Citrus Sinensis ID: 025678

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MGIQTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEASTIFLLRSN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEEEcHHHHHHHHcccccccccccHHHHHHHccccHHcccccccccccccccccccccccccccHHHcHHcHHHHHHHHHHccccccccccccccccccccHccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEccc
Coil and Loop (DISEMBL)
mgiqtmgsqsngqqshlqpslvrqnswYSLTLNEVENQlgnlgkplgsmnlDELLKSVWSteandstgidiensstassSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGqemkshqreptlgeltLEDFLVQAGlfaeasvspmdldtVGVVTMqsfpekmslspsssigtltprrkrddnAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEASTIFLLRSN
Flexible Loop (DISEMBL)
MGIqtmgsqsngqqshlqpSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDstgidiensstassslQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQsfpekmslspsssigtltprrkrddnafeksierrlrrkiknresaarsrarkqayhnelvskvsrleeenlklkkekeastifllrsn
Low Complexity Region (SEG)
MGIQTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRleeenlklkkekeASTIFLLRSN
Disordered region (IsUnstruct)
************************NSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW*****************************************VW************************GELTLEDFLVQAGLFAEASVSPMDLDTVGVVT*******************************************************************************************
Disordered Region (DISOPRED)
*************************************************************************************************************************************FLVQAGLFAEASVSPM******************************************************************YHNELVSKVSRLEEENL*****K****IFLL***
Disordered Region (DISEMBL)
*******************SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIEN***********ASLTLARALSGKTVEQVWNEI*****************EPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPE***********TLTPRRKRDDNAFEKSIERRLRRKIK*************AYHNELVSKVSRLEEENLKLKKEKEASTIFLLRSN
Disordered Region (DISPRO)
**********************RQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWST*************************LTLARALSGKTVEQVWNEIQQGQ****************LGELTLEDFLVQAGLFAE*************************************************************SAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEASTIFLLR**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGIQTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYxxxxxxxxxxxxxxxxxxxxxKEASTIFLLRSN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	249	2.2.26 [Sep-21-2011]
Q9LES3	297	ABSCISIC ACID-INSENSITIVE	yes	no	0.895	0.750	0.456	5e-47
Q9C5Q2	262	ABSCISIC ACID-INSENSITIVE	no	no	0.887	0.843	0.442	2e-41
Q8RYD6	331	ABSCISIC ACID-INSENSITIVE	no	no	0.847	0.637	0.395	3e-22
Q9M7Q5	392	ABSCISIC ACID-INSENSITIVE	no	no	0.530	0.336	0.421	2e-21
Q9M7Q2	431	ABSCISIC ACID-INSENSITIVE	no	no	0.493	0.285	0.407	4e-19
Q9M7Q3	454	ABSCISIC ACID-INSENSITIVE	no	no	0.493	0.270	0.372	3e-18
Q9M7Q4	416	ABSCISIC ACID-INSENSITIVE	no	no	0.481	0.288	0.433	3e-17
Q9SJN0	442	Protein ABSCISIC ACID-INS	no	no	0.489	0.276	0.323	5e-14
Q6ZDF3	318	bZIP transcription factor	no	no	0.381	0.298	0.417	5e-14
P42777	270	G-box-binding factor 4 OS	no	no	0.686	0.633	0.357	4e-13

>sp|Q9LES3|AI5L2_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1

 Score =  187 bits (475), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/265 (45%), Positives = 153/265 (57%), Gaps = 42/265 (15%)

Query: 20  SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASS 79
           SL RQ+S YSLTL+EV+N LG+ GK LGSMNLDELLKSV S EAN  + + +   + A  
Sbjct: 15  SLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQPSSMAVNGGAAAQE 74

Query: 80  SLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQAG 139
            L RQ SLTL R LS KTV++VW +IQ  Q K  G   +   ++PTLGE+TLED L++AG
Sbjct: 75  GLSRQGSLTLPRDLSKKTVDEVWKDIQ--QNKNGGSAHERRDKQPTLGEMTLEDLLLKAG 132

Query: 140 LFAEA------------------SVSPMDLDTVG----VVTMQSFPEKMSLSP------- 170
           +  E                   +    ++  VG       + S P+  +  P       
Sbjct: 133 VVTETIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWIQYHQLPSMPQPQAFMPYPVSDMQ 192

Query: 171 -----SSSIGTL----TPRRKR--DDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNE 219
                SS +G L    TP RKR       EK++ERR +R IKNRESAARSRARKQAY +E
Sbjct: 193 AMVSQSSLMGGLSDTQTPGRKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQAYTHE 252

Query: 220 LVSKVSRLEEENLKLKKEKEASTIF 244
           L  KVSRLEEEN +L+K+KE   I 
Sbjct: 253 LEIKVSRLEEENERLRKQKEVEKIL 277

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5Q2|AI5L3_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/260 (44%), Positives = 146/260 (56%), Gaps = 39/260 (15%)

Query: 6   MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
           MGS     +  +  SL RQNS YSL L+EV+  LG+ GKPLGSMNLDELLK+V       
Sbjct: 1   MGSIRGNIEEPISQSLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTVLPP---- 56

Query: 66  STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
                      A   L RQ SLTL R LS KTV++VW +IQQ  K   G    +  ++PT
Sbjct: 57  -----------AEEGLVRQGSLTLPRDLSKKTVDEVWRDIQQ-DKNGNGTSTTTTHKQPT 104

Query: 126 LGELTLEDFLVQAGLFAEASVSPMDLDTVGVVT----------------MQSFP----EK 165
           LGE+TLED L++AG+  E +V P + + V + +                  ++P    + 
Sbjct: 105 LGEITLEDLLLRAGVVTE-TVVPQE-NVVNIASNGQWVEYHHQPQQQQGFMTYPVCEMQD 162

Query: 166 MSLSPSSSIGTLTPRRKR-DDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKV 224
           M +    S     P RKR      EK++ERR +R IKNRESAARSRARKQAY +EL  KV
Sbjct: 163 MVMMGGLSDTPQAPGRKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKV 222

Query: 225 SRLEEENLKLKKEKEASTIF 244
           SRLEEEN KL++ KE   I 
Sbjct: 223 SRLEEENEKLRRLKEVEKIL 242

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RYD6|AI5L1_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1

 Score =  105 bits (262), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/258 (39%), Positives = 137/258 (53%), Gaps = 47/258 (18%)

Query: 23  RQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWST-EANDSTGIDIENSSTASSSL 81
           RQNS  SLTL+E++ + G   K  G+MN+DE L ++W+T E ND+ G    N     + L
Sbjct: 37  RQNSILSLTLDEIQMKSG---KSFGAMNMDEFLANLWTTVEENDNEGGGAHNDGEKPAVL 93

Query: 82  QRQASLTLARALSGKTVEQVWNEIQQGQKKR-----YGQEMKSH-QREPTLGELTLEDFL 135
            RQ SL+L   L  KTV++VW EIQ G ++       GQ    + +R+ TLGE+TLEDFL
Sbjct: 94  PRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDFL 153

Query: 136 VQAGLFAEASVSPMDLDT----------VGV-------------VTMQSFPEKMSLSPSS 172
           V+AG+  E   + M + +          VG+             V  ++ P    L  SS
Sbjct: 154 VKAGVVQEPLKTTMRMSSSDFGYNPEFGVGLHCQNQNNYGDNRSVYSENRPFYSVLGESS 213

Query: 173 SIGTLTPR-------------RKR-DDNAFEKSIERRLRRKIKNRESAARSRARKQAYHN 218
           S  T   R             +KR  D   E  +ERR RR IKNRESAARSRAR+QAY  
Sbjct: 214 SCMTGNGRSNQYLTGLDAFRIKKRIIDGPPEILMERRQRRMIKNRESAARSRARRQAYTV 273

Query: 219 ELVSKVSRLEEENLKLKK 236
           EL  +++ L EEN KLK+
Sbjct: 274 ELELELNNLTEENTKLKE 291

Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q5|AI5L4_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1

 Score =  102 bits (254), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 86/147 (58%), Gaps = 15/147 (10%)

Query: 7   GSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDS 66
           G  S G +S     L RQ+S YSLT +E+++ LG  GK  GSMN+DELLK++W+ E  D+
Sbjct: 12  GDTSRGNESK---PLARQSSLYSLTFDELQSTLGEPGKDFGSMNMDELLKNIWTAE--DT 66

Query: 67  TGIDIENSSTAS----------SSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQE 116
                  SS A+          + LQRQ SLTL R LS KTV++VW  +   +       
Sbjct: 67  QAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLPRTLSQKTVDEVWKYLNSKEGSNGNTG 126

Query: 117 MKSHQREPTLGELTLEDFLVQAGLFAE 143
             + +R+ TLGE+TLEDFL++AG+  E
Sbjct: 127 TDALERQQTLGEMTLEDFLLRAGVVKE 153

Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q2|AI5L7_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1

 Score = 95.1 bits (235), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 80/140 (57%), Gaps = 17/140 (12%)

Query: 21  LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASS- 79
           L RQ+S YSLT +E++N LG  GK  GSMN+DELLKS+W+ E   +  +    ++TA + 
Sbjct: 34  LARQSSVYSLTFDELQNTLGGPGKDFGSMNMDELLKSIWTAEEAQAMAMTSAPAATAVAQ 93

Query: 80  ----------SLQRQASLTLARALSGKTVEQVWNEI--QQGQKKRYGQEMKSHQREP--- 124
                     +LQRQ SLTL R +S KTV++VW  +  + G  +            P   
Sbjct: 94  PGAGIPPPGGNLQRQGSLTLPRTISQKTVDEVWKCLITKDGNMEGSSGGGGESNVPPGRQ 153

Query: 125 -TLGELTLEDFLVQAGLFAE 143
            TLGE+TLE+FL +AG+  E
Sbjct: 154 QTLGEMTLEEFLFRAGVVRE 173

Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q3|AI5L6_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 38/161 (23%)

