Citrus Sinensis ID: 025702

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHcccEEEEEEcccccccccccccccHHHHHccccEEEEEcccccHHHHHHHHHcccccEEEccccccccHHHHHHHHcccccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHcccccccccccccEEEEEEHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHcccccEEEHHHHHHHccHHHHHHHHHcccEEEEEEccHHccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHcccccEEEcccccccEEEEHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHcccccEEEccccccc
Coil and Loop (DISEMBL)
MGGTRFIGVFLSRLLvkeghqvtlftrgkapiaqqlpgesdqEFAEFSSKILhlkgdrkdydfvksslsakgfdvvydingreadevepildalpnleqFIYCssagvylksdllphcetdtvdpksrhkgklntESVLEskgvnwtslrpvyiygplnynpvEEWFFHRlkagrpipipgsgiqvtqlgHVKDLARAFVQVLGNEKASRQVFNIsgekyvtfDGLARACAKVTGYCIagsvehrmpdd
Flexible Loop (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILhlkgdrkdYDFVKsslsakgfdvVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCEtdtvdpksrhkgklntesvleskgvnwtslrpVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGnekasrqvfnisgEKYVTFDGLARACAKVTGYCIAgsvehrmpdd
Low Complexity Region (SEG)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD
Disordered region (IsUnstruct)
****RFIGVFLSRLLVKEGHQVTLFTRGKAPI**************FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET******************LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGS********
Disordered Region (DISOPRED)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGS*E******
Disordered Region (DISEMBL)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ*********AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD***********LNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD
Disordered Region (DISPRO)
*GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHR****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	249	2.2.26 [Sep-21-2011]
Q9SA52	378	Chloroplast stem-loop bin	yes	no	0.947	0.624	0.868	1e-124
Q9LYA9	406	Chloroplast stem-loop bin	no	no	0.923	0.566	0.344	2e-33
Q45291	329	UDP-glucose 4-epimerase O	no	no	0.935	0.708	0.252	3e-06
P33119	328	UDP-glucose 4-epimerase O	yes	no	0.911	0.692	0.247	9e-05
P55579	396	Uncharacterized protein y	yes	no	0.875	0.550	0.228	0.0004
P52577	310	Isoflavone reductase homo	no	no	0.550	0.441	0.275	0.0009

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score =  443 bits (1140), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/236 (86%), Positives = 227/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK  G+
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGF 294

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  142 bits (359), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 128/241 (53%), Gaps = 11/241 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
           GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct: 90  GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
              V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +P
Sbjct: 206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTGYC 237
           IPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA   G  
Sbjct: 263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAGKT 322

Query: 238 I 238
           +
Sbjct: 323 V 323

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.

Arabidopsis thaliana (taxid: 3702)

>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=galE PE=3 SV=2

 Score = 52.4 bits (124), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 116/289 (40%), Gaps = 56/289 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  ++G   + +L++ GH VT+         + +P ++             ++GD  D 
Sbjct: 7   GGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADARL-----------IEGDVND- 54

Query: 62  DFVKSSLSAKGFDVVYDINGRE--ADEVE--------------PILDAL--PNLEQFIYC 103
             V+  LS  GF+ V     R    + VE               +LDA+    +   ++ 
Sbjct: 55  -VVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVNNLVFS 113

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRHKG-KLNTESVLESK----GVNWTSLRPVYI---Y 155
           S+A  Y + D++P  E     P + +   KL+ +  + S     G+  TSLR   +   Y
Sbjct: 114 STAATYGEPDVVPITEDMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAY 173

Query: 156 GPLNYNPVEEWFF----------HRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
           G +  N   E             HR K    G   P P  G  V    H+ DLA+A V  
Sbjct: 174 GNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTP-DGTAVRDYIHILDLAKAHVLA 232

Query: 203 L-GNEKASRQVFNI-SGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
           L  NE    ++FN+ SG+ Y +   +   C +VTG+ I   V  R   D
Sbjct: 233 LESNEAGKHRIFNLGSGDGY-SVKQVVEMCREVTGHPIPAEVAPRRAGD 280

Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2

 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 115/295 (38%), Gaps = 68/295 (23%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLF------TRGKAPIAQQLPGESDQEFAEFSSKILHLK 55
           GG  ++G   S +L+++GH+VT+        R   P+                     ++
Sbjct: 7   GGAGYVGSVCSTVLLEQGHEVTIVDNLTTGNRDAVPLGATF-----------------VE 49

Query: 56  GDRKDYDFVKSSLSAKGFDVVYDINGRE--ADEVE--------------PILDALP--NL 97
           GD K  D   + LS+  FD V     R    + VE               +LDA+   N+
Sbjct: 50  GDIK--DVADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNV 107

Query: 98  EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG-KLNTESVLES----KGVNWTSLRPV 152
              ++ S+A  Y + + +P  E     P + +   KL+ +  + S     G   TSLR  
Sbjct: 108 RNIVFSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYF 167

Query: 153 YI---YGPLNYNPVEEWFF----------HRLKA---GRPIPIPGSGIQVTQLGHVKDLA 196
            +   YG +  N   E             HR K    G   P    G  +    H++DLA
Sbjct: 168 NVAGAYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTE-DGTPIRDYIHIRDLA 226

Query: 197 RAFVQVL-GNEKASRQVFNI-SGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
            A +  L  N + S ++FN+ SGE Y +   +   C +VTG+ I   V  R   D
Sbjct: 227 DAHILALQSNVEGSHRIFNLGSGEGY-SVKQVIDTCREVTGHLIPAEVAPRRAGD 280

Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) (taxid: 257309)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P55579|Y4NG_RHISN Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234) GN=NGR_a02350 PE=4 SV=1

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 27/245 (11%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILH-------L 54
           GG+ + G  LS+ L+++G  V +F           PG S          IL        L
Sbjct: 56  GGSGYFGELLSKQLLRQGTYVRVFDLNP-------PGFSHPNLEFLKGTILDRNAVRQAL 108

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILD--ALPNLEQFIYCSSAGVYLKS 112
            G  K +  V     AK  D+ + +N       + I+D      +E+F+Y SS+ V+   
Sbjct: 109 SGIDKVFHNVAQVPLAKEKDLFWSVN---CGGTQIIVDESVATGIEKFVYTSSSAVFGAP 165

Query: 113 DLLPHCETDTVDP-----KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
              P  E    +P     +++  G++  +  ++  G++   +RP  + G      V +  
Sbjct: 166 KSNPVTEETEPNPAEDYGRAKLAGEIICKEAMQRDGLDVAIVRPRTVLG-YGRQGVVQIL 224

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA 227
           F  ++ G  IP+ G G    Q  H  DLA A +    +       +NI   ++ T   L 
Sbjct: 225 FDWVERGLDIPVLGGGNNKYQFVHSDDLASACIAA--SNVKGFATYNIGAAEFGTMRELL 282

Query: 228 RACAK 232
           +   K
Sbjct: 283 QVVIK 287

Putative nucleotide sugar epimerase/dehydrogenase.

