 e~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          72 EVVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHhCcCCeEEEee
Confidence            88888886  6899886655

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.86  E-value=0.026  Score=40.99  Aligned_cols=67  Identities=15%  Similarity=-0.004  Sum_probs=46.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .++++.|.| .|.||+.+++.+..-|.+|++.++..        .........      +        ...+++++++.+
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~--------~~~~~~~~~------~--------~~~~l~ell~~s   99 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYV--------SPARAAQLG------I--------ELLSLDDLLARA   99 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS--------CHHHHHHHT------C--------EECCHHHHHHHC
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCC--------ChhHHhhcC------c--------eeccHHHHHhhC
Confidence            457888888 78999999999998899999998865        111111100      1        123567788889


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+|+.+....
T Consensus       100 Div~~~~Plt  109 (184)
T d1ygya1         100 DFISVHLPKT  109 (184)
T ss_dssp             SEEEECCCCS
T ss_pred             CEEEEcCCCC
Confidence            9887666553

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.82  E-value=0.027  Score=41.23  Aligned_cols=69  Identities=12%  Similarity=0.022  Sum_probs=47.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .++++.|.| .|.||+.+++.+..-|.+|.+.++...     . .......              .....+++.++++.+
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~-----~-~~~~~~~--------------~~~~~~~l~~ll~~s  104 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA-----S-SSDEASY--------------QATFHDSLDSLLSVS  104 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC-----C-HHHHHHH--------------TCEECSSHHHHHHHC
T ss_pred             cccceEEee-cccchHHHHHHHHhhcccccccccccc-----c-cchhhcc--------------cccccCCHHHHHhhC
Confidence            358999998 788999999999999999999987651     0 1111100              111225678888899


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+|+.+....
T Consensus       105 D~v~l~~plt  114 (191)
T d1gdha1         105 QFFSLNAPST  114 (191)
T ss_dssp             SEEEECCCCC
T ss_pred             CeEEecCCCC
Confidence            9987666543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.088  Score=37.25  Aligned_cols=32  Identities=25%  Similarity=0.361  Sum_probs=26.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC-CCeEEEEE
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTV   36 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~   36 (249)
                      ..+|.|.|++|-.|+.+++.+.+. +.++++..
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~   36 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAAL   36 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            458999999999999999999887 56775543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.77  E-value=0.014  Score=40.91  Aligned_cols=34  Identities=21%  Similarity=0.358  Sum_probs=30.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (249)
                      +++++||+|| |.+|..-++.|++.|.+|++++-.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999995 889999999999999999999654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.60  E-value=0.026  Score=41.16  Aligned_cols=69  Identities=16%  Similarity=0.067  Sum_probs=46.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      .++++.|.| .|.||+.+++.|..-|.+|...++...     . .......              .+....++.++++++
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~-----~-~~~~~~~--------------~~~~~~~l~~~l~~s  101 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRL-----P-ESVEKEL--------------NLTWHATREDMYPVC  101 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCC-----C-HHHHHHH--------------TCEECSSHHHHGGGC
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeeccc-----c-ccccccc--------------cccccCCHHHHHHhc
Confidence            457899998 888999999999988999999998751     0 1111100              112235566778888


Q ss_pred             CEEEEccccC
Q 025660           84 TGVLHVATPV   93 (249)
Q Consensus        84 d~vih~a~~~   93 (249)
                      |+|+.+....
T Consensus       102 D~v~~~~plt  111 (188)
T d2naca1         102 DVVTLNCPLH  111 (188)
T ss_dssp             SEEEECSCCC
T ss_pred             cchhhccccc
Confidence            8876665543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.49  E-value=0.019  Score=44.12  Aligned_cols=34  Identities=29%  Similarity=0.291  Sum_probs=30.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .|+|+|+| +|.-|...+.+|.+.|++|+++.+++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            37899998 79999999999999999999998765

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.45  E-value=0.094  Score=40.78  Aligned_cols=34  Identities=21%  Similarity=0.212  Sum_probs=30.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (249)
                      ++++|+|-| -|-+|+++++.|.+.|.+|++++-+
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            457999998 6999999999999999999888653

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.04  Score=45.52  Aligned_cols=82  Identities=15%  Similarity=0.133  Sum_probs=50.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCC-------cccCC----chhh----hhhccCCCCCCCeEEEEcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELD-------PEHRN----SKDL----SFLKNLPGASERLRIFHAD   69 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------~~~~~----~~~~----~~l~~~~~~~~~~~~~~~D   69 (249)
                      .+|||.|+ |.+|+++++.|+..|. +++++|.+.-+       -..+.    ..+.    +.+..+. ...++..+..+
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~n-p~v~i~~~~~~  115 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRV-PNCNVVPHFNK  115 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHS-TTCCCEEECSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhC-CCCceEeeecc
Confidence            58999996 5599999999999997 88888764310       00010    0111    1111111 12356666666


Q ss_pred             CCChhhHHHHHcCCCEEEEccc
Q 025660           70 LSHPDGFDAAIAGCTGVLHVAT   91 (249)
Q Consensus        70 l~~~~~~~~~~~~~d~vih~a~   91 (249)
                      +.+..  .++++++|+||.+..
T Consensus       116 i~~~~--~~~~~~~DlVi~~~D  135 (426)
T d1yovb1         116 IQDFN--DTFYRQFHIIVCGLD  135 (426)
T ss_dssp             GGGBC--HHHHTTCSEEEECCS
T ss_pred             ccchH--HHHHHhcchheeccC
Confidence            65543  457888999986543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.35  E-value=0.068  Score=38.03  Aligned_cols=76  Identities=12%  Similarity=0.044  Sum_probs=47.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEc-CCCC-hhhHHHHH
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA-DLSH-PDGFDAAI   80 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-Dl~~-~~~~~~~~   80 (249)
                      .+.+|+|.|++| +|...+..+...|. +|+++++++        ++.+...++-.    .+++.. +-.+ .+...+..
T Consensus        28 ~g~~VlI~G~Gg-~g~~~~~~~~~~g~~~Vi~~~~~~--------~rl~~a~~~GA----d~~in~~~~~~~~~~~~~~~   94 (175)
T d1cdoa2          28 PGSTCAVFGLGA-VGLAAVMGCHSAGAKRIIAVDLNP--------DKFEKAKVFGA----TDFVNPNDHSEPISQVLSKM   94 (175)
T ss_dssp             TTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCG--------GGHHHHHHTTC----CEEECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEEecCC-ccchHHHHHHHHhhchheeecchH--------HHHHHHHHcCC----cEEEcCCCcchhHHHHHHhh
Confidence            346899999655 77777777777765 788888887        67776666532    233321 1111 23333333


Q ss_pred             c--CCCEEEEcccc
Q 025660           81 A--GCTGVLHVATP   92 (249)
Q Consensus        81 ~--~~d~vih~a~~   92 (249)
                      .  ++|+++.+.|.
T Consensus        95 ~~~G~d~vid~~G~  108 (175)
T d1cdoa2          95 TNGGVDFSLECVGN  108 (175)
T ss_dssp             HTSCBSEEEECSCC
T ss_pred             ccCCcceeeeecCC
Confidence            2  58999999884

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.34  E-value=0.021  Score=44.60  Aligned_cols=35  Identities=26%  Similarity=0.248  Sum_probs=31.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++|+|+| +|.-|...+..|.++|++|+++.+++
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            457899999 79999999999999999999998765

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.31  E-value=0.023  Score=43.00  Aligned_cols=34  Identities=26%  Similarity=0.283  Sum_probs=31.2

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .+||+|+| .|.-|..++..|.++|++|+++.|++
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            46899998 79999999999999999999999875

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.071  Score=41.57  Aligned_cols=26  Identities=23%  Similarity=0.239  Sum_probs=23.5

Q ss_pred             chhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660           14 TGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus        14 tG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ||-.|.+|++.|+.+|++|+.+.+..
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecCC
Confidence            48999999999999999999998754