Query: 21  LVRQNSWYSLTLNEVENQLGN-LGKPLGSMNLDELLKSVWSTE------ANDSTGIDIEN 73
           L RQNS +SLT +E +N  G  +GK  GSMN+DELLK++W+ E       N+++  +I N
Sbjct: 27  LTRQNSVFSLTFDEFQNSWGGGIGKDFGSMNMDELLKNIWTAEESHSMMGNNTSYTNISN 86

Query: 74  SSTASS---------------------------SLQRQASLTLARALSGKTVEQVWNEIQ 106
            ++ ++                           SLQRQ SLTL R +S K V+ VW E+ 
Sbjct: 87  GNSGNTVINGGGNNIGGLAVGVGGESGGFFTGGSLQRQGSLTLPRTISQKRVDDVWKELM 146

Query: 107 Q----GQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAE 143
           +    G     G      QR+ TLGE+TLE+FLV+AG+  E
Sbjct: 147 KEDDIGNGVVNGGTSGIPQRQQTLGEMTLEEFLVRAGVVRE 187

Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q4|AI5L5_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 80/136 (58%), Gaps = 16/136 (11%)

Query: 21  LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWS---TEANDSTGIDIENSSTA 77
           L RQ S YSLT +E ++   ++GK  GSMN+DELLK++WS   T+A  S  + +      
Sbjct: 21  LTRQGSIYSLTFDEFQS---SVGKDFGSMNMDELLKNIWSAEETQAMASGVVPVLGGGQE 77

Query: 78  SSSLQRQASLTLARALSGKTVEQVWNEIQQ-GQKKRYGQEM---------KSHQREPTLG 127
              LQRQ SLTL R LS KTV+QVW ++ + G     G  +            QR+ TLG
Sbjct: 78  GLQLQRQGSLTLPRTLSQKTVDQVWKDLSKVGSSGVGGSNLSQVAQAQSQSQSQRQQTLG 137

Query: 128 ELTLEDFLVQAGLFAE 143
           E+TLE+FLV+AG+  E
Sbjct: 138 EVTLEEFLVRAGVVRE 153

Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 85/198 (42%), Gaps = 76/198 (38%)

Query: 14  QSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWST------------ 61
           ++H   SL RQ+S YSLTL+E ++ L   GK  GSMN+DE L S+W+             
Sbjct: 30  ENHPFTSLGRQSSIYSLTLDEFQHALCENGKNFGSMNMDEFLVSIWNAEENNNNQQQAAA 89

Query: 62  -------------------------------------EANDSTGIDIENSSTASSSLQRQ 84
                                                +AN+  GI  E      SSL RQ
Sbjct: 90  AAGSHSVPANHNGFNNNNNNGGEGGVGVFSGGSRGNEDANNKRGIANE------SSLPRQ 143

Query: 85  ASLTLARALSGKTVEQVWNEIQQGQKK-------------------RYGQEMKSHQREPT 125
            SLTL   L  KTV++VW+EI +G                      + G E  +  R+PT
Sbjct: 144 GSLTLPAPLCRKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGGETAA--RQPT 201

Query: 126 LGELTLEDFLVQAGLFAE 143
            GE+TLEDFLV+AG+  E
Sbjct: 202 FGEMTLEDFLVKAGVVRE 219

Participates in ABA-regulated gene expression during seed development and subsequent vegetative stage by acting as the major mediator of ABA repression of growth. Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 and Em6 genes promoters. Can also trans-activate its own promoter, suggesting that it is autoregulated. Plays a role in sugar-mediated senescence.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZDF3|TRAB1_ORYSJ bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 8/103 (7%)

Query: 49  MNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQ- 107
           MN+DELL+S+W+ E + +       ++ A   LQRQ SLTL R LS KTV++VW ++++ 
Sbjct: 1   MNMDELLRSIWTAEESQAMASASAAAAAAEGGLQRQGSLTLPRTLSVKTVDEVWRDLERE 60

Query: 108 -------GQKKRYGQEMKSHQREPTLGELTLEDFLVQAGLFAE 143
                        G E +  +R+PTLGE+TLE+FLV+AG+  E
Sbjct: 61  ASPGAAAADGGGGGGEQQQPRRQPTLGEMTLEEFLVRAGVVRE 103

Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P42777|GBF4_ARATH G-box-binding factor 4 OS=Arabidopsis thaliana GN=GBF4 PE=1 SV=1

 Score = 75.5 bits (184), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 25/196 (12%)

Query: 66  STGIDIENSSTASSSLQRQASLTLARAL-------SGKTVEQVWNEIQQGQKKRYGQEMK 118
           + G  + + + AS S   + ++ + R++       +GK+V+ VW EI  G++K     MK
Sbjct: 48  AYGGGVNDYTFASDSKPFEMAIDVDRSIGDRNSVNNGKSVDDVWKEIVSGEQKTIM--MK 105

Query: 119 SHQREPTLGELTLEDFLVQAGLFAEAS------VSPMDLDTVGVVTMQSFPEKMSLS--- 169
             + E  +   TLEDFL +A +   AS      +    L+  G  T   FP +   S   
Sbjct: 106 EEEPEDIM---TLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTF-DFPMQRHSSFQM 161

Query: 170 PSSSIGTLTPRRKRDD---NAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSR 226
              S+G    R KR      A +K+  +R +R IKNRESAARSR RKQAY  EL +  ++
Sbjct: 162 VEGSMGGGVTRGKRGRVMMEAMDKAAAQRQKRMIKNRESAARSRERKQAYQVELETLAAK 221

Query: 227 LEEENLKLKKEKEAST 242
           LEEEN +L KE E ST
Sbjct: 222 LEEENEQLLKEIEEST 237

Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
224054496	261	predicted protein [Populus trichocarpa]	0.895	0.854	0.755	1e-88
255549144	238	DNA binding protein, putative [Ricinus c	0.919	0.962	0.75	1e-86
224104595	264	predicted protein [Populus trichocarpa]	0.903	0.852	0.743	2e-84
356550905	271	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.931	0.856	0.719	8e-84
225435989	248	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.919	0.923	0.637	7e-80
444300784	264	bZIP transcription factor family protein	0.967	0.912	0.654	3e-79
356574569	274	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.931	0.846	0.677	2e-77
147836035	262	hypothetical protein VITISV_032518 [Viti	0.903	0.858	0.636	9e-77
449452690	270	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.955	0.881	0.650	4e-76
449525480	270	PREDICTED: LOW QUALITY PROTEIN: ABSCISIC	0.955	0.881	0.646	1e-75

>gi|224054496|ref|XP_002298289.1| predicted protein [Populus trichocarpa] gi|222845547|gb|EEE83094.1| predicted protein [Populus trichocarpa]

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 176/233 (75%), Positives = 192/233 (82%), Gaps = 10/233 (4%)

Query: 6   MGSQSNGQQSHLQPS-LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAN 64
           M SQSNGQQSH+QP  L+RQ SWY+LTLNEVENQ+GNLGKPL SMNLDELLK+VWSTEAN
Sbjct: 1   MASQSNGQQSHMQPCQLMRQTSWYNLTLNEVENQMGNLGKPLCSMNLDELLKNVWSTEAN 60

Query: 65  DSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREP 124
            S G+D E  STA+SSLQRQAS TLARALSGKTV QVW EIQ+GQKKR+GQEMK  +RE 
Sbjct: 61  QSMGMDSE--STATSSLQRQASFTLARALSGKTVAQVWKEIQEGQKKRFGQEMKVQEREQ 118

Query: 125 TLGELTLEDFLVQAGLFAEASVSP-MDLDTVGVVTMQSFPEKMSLSPSSSIGTL----TP 179
           TLGE TLEDFLVQAGLF EA++SP +DL TV  VT Q FP+ M LS S S GTL    T 
Sbjct: 119 TLGETTLEDFLVQAGLFTEATISPSLDLVTVAAVTPQCFPQNMVLSSSPSTGTLSDSTTS 178

Query: 180 RRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENL 232
              RD  A EKS ERRL+RKIKNRESAARSRARKQAYHNELVSKVSRLEEEN+
Sbjct: 179 GWNRD--APEKSTERRLKRKIKNRESAARSRARKQAYHNELVSKVSRLEEENI 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549144|ref|XP_002515627.1| DNA binding protein, putative [Ricinus communis] gi|223545265|gb|EEF46772.1| DNA binding protein, putative [Ricinus communis]

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 180/240 (75%), Positives = 201/240 (83%), Gaps = 11/240 (4%)

Query: 6   MGSQSNGQQSHLQPS--LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEA 63
           MGSQSNGQQSHLQP   L RQNSW+SLTLNEVENQL NLGKPLGSMNLDELLK+VWSTEA
Sbjct: 1   MGSQSNGQQSHLQPPYQLRRQNSWFSLTLNEVENQLENLGKPLGSMNLDELLKNVWSTEA 60

Query: 64  NDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQRE 123
           N    +DIEN+S+ASS  Q+ +    ARALSGKTV+QVW EI QGQKKR+ QE K+ ++E
Sbjct: 61  NH---LDIENTSSASSLQQQSSLTL-ARALSGKTVDQVWKEILQGQKKRFCQETKAQEKE 116

Query: 124 PTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPR--- 180
           PTLGE+TLEDFLVQAGLFAEAS+SPM+L TV  VT QSFP+KM+LS S S GTL+     
Sbjct: 117 PTLGEITLEDFLVQAGLFAEASLSPMELVTVDTVTPQSFPQKMALSSSPSTGTLSDTMAS 176

Query: 181 -RKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEK 238
            +KRD  +  EKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEE N+KLKKEK
Sbjct: 177 VQKRDAPDTVEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEANIKLKKEK 236