Rhizobium sp. (strain NGR234) (taxid: 394)

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 12/149 (8%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           +GGT +IG FL     K GH      R +A ++  + G++ Q F +    ILH  GD  D
Sbjct: 11  IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
           ++ +  ++  K  DVV    G        ILD    +       +   +L S+     + 
Sbjct: 68  HESLVKAI--KQVDVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGVDVDR 120

Query: 120 TDTVDP-KSRHKGKLNTESVLESKGVNWT 147
           T  V+P KS   GK+     +E++G+ +T
Sbjct: 121 TSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
255542956	381	NAD dependent epimerase/dehydratase, put	0.947	0.619	0.902	1e-125
363806740	378	uncharacterized protein LOC100791076 [Gl	0.947	0.624	0.889	1e-125
356572914	378	PREDICTED: uncharacterized protein At1g0	0.947	0.624	0.889	1e-124
388497252	378	unknown [Medicago truncatula]	0.947	0.624	0.894	1e-123
312282041	379	unnamed protein product [Thellungiella h	0.947	0.622	0.877	1e-123
118489564	380	unknown [Populus trichocarpa x Populus d	0.947	0.621	0.885	1e-123
388512335	378	unknown [Medicago truncatula]	0.947	0.624	0.889	1e-123
224124986	380	predicted protein [Populus trichocarpa]	0.947	0.621	0.885	1e-122
118487652	380	unknown [Populus trichocarpa]	0.947	0.621	0.885	1e-122
15217485	378	RNA binding protein [Arabidopsis thalian	0.947	0.624	0.868	1e-122

>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/236 (90%), Positives = 226/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q+LPGESDQ++A+FSSK+LHLKGDRKD
Sbjct: 61  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKD 120

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSAKGFDVVYDINGREADEV PILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 121 FDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLLPHSEK 180

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLARACAK  G+
Sbjct: 241 NSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGF 296

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max] gi|255647108|gb|ACU24022.1| unknown [Glycine max]

 Score =  452 bits (1162), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/236 (88%), Positives = 228/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L++KGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
           GSGIQ+TQLGHVKDLA+AF+QV GNEKAS++VFNISG+K+VTFDGLARACAK  G+
Sbjct: 239 GSGIQITQLGHVKDLAKAFIQVFGNEKASKEVFNISGDKHVTFDGLARACAKAGGF 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like [Glycine max]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/236 (88%), Positives = 227/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+ QQLPGESD ++A+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           +DFVKSSLSA+GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPH ET
Sbjct: 119 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAET 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+++GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SG+Q+TQLGHVKDLA AF+QVLGNEKAS++VFNISGEKYVTFDGLARACAK  G+
Sbjct: 239 SSGLQITQLGHVKDLATAFIQVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGF 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/236 (89%), Positives = 225/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARACAK  G+
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACAKAGGF 294

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/236 (87%), Positives = 227/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPI+DALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEV 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKY+TFDGLARACAK  G+
Sbjct: 239 NSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGF 294

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 209/236 (88%), Positives = 226/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI QQLPGESDQ++++FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK  G+
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGF 295

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula]

 Score =  445 bits (1144), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/236 (88%), Positives = 224/236 (94%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSR LVKEGHQVTLFTRGKAPI QQLPGESD +FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPILDALPNLEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEI 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
           GSGIQ+TQLGHVKDLA AF++VLGNEKAS+Q+FNISG+KYVTFDGLARAC K  G+
Sbjct: 239 GSGIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACVKAGGF 294

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/236 (88%), Positives = 225/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK  G+
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGF 295

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/236 (88%), Positives = 225/236 (95%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI Q LPGESDQ++A+FSSKILHLKGDRKD
Sbjct: 60  MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKD 119

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           ++FVK+SL+AKGFDVVYDINGREA EVEPILDALP LEQFIYCSSAGVYLKSDLLPH E 
Sbjct: 120 FEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEK 179

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+LES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 180 DAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 239

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ+TQLGHVKDLA+AF+QVLGNEKAS+QVFNISGEKYVTFDGLA+ACAK  G+
Sbjct: 240 NSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGF 295

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic; Short=CSP41-b; AltName: Full=Heteroglycan-interacting protein 1.3; AltName: Full=Protein CHLOROPLAST RNA BINDING; AltName: Full=Protein Gb5f; Flags: Precursor gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana] gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767 come from this gene [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana] gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/236 (86%), Positives = 227/236 (96%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59  MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
           YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
           D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK  G+
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGF 294

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.947	0.624	0.868	1.5e-113
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.911	0.559	0.348	6.7e-33
TIGR_CMR|GSU_0385	294	GSU_0385 "NADH dehydrogenase s	0.417	0.353	0.268	1.1e-05
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.534	0.429	0.287	5.4e-05
UNIPROTKB|Q81JK7	292	BA_5697 "Uncharacterized prote	0.385	0.328	0.318	0.00018
TIGR_CMR|BA_5697	292	BA_5697 "conserved hypothetica	0.385	0.328	0.318	0.00018
UNIPROTKB|Q83DM2	301	CBU_0681 "NAD dependent epimer	0.550	0.455	0.287	0.00025
TIGR_CMR|CBU_0681	301	CBU_0681 "conserved hypothetic	0.550	0.455	0.287	0.00025
UNIPROTKB|Q71YS4	291	LMOf2365_1769 "Putative unchar	0.377	0.323	0.330	0.00031
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.706	0.553	0.266	0.00037

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
 Identities = 205/236 (86%), Positives = 227/236 (96%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct:    59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
             YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE 
Sbjct:   119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178

Query:   121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
             D VDPKSRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct:   179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238