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.02  E-value=0.027  Score=39.51  Aligned_cols=36  Identities=22%  Similarity=0.220  Sum_probs=29.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~   39 (249)
                      ++|+|.|.|+||-||...++-+.+.  .++|.+++-..
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            4689999999999999988887665  47888887654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.98  E-value=0.023  Score=43.47  Aligned_cols=33  Identities=21%  Similarity=0.166  Sum_probs=29.8

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+|+| +|.-|...+.+|.++|++|+++.+++
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4799999 59999999999999999999998764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.94  E-value=0.041  Score=41.26  Aligned_cols=35  Identities=31%  Similarity=0.387  Sum_probs=31.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++|+|+| +|..|...+..|.++|++|+++.++.
T Consensus        48 ~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          48 NKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            457999998 79999999999999999999998765

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.87  E-value=0.031  Score=39.53  Aligned_cols=34  Identities=18%  Similarity=0.010  Sum_probs=29.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC--eEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~   39 (249)
                      +|+|+|+| +|++|-.++..|.+.++  +|+++.+++
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            68999998 79999999999999885  788887765

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.81  E-value=0.028  Score=34.66  Aligned_cols=34  Identities=24%  Similarity=0.212  Sum_probs=30.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +|+|.|.| +|.+|+-++.+-.+-|.+|++++-++
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            46899998 89999999999999999999998776

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.71  E-value=0.006  Score=43.99  Aligned_cols=116  Identities=13%  Similarity=0.039  Sum_probs=60.5

Q ss_pred             CeEEEeccc-hhhHHHHHHHHHHCC----CeEEEEEcCCCCcccCCchhhhhhccC-----CCCCCCeEEEEcCCCChhh
Q 025660            6 GRVCVTGGT-GFIASWLIMRLLDHG----YSVTTTVRSELDPEHRNSKDLSFLKNL-----PGASERLRIFHADLSHPDG   75 (249)
Q Consensus         6 ~~vlItGat-G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~Dl~~~~~   75 (249)
                      +||.|+||+ .+.+..++.-+....    .++..+++++.      ..+.+.+...     ...+....+     ....+
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~------~~~~~~~d~~~~~~~~~~~~~~~~-----~~~td   70 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEG------KEKLEIVGALAKRMVEKAGVPIEI-----HLTLD   70 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGG------HHHHHHHHHHHHHHHHHTTCCCEE-----EEESC
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCcc------HHHHHHHHHHHHHHHHhcCCCcee-----eecCC
Confidence            579999974 334444444444322    38888888761      1112222110     001111111     11233


Q ss_pred             HHHHHcCCCEEEEccccCCCCCCChH-------------------HHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           76 FDAAIAGCTGVLHVATPVDFEDKEPE-------------------EVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        76 ~~~~~~~~d~vih~a~~~~~~~~~~~-------------------~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      ..+.++++|+||.+|+..........                   -.....|+.-.+.+++.+.+.. +..++..-|
T Consensus        71 ~~~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~-pda~~i~vt  146 (169)
T d1s6ya1          71 RRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFT  146 (169)
T ss_dssp             HHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECS
T ss_pred             chhhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC-CCeEEEEeC
Confidence            45568899999999986532000000                   0123457777788888888887 445555444

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.68  E-value=0.025  Score=40.76  Aligned_cols=34  Identities=15%  Similarity=0.217  Sum_probs=28.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++++|||.| +|+.+++++..|.+.| +|+++.|+.
T Consensus        17 ~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~   50 (177)
T d1nvta1          17 KDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTV   50 (177)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhh
Confidence            568999999 5669999999987666 999999987

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.55  E-value=0.039  Score=38.63  Aligned_cols=35  Identities=17%  Similarity=0.240  Sum_probs=28.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~   39 (249)
                      ||+|.|.|+||.||...+.-+.+.  .++|.+++-..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            468999999999999998877766  46888887554

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.49  E-value=0.03  Score=43.21  Aligned_cols=32  Identities=22%  Similarity=0.180  Sum_probs=29.7

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +|+|+| +|..|..++..|.+.|++|+++.|++
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            799999 67999999999999999999998876

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.25  E-value=0.031  Score=43.72  Aligned_cols=33  Identities=12%  Similarity=0.114  Sum_probs=30.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..|+|+| +|.-|..++.+|.+.|++|+++.+++
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4699998 89999999999999999999998875

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.24  E-value=0.15  Score=37.37  Aligned_cols=32  Identities=16%  Similarity=0.224  Sum_probs=27.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (249)
                      |||++.| ++..|..+++.|+++||+|.++...
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~   32 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTV   32 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcC
Confidence            4789997 6778999999999999999877654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.24  E-value=0.21  Score=37.65  Aligned_cols=34  Identities=21%  Similarity=0.317  Sum_probs=30.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (249)
                      ++++|+|-| -|-+|+++++.|.+.|.+|++++-.
T Consensus        30 ~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          30 EGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            568999998 8999999999999999999887643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.16  E-value=0.063  Score=37.46  Aligned_cols=34  Identities=29%  Similarity=0.297  Sum_probs=28.8

Q ss_pred             CeEEEe-ccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVT-GGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +.++|. .++||||..++..|.+.|++|+++.+.+
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            455554 3569999999999999999999999876

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=93.12  E-value=0.044  Score=42.57  Aligned_cols=32  Identities=22%  Similarity=0.501  Sum_probs=28.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (249)
                      .|+|+| +|.+|..++.+|.++|+ +|++++|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            699998 78999999999999995 799999874

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.09  E-value=0.052  Score=42.93  Aligned_cols=35  Identities=20%  Similarity=0.127  Sum_probs=30.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~   39 (249)
                      .+|+|+|+| +|.-|..++..|+++|  ++|+++.|+.
T Consensus         3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            567899998 7999999999999876  6999998875

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.03  E-value=0.64  Score=32.85  Aligned_cols=75  Identities=12%  Similarity=0.177  Sum_probs=46.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEc-CCCCcccCCchhhhhhccCCCCCCCeEEEEcC-----------CC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVR-SELDPEHRNSKDLSFLKNLPGASERLRIFHAD-----------LS   71 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~D-----------l~   71 (249)
                      ..+|.|-| -|-||+.+++.|.++. .+|+++.- ++       ......+....     ...+..+           +.
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~-------~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~   68 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKP-------DFEAYRAKELG-----IPVYAASEEFIPRFEKEGFE   68 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSC-------SHHHHHHHHTT-----CCEEESSGGGHHHHHHHTCC
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCC-------hHHHHHhhhcC-----ceeecccccceeeecccCcc
Confidence            35899999 6999999999998865 57766543 22       12222332221     1112211           22


Q ss_pred             ChhhHHHHHcCCCEEEEcccc
Q 025660           72 HPDGFDAAIAGCTGVLHVATP   92 (249)
Q Consensus        72 ~~~~~~~~~~~~d~vih~a~~   92 (249)
                      ....+..+.+++|+|+-|.|.
T Consensus        69 ~~~~~~~~~~~vDvViEcTG~   89 (172)
T d2czca2          69 VAGTLNDLLEKVDIIVDATPG   89 (172)
T ss_dssp             CSCBHHHHHTTCSEEEECCST
T ss_pred             ccchhhhhhccCCEEEECCCC
Confidence            234566667789999999986

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.99  E-value=0.046  Score=40.36  Aligned_cols=31  Identities=29%  Similarity=0.251  Sum_probs=29.0

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+| +|.-|...+..|.++|++|+++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            79998 89999999999999999999999875

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.94  E-value=0.053  Score=40.80  Aligned_cols=35  Identities=26%  Similarity=0.215  Sum_probs=31.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++++|+|-| -|-+|+++++.|.+.|.+|++.+.+.
T Consensus        38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~   72 (230)
T d1leha1          38 EGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNK   72 (230)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccH
Confidence            568999998 89999999999999999999987765

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=92.90  E-value=0.048  Score=41.77  Aligned_cols=31  Identities=19%  Similarity=0.155  Sum_probs=28.8