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104595|ref|XP_002313493.1| predicted protein [Populus trichocarpa] gi|222849901|gb|EEE87448.1| predicted protein [Populus trichocarpa]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 174/234 (74%), Positives = 196/234 (83%), Gaps = 9/234 (3%)

Query: 6   MGSQSNGQQSHLQPS-LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAN 64
           M SQ NGQQSHLQP  L RQNSWY+LTLNEVENQLGNLGKPL SMNLDELLK+VWSTEA+
Sbjct: 1   MASQRNGQQSHLQPYRLTRQNSWYNLTLNEVENQLGNLGKPLCSMNLDELLKNVWSTEAH 60

Query: 65  DSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREP 124
            S G+D E  ST+ SSLQ QASLTLARALSGKTV+QVW EIQQGQ+KR+G+EMK  +RE 
Sbjct: 61  QSVGMDSE--STSMSSLQHQASLTLARALSGKTVDQVWKEIQQGQEKRFGEEMKVQEREQ 118

Query: 125 TLGELTLEDFLVQAGLFAEASVSP-MDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPR--- 180
           TLGE+TLEDFLVQAGLFA+A++SP +DL TV  VT QSF +KM LS S S  TL+     
Sbjct: 119 TLGEMTLEDFLVQAGLFAKATISPSLDLVTVDAVTPQSFSQKMVLSSSPSTSTLSDTTTS 178

Query: 181 -RKRDD-NAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENL 232
            RKRD  +AFEKSIER+L+RKIKNRESAARSRARKQAYHNELVSK+S L EEN+
Sbjct: 179 GRKRDTPDAFEKSIERKLKRKIKNRESAARSRARKQAYHNELVSKISHLGEENI 232

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550905|ref|XP_003543823.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 3-like [Glycine max]

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 172/239 (71%), Positives = 199/239 (83%), Gaps = 7/239 (2%)

Query: 1   MGIQTMGSQSNGQQSHLQPS-LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW 59
           MGIQTMGSQ NGQQSHLQPS L RQ SWYSLTL+EV  QLG++GKPLGSMNLDELL++VW
Sbjct: 1   MGIQTMGSQGNGQQSHLQPSSLSRQGSWYSLTLDEVNCQLGDMGKPLGSMNLDELLQNVW 60

Query: 60  STEANDSTGIDIENSS-TASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMK 118
           + EA+ S  I  E+ + ++SSSLQRQASLTLARALSGKTV+ VW EIQQGQKKRYG+++K
Sbjct: 61  TAEASKSLVIGAESENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEDVK 120

Query: 119 SHQREPTLGELTLEDFLVQAGLFAEASVSP-MDLDTVGVVTMQSFPEKMSLSPSSSIGTL 177
           S + E TLGE TLEDFLVQAGLFAEAS+SP + LDT+     Q F +K  L  S SIG+L
Sbjct: 121 SQEGEMTLGETTLEDFLVQAGLFAEASISPAVGLDTMDSSAAQGFQQKTGLLSSPSIGSL 180

Query: 178 T---PRRKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENL 232
           +   P RKRD  +A+EK++ERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEEN+
Sbjct: 181 SDTRPGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENV 239

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435989|ref|XP_002269808.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Vitis vinifera]

 Score =  302 bits (774), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 158/248 (63%), Positives = 193/248 (77%), Gaps = 19/248 (7%)

Query: 6   MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
           MGSQ  GQ       LVRQ+SWYSLTL+EVENQLG+LGKPLGSMN+DELLK+VW  EAN 
Sbjct: 1   MGSQVGGQ-------LVRQSSWYSLTLDEVENQLGDLGKPLGSMNVDELLKNVWMAEANQ 53

Query: 66  STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
               DI+N+S+   SLQRQASLT+A+ALS KTVE+VW++IQQG+KK+ G ++K   REPT
Sbjct: 54  CVSADIDNASS-KISLQRQASLTIAQALSEKTVEEVWSDIQQGEKKKCGDDIKGQVREPT 112

Query: 126 LGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLT----PRR 181
           LGE+ LEDFLV+A +F +       LD VGVVT  +FP++M LSPS S+GTL+    P  
Sbjct: 113 LGEMKLEDFLVKAAVFVKG------LDIVGVVTPPNFPQQMGLSPSPSVGTLSDTSIPGH 166

Query: 182 KRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEAS 241
           +RD  + EK++ERRL+RKIKNRESAARSRARKQAYHNELVSKVSRLEEEN++LKKEKE  
Sbjct: 167 ERD-ASMEKTVERRLKRKIKNRESAARSRARKQAYHNELVSKVSRLEEENVRLKKEKEVE 225

Query: 242 TIFLLRSN 249
            +F   S+
Sbjct: 226 KMFPCESS 233

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444300784|gb|AGD98701.1| bZIP transcription factor family protein 3 [Camellia sinensis]

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 163/249 (65%), Positives = 196/249 (78%), Gaps = 8/249 (3%)

Query: 1   MGIQTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWS 60
           MGIQTMGS  +GQQ HLQP   RQNSW+  TL E++NQLG+LGKPLGSMNLDELLK+VW+
Sbjct: 1   MGIQTMGSHGSGQQPHLQP-FSRQNSWFGFTLEEIDNQLGDLGKPLGSMNLDELLKNVWT 59

Query: 61  TEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSH 120
            EAN STG+D  +SS+++SSLQRQASL+LARA SGKTV++VW +IQQGQK +  +EMK  
Sbjct: 60  AEANQSTGMDT-DSSSSASSLQRQASLSLARAFSGKTVDEVWRDIQQGQKMKNVEEMKGQ 118

Query: 121 QREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLT-- 178
           +RE TL E+TLEDFLV+AGLFAE S  P  +     VT Q    ++ LSPS+SI TL+  
Sbjct: 119 EREQTLSEITLEDFLVKAGLFAEVSSGPF-IRADNAVTCQKPLSQIGLSPSTSIDTLSDT 177

Query: 179 --PRRKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLK 235
             P RKR   +A E++I+RRLRRKIKNRESAARSRARKQAYHNELV+KVSRLEEEN+KL 
Sbjct: 178 PAPGRKRHATDAIERTIDRRLRRKIKNRESAARSRARKQAYHNELVNKVSRLEEENMKLL 237

Query: 236 KEKEASTIF 244
           KEK+   I 
Sbjct: 238 KEKDLERIL 246

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574569|ref|XP_003555418.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Glycine max]

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 164/242 (67%), Positives = 194/242 (80%), Gaps = 10/242 (4%)

Query: 1   MGIQTMGSQSNGQQSHLQPS-LVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW 59
           MGIQT+GS  NGQQSHLQPS L RQ SWYSLTL+EV  QLG++GKPLGSMNLDELL++VW
Sbjct: 1   MGIQTVGSLGNGQQSHLQPSSLSRQGSWYSLTLDEVNCQLGDMGKPLGSMNLDELLQNVW 60

Query: 60  STEANDST---GIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQE 116
           + EA+ S+   G++ EN S++SSSLQRQASLTLARALSGKTV+ VW EIQQGQKK+YG++
Sbjct: 61  TAEASKSSVVVGVESENMSSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKKYGED 120

Query: 117 MKSHQREPTLGELTLEDFLVQAGLFAEASVSP-MDLDTVGVVTMQSFPEKMSLSPSSSIG 175
           ++S + E TLGE TLEDFLVQAGLFAEAS+SP + LD +  +  Q F +K  L  SS   
Sbjct: 121 VRSQEGEMTLGETTLEDFLVQAGLFAEASISPAVGLDAMDSLATQGFQQKTGLLSSSPSI 180

Query: 176 TLTPR----RKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEE 230
                    RKRD  +A+EK++ERRLRRKIKNRESAARSRARKQAYHNELV KVSRLEEE
Sbjct: 181 GSLSDTRLGRKRDASDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEE 240

Query: 231 NL 232
           N+
Sbjct: 241 NV 242

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147836035|emb|CAN63966.1| hypothetical protein VITISV_032518 [Vitis vinifera]

 Score =  292 bits (747), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 154/242 (63%), Positives = 186/242 (76%), Gaps = 17/242 (7%)

Query: 6   MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
           MGS   GQ       LVRQ+SWYSLTL+EVENQLG+LGKPLGSMN+DELLK+VW  EAN 
Sbjct: 1   MGSXVGGQ-------LVRQSSWYSLTLDEVENQLGDLGKPLGSMNVDELLKNVWMAEANQ 53

Query: 66  STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
               DI+N+S+   SLQRQASLT+A+ALS KTVE+VW++IQQG+KK+ G ++K   REPT
Sbjct: 54  CVSADIDNASS-KISLQRQASLTIAQALSEKTVEEVWSDIQQGEKKKCGDDIKGQVREPT 112

Query: 126 LGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKMSLSPSSSIGTLTPRR---K 182
           LGE+ LEDFLV+A +F +       LD VGVVT  +FP++M LSPS S+GTL+       
Sbjct: 113 LGEMKLEDFLVKAAVFVKG------LDIVGVVTPPNFPQQMGLSPSPSVGTLSDTSIXGH 166

Query: 183 RDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEAST 242
             D + EK++ERRL+RKIKNRESAARSRARKQAYHNELVSKVSRLEEENL+LKKEK    
Sbjct: 167 XRDASMEKTVERRLKRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLRLKKEKRWQR 226

Query: 243 IF 244
           I+
Sbjct: 227 IW 228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452690|ref|XP_004144092.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus]

 Score =  290 bits (742), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 160/246 (65%), Positives = 195/246 (79%), Gaps = 8/246 (3%)

Query: 1   MGIQTMGSQSNGQQSHLQP-SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW 59
           MGIQTMGSQ NGQQSHL P SL RQNSWY LTL+E++NQLG +GKPLGSMNLDELL ++W
Sbjct: 1   MGIQTMGSQLNGQQSHLHPASLPRQNSWYGLTLDEIKNQLGGMGKPLGSMNLDELLHNIW 60