Query:   181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
              SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAK  G+
Sbjct:   239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGF 294

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 83/238 (34%), Positives = 127/238 (53%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
             GG   IG + ++ L+  GH VT+ T G    ++++       F+E  S     + G+  +
Sbjct:    90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
                V + +  + FDVV D NG++ D V P++D   +  ++QF++ SSAG+Y  ++  PH 
Sbjct:   149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205

Query:   119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
             E D V   + H   +  E  L     NW S RP Y+ G  N    EEWFF R+   R +P
Sbjct:   206 EGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVP 262

Query:   179 IPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTG 235
             IPGSG+Q+T + HV+DL+      + N E AS  +FN   ++ VT DG+A+ CA   G
Sbjct:   263 IPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG 320

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TIGR_CMR|GSU_0385 GSU_0385 "NADH dehydrogenase subunit, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 108 (43.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 29/108 (26%), Positives = 47/108 (43%)

Query:   129 HKGKLNTESVLESKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVT 187
             H+ K   E V+    ++WT  RP  I+GP   +  +   F  R  A   +P+ G G    
Sbjct:   122 HRTKWRAEEVVRQSELDWTIFRPSLIFGPKGAFVDMLAGFVRRFPA---VPVVGDGTYRL 178

Query:   188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
             Q   V D+AR F   L   +   Q + + G   +T++ +     +V G
Sbjct:   179 QPVSVDDVARCFALALDMPETFGQTYELCGPDRLTYNEVLDIIGRVLG 226

GO:0003954 "NADH dehydrogenase activity" evidence=ISS

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=ISS

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 5.4e-05, P = 5.4e-05
 Identities = 44/153 (28%), Positives = 75/153 (49%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT +IG FL     K GH      R +A ++  + G++ Q F +    ILH  GD  D
Sbjct:    11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYLKSDLL 115
             ++ +  ++  K  DVV    G  +  D+ + I+ A+    N+++F+  S  GV +     
Sbjct:    68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVD---- 119

Query:   116 PHCETDTVDP-KSRHKGKLNTESVLESKGVNWT 147
                 T  V+P KS   GK+     +E++G+ +T
Sbjct:   120 ---RTSAVEPAKSAFAGKIQIRRTIEAEGIPYT 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

UNIPROTKB|Q81JK7 BA_5697 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)]

 Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_5697 BA_5697 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
 Identities = 35/110 (31%), Positives = 52/110 (47%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGTRF G  L   L+K+GH VT+ TRG   I +            F   +  L  DR+D
Sbjct:     9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
                + S L  K +D+VYD     ++  + + + L     ++I  SS  VY
Sbjct:    56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q83DM2 CBU_0681 "NAD dependent epimerase/dehydratase family" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
 Identities = 44/153 (28%), Positives = 69/153 (45%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKVTGYCIA 239
             + SR V NI+  + ++F  LA    +++   +A
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVA 247

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CBU_0681 CBU_0681 "conserved hypothetical protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
 Identities = 44/153 (28%), Positives = 69/153 (45%)

Query:    97 LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRP 151
             ++Q IY SS  VY  SD  P  ET    P S H       ++  +SV     ++   LRP
Sbjct:   101 IQQVIYISSDAVYADSDQ-PLTETSVTAPTSLHGVMHLAREMMLQSVCSENNISLAILRP 159

Query:   152 VYIYG---PLN-YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
               +YG   P N Y P     F RL      I + G G +     ++ D+A    +V+  +
Sbjct:   160 SLLYGAEDPHNGYGPNR---FRRLADNHESIILFGEGEEQRDHVYIDDVAEIITRVI--Q 214

Query:   207 KASRQVFNISGEKYVTFDGLARACAKVTGYCIA 239
             + SR V NI+  + ++F  LA    +++   +A
Sbjct:   215 RCSRGVLNIATGQVISFKQLAEKVVQLSNNEVA 247

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q71YS4 LMOf2365_1769 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 113 (44.8 bits), Expect = 0.00031, P = 0.00031
 Identities = 36/109 (33%), Positives = 55/109 (50%)

Query:     2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
             GGTRF G  L   LV EGH+VT+ TRGK          ++  F +   +++ L  + +D 
Sbjct:     7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55

Query:    62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY 109
              F    L+ + +DV+YD       E    +DA    ++++IY SS  VY
Sbjct:    56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVY 101

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 0.00037, P = 0.00037
 Identities = 52/195 (26%), Positives = 85/195 (43%)

Query:     1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
             +GGT  IG  +    VK GH      R +A ++    G++ Q F +F   +LH  GD  D
Sbjct:    11 IGGTGHIGKLIIEASVKAGHSTLALVR-EASLSDPNKGKTVQNFKDFGVTLLH--GDLND 67

Query:    61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDL-LPHCE 119
             ++ +  ++  K  DVV    G        ILD    +       +   +L S+  +   +
Sbjct:    68 HESLVKAI--KQADVVISTVGSMQ-----ILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120

Query:   120 TDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
             +  V+P KS    KL T   +E++G+ +T L   Y  G   Y P       +L+ G   P
Sbjct:   121 SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAG--YYLPT----LVQLEPGLTSP 174

Query:   179 IPGSGIQVTQLGHVK 193
              P   +++   G+VK
Sbjct:   175 -PRDKVKIFGDGNVK 188

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SA52	CP41B_ARATH	No assigned EC number	0.8686	0.9477	0.6243	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	249
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	1e-142
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-91
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	8e-23
cd08946	200	cd08946, SDR_e, extended (e) SDRs	4e-22
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-19
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-17
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	1e-15
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	4e-14
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	3e-11
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-10
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-10
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	6e-10
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-09
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	7e-09
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	9e-09
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-08
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-08
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	9e-08
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-07
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	5e-07
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	1e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	2e-06
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	2e-06
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-05
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	6e-05
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	6e-05
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	7e-05
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	1e-04
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	2e-04
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	3e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	0.001
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.002
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	0.002
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	0.002
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	0.002
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.003
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	0.003
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	0.004
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	0.004

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  403 bits (1037), Expect = e-142
 Identities = 135/237 (56%), Positives = 165/237 (69%), Gaps = 10/237 (4%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           GG  FIG +L++ LVK GH+VTLFTRGK P +Q++  E    F+E SS  +  + GD  D
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWGDPAD 121