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+| +|..|..++.+|.++|++|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            78998 79999999999999999999999864

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.81  E-value=0.058  Score=38.39  Aligned_cols=35  Identities=17%  Similarity=0.320  Sum_probs=29.5

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..++|+|+| +|++|-.++..|.+.|.+|+++.+..
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence            346899998 89999999999999999887776654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.77  E-value=0.072  Score=41.28  Aligned_cols=35  Identities=23%  Similarity=0.303  Sum_probs=30.8

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      +.++|+|+| +|.-|...+.+|.++|++|+++-.+.
T Consensus         4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            456899998 89999999999999999999997654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.65  E-value=0.29  Score=33.49  Aligned_cols=34  Identities=24%  Similarity=0.379  Sum_probs=29.6

Q ss_pred             CCeEEEeccc---hhhHHHHHHHHHHCCCeEEEEEcC
Q 025660            5 KGRVCVTGGT---GFIASWLIMRLLDHGYSVTTTVRS   38 (249)
Q Consensus         5 ~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~   38 (249)
                      .++|.|.||+   +-.|..+++.|.+.|++|+.+.-+
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            4689999998   789999999999999998877543

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.56  E-value=0.034  Score=39.89  Aligned_cols=33  Identities=30%  Similarity=0.362  Sum_probs=27.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR   37 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   37 (249)
                      |+.+|+|+| +|++|-.++..|.+.|.+|.++.+
T Consensus         2 m~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           2 LKAPVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CCSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            345799998 899999999999999987655544

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.54  E-value=0.084  Score=34.98  Aligned_cols=35  Identities=29%  Similarity=0.239  Sum_probs=28.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHH---CCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLD---HGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~   39 (249)
                      ..++++|.| +|++|-.++..|.+   +|.+|+++.|.+
T Consensus        19 ~p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             cCCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            357899999 59999999976554   456899998876

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.45  E-value=0.099  Score=44.34  Aligned_cols=32  Identities=19%  Similarity=0.247  Sum_probs=27.4

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRS   38 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (249)
                      .+|+|.|+ |.+|..+++.|+..|. +++++|.+
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            58999996 6699999999999995 78888654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.31  E-value=0.067  Score=39.77  Aligned_cols=33  Identities=24%  Similarity=0.300  Sum_probs=29.2

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (249)
                      ++|+|+| +|.-|...+..|.++|. +|+++.+++
T Consensus         1 P~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           1 PRVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CCEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4799998 79999999999999995 799998865

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.23  E-value=0.14  Score=36.83  Aligned_cols=80  Identities=9%  Similarity=0.105  Sum_probs=46.0

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCC----CCCeE-EEEcCCCChhhHHHH
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGA----SERLR-IFHADLSHPDGFDAA   79 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~----~~~~~-~~~~Dl~~~~~~~~~   79 (249)
                      -||.|.| .|.||+.+++.|.+++ .+|+++....      .......+......    ..... +-...+.-...+..+
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~   74 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTS------PNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDL   74 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSS------CSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHH
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCC------CcHHHHHhcccCcceeccCccceeccccceecCCchhhh
Confidence            3799998 8999999999999875 6887775433      11222222211100    00000 001112223355666


Q ss_pred             HcCCCEEEEcccc
Q 025660           80 IAGCTGVLHVATP   92 (249)
Q Consensus        80 ~~~~d~vih~a~~   92 (249)
                      .+++|+|+-|-|.
T Consensus        75 ~~~vDiViecTG~   87 (178)
T d1b7go1          75 IKTSDIVVDTTPN   87 (178)
T ss_dssp             HHHCSEEEECCST
T ss_pred             hhcCCEEEECCCC
Confidence            6789999999885

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.21  E-value=0.69  Score=33.83  Aligned_cols=94  Identities=17%  Similarity=0.117  Sum_probs=61.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCC----------
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL----------   70 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl----------   70 (249)
                      .+.+|.|+| -|.-|..++.+|.+.|.   +.++++.+.        +   .|.....   ...+..+.-          
T Consensus        14 ~~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~--------~---~L~~~~~---~~ki~ig~~~t~g~Gag~~   78 (209)
T d2vapa1          14 TKAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDA--------Q---QLIRTKA---DKKILIGKKLTRGLGAGGN   78 (209)
T ss_dssp             TCCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBH--------H---HHHTSCC---SEEEECCTTTTTTBCCTTC
T ss_pred             cCCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCH--------H---HHhcCCc---chhcccccccccccccccc
Confidence            456899998 77899999999999874   445555544        2   2222211   222332221          


Q ss_pred             ---------CChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC
Q 025660           71 ---------SHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG  123 (249)
Q Consensus        71 ---------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~  123 (249)
                               .+.+.+.+.++++|.|+-+||....           +...++..+++.+++.+
T Consensus        79 p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGG-----------TGsgaapvia~~ake~g  129 (209)
T d2vapa1          79 PKIGEEAAKESAEEIKAAIQDSDMVFITCGLGGG-----------TGTGSAPVVAEISKKIG  129 (209)
T ss_dssp             HHHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSS-----------HHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCC-----------ccccHHHHHHHHHHHcC
Confidence                     1224777788899999999998665           23455666888888876

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=92.10  E-value=0.13  Score=33.87  Aligned_cols=35  Identities=20%  Similarity=0.241  Sum_probs=28.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHH---CCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLD---HGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~   39 (249)
                      ..++++|.| +|++|-.++..|.+   .|.+|+++.|.+
T Consensus        17 ~p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             cCCeEEEEC-CChHHHHHHHHhHhhcccccccceecccc
Confidence            357899998 79999999976554   488999999876

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=92.10  E-value=0.13  Score=37.65  Aligned_cols=86  Identities=23%  Similarity=0.201  Sum_probs=46.9

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCch-hhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSK-DLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   81 (249)
                      ..|+|++.| ++..+..+++.|++.|++|.++...+.....+... ....+... .....+........+.+...+.++ 
T Consensus         2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   79 (206)
T d1fmta2           2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVL-AEEKGLPVFQPVSLRPQENQQLVAE   79 (206)
T ss_dssp             CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHH-HHHTTCCEECCSCSCSHHHHHHHHH
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhh-hhccCccccccccccchhhHHHHhh
Confidence            456899998 57788899999999999987766443110000000 00000000 001134555665555555556655 


Q ss_pred             -CCCEEEEccc
Q 025660           82 -GCTGVLHVAT   91 (249)
Q Consensus        82 -~~d~vih~a~   91 (249)
                       ++|+++-+..
T Consensus        80 ~~~d~~v~~~~   90 (206)
T d1fmta2          80 LQADVMVVVAY   90 (206)
T ss_dssp             TTCSEEEEESC
T ss_pred             hcceEEEeecc
Confidence             5787765544

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.07  E-value=0.42  Score=31.47  Aligned_cols=32  Identities=16%  Similarity=0.374  Sum_probs=28.0

Q ss_pred             CeEEEeccc---hhhHHHHHHHHHHCCCeEEEEEc
Q 025660            6 GRVCVTGGT---GFIASWLIMRLLDHGYSVTTTVR   37 (249)
Q Consensus         6 ~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r   37 (249)
                      |+|.|.|++   +-.|..+.+.|++.|++|+.+..
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP   36 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP   36 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcc
Confidence            579999988   77999999999999999887743

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=91.83  E-value=0.2  Score=33.58  Aligned_cols=94  Identities=13%  Similarity=0.075  Sum_probs=56.3

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc-C
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-G   82 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~   82 (249)
                      +.+|+|.| +|.+|++|++.+... ++++++..-+.+       .+...      .-.++.++     ..+.+.++.+ .
T Consensus         3 ~~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~-------~k~G~------~I~Gi~V~-----~~~~l~~~~~~~   63 (126)
T d2dt5a2           3 KWGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDP-------EKVGR------PVRGGVIE-----HVDLLPQRVPGR   63 (126)
T ss_dssp             CEEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCT-------TTTTC------EETTEEEE-----EGGGHHHHSTTT
T ss_pred             CceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCch-------HhcCC------EECCEEEe-----cHHHHHHHHhhc
Confidence            45899998 688999999987543 678887765541       11110      00134444     3345666665 3