Query: 60  STEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKS 119
           + EAN S G++ E+SS+    LQRQAS +LARALSGKTV+ VW EIQ+GQKK+  + +KS
Sbjct: 61  TAEANQSMGMESESSSSVHY-LQRQASFSLARALSGKTVDHVWKEIQEGQKKKNRENLKS 119

Query: 120 HQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKM-----SLSPSSSI 174
              E TLG++TLEDFL+QAG++AEAS SP+D      +T ++F  +M     SLS  +  
Sbjct: 120 QNSETTLGDVTLEDFLIQAGIYAEASPSPLDAIDTMTLTEKNFSPEMGLLSSSLSLGTLS 179

Query: 175 GTLTPRRKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLK 233
            T  P+R+RD  +  EK++ERRL+RKIKNRESAARSRARKQAYHNELV+KVSRLEEENLK
Sbjct: 180 DTTIPKRRRDPSDTLEKTMERRLKRKIKNRESAARSRARKQAYHNELVNKVSRLEEENLK 239

Query: 234 LKKEKE 239
           LKKEKE
Sbjct: 240 LKKEKE 245

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449525480|ref|XP_004169745.1| PREDICTED: LOW QUALITY PROTEIN: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus]

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 159/246 (64%), Positives = 194/246 (78%), Gaps = 8/246 (3%)

Query: 1   MGIQTMGSQSNGQQSHLQP-SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVW 59
           MGIQTMGSQ NGQQSHL P SL RQNSWY LTL+E++NQLG +GKPLGSMNLDELL ++W
Sbjct: 1   MGIQTMGSQLNGQQSHLHPASLPRQNSWYGLTLDEIKNQLGGMGKPLGSMNLDELLHNIW 60

Query: 60  STEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKS 119
           + EAN S G++ E+SS+    LQRQAS +LARALSGKTV+ VW EIQ+GQK +  + +KS
Sbjct: 61  TAEANQSMGMESESSSSVHY-LQRQASFSLARALSGKTVDHVWKEIQEGQKXKNRENLKS 119

Query: 120 HQREPTLGELTLEDFLVQAGLFAEASVSPMDLDTVGVVTMQSFPEKM-----SLSPSSSI 174
              E TLG++TLEDFL+QAG++AEAS SP+D      +T ++F  +M     SLS  +  
Sbjct: 120 QNSETTLGDVTLEDFLIQAGIYAEASPSPLDAIDTMTLTEKNFSPEMGLLSSSLSLGTLS 179

Query: 175 GTLTPRRKRD-DNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLK 233
            T  P+R+RD  +  EK++ERRL+RKIKNRESAARSRARKQAYHNELV+KVSRLEEENLK
Sbjct: 180 DTTIPKRRRDPSDTLEKTMERRLKRKIKNRESAARSRARKQAYHNELVNKVSRLEEENLK 239

Query: 234 LKKEKE 239
           LKKEKE
Sbjct: 240 LKKEKE 245

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
TAIR|locus:2103665	297	AREB3 "ABA-responsive element	0.546	0.457	0.514	4.7e-44
TAIR|locus:2063275	262	EEL "AT2G41070" [Arabidopsis t	0.823	0.782	0.433	1.5e-33
TAIR|locus:2076018	331	DPBF2 "AT3G44460" [Arabidopsis	0.514	0.386	0.420	3.7e-29
TAIR|locus:2049425	442	ABI5 "ABA INSENSITIVE 5" [Arab	0.212	0.119	0.566	8.2e-28
UNIPROTKB|Q8RZ35	388	P0489B03.11 "Putative ABA resp	0.409	0.262	0.372	2.9e-20
TAIR|locus:2118969	454	ABF3 "AT4G34000" [Arabidopsis	0.289	0.158	0.443	9.2e-17
UNIPROTKB|Q6ZDF3	318	TRAB1 "bZIP transcription fact	0.381	0.298	0.417	8.7e-16
TAIR|locus:2024224	270	GBF4 "G-box binding factor 4"	0.485	0.448	0.402	1.2e-10
TAIR|locus:2159986	370	AT5G42910 "AT5G42910" [Arabido	0.417	0.281	0.382	1.5e-08
TAIR|locus:2172507	315	AT5G44080 [Arabidopsis thalian	0.594	0.469	0.331	4.4e-08

TAIR|locus:2103665 AREB3 "ABA-responsive element binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 71/138 (51%), Positives = 90/138 (65%)

Query:     6 MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
             M SQ    +     SL RQ+S YSLTL+EV+N LG+ GK LGSMNLDELLKSV S EAN 
Sbjct:     1 MDSQRGIVEQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQ 60

Query:    66 STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
              + + +   + A   L RQ SLTL R LS KTV++VW +IQQ   K  G   +   ++PT
Sbjct:    61 PSSMAVNGGAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQN--KNGGSAHERRDKQPT 118

Query:   126 LGELTLEDFLVQAGLFAE 143
             LGE+TLED L++AG+  E
Sbjct:   119 LGEMTLEDLLLKAGVVTE 136

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2063275 EEL "AT2G41070" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 104/240 (43%), Positives = 132/240 (55%)

Query:     6 MGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEAND 65
             MGS     +  +  SL RQNS YSL L+EV+  LG+ GKPLGSMNLDELLK+V       
Sbjct:     1 MGSIRGNIEEPISQSLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTVLPP---- 56

Query:    66 STGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREPT 125
                        A   L RQ SLTL R LS KTV++VW +IQQ  K   G    +  ++PT
Sbjct:    57 -----------AEEGLVRQGSLTLPRDLSKKTVDEVWRDIQQ-DKNGNGTSTTTTHKQPT 104

Query:   126 LGELTLEDFLVQAGLFAEASVSPMDLDTVGV----VTMQSFPEKMS---------LSPSS 172
             LGE+TLED L++AG+  E  V   ++  +      V     P++           +    
Sbjct:   105 LGEITLEDLLLRAGVVTETVVPQENVVNIASNGQWVEYHHQPQQQQGFMTYPVCEMQDMV 164

Query:   173 SIGTLT-----PRRKR-DDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSR 226
              +G L+     P RKR      EK++ERR +R IKNRESAARSRARKQAY +EL  KVSR
Sbjct:   165 MMGGLSDTPQAPGRKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSR 224

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

TAIR|locus:2076018 DPBF2 "AT3G44460" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
 Identities = 58/138 (42%), Positives = 83/138 (60%)

Query:    23 RQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWST-EANDSTGIDIENSSTASSSL 81
             RQNS  SLTL+E++ + G   K  G+MN+DE L ++W+T E ND+ G    N     + L
Sbjct:    37 RQNSILSLTLDEIQMKSG---KSFGAMNMDEFLANLWTTVEENDNEGGGAHNDGEKPAVL 93

Query:    82 QRQASLTLARALSGKTVEQVWNEIQQGQKKR-----YGQEMKSH-QREPTLGELTLEDFL 135
              RQ SL+L   L  KTV++VW EIQ G ++       GQ    + +R+ TLGE+TLEDFL
Sbjct:    94 PRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDFL 153

Query:   136 VQAGLFAEASVSPMDLDT 153
             V+AG+  E   + M + +
Sbjct:   154 VKAGVVQEPLKTTMRMSS 171

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0033613 "activating transcription factor binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2049425 ABI5 "ABA INSENSITIVE 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 8.2e-28, Sum P(4) = 8.2e-28
 Identities = 30/53 (56%), Positives = 39/53 (73%)

Query:   174 IGTLTPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSR 226
             +G L  R++  D   EK +ERR RR IKNRESAARSRARKQAY  EL +++++
Sbjct:   337 MGGLRGRKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQ 389

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048316 "seed development" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010200 "response to chitin" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=IEP

GO:0009845 "seed germination" evidence=IEP;RCA

GO:0010187 "negative regulation of seed germination" evidence=IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q8RZ35 P0489B03.11 "Putative ABA response element binding factor" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 155 (59.6 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
 Identities = 44/118 (37%), Positives = 64/118 (54%)

Query:     4 QTMGSQSNGQQSHLQPSLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEA 63
             Q+ G++  G++  + P L RQ+S  SLTL E++N L   G+  GSMN+DE + ++W+ E 
Sbjct:    24 QSGGTKVGGEEE-IAP-LARQSSILSLTLEELQNSLCEPGRNFGSMNMDEFVANIWNAEE 81

Query:    64 -NDSTG-----------IDIENSS--TASSSLQRQASLTLARALSGKTVEQVWNEIQQ 107
                +TG           +D  + S     S L RQ S +L   L  KTVE+VW EI Q
Sbjct:    82 FQATTGGCKGAMEEAKVVDSGSGSGDAGGSGLCRQGSFSLPLPLCQKTVEEVWTEINQ 139

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

TAIR|locus:2118969 ABF3 "AT4G34000" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
 Identities = 35/79 (44%), Positives = 47/79 (59%)

Query:    80 SLQRQASLTLARALSGKTVEQVWNEIQQ----GQKKRYGQEMKSHQREPTLGELTLEDFL 135
             SLQRQ SLTL R +S K V+ VW E+ +    G     G      QR+ TLGE+TLE+FL
Sbjct:   120 SLQRQGSLTLPRTISQKRVDDVWKELMKEDDIGNGVVNGGTSGIPQRQQTLGEMTLEEFL 179

Query:   136 VQAGLFAEASVSPMDLDTV 154
             V+AG+  E    P  +++V
Sbjct:   180 VRAGVVRE---EPQPVESV 195

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009755 "hormone-mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

UNIPROTKB|Q6ZDF3 TRAB1 "bZIP transcription factor TRAB1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 199 (75.1 bits), Expect = 8.7e-16, P = 8.7e-16
 Identities = 43/103 (41%), Positives = 64/103 (62%)