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHC 118
              VKS ++  GFDVVYD NG++ DEVEP+ D    P L+QF++CSSAGVY KSD  PH 
Sbjct: 122 ---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHV 178

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           E D V PK+   G L  E+ L+  GVNWTS RP YIYGP N    EEWFF RL  GRP+P
Sbjct: 179 EGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVP 235

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           IPGSGIQ+TQLGHVKDLA  F  V+GN KA+ Q+FNI  ++ VTFDG+A+ACAK  G
Sbjct: 236 IPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAG 292

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  269 bits (691), Expect = 1e-91
 Identities = 99/245 (40%), Positives = 127/245 (51%), Gaps = 23/245 (9%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           +GGTRFIG  L   L+  GH VT+F RG+                     + H+ GDR D
Sbjct: 6   IGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD-------------LPEGVEHIVGDRND 52

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDAL-PNLEQFIYCSSAGVYLKS-----DL 114
            D ++  L  + FDVV D       +VE  LDA    ++Q+I+ SSA VYLK      + 
Sbjct: 53  RDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQYIFISSASVYLKPGRVITES 112

Query: 115 LPHCETDTV---DPKSRHKGKLNTESVLESK-GVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            P  E D V   DP    +GK   E VL       +T +RP YIYGP +Y     +FF R
Sbjct: 113 TPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDR 172

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
           L  GRPI +PG G  + Q  HVKDLARA +   GN KA   +FNI+G++ VT+D L  AC
Sbjct: 173 LARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEAC 232

Query: 231 AKVTG 235
           AK  G
Sbjct: 233 AKALG 237

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 94.2 bits (234), Expect = 8e-23
 Identities = 62/268 (23%), Positives = 88/268 (32%), Gaps = 47/268 (17%)

Query: 1   MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
            GG  FIG  L   L+  GH V    R +  +   L G                  D  D
Sbjct: 6   TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVV------------LDLTD 53

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            D V         D V       +  +++  +P      N+               ++F+
Sbjct: 54  RDLVDELAKGVP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112

Query: 102 YCSSAGVYLKSDLLPHCETDTVDPKSR---HKGKLNTESVLES----KGVNWTSLRPVYI 154
           + SS  V          + D   P+        KL  E +L +     G+    LRP  +
Sbjct: 113 FASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172

Query: 155 YGPLNYNPVEEWFFHRL-----KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
           YGP +   +             K    I I G G Q     +V D+A A +  L  E   
Sbjct: 173 YGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL--ENPD 230

Query: 210 RQVFNI-SGEKYVTFDGLARACAKVTGY 236
             VFNI SG   +T   LA A A+  G 
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGS 258

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 90.1 bits (224), Expect = 4e-22
 Identities = 60/225 (26%), Positives = 85/225 (37%), Gaps = 39/225 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L R L++ GH+V +  R                       ++HL       
Sbjct: 5   GGAGFIGSHLVRRLLERGHEVVVIDRLDV--------------------VVHLAALVGV- 43

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCE 119
                  S    D  ++ N         +L+A     +++F+Y SSA VY   + LP  E
Sbjct: 44  -----PASWDNPDEDFETN---VVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEE 95

Query: 120 TDTVDPKS-RHKGKLNTESVLES----KGVNWTSLRPVYIYGP---LNYNPVEEWFFHRL 171
                P S     KL  E +L S     G+    LR   +YGP      + V   F  R 
Sbjct: 96  ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRA 155

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
             G+P+ + G G Q     HV D+ RA +  L N      V+NI 
Sbjct: 156 LEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 83.1 bits (206), Expect = 3e-19
 Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 40/241 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L R L++EG++V +  R +   +                 I   +GD  D 
Sbjct: 5   GGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------IRFHEGDLTDP 52

Query: 62  DFVKSSLSAKGFDVVY--------DINGREADE--------VEPILDALP--NLEQFIYC 103
           D ++  L+    D V           +  +  +           +L+A     +++F++ 
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFA 112

Query: 104 SSAGVYLKSDLLPHCETDTVDPKS---RHK--GKLNTESVLESKGVNWTSLRPVYIYGPL 158
           SS+ VY      P  E   + P S     K   +   E+   + G+    LR   +YGP 
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172

Query: 159 NYNPVEE----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 214
           N +P           R+  G+PI + G G Q     +V D+ARA +  L +      ++N
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGE-IYN 231

Query: 215 I 215
           I
Sbjct: 232 I 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 79.7 bits (197), Expect = 2e-17
 Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 48/250 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG QV +F R   P    L G       ++       KGD ++ 
Sbjct: 6   GGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGG------VDYI------KGDYENR 53

Query: 62  DFVKSSLSAKG--FDVVYDINGREADEVEPILDALPNL---------------EQFIYCS 104
             ++S+L        +    N   +    PILD   N+                + I+ S
Sbjct: 54  ADLESALVGIDTVIHLASTTNPATS-NKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 105 SAG-VYLKSDLLPHCETDTVDPKSRHK-GKLNTESVLE----SKGVNWTSLRPVYIYGPL 158
           S G VY   + LP  E+D   P S +   KL  E  L       G+++T LR    YGP 
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPG 172

Query: 159 NYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ 211
                     P+     +++  G PI I G G  +    ++ DL  A + +L ++     
Sbjct: 173 QRPDGKQGVIPI---ALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLEE- 228

Query: 212 VFNI-SGEKY 220
           VFNI SG  Y
Sbjct: 229 VFNIGSGIGY 238

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 61/218 (27%), Positives = 83/218 (38%), Gaps = 27/218 (12%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           ++G  L+R L+ +G QVT  TR    +A   P       A+     L   G   D D + 
Sbjct: 8   YLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAAD-----LTQPGLLADVDHLV 62

Query: 66  SSLSAKGFDVVYDINGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPHC-ETD 121
            SL            G     +  +LDAL   P +++ IY SS GVY   D      +  
Sbjct: 63  ISLPPPA----GSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVY--GDQQGEWVDET 116

Query: 122 TVDPKSRHKGK--LNTESVLESKG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
           +    S   G+  L  E  L + G    T LR   IYGP   +P+      RL  G    
Sbjct: 117 SPPNPSTESGRALLEAEQALLALGSKPTTILRLAGIYGP-GRHPLR-----RLAQG--TG 168