Q ss_pred             CCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcccc
Q 025660           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (249)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS~~  135 (249)
                      ++.++-+...                 ...+.+++.|.+.+ ++.+..++...
T Consensus        64 i~iai~~i~~-----------------~~~~~I~d~l~~~g-Ik~I~~f~~~~   98 (126)
T d2dt5a2          64 IEIALLTVPR-----------------EAAQKAADLLVAAG-IKGILNFAPVV   98 (126)
T ss_dssp             CCEEEECSCH-----------------HHHHHHHHHHHHHT-CCEEEECSSSC
T ss_pred             ccEEEEeCCH-----------------HHHHHHHHHHHHcC-CCEEeecCcee
Confidence            5554433221                 12245777788888 88888887654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.75  E-value=0.16  Score=35.73  Aligned_cols=69  Identities=12%  Similarity=0.029  Sum_probs=49.9

Q ss_pred             CCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      ..+|+++|.| =|.+|+.++++|...|.+|+++.+++          ...|+..           .|=.....+.++++.
T Consensus        21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DP----------i~alqA~-----------mdGf~v~~~~~a~~~   78 (163)
T d1v8ba1          21 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDP----------ICAIQAV-----------MEGFNVVTLDEIVDK   78 (163)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCH----------HHHHHHH-----------TTTCEECCHHHHTTT
T ss_pred             ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCc----------hhhHHHH-----------hcCCccCchhHcccc
Confidence            3578999998 89999999999999999999998876          2233222           122223345677888


Q ss_pred             CCEEEEccccC
Q 025660           83 CTGVLHVATPV   93 (249)
Q Consensus        83 ~d~vih~a~~~   93 (249)
                      .|++|-+-|-.
T Consensus        79 aDi~vTaTGn~   89 (163)
T d1v8ba1          79 GDFFITCTGNV   89 (163)
T ss_dssp             CSEEEECCSSS
T ss_pred             CcEEEEcCCCC
Confidence            88888776653

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.30  E-value=0.11  Score=37.58  Aligned_cols=33  Identities=15%  Similarity=0.089  Sum_probs=27.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC--CeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~   39 (249)
                      |||+|.| +|++|-.++..|.+.+  .+|+++.|++
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            4799998 6899999999998874  5888888765

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.26  E-value=0.11  Score=36.29  Aligned_cols=31  Identities=26%  Similarity=0.282  Sum_probs=26.9

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ||+|+| +|++|-.++..|. ++.+|+++.|.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            799998 7899999999884 588999998865

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.07  E-value=0.017  Score=43.17  Aligned_cols=27  Identities=30%  Similarity=0.263  Sum_probs=23.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVT   33 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~   33 (249)
                      |+|+|+| +|.+|...+.+|.++|++|+
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCce
Confidence            4799998 79999999999999998643

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.73  E-value=0.094  Score=36.34  Aligned_cols=77  Identities=14%  Similarity=0.082  Sum_probs=41.4

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCC--------CCCCeEEEEcCCCChhhHHHH
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--------ASERLRIFHADLSHPDGFDAA   79 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~Dl~~~~~~~~~   79 (249)
                      |-++| +|.+|+++++.|.+.++.+.+.+|+.        ++.+.+.+...        ......++..-+. ++++.++
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~--------~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~-d~~i~~v   71 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSI--------DRARNLAEVYGGKAATLEKHPELNGVVFVIVP-DRYIKTV   71 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSH--------HHHHHHHHHTCCCCCSSCCCCC---CEEECSC-TTTHHHH
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCCh--------hhhcchhhcccccccchhhhhccCcEEEEecc-chhhhHH
Confidence            34676 89999999998755444446788877        55554432211        0111222222232 3456666


Q ss_pred             HcCC----CEEEEccccCC
Q 025660           80 IAGC----TGVLHVATPVD   94 (249)
Q Consensus        80 ~~~~----d~vih~a~~~~   94 (249)
                      ++..    .+|+|+++..+
T Consensus        72 ~~~l~~~~~ivi~~s~~~~   90 (153)
T d2i76a2          72 ANHLNLGDAVLVHCSGFLS   90 (153)
T ss_dssp             HTTTCCSSCCEEECCSSSC
T ss_pred             Hhhhcccceeeeecccchh
Confidence            6542    57888887643

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.47  E-value=0.32  Score=35.49  Aligned_cols=81  Identities=12%  Similarity=0.158  Sum_probs=44.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCC-chhhhhhccCCCCCCCeEEEE-cCCCChhhHHHHHc-C
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRN-SKDLSFLKNLPGASERLRIFH-ADLSHPDGFDAAIA-G   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~-~   82 (249)
                      |+|++.| ++..|..+++.|++.|++|.++...+..+..+. ......+...    .++.++. .++.+++.++.+.+ +
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~----~~i~~~~~~~~~~~~~~~~i~~~~   75 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAE----RGIPVYAPDNVNHPLWVERIAQLS   75 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHH----HTCCEECCSCCCSHHHHHHHHHTC
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHH----cCCcceecccccchhhhhhhhhhc
Confidence            4688887 455899999999999999977664331100000 0011111111    1344444 45666665554443 6


Q ss_pred             CCEEEEccc
Q 025660           83 CTGVLHVAT   91 (249)
Q Consensus        83 ~d~vih~a~   91 (249)
                      +|+++-...
T Consensus        76 ~Dlii~~g~   84 (203)
T d2blna2          76 PDVIFSFYY   84 (203)
T ss_dssp             CSEEEEESC
T ss_pred             ccceeeeec
Confidence            898876654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.30  E-value=0.9  Score=33.79  Aligned_cols=34  Identities=24%  Similarity=0.325  Sum_probs=28.7

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHH-CCCeEEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRS   38 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~   38 (249)
                      ++++|.|-| .|-+|+++++.|.+ .|..|++++-+
T Consensus        30 ~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          30 KKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            568999998 89999999999975 59999887643

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.16  E-value=0.16  Score=34.57  Aligned_cols=35  Identities=23%  Similarity=0.231  Sum_probs=28.9

Q ss_pred             CCeEEEeccchhhHHHHHHHHH----HCCCeEEEEEcCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLL----DHGYSVTTTVRSEL   40 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~----~~g~~V~~~~r~~~   40 (249)
                      .++++|.| +|++|-.++..|.    +.|.+|+.+.+++.
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            46899998 6999999998885    35899999988763

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=90.02  E-value=2  Score=30.80  Aligned_cols=91  Identities=14%  Similarity=0.129  Sum_probs=59.8

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcC-C------------
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD-L------------   70 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~D-l------------   70 (249)
                      ||.|+| -|.-|..++.+|.+.+.   +.++++.+.           +.|...+.   ...+..+. +            
T Consensus         2 kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~-----------~~L~~~~a---~~ki~iG~~~t~G~G~g~~p~~   66 (194)
T d1w5fa1           2 KIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDL-----------QVLEASNA---DVKIQIGENITRGLGAGGRPEI   66 (194)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCH-----------HHHHTCCC---SEEEECCTTTTTTSCCTTCHHH
T ss_pred             eEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCH-----------HHHhcCCc---ceEEecccccCCCcccccCchh
Confidence            688998 67799999999998773   445555544           22222221   22333332 1            


Q ss_pred             ------CChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC
Q 025660           71 ------SHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG  123 (249)
Q Consensus        71 ------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~  123 (249)
                            .+.+.+.+.+++.|.|+-+||....           +...++..+++.+++.+
T Consensus        67 g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGg-----------TGtgaapviA~~ake~g  114 (194)
T d1w5fa1          67 GEQAALESEEKIREVLQDTHMVFITAGFGGG-----------TGTGASPVIAKIAKEMG  114 (194)
T ss_dssp             HHHHHHHTHHHHHHHTTTCSEEEEEEETTSS-----------HHHHHHHHHHHHHHHTT
T ss_pred             hHhHHHHHHHHHHHHhcCCCeEEEEEecCCC-----------cccchHHHHHHHHHHcC
Confidence                  1235677778899999999998665           33556667888888877