Query:    49 MNLDELLKSVWSTEANDSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQG 108
             MN+DELL+S+W+ E + +       ++ A   LQRQ SLTL R LS KTV++VW ++++ 
Sbjct:     1 MNMDELLRSIWTAEESQAMASASAAAAAAEGGLQRQGSLTLPRTLSVKTVDEVWRDLERE 60

Query:   109 QKKRY--------GQEMKSHQREPTLGELTLEDFLVQAGLFAE 143
                          G E +  +R+PTLGE+TLE+FLV+AG+  E
Sbjct:    61 ASPGAAAADGGGGGGEQQQPRRQPTLGEMTLEEFLVRAGVVRE 103

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2024224 GBF4 "G-box binding factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 56/139 (40%), Positives = 72/139 (51%)

Query:    94 SGKTVEQVWNEIQQGQKKRYGQEMKSHQREPTLGELTLEDFLVQA----GLFAEASVS-P 148
             +GK+V+ VW EI  G++K     MK  + E  +   TLEDFL +A    G   E  V  P
Sbjct:    83 NGKSVDDVWKEIVSGEQKTI--MMKEEEPEDIM---TLEDFLAKAEMDEGASDEIDVKIP 137

Query:   149 MD-LDTVGVVTMQSFPEKMSLS---PSSSIGTLTPRRKRDD---NAFEKSIERRLRRKIK 201
              + L+  G  T   FP +   S      S+G    R KR      A +K+  +R +R IK
Sbjct:   138 TERLNNDGSYTFD-FPMQRHSSFQMVEGSMGGGVTRGKRGRVMMEAMDKAAAQRQKRMIK 196

Query:   202 NRESAARSRARKQAYHNEL 220
             NRESAARSR RKQAY  EL
Sbjct:   197 NRESAARSRERKQAYQVEL 215

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

TAIR|locus:2159986 AT5G42910 "AT5G42910" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 47/123 (38%), Positives = 65/123 (52%)

Query:    20 SLVRQNSWYSLTLNEVENQLGNLGKPLGSMNLDELLKSVWSTEANDSTGIDIENSSTASS 79
             SL RQ S YS T+++ +    +LG   GSMN+DEL+K + S E         E S     
Sbjct:    19 SLSRQGSIYSWTVDQFQT---SLGLDCGSMNMDELVKHISSAEETQ------EGS----- 64

Query:    80 SLQRQASLTLARALSGKTVEQVWNEIQQGQ--KKRYGQEMKSH-QREPTLGELTLEDFLV 136
               QRQ S TL   LS + V +VW  I + +      G    +H Q + TLGE+TLE+F +
Sbjct:    65 --QRQGSTTLPPTLSKQNVGEVWKSITEEKHTNNNGGVTNITHLQGQQTLGEITLEEFFI 122

Query:   137 QAG 139
             +AG
Sbjct:   123 RAG 125

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2172507 AT5G44080 [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 59/178 (33%), Positives = 82/178 (46%)

Query:    65 DSTGIDIENSSTASSSLQRQASLTLARALSGKTVEQVWNEIQQGQKKRYGQEMKSHQREP 124
             D++   +E ++T +S +      T      GK+V+++W E+  G+    G+ MK    E 
Sbjct:    90 DASPAPMEITTTTASDVVDHGGGT-ETTRGGKSVDEIWREMVSGE----GKGMKEETSEE 144

Query:   125 TLGELTLEDFLVQAGLFAEASV--SPMDLDTVGVVTMQSF--------PEKMSLSPSSSI 174
              +   TLEDFL +A +  E +V  S  DLD    VT   F        P +M      SI
Sbjct:   145 IM---TLEDFLAKAAVEDETAVTASAEDLDVKIPVTNYGFDHSAPPHNPFQMIDKVEGSI 201

Query:   175 ------------GTLTPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNEL 220
                         G    R +      +K+  +R RR IKNRESAARSR RKQAY  EL
Sbjct:   202 VAFGNGLDVYGGGARGKRARVMVEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVEL 259

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	249
smart00338	65	smart00338, BRLZ, basic region leucin zipper	6e-11
pfam00170	64	pfam00170, bZIP_1, bZIP transcription factor	1e-07
pfam07716	54	pfam07716, bZIP_2, Basic region leucine zipper	2e-06
cd12193	54	cd12193, B_zip1, basic leucine zipper DNA-binding	2e-05

>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper

 Score = 56.4 bits (137), Expect = 6e-11
 Identities = 27/47 (57%), Positives = 34/47 (72%)

Query: 193 ERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE 239
           E+R RR+ +NRE+A RSR RK+A   EL  KV +LE EN +LKKE E
Sbjct: 4   EKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIE 50

Length = 65

>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 26/46 (56%), Positives = 31/46 (67%)

Query: 194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE 239
           +R RR+ KNRE+A RSR RK+AY  EL  KV  LE EN  L+ E E
Sbjct: 5   KRERRRQKNREAARRSRLRKKAYIEELEEKVKELEAENKTLRSELE 50

The Pfam entry includes the basic region and the leucine zipper region. Length = 64

>gnl|CDD|203738 pfam07716, bZIP_2, Basic region leucine zipper

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 190 KSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEA 240
           K  E R RR+ +N E+A RSR +K+    EL  +V  LEEEN +L+++ E 
Sbjct: 1   KDDEYRDRRR-RNNEAARRSREKKKQREEELEERVKELEEENAQLRQKVEQ 50

Length = 54

>gnl|CDD|213400 cd12193, B_zip1, basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 20/44 (45%), Positives = 26/44 (59%)

Query: 194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE 237
            R R++ +NRE+A RSRARK     +L  KV  L  EN  L+ E
Sbjct: 2   PRARKRARNREAARRSRARKMERMKQLEDKVEELTSENSDLEDE 45

Basic leucine zipper (bZIP) transcription factors act in networks of homo- and hetero-dimers in the regulation in a diverse set of cellular pathways. Classical leucine zippers have alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization creates a pair of basic regions that bind DNA and undergo conformational change. GCN4 was identified in Saccharomyces cerevisiae from mutations in a deficiency in activation with the general amino acid control pathway. GCN4 encodes a trans-activator of amino acid biosynthetic genes containing 2 acidic activation domains and a C-terminal bZIP domain, comprised of a basic alpha-helical DNA-binding region and a coiled-coil dimerization region. Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	249
KOG4005	292	consensus Transcription factor XBP-1 [Transcriptio	99.36
smart00338	65	BRLZ basic region leucin zipper.	99.17
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	99.05
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	99.03
KOG3584	348	consensus cAMP response element binding protein an	99.02
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	99.02
KOG0709	472	consensus CREB/ATF family transcription factor [Tr	98.74
PF03131	92	bZIP_Maf: bZIP Maf transcription factor; InterPro:	97.83
KOG0837	279	consensus Transcriptional activator of the JUN fam	96.86
KOG4571	294	consensus Activating transcription factor 4 [Trans	96.7
KOG3119	269	consensus Basic region leucine zipper transcriptio	96.42
KOG3863	604	consensus bZIP transcription factor NRF1 [Transcri	96.37
KOG4196	135	consensus bZIP transcription factor MafK [Transcri	96.29
KOG1414	395	consensus Transcriptional activator FOSB/c-Fos and	84.91
PF01166	59	TSC22: TSC-22/dip/bun family; InterPro: IPR000580	81.13

>KOG4005 consensus Transcription factor XBP-1 [Transcription]

Probab=99.36  E-value=1.9e-12  Score=117.34  Aligned_cols=67  Identities=34%  Similarity=0.426  Sum_probs=62.7

Q ss_pred             CcCCCCCcchhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 025678          178 TPRRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEASTIF  244 (249)
Q Consensus       178 ~~~rkR~~~~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e~~~~~  244 (249)
                      .+.|||.+.+|...+||.+||++|||.+|+.+|.|||+++.++|.++..|.+||+.|+.|++..+-.
T Consensus        53 ~~~rKr~RL~HLS~EEK~~RrKLKNRVAAQtaRDrKKaRm~eme~~i~dL~een~~L~~en~~Lr~~  119 (292)
T KOG4005|consen   53 QPKRKRRRLDHLSWEEKVQRRKLKNRVAAQTARDRKKARMEEMEYEIKDLTEENEILQNENDSLRAI  119 (292)
T ss_pred             chHHHHHhhcccCHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5679999999999999999999999999999999999999999999999999999999998866543

>smart00338 BRLZ basic region leucin zipper

Probab=99.17  E-value=1.1e-10  Score=85.14  Aligned_cols=48  Identities=56%  Similarity=0.665  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          192 IERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       192 ~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      ++|+.+|+++||+||++||.||++|+.+||.+|..|+.+|..|+.+.+
T Consensus         3 ~~k~~rR~~rNR~aA~~~R~rKk~~~~~Le~~~~~L~~en~~L~~~~~   50 (65)
T smart00338        3 DEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIE   50 (65)
T ss_pred             cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999998854

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=99.05  E-value=3.5e-10  Score=111.69  Aligned_cols=52  Identities=40%  Similarity=0.519  Sum_probs=48.6

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          188 FEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       188 ~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      .|..+-||+.|||||||||+.||+|||+|+..||.++..|..||+.|++||.
T Consensus       275 ~d~kv~krqQRmIKNResA~~SRkKKKEy~~~Le~rLq~ll~Ene~Lk~ENa  326 (655)
T KOG4343|consen  275 SDIKVLKRQQRMIKNRESACQSRKKKKEYMLGLEARLQALLSENEQLKKENA  326 (655)
T ss_pred             cCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence            4566788889999999999999999999999999999999999999999976