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            P +G   T   HV DL  A    L        V+N+ 
Sbjct: 169 RPPAGNAPTNRIHVDDLVGALAFALQRPAPGP-VYNVV 205

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 56/253 (22%), Positives = 96/253 (37%), Gaps = 47/253 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKD 60
           G T FIG ++   L K G QV +  R +A   + L  G+  Q        +L ++ D +D
Sbjct: 7   GATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQ--------VLFVEFDLRD 58

Query: 61  YDFVKSSLSAKGFDVVYDINGRE----ADEVEPILDALP----------NLEQFIYCSSA 106
            + ++ +L  +G DVV ++ GR         E +    P           +E+ I+ S+ 
Sbjct: 59  DESIRKAL--EGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHISAL 116

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEW 166
           G             D   P    + K   E  +       T +RP  ++G  +       
Sbjct: 117 GA------------DANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDR------ 158

Query: 167 FFHRLKAGR---P-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           F +R        P  P+ G G    Q  +V D+A A  + L + +   + + + G K  T
Sbjct: 159 FLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGPKVYT 218

Query: 223 FDGLARACAKVTG 235
              L     ++ G
Sbjct: 219 LAELVELLRRLGG 231

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 60.0 bits (146), Expect = 3e-11
 Identities = 44/208 (21%), Positives = 72/208 (34%), Gaps = 38/208 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L + L+  GHQVT  +R  +                 +  +  ++ D  D 
Sbjct: 5   GATGKTGRRLVKELLARGHQVTALSRNPSKAP--------------APGVTPVQKDLFDL 50

Query: 62  DFVKSSLSAKGFDVVYD-INGREADE--VEPILDALPNL--EQFIYCSSAGVY-LKSDLL 115
             +  +L   G D V D    R  D   V+ +LDA       + +  S+AG+Y  +    
Sbjct: 51  ADLAEAL--AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTF 108

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
              +     P +R K     E +L + G++WT +RP  ++        E           
Sbjct: 109 RLDDAPLFPPYARAKAAA--EELLRASGLDWTIVRPGALFDE-EGETYEIGTEGDPAGES 165

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVL 203
            I                D+A A +  L
Sbjct: 166 SI-------------SRADVAAALLDEL 180

Length = 182

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 71/291 (24%), Positives = 106/291 (36%), Gaps = 63/291 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   L++ GH+V +    + GK    + LP        E    +  ++GD 
Sbjct: 6   GGAGFIGSHLVERLLERGHEVIVLDNLSTGKK---ENLP--------EVKPNVKFIEGDI 54

Query: 59  KDYDFVKSSLS--------AKGFDVVYDINGREADEVEPILDALPN-------------- 96
           +D + V+ +          A    V   I        +PI D   N              
Sbjct: 55  RDDELVEFAFEGVDYVFHQAAQASVPRSIE-------DPIKDHEVNVLGTLNLLEAARKA 107

Query: 97  -LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-GKLNTESVL----ESKGVNWTSLR 150
            +++F+Y SS+ VY     LP  E    +P S +   K   E          G+   SLR
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLR 167

Query: 151 PVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN 205
              +YGP       Y  V   F  R   G P  I G G Q     +V+D+  A +     
Sbjct: 168 YFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAA-T 226

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKVTGYCI--------AGSVEHRMPD 248
             A  +V+NI   K  + + LA    ++ G  +         G V H + D
Sbjct: 227 AGAGGEVYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVRHSLAD 277

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 64/265 (24%), Positives = 102/265 (38%), Gaps = 44/265 (16%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GG+ F G  L + L++  G  V  F       A       + EF         LKGD  D
Sbjct: 6   GGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEF---------LKGDITD 56

Query: 61  YDFVKSSLSAKGFDVVYDI-------NGRE-ADEV-----EPILDALP--NLEQFIYCSS 105
            + V+ +LS  G D V+           R+   EV     + +LDA     +++F+Y SS
Sbjct: 57  RNDVEQALS--GADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSS 114

Query: 106 AGVYLKSDL-------LPHCETDTVDPKSRHKGKLNTESVLESKGVN---WTSLRPVYIY 155
           + V             LP+   D+ D  +  K  +    VLE+ G +     +LRP  I+
Sbjct: 115 SSVIFGGQNIHNGDETLPYPPLDS-DMYAETK-AIAEIIVLEANGRDDLLTCALRPAGIF 172

Query: 156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV----LGNEKASRQ 211
           GP     +    F   + G    + G G  +    +V +LA A +      +  +  S Q
Sbjct: 173 GP-GDQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISGQ 231

Query: 212 VFNISGEKYVTFDGLARACAKVTGY 236
            + I+  +      L R   K  G+
Sbjct: 232 TYFITDAEPHNMFELLRPVWKALGF 256

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 57.7 bits (140), Expect = 6e-10
 Identities = 52/245 (21%), Positives = 88/245 (35%), Gaps = 48/245 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  +  LL+ +   V    R           E  + FA    ++        DY
Sbjct: 5   GATGKLGTAVVELLLAKVASVVALVRN---------PEKAKAFAADGVEVRQG-----DY 50

Query: 62  DFVKSSLSA-KGFDVVY----DINGREADEVEPILDALPNLEQFIYCSSAGV----YLKS 112
           D  ++   A +G D +             + +  +DA            AGV    YL  
Sbjct: 51  DDPETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDA---------AKQAGVKHIVYLS- 100

Query: 113 DLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK 172
                 + D+    +R  G   TE  LE+ G+ +T LRP +    L      E+    L+
Sbjct: 101 --ASGADEDSPFLLARDHGA--TEKYLEASGIPYTILRPGWFMDNLL-----EFLPSILE 151

Query: 173 AGRPIPIPGSGIQVTQLGHV--KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC 230
            G      G G     +  V  +D+A A    L       +V+N++G + +++  LA   
Sbjct: 152 EGTIYGPAGDGK----VAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPEALSYAELAAIL 207

Query: 231 AKVTG 235
           ++  G
Sbjct: 208 SEALG 212

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 50/240 (20%), Positives = 77/240 (32%), Gaps = 33/240 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T F+G  + R L+  GH+V    R     A  L G  +    +    K L       D
Sbjct: 7   GATGFVGGAVVRELLARGHEVRAAVRNPEA-AAALAGGVEVVLGDLRDPKSLVAGAKGVD 65