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.93  E-value=0.16  Score=39.49  Aligned_cols=31  Identities=26%  Similarity=0.262  Sum_probs=28.3

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+| +|.-|...+.+|.++|++|+++.++.
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            78998 79999999999999999999998765

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.77  E-value=0.092  Score=38.78  Aligned_cols=76  Identities=20%  Similarity=0.199  Sum_probs=51.3

Q ss_pred             CCeEEEeccc-hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcCC
Q 025660            5 KGRVCVTGGT-GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (249)
Q Consensus         5 ~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (249)
                      +.+||=.|++ |..=.+|++ ++..| +|++++.++        ...+.+.+......++.++.+|..+++.....+..+
T Consensus        57 g~~VLDlGcG~G~~~~~la~-~v~~g-~V~gvDis~--------~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v  126 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLAD-IVDEG-IIYAVEYSA--------KPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKV  126 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHH-HTTTS-EEEEECCCH--------HHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCE
T ss_pred             CCEEEEeCCcCCHHHHHHHH-hccCC-eEEEEeCCH--------HHHHHHHHHhhccCCceEEEeeccCccccccccceE
Confidence            4688888865 444445544 34445 899999987        554444332222347899999999998777667778


Q ss_pred             CEEEEcc
Q 025660           84 TGVLHVA   90 (249)
Q Consensus        84 d~vih~a   90 (249)
                      |+|+|..
T Consensus       127 d~v~~~~  133 (209)
T d1nt2a_         127 DLIYQDI  133 (209)
T ss_dssp             EEEEECC
T ss_pred             EEEEecc
Confidence            8887753

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.69  E-value=0.22  Score=37.37  Aligned_cols=33  Identities=21%  Similarity=0.146  Sum_probs=29.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~   39 (249)
                      .+|+|+| +|.-|..++..|.+.| ++|+++.|++
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            4799998 7999999999999999 5999998876

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.48  E-value=0.36  Score=34.37  Aligned_cols=69  Identities=13%  Similarity=0.099  Sum_probs=41.6

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC-CCeEEEE-EcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHc--
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   81 (249)
                      .+|.|+| +|.+|+..++.|... +.+|+++ ++++        ++.+.+...........+       .++++++++  
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~--------~~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~   65 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSL--------EKAKAFATANNYPESTKI-------HGSYESLLEDP   65 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSH--------HHHHHHHHHTTCCTTCEE-------ESSHHHHHHCT
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCc--------cccccchhccccccceee-------cCcHHHhhhcc
Confidence            4799999 688999999998876 5688765 4554        444443322211111222       234666664  


Q ss_pred             CCCEEEEcc
Q 025660           82 GCTGVLHVA   90 (249)
Q Consensus        82 ~~d~vih~a   90 (249)
                      ++|+|+-+.
T Consensus        66 ~iD~v~I~t   74 (184)
T d1ydwa1          66 EIDALYVPL   74 (184)
T ss_dssp             TCCEEEECC
T ss_pred             ccceeeecc
Confidence            578888543

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.05  E-value=0.78  Score=34.29  Aligned_cols=34  Identities=18%  Similarity=0.275  Sum_probs=28.2

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHC-CCeEEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRS   38 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~   38 (249)
                      ++++|+|-| -|-+|+++++.|.++ |..|++++-.
T Consensus        31 ~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          31 KGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            568999998 688999999999875 8888877543

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=88.97  E-value=0.19  Score=39.86  Aligned_cols=30  Identities=27%  Similarity=0.285  Sum_probs=27.9

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (249)
                      |+|+| +|+-|..++.+|.+.|++|.++-+-
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            78898 8999999999999999999999884

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=88.81  E-value=1  Score=31.67  Aligned_cols=76  Identities=9%  Similarity=0.124  Sum_probs=45.8

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEc-----------CCCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA-----------DLSH   72 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------Dl~~   72 (249)
                      |++|.|-| -|-||+.+++.|.+++ .+|+++.-..      .......+.....     ..+..           .+.-
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~------~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~v   68 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTR------PDFEARMALKKGY-----DLYVAIPERVKLFEKAGIEV   68 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESS------CSHHHHHHHHTTC-----CEEESSGGGHHHHHHTTCCC
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCC------cHHHHHHHHhcCC-----ceEecccccceeecccCccc
Confidence            45899998 7999999999998886 4776654332      1122222222110     11111           1222


Q ss_pred             hhhHHHHHcCCCEEEEcccc
Q 025660           73 PDGFDAAIAGCTGVLHVATP   92 (249)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~   92 (249)
                      ...+..+.+++|+|+-|-|.
T Consensus        69 ~g~~~~~~~~vDvViEcTG~   88 (171)
T d1cf2o1          69 AGTVDDMLDEADIVIDCTPE   88 (171)
T ss_dssp             CEEHHHHHHTCSEEEECCST
T ss_pred             CCChhHhhcCCCEEEEccCC
Confidence            23566667789999999886

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=88.30  E-value=0.15  Score=38.97  Aligned_cols=37  Identities=22%  Similarity=0.328  Sum_probs=31.5

Q ss_pred             CCCCeEEEeccchhhHHH-----HHHHHHHCCCeEEEEEcCC
Q 025660            3 EGKGRVCVTGGTGFIASW-----LIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         3 ~~~~~vlItGatG~iG~~-----l~~~L~~~g~~V~~~~r~~   39 (249)
                      ..+.+|+|+.|-|++|+.     |+..|.++|++|.+++-++
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp   58 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP   58 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            456788888889999995     5688889999999999997

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.06  E-value=0.24  Score=38.50  Aligned_cols=32  Identities=31%  Similarity=0.448  Sum_probs=29.3

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .|+|+| +|+-|..++.+|.+.|.+|+++.+.+
T Consensus         9 dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVG-AGFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            589998 79999999999999999999998865

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=87.77  E-value=0.18  Score=38.30  Aligned_cols=34  Identities=21%  Similarity=0.176  Sum_probs=28.8

Q ss_pred             CCeEEEeccchhhHH-----HHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIAS-----WLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |++|.|+| -|++|+     .|+..|.++|++|.++|.++
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            46899998 888998     45668889999999999987

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.54  E-value=0.28  Score=36.44  Aligned_cols=32  Identities=19%  Similarity=0.156  Sum_probs=29.1

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      -|+|+| +|..|...+..|.++|++|+++.++.
T Consensus         4 DViIIG-aG~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIG-GGPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            489998 78999999999999999999999875

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.43  E-value=0.27  Score=36.15  Aligned_cols=33  Identities=24%  Similarity=0.380  Sum_probs=28.9

Q ss_pred             CeEEEeccchhhHHHHHHHHHHC--CCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~   39 (249)
                      ++|.|+| +|--|...+..|.+.  |++|+++.+.+
T Consensus         2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            4899998 799999999999765  78999998875

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.41  E-value=0.36  Score=37.47  Aligned_cols=33  Identities=24%  Similarity=0.262  Sum_probs=23.1

Q ss_pred             CeEEEec-cchhh---HHHHHHHHHHCCCeEEEEEcC
Q 025660            6 GRVCVTG-GTGFI---ASWLIMRLLDHGYSVTTTVRS   38 (249)
Q Consensus         6 ~~vlItG-atG~i---G~~l~~~L~~~g~~V~~~~r~   38 (249)
                      |||||++ |||+-   ..+|+++|.++||+|+.++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            4676665 34422   346889999999999887654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=87.04  E-value=0.31  Score=37.00  Aligned_cols=33  Identities=21%  Similarity=0.137  Sum_probs=29.6