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=99.03  E-value=9.3e-10  Score=80.05  Aligned_cols=48  Identities=54%  Similarity=0.702  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          192 IERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       192 ~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      ..++.+|+++||+||+++|.||++|+.+||.+|..|+.+|..|+.++.
T Consensus         3 ~~k~~~rr~rNR~AAr~~R~RKk~~~~~Le~~~~~L~~en~~L~~~~~   50 (64)
T PF00170_consen    3 EDKRERRRERNREAARRSRQRKKQYIEELEEKVEELESENEELKKELE   50 (64)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999999998854

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]

Probab=99.02  E-value=4.9e-10  Score=104.09  Aligned_cols=57  Identities=33%  Similarity=0.475  Sum_probs=50.0

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhh
Q 025678          188 FEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE-KEASTIF  244 (249)
Q Consensus       188 ~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e-~e~~~~~  244 (249)
                      .|+...||+-|++||||+|+.+|+|||+|+++||.+|+.||.+|..|-.| +.|..+.
T Consensus       285 aee~trKRevRLmKNREAARECRRKKKEYVKCLENRVAVLENQNKaLIEELKtLKeLY  342 (348)
T KOG3584|consen  285 AEEATRKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKALIEELKTLKELY  342 (348)
T ss_pred             chhhhhHHHHHHHhhHHHHHHHHHhHhHHHHHHHhHHHHHhcccHHHHHHHHHHHHHh
Confidence            45667888999999999999999999999999999999999999999888 4454443

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=99.02  E-value=1.5e-09  Score=76.98  Aligned_cols=49  Identities=47%  Similarity=0.628  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          191 SIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEA  240 (249)
Q Consensus       191 ~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e~  240 (249)
                      .++++.||. +||+||++||.||++|+.+||.+|..|+.+|..|+.+++.
T Consensus         2 ~~~~~~rR~-rNr~AA~r~R~rkk~~~~~le~~~~~L~~en~~L~~~i~~   50 (54)
T PF07716_consen    2 DEEKRERRE-RNREAARRSRQRKKQREEELEQEVQELEEENEQLRQEIAQ   50 (54)
T ss_dssp             CHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            357788888 9999999999999999999999999999999999998663

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>KOG0709 consensus CREB/ATF family transcription factor [Transcription]

Probab=98.74  E-value=9.8e-09  Score=100.09  Aligned_cols=52  Identities=44%  Similarity=0.623  Sum_probs=47.0

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          188 FEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       188 ~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      .|+.+-||.||||+|++|||.||+|||+|++.||.+|....+||++|+++.+
T Consensus       245 aEEriLKrvRRKIrNK~SAQESRrkKkeYid~LE~rv~~~taeNqeL~kkV~  296 (472)
T KOG0709|consen  245 AEERILKRVRRKIRNKRSAQESRRKKKEYIDGLESRVSAFTAENQELQKKVE  296 (472)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHhHhhHHHHHhhhhhhcccCcHHHHHHHH
Confidence            3455677889999999999999999999999999999999999999999854

>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell

Probab=97.83  E-value=2e-06  Score=67.06  Aligned_cols=51  Identities=29%  Similarity=0.362  Sum_probs=41.7

Q ss_pred             hhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          187 AFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE  237 (249)
Q Consensus       187 ~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e  237 (249)
                      ..+...-|..||.+|||.+|+.||.||..++.+||.++..|..+...|..+
T Consensus        23 ~~q~~~lK~~RRr~KNR~~A~~cR~rk~~~~~~Le~e~~~l~~~~~~L~~e   73 (92)
T PF03131_consen   23 EEQIAELKQRRRRLKNRGYAQNCRKRKLDQIEELEEEIEQLRQEIEQLQQE   73 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455688899999999999999999999999999988877665555544

MafG and MafH are small Mafs which lack a putative transactivation domain. They behave as transcriptional repressors when they dimerize among themselves. However they also serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Maf transcription factors contain a conserved basic region leucine zipper (bZIP) domain, which mediates their dimerization and DNA binding property. Neural retina-specific leucine zipper proteins also belong to this family. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. This structure enables Mafs to make a broader area of contact with DNA and to recognise longer DNA sequences. In particular, the two residues at the beginning of helix H2 are positioned to recognise the flanking region []. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF2-E2 transcription factor. In mouse, Maf1 may play an early role in axial patterning. Defects in these proteins are a cause of autosomal dominant retinitis pigmentosa. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2KZ5_A 3A5T_A 1K1V_A 1SKN_P 2WT7_B 2WTY_B.

>KOG0837 consensus Transcriptional activator of the JUN family [Transcription]

Probab=96.86  E-value=0.0033  Score=58.29  Aligned_cols=47  Identities=34%  Similarity=0.439  Sum_probs=39.0

Q ss_pred             HHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          191 SIERRLRR-KIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE  237 (249)
Q Consensus       191 ~~err~rR-~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e  237 (249)
                      .+..|..| .++||++|.+||+||-.+|..||.+|..|..+|..|-.+
T Consensus       202 qe~~kleRkrlrnreaa~Kcr~rkLdrisrLEdkv~~lk~~n~~L~~~  249 (279)
T KOG0837|consen  202 QEKIKLERKRLRNREAASKCRKRKLDRISRLEDKVKTLKIYNRDLASE  249 (279)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence            33444444 689999999999999999999999999999988876555

>KOG4571 consensus Activating transcription factor 4 [Transcription]

Probab=96.70  E-value=0.0051  Score=57.70  Aligned_cols=53  Identities=32%  Similarity=0.498  Sum_probs=43.3

Q ss_pred             HHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhh
Q 025678          191 SIERRLRR-KIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE-KEASTI  243 (249)
Q Consensus       191 ~~err~rR-~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e-~e~~~~  243 (249)
                      ..+++.|| .++|..+|.|=|+||++-.+.|+-+...|+.+|++|+.+ .++++-
T Consensus       223 ~~~~~~~rkr~qnk~AAtRYRqKkRae~E~l~ge~~~Le~rN~~LK~qa~~lerE  277 (294)
T KOG4571|consen  223 TPEKKLRRKRQQNKAAATRYRQKKRAEKEALLGELEGLEKRNEELKDQASELERE  277 (294)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445555 557777899999999999999999999999999999988 456554

>KOG3119 consensus Basic region leucine zipper transcription factor [Transcription]

Probab=96.42  E-value=0.0092  Score=54.94  Aligned_cols=54  Identities=28%  Similarity=0.437  Sum_probs=44.5

Q ss_pred             chhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          186 NAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       186 ~~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      ...++.+.+-..|.-+|=++|+|||.+.|...+++..+|..|+.||+.|+.+.+
T Consensus       186 ~~~~~~~~~y~err~rNN~A~~kSR~~~k~~~~e~~~r~~~leken~~lr~~v~  239 (269)
T KOG3119|consen  186 SPVEKKDPEYKERRRRNNEAVRKSRDKRKQKEDEMAHRVAELEKENEALRTQVE  239 (269)
T ss_pred             CchhcCCHHHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444444455566788999999999999999999999999999999999965

>KOG3863 consensus bZIP transcription factor NRF1 [Transcription]

Probab=96.37  E-value=0.0033  Score=63.86  Aligned_cols=50  Identities=30%  Similarity=0.385  Sum_probs=44.6

Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhh
Q 025678          196 LRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE-KEASTIFL  245 (249)
Q Consensus       196 ~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e-~e~~~~~~  245 (249)
                      .||.=|||.||+++|+||-.-|..||.+|..|+.|-++|.+| .++++.|+
T Consensus       492 IRRRgKNkvAAQnCRKRKLd~I~nLE~ev~~l~~eKeqLl~Er~~~d~~L~  542 (604)
T KOG3863|consen  492 IRRRGKNKVAAQNCRKRKLDCILNLEDEVEKLQKEKEQLLRERDELDSTLG  542 (604)
T ss_pred             cccccccchhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467789999999999999999999999999999999998888 56776654

>KOG4196 consensus bZIP transcription factor MafK [Transcription]

Probab=96.29  E-value=0.024  Score=47.82  Aligned_cols=52  Identities=29%  Similarity=0.335  Sum_probs=38.6

Q ss_pred             hhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          187 AFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEK  238 (249)
Q Consensus       187 ~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~  238 (249)
                      -.|.+--|..||-+|||==|+-+|.|.-..-.+||.+...|..+.++|+.++
T Consensus        46 reEVvrlKQrRRTLKNRGYA~sCR~KRv~Qk~eLE~~k~~L~qqv~~L~~e~   97 (135)
T KOG4196|consen   46 REEVVRLKQRRRTLKNRGYAQSCRVKRVQQKHELEKEKAELQQQVEKLKEEN   97 (135)
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445556667789999999999999999999999976555555555555443

>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription]

Probab=84.91  E-value=0.12  Score=49.96  Aligned_cols=51  Identities=33%  Similarity=0.347  Sum_probs=44.5

Q ss_pred             cchhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          185 DNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLK  235 (249)
Q Consensus       185 ~~~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~  235 (249)
                      ....+..+++++|=.++||.+|-++|.|||-.+..|+.+...+..+|..|.
T Consensus       276 ~~~~~~p~~~~~~~lern~~aas~~r~~~k~~~~~~~~~~~~~~~~n~~l~  326 (395)
T KOG1414|consen  276 RTVDEDPDERRRRFLERNRAAASRCRQKKKVWVLSLEKKAEELSSENGQLL  326 (395)
T ss_pred             cccCCCchhhhhhhhhhhhhhhccccCCcccccccccccccchhhhhcccc
Confidence            355666788885558899999999999999999999999999999998888

>PF01166 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 Several eukaryotic proteins are evolutionary related and are thought to be involved in transcriptional regulation

Probab=81.13  E-value=2.8  Score=31.04  Aligned_cols=23  Identities=43%  Similarity=0.421  Sum_probs=14.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 025678          215 AYHNELVSKVSRLEEENLKLKKE  237 (249)
Q Consensus       215 ay~~eLE~~v~~L~~EN~~L~~e  237 (249)
                      ..|.+|+.++..|+.||..|+..
T Consensus        21 ~~I~eL~~~n~~Le~EN~~Lk~~   43 (59)
T PF01166_consen   21 EQIAELEERNSQLEEENNLLKQN   43 (59)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            44556666666666666666543