Query: 61  YDFVKSSLSAKG-----FDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 115
              + S L           V   +   EA        A   ++  +  S  G        
Sbjct: 66  GVLLISGLLDGSDAFRAVQVTAVVRAAEA--------AGAGVKHGVSLSVLGA------- 110

Query: 116 PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 175
                D   P +  + K   E+ L S G+ +T+LR    Y          +      AG 
Sbjct: 111 -----DAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIEAAEAAGL 161

Query: 176 PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           P+   G G        V D+A A    L     + + + ++G + +T   LA       G
Sbjct: 162 PVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIG 219

Length = 275

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 54.9 bits (133), Expect = 7e-09
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 11/112 (9%)

Query: 136 ESVLESKGVNWTSLRPVYIYGP-LNYNPVEEWF-------FHRLKA--GRPIPIPGSGIQ 185
           E+  +  G ++ S+ P  +YGP  N++P            FH  K   G+ + + GSG  
Sbjct: 144 EAYRKQYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTP 203

Query: 186 VTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYC 237
             +  +  DLARA V +L N      + N+     ++   LA A A+V G+ 
Sbjct: 204 RREFLYSDDLARAIVFLLENY-DEPIIVNVGSGVEISIRELAEAIAEVVGFK 254

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 54.6 bits (132), Expect = 9e-09
 Identities = 54/262 (20%), Positives = 88/262 (33%), Gaps = 60/262 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L++EGH+V       +  +  L   +  +   F      + GD +D 
Sbjct: 6   GADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHF------ISGDVRDA 59

Query: 62  DFVKSSLSAKGFDVVY---------DINGREADEVEPIL--DALP-------NLEQFIYC 103
             V+  +  K  DVV+                  VE  +               ++ ++ 
Sbjct: 60  SEVEYLV--KKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 104 SSAGVYLKSDLLPHCETDTVD-------PKSRHKGKLN--TESVLESKGVNWTSLRPVYI 154
           S++ VY  +  +P  E   +        P S  K   +    S   S G+  T +RP   
Sbjct: 118 STSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177

Query: 155 YGPLNYNPVEEWFFHRLKAGRPIPIP-------------GSGIQVTQLGHVKDLARAFVQ 201
           YGP            R  A   IP               G G        VKD AR F+ 
Sbjct: 178 YGP------------RQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFID 225

Query: 202 VLGNEKASRQVFNISGEKYVTF 223
           +L   +A  ++ N    + ++ 
Sbjct: 226 ILDAIEAVGEIINNGSGEEISI 247

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 38/227 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDR 58
           G T  +G  + R L+  G+QV    R  +   +     ++    +     S    L+G  
Sbjct: 6   GATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEG-- 63

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADE--VEPILDALP--NLEQFIYCSSAGVYLKSDL 114
              D V S+  + G            D      ++DA     +++F+  SS G    S  
Sbjct: 64  --IDAVISAAGSGGKG---GPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHP 118

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           L                K   E  L + G+++T +RP    G L  +P           G
Sbjct: 119 LEA-------LGPYLDAKRKAEDYLRASGLDYTIVRP----GGLTDDPAGTGRVVLGGDG 167

Query: 175 RPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
             +  PI  +           D+A    + L    A  + F + G  
Sbjct: 168 TRLDGPISRA-----------DVAEVLAEALDTPAAIGKTFELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 29/167 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG  L+R L+++GH+VTL  R           + DQE           +GD +D 
Sbjct: 5   GATGFIGRALARELLEQGHEVTLLVRNTKR-----LSKEDQEPVAVV------EGDLRDL 53

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-----ILDALP--NLEQFIYCSSAGVY 109
           D +  ++  +G DVV        + R+  EV+      +L+A     ++ FI+ SS G Y
Sbjct: 54  DSLSDAV--QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAY 111

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYG 156
              DL    E     P    K K  TE+VL    + +T +RP  IYG
Sbjct: 112 --GDLHEETEPSPSSPYLAVKAK--TEAVLREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 51.5 bits (124), Expect = 9e-08
 Identities = 55/260 (21%), Positives = 98/260 (37%), Gaps = 46/260 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T F+G  L R L+ +G++V    R  +  A  L G    E  E         GD  D 
Sbjct: 5   GATGFLGSNLVRALLAQGYRVRALVRSGSD-AVLLDGL-PVEVVE---------GDLTDA 53

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPI-LDALPNL---------EQFIYCSS 105
             + +++  KG D V+       +  ++  E+    ++   N+          + ++ SS
Sbjct: 54  ASLAAAM--KGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 106 AGVY------LKSDLLPHCETDTVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGP 157
                        +  P  E    +   R K  L    VLE  ++G++   + P  ++GP
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSK-LLAELEVLEAAAEGLDVVIVNPSAVFGP 170

Query: 158 LNYNPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKASR-QVFNI 215
            +  P              +P  P  G        V+D+A   +  +  EK  R + + +
Sbjct: 171 GDEGPTSTGLDVLDYLNGKLPAYPPGGTSFV---DVRDVAEGHIAAM--EKGRRGERYIL 225

Query: 216 SGEKYVTFDGLARACAKVTG 235
            GE  ++F  L    A++TG
Sbjct: 226 GGE-NLSFKQLFETLAEITG 244

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 59/261 (22%), Positives = 87/261 (33%), Gaps = 57/261 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+  G +V +  R           E     AE               
Sbjct: 6   GANGFIGRALVDKLLSRGEEVRIAVR------NAENAEPSVVLAELP------------- 46

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP-----NLE---------------QFI 101
           D    +    G D V  +  R     +   D L      N E               +F+
Sbjct: 47  DIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFV 106

Query: 102 YCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
           + SS  V  +  +  P  ETD   P+  + + KL  E  L     S G+    LRP  +Y
Sbjct: 107 FLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMVY 166

Query: 156 GP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
           GP    N+  +       +  G P+P PG+      L  + +L  A    +   KA+   
Sbjct: 167 GPGVRGNFARLMRL----IDRGLPLP-PGAVKNRRSLVSLDNLVDAIYLCISLPKAANGT 221