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEc
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR   37 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   37 (249)
                      ++++|+|.| -|-+|+++++.|.+.|.+|++++-
T Consensus        35 ~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          35 VGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            568999999 799999999999999999988754

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.86  E-value=4  Score=29.21  Aligned_cols=91  Identities=13%  Similarity=0.088  Sum_probs=59.3

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcC--------------
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD--------------   69 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~D--------------   69 (249)
                      +|.|.| -|.-|..++.+|.+.+.   +.++++.+.        +   .|...+.   ...+..++              
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~--------~---~L~~~~~---~~ki~iG~~~~~g~G~gg~p~~   67 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDA--------Q---ALKNIAA---RTVLQLGPGVTKGLGAGANPEV   67 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBT--------G---GGSSCSC---SEEEECCHHHHTTBCCCSCHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcH--------H---HHhcCCc---cceeccccccccCCCCCCChHH
Confidence            477887 67799999999999874   556665554        1   2221111   12222221              


Q ss_pred             -----CCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC
Q 025660           70 -----LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG  123 (249)
Q Consensus        70 -----l~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~  123 (249)
                           ..+.+.+.+.+++.|.|+-+||....           +...++.-+++.+++.+
T Consensus        68 g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGG-----------TGtgaapviA~~ake~g  115 (198)
T d1ofua1          68 GRQAALEDRERISEVLEGADMVFITTGMGGG-----------TGTGAAPIIAEVAKEMG  115 (198)
T ss_dssp             HHHHHHHTHHHHHHHHTTCSEEEEEEETTSS-----------HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEecCCCC-----------ccccHHHHHHHHHHHcC
Confidence                 12345678888899999999998765           22455666888888877

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.57  E-value=0.18  Score=36.18  Aligned_cols=38  Identities=16%  Similarity=0.127  Sum_probs=32.6

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |....++|+|+| +|..|...+..|.+.|.+|+++.+..
T Consensus         1 m~~~~~~VvIIG-gGpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           1 LETHNTRLCIVG-SGPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             CEEEEEEEEEEC-CSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             CCcccceEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeec
Confidence            556667899998 78899999999999999999998654

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.42  E-value=0.52  Score=34.97  Aligned_cols=79  Identities=14%  Similarity=0.090  Sum_probs=55.5

Q ss_pred             CCCeEEEeccc-hhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGGT-GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+.+||=.|++ |..-++|++ ++..+..|++++.++        ...+.+.+.......+..+..|..+++.+......
T Consensus        73 pG~~VLDlGaGsG~~t~~la~-~VG~~G~V~aVD~s~--------~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~  143 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSD-IVGWEGKIFGIEFSP--------RVLRELVPIVEERRNIVPILGDATKPEEYRALVPK  143 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHH-HHCTTSEEEEEESCH--------HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCC
T ss_pred             CCCEEEEeccCCCHHHHHHHH-HhCCCCEEEEEeCcH--------HHHHHHHHHHHhcCCceEEEEECCCcccccccccc
Confidence            35688877754 666666666 445567999999987        55555443333345688899999999988766677


Q ss_pred             CCEEEEccc
Q 025660           83 CTGVLHVAT   91 (249)
Q Consensus        83 ~d~vih~a~   91 (249)
                      +|.|++...
T Consensus       144 vD~i~~d~~  152 (227)
T d1g8aa_         144 VDVIFEDVA  152 (227)
T ss_dssp             EEEEEECCC
T ss_pred             eEEEEEEcc
Confidence            888886543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.30  E-value=0.34  Score=37.28  Aligned_cols=31  Identities=23%  Similarity=0.196  Sum_probs=28.7

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+| +|..|...+.+|.++|.+|+++.+.+
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            89998 79999999999999999999998865

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=85.62  E-value=0.36  Score=33.41  Aligned_cols=31  Identities=16%  Similarity=0.062  Sum_probs=26.2

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ||.++| .|..|+.++++|++.|+.+ +..|..
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~   32 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTF   32 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSST
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCH
Confidence            688998 7999999999999988876 466665

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=85.40  E-value=0.41  Score=33.38  Aligned_cols=37  Identities=22%  Similarity=0.320  Sum_probs=25.0

Q ss_pred             CCCCCCeEEEeccchhhHHHHHHHHHH-CC-CeEEEE-EcCC
Q 025660            1 MEEGKGRVCVTGGTGFIASWLIMRLLD-HG-YSVTTT-VRSE   39 (249)
Q Consensus         1 m~~~~~~vlItGatG~iG~~l~~~L~~-~g-~~V~~~-~r~~   39 (249)
                      |+ ++.++.|.| +|.||+.+...+++ .. .+++++ +|++
T Consensus         1 M~-kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~   40 (157)
T d1nvmb1           1 MN-QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDA   40 (157)
T ss_dssp             CC-SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCT
T ss_pred             CC-CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecch
Confidence            54 556899999 89999976544444 33 477666 4554

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.40  E-value=4  Score=29.22  Aligned_cols=91  Identities=14%  Similarity=0.113  Sum_probs=58.7

Q ss_pred             eEEEeccchhhHHHHHHHHHHCCC---eEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcC--------------
Q 025660            7 RVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD--------------   69 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~D--------------   69 (249)
                      +|-|.| -|.-|..++.+|.+++.   +.+++..+.        +.   |.....   ...+..+.              
T Consensus         3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD~--------~~---L~~~~~---~~ki~iG~~~t~G~Gagg~p~~   67 (198)
T d1rq2a1           3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTDA--------QA---LLMSDA---DVKLDVGRDSTRGLGAGADPEV   67 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESCH--------HH---HHHCCC---SEEEECCTTTC-----CCCHHH
T ss_pred             eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcchH--------HH---HhcCCc---chhhccccccccCCCcCcChhh
Confidence            355776 56679999999999874   455555443        11   221111   22333331              


Q ss_pred             -----CCChhhHHHHHcCCCEEEEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcC
Q 025660           70 -----LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG  123 (249)
Q Consensus        70 -----l~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~  123 (249)
                           ..+.+.+.+.+++.|.|+-+||....           +...++.-+++.+++.+
T Consensus        68 g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGg-----------TGtGaaPviA~iake~g  115 (198)
T d1rq2a1          68 GRKAAEDAKDEIEELLRGADMVFVTAGEGGG-----------TGTGGAPVVASIARKLG  115 (198)
T ss_dssp             HHHHHHHTHHHHHHHHTTCSEEEEEEETTSS-----------HHHHHHHHHHHHHHHHT
T ss_pred             hHhhHHHHHHHHHHHhcCCCEEEEEEecCCC-----------CCcchHHHHHHHHHHcC
Confidence                 12346788888899999999998765           23456667888888887

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.34  E-value=0.35  Score=35.52  Aligned_cols=35  Identities=20%  Similarity=0.156  Sum_probs=29.4

Q ss_pred             CCeEEEeccchhhHH-----HHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIAS-----WLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ++.|.|+|+-|++|+     .|+..|.++|.+|.+++-+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            457899999999998     56678889999999999664

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.34  E-value=0.066  Score=37.89  Aligned_cols=74  Identities=20%  Similarity=0.252  Sum_probs=41.5

Q ss_pred             CeEEEeccchhhHHHHHH-HHHHC-----CCeEEEEEcCCCCcccCCchhhhhhccCCC--CCCCeEEEEcCCCChhhHH
Q 025660            6 GRVCVTGGTGFIASWLIM-RLLDH-----GYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFD   77 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~-~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dl~~~~~~~   77 (249)
                      |||.|+||++ +|..++- .|+..     ..++.++|.++        ++.....+...  ......+...     .+..
T Consensus         1 mKIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~--------~k~~~~~d~~~~~~~~~~~~~~t-----~~~~   66 (162)
T d1up7a1           1 MRIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDE--------EKQKIVVDFVKRLVKDRFKVLIS-----DTFE   66 (162)
T ss_dssp             CEEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCH--------HHHHHHHHHHHHHHTTSSEEEEC-----SSHH
T ss_pred             CEEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCc--------HHHHHHHHHHHhhhccCceEEEe-----cCcc
Confidence            4799999754 6665553 33321     35899999987        33332211100  0011222221     2234