These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Proteins containing this signature include: Vertebrate protein TSC-22 [], a transcriptional regulator which seems to act on C-type natriuretic peptide (CNP) promoter. Mammalian protein DIP (DSIP-immunoreactive peptide) [], a protein whose function is not yet known. Drosophila protein bunched [] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis. Caenorhabditis elegans hypothetical protein T18D3.7. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1DIP_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	249
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	3e-11
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	1e-08
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	7e-08
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	2e-07
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	2e-07
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	2e-05
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	2e-05
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	8e-05
2wt7_B	90	Transcription factor MAFB; transcription, transcri	2e-04
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	2e-04

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55

 Score = 56.3 bits (136), Expect = 3e-11
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE 237
           +R  R +KNRE+A  SR +K+ Y   L ++V+ LE +N  L +E
Sbjct: 1   KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEE 44

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61

 Score = 49.3 bits (118), Expect = 1e-08
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE 237
           +R +   +NR +A+RSR +++ +   L  K   L   N +L+ E
Sbjct: 1   KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSE 44

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Length = 63

 Score = 47.5 bits (113), Expect = 7e-08
 Identities = 14/45 (31%), Positives = 28/45 (62%)

Query: 193 ERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE 237
           E+R  R+ +N+ +AA+ R R++   + L ++  +LE+E   L+ E
Sbjct: 1   EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTE 45

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Length = 63

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 13/44 (29%), Positives = 26/44 (59%)

Query: 194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE 237
           ++L++  +N+ +A R R +K+A    L  +   LE++N  LK+ 
Sbjct: 2   KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKER 45

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Length = 62

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEA 240
           +  R++++NR +A++SR RK      L  KV  L+ +N +L      
Sbjct: 1   KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANM 47

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Length = 87

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 13/57 (22%), Positives = 27/57 (47%)

Query: 181 RKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE 237
           + +     +K  +    R+ +N  +  +SR + +  + E   KV  L  EN +L+K+
Sbjct: 2   KSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKK 58

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Length = 63

 Score = 40.2 bits (94), Expect = 2e-05
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 189 EKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE 239
            +S +    ++ +N E+A RSRARK     +L  KV  L  +N  L+ E  
Sbjct: 4   PESSDPAALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVA 54

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Length = 107

 Score = 40.0 bits (93), Expect = 8e-05
 Identities = 17/61 (27%), Positives = 29/61 (47%)

Query: 180 RRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE 239
           +  R  +  E    ++ RR +KNR  AA  R ++     EL  + + L++E  KL  E  
Sbjct: 23  QHLRGLSKEEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENA 82

Query: 240 A 240
           +
Sbjct: 83  S 83

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Length = 90

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 29/60 (48%)

Query: 180 RRKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE 239
           R  R     E    ++ RR +KNR  A   R ++    + L ++ ++L ++  +LK+E  
Sbjct: 13  RHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVS 72

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A Length = 78

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 13/57 (22%), Positives = 27/57 (47%)

Query: 181 RKRDDNAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE 237
           + +     +K  +    R+ +N  +  +SR + +  + E   KV  L  EN +L+K+
Sbjct: 2   KSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKK 58

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	249
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	99.53
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	99.22
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	99.11
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	99.1
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	99.03
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	98.62
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	98.36
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	98.35
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	98.3
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	98.29
2wt7_B	90	Transcription factor MAFB; transcription, transcri	97.94
1skn_P	92	DNA-binding domain of SKN-1; complex (transcriptio	96.22
3s9g_A	104	Protein hexim1; cyclin T-binding domain (TBD), cyc	93.03
2c9l_Y	63	EB1, zebra, BZLF1 trans-activator protein; viral p	92.73
2oqq_A	42	Transcription factor HY5; homodimer leucine zipper	92.57
2oxj_A	34	Hybrid alpha/beta peptide based on the GCN4-P1 Se	88.57
2kz5_A	91	Transcription factor NF-E2 45 kDa subunit; structu	87.99
3m48_A	33	General control protein GCN4; leucine zipper, synt	87.65
1kd8_A	36	GABH AIV, GCN4 acid base heterodimer acid-D12IA16V	86.54
1kd8_B	36	GABH BLL, GCN4 acid base heterodimer base-D12LA16L	86.48
3c3f_A	34	Alpha/beta peptide with the GCN4-PLI SIDE chain S	84.71
3c3g_A	33	Alpha/beta peptide with the GCN4-PLI SIDE chain S	83.04
1dip_A	78	Delta-sleep-inducing peptide immunoreactive peptid	80.59

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=99.53  E-value=1.5e-14  Score=102.85  Aligned_cols=47  Identities=40%  Similarity=0.534  Sum_probs=44.6

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEA  240 (249)
Q Consensus       194 rr~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e~  240 (249)
                      |+++|||+||+||++||.||++|+++||.+|..|+.||..|+.+.+.
T Consensus         1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~   47 (55)
T 1dh3_A            1 KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELKA   47 (55)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999663

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=99.22  E-value=2.7e-11  Score=87.76  Aligned_cols=47  Identities=30%  Similarity=0.485  Sum_probs=44.4

Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          193 ERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       193 err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      |||++|+.+||+||++||.||++|+.+|+.+|..|+.+|..|+.+..
T Consensus         1 Ekr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~   47 (63)
T 2wt7_A            1 EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIA   47 (63)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999998843

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=99.11  E-value=1.6e-10  Score=82.93  Aligned_cols=46  Identities=28%  Similarity=0.381  Sum_probs=43.6

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       194 rr~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      ||++|+.+||+||++||.||++|+.+||.+|..|+.+|..|+.+..
T Consensus         1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~   46 (61)
T 1t2k_D            1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVT   46 (61)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999999999854

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=99.10  E-value=1.7e-10  Score=83.89  Aligned_cols=49  Identities=33%  Similarity=0.389  Sum_probs=40.7

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          192 IERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEA  240 (249)
Q Consensus       192 ~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e~  240 (249)
                      .++..++..+||+||++||.||++|+.+||.+|..|+.+|..|..+.+.
T Consensus         7 ~d~~~~KR~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~   55 (63)
T 2dgc_A            7 SDPAALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVAR   55 (63)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444455566999999999999999999999999999999999999653

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=99.03  E-value=6e-10  Score=80.22  Aligned_cols=46  Identities=30%  Similarity=0.431  Sum_probs=42.7

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       194 rr~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      |+.||..+||+||++||.||++|+.+||.+|..|+.+|..|..+..
T Consensus         1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~   46 (62)
T 1jnm_A            1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTAN   46 (62)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3578889999999999999999999999999999999999999854

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=98.62  E-value=5.6e-08  Score=70.42  Aligned_cols=46  Identities=28%  Similarity=0.486  Sum_probs=38.0

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          194 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       194 rr~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      |+.+++.+||.||+|+|.||++++.+|+.++..|+.+|..|+.+.+
T Consensus         2 k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~   47 (63)
T 1ci6_A            2 KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERAD   47 (63)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5788899999999999999999999999999999999999998843

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1

Probab=98.36  E-value=1.2e-06  Score=65.12  Aligned_cols=47  Identities=26%  Similarity=0.276  Sum_probs=41.9

Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025678          195 RLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKEAS  241 (249)
Q Consensus       195 r~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e~~  241 (249)
                      ..||+..||.|++..|.||++|+.+||.+|..|+.+|..|..+++..
T Consensus         9 ~~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~~L   55 (70)
T 1gd2_E            9 SSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQL   55 (70)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998888888776643

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=98.35  E-value=1.2e-06  Score=66.35  Aligned_cols=50  Identities=28%  Similarity=0.300  Sum_probs=43.7

Q ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          190 KSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       190 ~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      +.++.-..|..+|.++|++||.++++...+++.++..|+.||..|+.+.+
T Consensus        11 k~d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~   60 (78)
T 1gu4_A           11 KHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVE   60 (78)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33445555678999999999999999999999999999999999999855

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}

Probab=98.30  E-value=1.2e-07  Score=75.79  Aligned_cols=52  Identities=31%  Similarity=0.337  Sum_probs=41.4

Q ss_pred             chhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          186 NAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE  237 (249)
Q Consensus       186 ~~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e  237 (249)
                      ...+...-|.+||.+|||.+|+.||.||.+.+.+||.++..|..+.+.|+.|
T Consensus        29 s~~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~E   80 (107)
T 3a5t_A           29 SKEEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASE   80 (107)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTST
T ss_pred             CHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456667789999999999999999999999999997666665555444444

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=98.29  E-value=1.8e-06  Score=66.61  Aligned_cols=51  Identities=27%  Similarity=0.311  Sum_probs=44.6

Q ss_pred             hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          189 EKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       189 e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      ++.+++-..|..+|.++|++||.++++...+++.++..|+.||..|+.+.+
T Consensus        10 dk~d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~   60 (87)
T 1hjb_A           10 DKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVE   60 (87)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555666778999999999999999999999999999999999999854

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A

Probab=97.94  E-value=4.5e-05  Score=59.15  Aligned_cols=54  Identities=24%  Similarity=0.250  Sum_probs=45.6

Q ss_pred             chhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          186 NAFEKSIERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       186 ~~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      +..+...-|..||-+|||..|+-||.||.....+||.++..|..+.+.|+.++.
T Consensus        19 s~eev~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~   72 (90)
T 2wt7_B           19 TKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVS   72 (90)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345556777888999999999999999999999999988888888777777753

>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1

Probab=96.22  E-value=0.0024  Score=49.58  Aligned_cols=36  Identities=25%  Similarity=0.547  Sum_probs=29.7