Query: 213 FNISGEKYVT----FDGLARA 229
           F +S    V+     D + RA
Sbjct: 222 FLVSDGPPVSTAELVDEIRRA 242

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 51/251 (20%), Positives = 86/251 (34%), Gaps = 39/251 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKD 60
           G T FIG  + R LV  GH+V    R            SD   A+  +      +GD +D
Sbjct: 7   GATGFIGSAVVRELVAAGHEVVGLAR------------SDAGAAKLEAAGAQVHRGDLED 54

Query: 61  YDFVKSSLSAK------GFDVVYDINGREADE----VEPILDALPNLEQ-FIYCSSAGVY 109
            D ++ + +         F   +D   +  +     +E + +AL    +  IY S   + 
Sbjct: 55  LDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTGKPLIYTSGIWLL 114

Query: 110 LKSDLLPHCETDTVDPKS---RHKGKLNTESVLESKGVNWTSLR-PVYIYGPLNYNPVEE 165
             +      E    DP +   R   +      L  +GV  + +R P     P+ +   + 
Sbjct: 115 GPTGGQEEDEEAPDDPPTPAARAVSEAAALE-LAERGVRASVVRLP-----PVVHGRGDH 168

Query: 166 WFF----HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221
            F        +        G G       H  D AR +   L   KA   V++   E+ +
Sbjct: 169 GFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKA-GSVYHAVAEEGI 227

Query: 222 TFDGLARACAK 232
               +A A  +
Sbjct: 228 PVKDIAEAIGR 238

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 46/235 (19%), Positives = 89/235 (37%), Gaps = 40/235 (17%)

Query: 14  LLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG 72
           LL   G +V   TR   +P A+ L     +            +GD  D + ++++L  KG
Sbjct: 18  LLKDPGFKVRALTRDPSSPAAKALAAPGVEVV----------QGDLDDPESLEAAL--KG 65

Query: 73  FDVVY----DINGREADEVE---PILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTV 123
              V+           DE+     ++DA     ++ F++ S   V   +  +PH      
Sbjct: 66  VYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVPH------ 119

Query: 124 DPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGS 182
                   K   E  + + G+  T LRP +       N +      +++ G   + +P  
Sbjct: 120 -----FDSKAEVEEYIRASGLPATILRPAFFM----ENFLTPPAPQKMEDGTLTLVLPLD 170

Query: 183 GIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKVTGY 236
                 +  V D+  A   +  +  K + +   ++G++  T + +A A +KV G 
Sbjct: 171 PDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELAGDEL-TPEEIAAAFSKVLGK 224

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 57/254 (22%), Positives = 95/254 (37%), Gaps = 39/254 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G +  IG  ++R L + G  V L +R G       LPG   +  A           D  D
Sbjct: 6   GASGPIGREVARELRRRGWDVRLVSRSGSKL--AWLPG--VEIVA----------ADAMD 51

Query: 61  YDFVKSSLSAKGFDVVYDING----READEVEPILD-----ALPNLEQFIYCSSAGVYLK 111
              V +  +A+G DV+Y        R  +   P+++     A  N  + +   +  +Y  
Sbjct: 52  ASSVIA--AARGADVIYHCANPAYTRWEELFPPLMENVVAAAEANGAKLVLPGNVYMYGP 109

Query: 112 SDLLPHCETDTVDPKSRHKGKLN---TESVLES---KGVNWTSLRPVYIYGPLNYNPVEE 165
               P  E     P +R KG++     E +L +     +    +R    YGP   N    
Sbjct: 110 QAGSPITEDTPFQPTTR-KGRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGAINS--- 165

Query: 166 WFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT 222
           W    L A   G+    PG+     +  ++ D+ARA V +     A  + +++ G   +T
Sbjct: 166 WLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDAFGEAWHLPGAGAIT 225

Query: 223 FDGLARACAKVTGY 236
              L    A+  G 
Sbjct: 226 TRELIAIAARAAGR 239

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 47/242 (19%), Positives = 73/242 (30%), Gaps = 68/242 (28%)

Query: 2   GGTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G T   G      +V+E    GH+VT   R  A +                 K+  ++GD
Sbjct: 6   GATGRTG----SAIVREALARGHEVTALVRDPAKL------------PAEHEKLKVVQGD 49

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEP---------ILDALPNLE--QFIYCSSA 106
             D + VK +L  +G D V    G   D             I+ A+      + I    A
Sbjct: 50  VLDLEDVKEAL--EGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107

Query: 107 GVYLKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTSLRP----------VY 153
           G       +       + P +  +   +      VL   G++WT++RP           Y
Sbjct: 108 GSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGATGGY 167

Query: 154 IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
               L  +                   GS I         DLA   +  L   +  R+  
Sbjct: 168 YRVELLVDAK----------------GGSRIS------RADLAIFMLDELETPEHVRKRP 205

Query: 214 NI 215
            I
Sbjct: 206 TI 207

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 35/144 (24%), Positives = 52/144 (36%), Gaps = 17/144 (11%)

Query: 97  LEQFIYCSSAGVY--LKSDLLPHCETDTVDPKSRHKG---KLNTESVLES-----KGVNW 146
           + + +  SS  VY     +  P  E   +           K   E +L         +N 
Sbjct: 102 VPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNV 161

Query: 147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE 206
           T LRP  I GP   N      F    + R +P+PG      Q  H  D+ARA   VL   
Sbjct: 162 TVLRPATILGPGTRN--TTRDF---LSPRRLPVPGGFDPPFQFLHEDDVARAL--VLAVR 214

Query: 207 KASRQVFNISGEKYVTFDGLARAC 230
             +  +FN++G+  V    +    
Sbjct: 215 AGATGIFNVAGDGPVPLSLVLALL 238

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 42.9 bits (102), Expect = 6e-05
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 140 ESKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 195
            + G+     R    YGP  +     P+   F      G+P+PI G G+ V    +V+D 
Sbjct: 166 RTYGLPVVITRCSNNYGPYQFPEKLIPL---FILNALDGKPLPIYGDGLNVRDWLYVEDH 222

Query: 196 ARAFVQVLGNEKASRQVFNISGE 218
           ARA   VL  +    +++NI G 
Sbjct: 223 ARAIELVL-EKGRVGEIYNIGGG 244

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 66/270 (24%), Positives = 104/270 (38%), Gaps = 37/270 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGES------------DQEFAE 46
           GG   IG  L   L++ GHQV +   F  G+       P  +            D+ F +
Sbjct: 7   GGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIADKALVDKLFGD 66