Q ss_pred             HHHcCCCEEEEccccC
Q 025660           78 AAIAGCTGVLHVATPV   93 (249)
Q Consensus        78 ~~~~~~d~vih~a~~~   93 (249)
                      +.++++|+||.+|+..
T Consensus        67 ~~l~~aDvVVita~~~   82 (162)
T d1up7a1          67 GAVVDAKYVIFQFRPG   82 (162)
T ss_dssp             HHHTTCSEEEECCCTT
T ss_pred             cccCCCCEEEEecccC
Confidence            6778999999999864

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.97  E-value=0.69  Score=31.94  Aligned_cols=34  Identities=29%  Similarity=0.222  Sum_probs=28.7

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-eEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (249)
                      +++|+|+| +|.+|-..+..+++.|. .|+++.|+.
T Consensus        45 ~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            46899998 79999999999999987 577877765

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.96  E-value=0.72  Score=34.20  Aligned_cols=78  Identities=12%  Similarity=0.092  Sum_probs=53.6

Q ss_pred             CCCeEEEecc-chhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHHcC
Q 025660            4 GKGRVCVTGG-TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (249)
Q Consensus         4 ~~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   82 (249)
                      .+.+||=.|+ +|+.-+++++. .. +..|++++.++        ...+.+.+......++.++.+|..+++.+......
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~--------~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~  143 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAP--------RIMRELLDACAERENIIPILGDANKPQEYANIVEK  143 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCH--------HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCC
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcH--------HHHHHHHHHHhhhcccceEEEeeccCcccccccce
Confidence            3568888885 47777777764 33 35999999988        55555544444456788999999999877655555


Q ss_pred             CCEEEEccc
Q 025660           83 CTGVLHVAT   91 (249)
Q Consensus        83 ~d~vih~a~   91 (249)
                      +|.+++...
T Consensus       144 v~~i~~~~~  152 (230)
T d1g8sa_         144 VDVIYEDVA  152 (230)
T ss_dssp             EEEEEECCC
T ss_pred             eEEeecccc
Confidence            666665433

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=84.94  E-value=1.5  Score=29.41  Aligned_cols=34  Identities=21%  Similarity=0.258  Sum_probs=29.1

Q ss_pred             CCeEEEeccc---hhhHHHHHHHHHHCCCeEEEEEcC
Q 025660            5 KGRVCVTGGT---GFIASWLIMRLLDHGYSVTTTVRS   38 (249)
Q Consensus         5 ~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~   38 (249)
                      .++|.|+|||   +-.|..+.+.|.+.|+++..+--+
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            4689999999   679999999999999998877543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.74  E-value=0.39  Score=30.94  Aligned_cols=35  Identities=17%  Similarity=-0.062  Sum_probs=29.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .+|+|+|.| +|.-|..++..|.+...+|+...|+.
T Consensus        31 ~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          31 VGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             TTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             CCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecC
Confidence            468999999 77899999999988877777676665

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.73  E-value=0.34  Score=35.54  Aligned_cols=35  Identities=23%  Similarity=0.149  Sum_probs=29.9

Q ss_pred             CCeEEEeccchhhHH-----HHHHHHHHCCCeEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIAS-----WLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~r~~   39 (249)
                      ||.|.|+++-|++|+     +|+..|.++|++|.+++-+.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            467999999999998     56778888999999998875

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.41  E-value=0.36  Score=36.11  Aligned_cols=33  Identities=21%  Similarity=0.224  Sum_probs=29.7

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      .-|+|+| +|--|...+..|.++|++|+++.+.+
T Consensus         5 ~DViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~   37 (253)
T d2gqfa1           5 SENIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGK   37 (253)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            4599998 78899999999999999999999876

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=84.40  E-value=0.42  Score=37.81  Aligned_cols=30  Identities=20%  Similarity=0.296  Sum_probs=27.5

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (249)
                      ++|+| +|+-|..++.+|.+.|++|+++-+.
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            78888 8899999999999999999999874

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.35  E-value=0.77  Score=28.66  Aligned_cols=30  Identities=23%  Similarity=0.220  Sum_probs=25.1

Q ss_pred             CeEEEeccchhhHHHHHHHHHHCCCeEEEEE
Q 025660            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTV   36 (249)
Q Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~   36 (249)
                      |||||+| +|.=-.+|+++|.+..+++++.-
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~p   30 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYP   30 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEec
Confidence            4899999 66678899999999899988763

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=84.24  E-value=0.3  Score=35.39  Aligned_cols=31  Identities=23%  Similarity=0.207  Sum_probs=25.8

Q ss_pred             CeEEEeccchhhHH-----HHHHHHHHCCCeEEEEE
Q 025660            6 GRVCVTGGTGFIAS-----WLIMRLLDHGYSVTTTV   36 (249)
Q Consensus         6 ~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~   36 (249)
                      |+++|||-..++|+     .|+..|.++|++|..++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            68999995448998     67788889999998886

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=84.13  E-value=0.52  Score=37.65  Aligned_cols=32  Identities=22%  Similarity=0.116  Sum_probs=24.4

Q ss_pred             CeEEEecc------chhhH---HHHHHHHHHCCCeEEEEEc
Q 025660            6 GRVCVTGG------TGFIA---SWLIMRLLDHGYSVTTTVR   37 (249)
Q Consensus         6 ~~vlItGa------tG~iG---~~l~~~L~~~g~~V~~~~r   37 (249)
                      ||||+++.      +|++|   .+|+++|.+.||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            46777654      35665   5679999999999998874

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.14  E-value=0.67  Score=33.47  Aligned_cols=31  Identities=19%  Similarity=-0.009  Sum_probs=27.8

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+| +|..|...+.++.+.|.+|.++.++.
T Consensus         5 vvVIG-~G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIG-GGSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCEEEEEeccC
Confidence            78998 59999999999999999999998753

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=83.13  E-value=0.56  Score=36.73  Aligned_cols=31  Identities=29%  Similarity=0.387  Sum_probs=27.8

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+| +|.-|.-++.+|.+.|++|+++-+..
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEaG~   37 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDIGE   37 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEecCC
Confidence            78898 89999999999999999999997643

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=83.06  E-value=0.49  Score=36.74  Aligned_cols=31  Identities=16%  Similarity=0.101  Sum_probs=27.4

Q ss_pred             EEEeccchhhHHHHHHHHH-----HCCCeEEEEEcCC
Q 025660            8 VCVTGGTGFIASWLIMRLL-----DHGYSVTTTVRSE   39 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~-----~~g~~V~~~~r~~   39 (249)
                      |+|+| .|..|..++..|.     ++|++|+++.|++
T Consensus        10 V~IvG-aG~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVG-AGPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            88998 7999999999996     4699999999876

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=82.51  E-value=0.67  Score=35.11  Aligned_cols=32  Identities=19%  Similarity=0.154  Sum_probs=28.5

Q ss_pred             eEEEeccchhhHHHHHHHHHHC-CCeEEEEEcCC
Q 025660            7 RVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSE   39 (249)
Q Consensus         7 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~   39 (249)
                      -|+|+| +|.-|...+.+|.++ |++|+++.+++
T Consensus        35 DViVIG-aGpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVG-AGSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEEC-CCHHHHHHHHHHHHccCCeEEEEecCC
Confidence            389999 599999999999875 99999999875

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=82.07  E-value=0.61  Score=36.10  Aligned_cols=31  Identities=19%  Similarity=0.158  Sum_probs=28.5

Q ss_pred             EEEeccchhhHHHHHHHHHHCCCeEEEEEcCC
Q 025660            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (249)
Q Consensus         8 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (249)
                      |+|+| +|..|...+.+|.++|.+|+++.+.+
T Consensus        26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEEC-SSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            89998 78899999999999999999998865