Q ss_pred             hhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 025678          187 AFEKSIERRLRRKIKNRESAARSRARKQAYHNELVS  222 (249)
Q Consensus       187 ~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~  222 (249)
                      .......|..||..|||.+|+++|+||.+.+++|+.
T Consensus        55 ~~Ql~~ir~~RRR~KNr~AA~~CRkrK~~~~d~l~~   90 (92)
T 1skn_P           55 EYQRQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH   90 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence            444567888999999999999999999999888764

>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A

Probab=93.03  E-value=0.46  Score=37.45  Aligned_cols=29  Identities=38%  Similarity=0.430  Sum_probs=25.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025678          214 QAYHNELVSKVSRLEEENLKLKKEKEAST  242 (249)
Q Consensus       214 kay~~eLE~~v~~L~~EN~~L~~e~e~~~  242 (249)
                      -+.+.+|+.+|.+|..||+.|+.++++-+
T Consensus        64 ~~~v~eLe~everL~~ENq~L~~e~~~~~   92 (104)
T 3s9g_A           64 DARVRELELELDRLRAENLQLLTENELHR   92 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            57889999999999999999999988643

>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y

Probab=92.73  E-value=0.4  Score=34.18  Aligned_cols=40  Identities=25%  Similarity=0.273  Sum_probs=33.3

Q ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          198 RKIKNRESAARSRARKQAYHNELVSKVSRLEEENLKLKKE  237 (249)
Q Consensus       198 R~ikNReSA~rSR~RKkay~~eLE~~v~~L~~EN~~L~~e  237 (249)
                      ..-|||.+++++|+|=+..++-.-.-.+.-.+||.+|+.-
T Consensus         5 kryknr~asrk~rakfkn~lqh~r~vaaaks~en~rlr~l   44 (63)
T 2c9l_Y            5 KRYKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRLRLL   44 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Confidence            3468999999999999988887777667777899998765

>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}

Probab=92.57  E-value=0.12  Score=34.85  Aligned_cols=24  Identities=38%  Similarity=0.574  Sum_probs=16.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          214 QAYHNELVSKVSRLEEENLKLKKE  237 (249)
Q Consensus       214 kay~~eLE~~v~~L~~EN~~L~~e  237 (249)
                      |+|+.+||.++..|+..|.+|...
T Consensus         2 KaYl~eLE~r~k~le~~naeLEer   25 (42)
T 2oqq_A            2 SAYLSELENRVKDLENKNSELEER   25 (42)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHH
Confidence            578888887777776666665443

>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*

Probab=88.57  E-value=0.58  Score=30.12  Aligned_cols=30  Identities=23%  Similarity=0.226  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-Hhhhhh
Q 025678          216 YHNELVSKVSRLEEENLKLKKEKE-ASTIFL  245 (249)
Q Consensus       216 y~~eLE~~v~~L~~EN~~L~~e~e-~~~~~~  245 (249)
                      +|..||.+|..|-.+|..|..+.+ |..+|+
T Consensus         2 RMnQLE~kVEeLl~~n~~Le~eV~rLk~ll~   32 (34)
T 2oxj_A            2 RMXQLEXKVXELLXKNXHLEXEVXRLKXLVX   32 (34)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence            578999999999999999999955 666654

>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=87.99  E-value=0.049  Score=42.19  Aligned_cols=29  Identities=31%  Similarity=0.389  Sum_probs=23.9

Q ss_pred             hhhhHHHHHHHHHHHhHHHHHHHHHHHHH
Q 025678          187 AFEKSIERRLRRKIKNRESAARSRARKQA  215 (249)
Q Consensus       187 ~~e~~~err~rR~ikNReSA~rSR~RKka  215 (249)
                      ...-...|..||.-|||.+|+++|+||..
T Consensus        59 ~~Ql~lIrdiRRRgKNKvAAqnCRKRKld   87 (91)
T 2kz5_A           59 ESQLALVRDIRRRGKNKVAAQNYRKRKLE   87 (91)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCCCCC
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            34456678899999999999999999853

>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A

Probab=87.65  E-value=0.61  Score=29.89  Aligned_cols=29  Identities=24%  Similarity=0.289  Sum_probs=22.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-Hhhhh
Q 025678          216 YHNELVSKVSRLEEENLKLKKEKE-ASTIF  244 (249)
Q Consensus       216 y~~eLE~~v~~L~~EN~~L~~e~e-~~~~~  244 (249)
                      +|..||.+|..|-.+|..|..|.+ |..+|
T Consensus         1 RM~QLE~kVEeLl~~n~~Le~EV~RLk~Ll   30 (33)
T 3m48_A            1 RMAQLEAKVEELLSKNWNLENEVARLKKLV   30 (33)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CccHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence            367899999999999999999954 55554

>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A

Probab=86.54  E-value=0.63  Score=30.29  Aligned_cols=30  Identities=20%  Similarity=0.163  Sum_probs=24.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHhhhhh
Q 025678          216 YHNELVSKVSRLEEENLKLKKEK-EASTIFL  245 (249)
Q Consensus       216 y~~eLE~~v~~L~~EN~~L~~e~-e~~~~~~  245 (249)
                      +|..||.+|..|..+|..|..+. .|..++.
T Consensus         2 RMnQLE~kVEeLl~~~~~Le~EV~RL~~ll~   32 (36)
T 1kd8_A            2 EVKQLEAEVEEIESEVWHLENEVARLEKENA   32 (36)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence            46789999999999999999984 4766664

>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B

Probab=86.48  E-value=0.93  Score=29.50  Aligned_cols=30  Identities=20%  Similarity=0.142  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-Hhhhhh
Q 025678          216 YHNELVSKVSRLEEENLKLKKEKE-ASTIFL  245 (249)
Q Consensus       216 y~~eLE~~v~~L~~EN~~L~~e~e-~~~~~~  245 (249)
                      +|..||.+|..|-.+|..|..+.+ |..++.
T Consensus         2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~ll~   32 (36)
T 1kd8_B            2 KVKQLKAKVEELKSKLWHLKNKVARLKKKNA   32 (36)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence            578999999999999999999944 666664

>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1

Probab=84.71  E-value=1.2  Score=28.60  Aligned_cols=30  Identities=7%  Similarity=0.133  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-Hhhhhh
Q 025678          216 YHNELVSKVSRLEEENLKLKKEKE-ASTIFL  245 (249)
Q Consensus       216 y~~eLE~~v~~L~~EN~~L~~e~e-~~~~~~  245 (249)
                      +|..||.+|..|-.+|..|..|.+ |..+|.
T Consensus         2 RMnQLEdKVEeLl~~~~~Le~EV~RLk~ll~   32 (34)
T 3c3f_A            2 RMXQIEXKLEXILSXLYHXENEXARIXKLLX   32 (34)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence            578999999999999999999944 666654

>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*

Probab=83.04  E-value=1.6  Score=27.90  Aligned_cols=30  Identities=3%  Similarity=0.122  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-Hhhhhh
Q 025678          216 YHNELVSKVSRLEEENLKLKKEKE-ASTIFL  245 (249)
Q Consensus       216 y~~eLE~~v~~L~~EN~~L~~e~e-~~~~~~  245 (249)
                      +|..||.+|..|-.+|..|..|.+ |..+|.
T Consensus         1 RMnQLEdKvEeLl~~~~~Le~EV~RLk~lL~   31 (33)
T 3c3g_A            1 RMKXIEXKLXEIXSKXYHXENXLARIKXLLX   31 (33)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CccHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence            367899999999999999999844 666654

>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1

Probab=80.59  E-value=1.8  Score=32.49  Aligned_cols=24  Identities=46%  Similarity=0.422  Sum_probs=17.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          214 QAYHNELVSKVSRLEEENLKLKKE  237 (249)
Q Consensus       214 kay~~eLE~~v~~L~~EN~~L~~e  237 (249)
                      |+.|.||+.++.+|+.||.-|+.-
T Consensus        21 Ke~I~EL~e~~~qLE~EN~~Lk~~   44 (78)
T 1dip_A           21 KEQIRELVEKNSQLERENTLLKTL   44 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456777888888888887777653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	249
d1sknp_	74	Skn-1 {Caenorhabditis elegans [TaxId: 6239]}	91.75
d1uklc_	61	SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}	84.6

>d1sknp_ a.37.1.1 (P:) Skn-1 {Caenorhabditis elegans [TaxId: 6239]}

class: All alpha proteins
fold: A DNA-binding domain in eukaryotic transcription factors
superfamily: A DNA-binding domain in eukaryotic transcription factors
family: A DNA-binding domain in eukaryotic transcription factors
domain: Skn-1
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.75  E-value=0.037  Score=39.63  Aligned_cols=29  Identities=31%  Similarity=0.551  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 025678          191 SIERRLRRKIKNRESAARSRARKQAYHNE  219 (249)
Q Consensus       191 ~~err~rR~ikNReSA~rSR~RKkay~~e  219 (249)
                      .--+-.||.=|||.+|+++|+||-...++
T Consensus        45 ~lirDIRRRGKNKvAAqnCRKRKld~~d~   73 (74)
T d1sknp_          45 QLIRKIRRRGKNKVAARTCRQRRTDRHDK   73 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHhcccHHHHHHHHHhhhhhhcc
Confidence            45567889999999999999999876654

>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.60  E-value=0.58  Score=31.12  Aligned_cols=26  Identities=27%  Similarity=0.322  Sum_probs=23.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025678          214 QAYHNELVSKVSRLEEENLKLKKEKE  239 (249)
Q Consensus       214 kay~~eLE~~v~~L~~EN~~L~~e~e  239 (249)
                      -.|+..|+.++..|++||..|+.+.+
T Consensus        32 i~YI~~Lq~~~~~L~~e~~~L~~~~~   57 (61)
T d1uklc_          32 IDYIKYLQQVNHKLRQENMVLKLANQ   57 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999998865