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.90  E-value=0.73  Score=37.75  Aligned_cols=23  Identities=35%  Similarity=0.371  Sum_probs=19.1

Q ss_pred             chhhH---HHHHHHHHHCCCeEEEEE
Q 025660           14 TGFIA---SWLIMRLLDHGYSVTTTV   36 (249)
Q Consensus        14 tG~iG---~~l~~~L~~~g~~V~~~~   36 (249)
                      +|++|   .+|+++|.++||+|++++
T Consensus        16 ~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_          16 TGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             SSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             cCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            37766   578999999999999885

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.33  E-value=0.53  Score=34.39  Aligned_cols=34  Identities=18%  Similarity=0.115  Sum_probs=29.5

Q ss_pred             CCeEEEeccchhhHHHHHHHHHHCCC-------eEEEEEcCC
Q 025660            5 KGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSE   39 (249)
Q Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~   39 (249)
                      ..+|+|+| +|.-|.+.+.+|.++||       +|+++.+.+
T Consensus         2 p~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           2 PYYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CcEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            35899998 89999999999999884       799998865

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=81.06  E-value=0.88  Score=31.96  Aligned_cols=75  Identities=21%  Similarity=0.187  Sum_probs=45.0

Q ss_pred             CCCeEEEeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC---C-----------CCCCCeEEEEcC
Q 025660            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL---P-----------GASERLRIFHAD   69 (249)
Q Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~---~-----------~~~~~~~~~~~D   69 (249)
                      .+++||..| || .|. .+..|+++|++|++++.++        .-.+..++.   .           .......++.+|
T Consensus        20 ~~~rvLd~G-CG-~G~-~a~~la~~G~~V~gvD~S~--------~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   88 (201)
T d1pjza_          20 PGARVLVPL-CG-KSQ-DMSWLSGQGYHVVGAELSE--------AAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD   88 (201)
T ss_dssp             TTCEEEETT-TC-CSH-HHHHHHHHCCEEEEEEECH--------HHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC
T ss_pred             CCCEEEEec-Cc-CCH-HHHHHHHcCCceEeecccH--------HHHHHHHHHhccccchhhhhhhhhccccccceeccc
Confidence            457899999 44 454 4557788899999999986        332222111   0           012345788888


Q ss_pred             CCChhhHHHHHcCCCEEEEccc
Q 025660           70 LSHPDGFDAAIAGCTGVLHVAT   91 (249)
Q Consensus        70 l~~~~~~~~~~~~~d~vih~a~   91 (249)
                      ..+....  .....|.|+-...
T Consensus        89 ~~~l~~~--~~~~~D~i~~~~~  108 (201)
T d1pjza_          89 FFALTAR--DIGHCAAFYDRAA  108 (201)
T ss_dssp             CSSSTHH--HHHSEEEEEEESC
T ss_pred             ccccccc--cccceeEEEEEee
Confidence            8775532  2234676654333

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=80.94  E-value=0.37  Score=34.81  Aligned_cols=75  Identities=16%  Similarity=0.168  Sum_probs=50.1

Q ss_pred             EeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhh-ccCCCCCCCeEEEEcCCCChhhHHHHH--cCCCEE
Q 025660           10 VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI--AGCTGV   86 (249)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~v   86 (249)
                      +|-|+|+.-.++++.+ . +..|+++++++        +..+.. ..+.....++.++.++..+...+..-.  ..+|.|
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~--------~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgI   99 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDS--------EVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGI   99 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCH--------HHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechH--------HHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCccee
Confidence            4566677777777765 3 56899999998        443332 222223457999999998876654443  468998


Q ss_pred             EEccccCC
Q 025660           87 LHVATPVD   94 (249)
Q Consensus        87 ih~a~~~~   94 (249)
                      +.-.|...
T Consensus       100 l~DlGvSs  107 (192)
T d1m6ya2         100 LMDLGVST  107 (192)
T ss_dssp             EEECSCCH
T ss_pred             eeccchhH
Confidence            87777643

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=80.78  E-value=0.64  Score=36.76  Aligned_cols=94  Identities=19%  Similarity=0.165  Sum_probs=55.0

Q ss_pred             EeccchhhHHHHHHHHHHCCCeEEEEEcCCCCcccCCchhhhhhccC--CCCCCCeEEEEcCCCChh-hHHHHHcCCCEE
Q 025660           10 VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL--PGASERLRIFHADLSHPD-GFDAAIAGCTGV   86 (249)
Q Consensus        10 ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dl~~~~-~~~~~~~~~d~v   86 (249)
                      +-+|+|.+|..|+    +++.+|+++..++        +..+.....  .....+++++.+|+.+.- ........+|+|
T Consensus       219 LycG~G~fsl~La----~~~~~V~gvE~~~--------~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~v  286 (358)
T d1uwva2         219 LFCGMGNFTLPLA----TQAASVVGVEGVP--------ALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV  286 (358)
T ss_dssp             ESCTTTTTHHHHH----TTSSEEEEEESCH--------HHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEE
T ss_pred             ecccccccchhcc----ccccEEEeccCcH--------HHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceE
Confidence            5567899988765    4678999998876        333322111  112347889999887642 222222357887


Q ss_pred             EEccccCCCCCCChHHHhhhhHHhHHHHHHHHHHhcCCcceEEEEcc
Q 025660           87 LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (249)
Q Consensus        87 ih~a~~~~~~~~~~~~~~~~~n~~~t~~l~~~~~~~~~~~~~v~~SS  133 (249)
                      |----                 -.|...+++.+.+.+ .++|||+|-
T Consensus       287 ilDPP-----------------R~G~~~~~~~l~~~~-~~~ivYVSC  315 (358)
T d1uwva2         287 LLDPA-----------------RAGAAGVMQQIIKLE-PIRIVYVSC  315 (358)
T ss_dssp             EECCC-----------------TTCCHHHHHHHHHHC-CSEEEEEES
T ss_pred             EeCCC-----------------CccHHHHHHHHHHcC-CCEEEEEeC
Confidence            73211                 111123445555556 789999994

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=80.14  E-value=0.78  Score=31.88  Aligned_cols=99  Identities=14%  Similarity=0.040  Sum_probs=51.6

Q ss_pred             CeEEEeccchhhHHH-HHHHHHHCC-CeEEEEEcCCCCcccCCchhhhhhccCCCCCCCeEEEEcCCCChhhHHHHH-cC
Q 025660            6 GRVCVTGGTGFIASW-LIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI-AG   82 (249)
Q Consensus         6 ~~vlItGatG~iG~~-l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~   82 (249)
                      ++|.|+| +|.+|+. ....|.+.+ .++.+.++++        ++...+.+...    +.....|.   ++   ++ ++
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~--------~~~~~~~~~~~----~~~~~~~~---~~---ll~~~   62 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNP--------KVLGTLATRYR----VSATCTDY---RD---VLQYG   62 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCH--------HHHHHHHHHTT----CCCCCSST---TG---GGGGC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCH--------HHHHHHHHhcc----cccccccH---HH---hcccc
Confidence            4799998 6778865 456665553 4777666665        44444433211    11112222   22   22 36


Q ss_pred             CCEEEEccccCCC---------CCCC-hHHHhhhhHHhHHHHHHHHHHhcC
Q 025660           83 CTGVLHVATPVDF---------EDKE-PEEVITQRAINGTLGILKSCLKSG  123 (249)
Q Consensus        83 ~d~vih~a~~~~~---------~~~~-~~~~~~~~n~~~t~~l~~~~~~~~  123 (249)
                      +|+|+-+......         .... ..+.=+..|..-.+.|++++++.+
T Consensus        63 iD~V~I~tp~~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~  113 (167)
T d1xeaa1          63 VDAVMIHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHH  113 (167)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTT
T ss_pred             cceecccccccccccccccccccccccccCCCCcCCHHHHHHHHHHHHHcC
Confidence            8888755433211         0000 000112345667888999888877