Query: 47  FS-SKILHLKGDRKDYD-FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
           F    ++H     KD D + + +L+    +VV   N  +A +          +++ IY  
Sbjct: 67  FKPDAVVHTAAAYKDPDDWYEDTLT----NVVGGANVVQAAKKA-------GVKRLIYFQ 115

Query: 105 SAGVY-LKSDLLP-HCETDTVDPKSRHK-GKLNTESVLESKGVNWTSLRPVYIYGPLNYN 161
           +A  Y LK    P   +     P S +   K   E  LE  GV++ + R   + GP N  
Sbjct: 116 TALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGEYYLELSGVDFVTFRLANVTGPRNVI 175

Query: 162 PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV 221
                F+ RLKAG+   +  +         VKDLAR   + L +       ++ S  + V
Sbjct: 176 GPLPTFYQRLKAGKKCFVTDT---RRDFVFVKDLARVVDKAL-DGIRGHGAYHFSSGEDV 231

Query: 222 TFDGLARACAKVTGYCIAGSVE--HRMPDD 249
           +   L  A  +     +   VE     PDD
Sbjct: 232 SIKELFDAVVEALDLPLRPEVEVVELGPDD 261

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 55/242 (22%), Positives = 95/242 (39%), Gaps = 34/242 (14%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T  +G  +   L+   G  VT+ TR  +         S  EF     K+  +  D   
Sbjct: 6   GATGTLGGPIVSALLASPGFTVTVLTRPSST--------SSNEFQPSGVKV--VPVDYAS 55

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP-ILDALPNLEQFIYCSSAGV--YLKSDL-LP 116
           ++ + ++L  KG D V    G  A   +  ++DA           +AGV  ++ S+  + 
Sbjct: 56  HESLVAAL--KGVDAVISALGGAAIGDQLKLIDA---------AIAAGVKRFIPSEFGVD 104

Query: 117 HCETDTVDPKSRHKGKLNTESVLESK--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           +     +        K +    L +K  G+ WT    V     L+Y  +E  F     A 
Sbjct: 105 YDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTY---VSTGMFLDY-LLEPLFGVVDLAN 160

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKV 233
           R   I G G        ++D+ RA  + L + ++   +V  ++G+  VT + L     +V
Sbjct: 161 RTATIYGDGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAGD-VVTQNELIALVERV 219

Query: 234 TG 235
           TG
Sbjct: 220 TG 221

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 60/286 (20%), Positives = 98/286 (34%), Gaps = 58/286 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L+  L  EGH V    RG A            +  EF         D ++ 
Sbjct: 7   GAGGFIGSHLAERLKAEGHYV----RG-ADWKSPEHMTQPTDDDEF------HLVDLREM 55

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN---------------LEQFIY 102
           +    +    G D V+    D+ G    +    +    N               +E+F++
Sbjct: 56  ENCLKATE--GVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLF 113

Query: 103 CSSAGVY-----LKSDLLPHCETDTVDPKSRHKG----KLNTESVL----ESKGVNWTSL 149
            SSA VY     L++ ++   E D   P          KL TE +     E  G+    +
Sbjct: 114 ASSACVYPEFKQLETTVVRLREED-AWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIV 172

Query: 150 RPVYIYGPL-NYNPVEEWFFHRL-------KAGRPIPIPGSGIQVTQLGHVKDLARAFVQ 201
           R   IYGP   ++   E     +       K G    I G G+Q     ++ D      +
Sbjct: 173 RFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRR 232

Query: 202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMP 247
           ++  E    +  N+  ++ V+ + LA      +G      + H  P
Sbjct: 233 LM--ESDFGEPVNLGSDEMVSMNELAEMVLSFSG--KPLEIIHHTP 274

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 11/104 (10%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEWF--------FHRLKA-GRPIPIP-GSGIQVTQLGHV 192
           G +  S  P  +YGP +    E           FH  KA G P  +  GSG  + +  HV
Sbjct: 149 GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHV 208

Query: 193 KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
            DLA A V ++     +  V N+     VT   LA    +V G+
Sbjct: 209 DDLADAVVFLMRRYSGAEHV-NVGSGDEVTIKELAELVKEVVGF 251

Length = 306

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 56/273 (20%), Positives = 97/273 (35%), Gaps = 49/273 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           GGT F+G  L + L++ G +V +  R ++   A +   E+  E          L+GD   
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRV----LEGDLTQ 60

Query: 61  YDFVKSSLS-------AKGFDVV------YDING--READEV-----EPILDALPNLEQ- 99
            +     LS       A   D V      YD      +A        E +L+    L+  
Sbjct: 61  PNL---GLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117

Query: 100 -FIYCSSAGVY-LKSDLLPHCETDTVDP------KSRHKGKLNTESVLESKGVNWTSLRP 151
            F Y S+A V   +   +   E +          +S+ + +    +   +  +  T  RP
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRA--AATQIPLTVYRP 175

Query: 152 VYIYGPLN-------YNPVEEWFFHRL-KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
             + G              E    + L K GR +P+PG+      L  V  +A A V + 
Sbjct: 176 SIVVGDSKTGRIEKIDGLYE--LLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLS 233

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
              +A+ Q+F+++     T   +A         
Sbjct: 234 KKPEANGQIFHLTDPTPQTLREIADLFKSAFLS 266

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGE 39
          GGT FIG  L+R L   GH+V + +R +   A+ L   
Sbjct: 6  GGTGFIGRALTRRLTAAGHEVVVLSR-RPGKAEGLAEV 42

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 63/280 (22%), Positives = 91/280 (32%), Gaps = 93/280 (33%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT FIG  L++ L K GH+VT+ TR   P A     E  + +A   +  L         
Sbjct: 5   GGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTK-WEGYKPWAGEDADSL--------- 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILD------------------------ALPNL 97
                    +G D V ++ G      EPI D                        A+   
Sbjct: 55  ---------EGADAVINLAG------EPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAA 99

Query: 98  EQ----FIYCSSAGVYLKSDLLPHCETDTVDPK-------------SRHKGKLNTES--- 137
           EQ    FI  S+ G Y  S+   + E D+                 ++    L T     
Sbjct: 100 EQKPKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLL 159

Query: 138 ----VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK 193
               VL  KG     +   +  G                 G P+   GSG Q     H++
Sbjct: 160 RTGIVLGPKGGALAKMLLPFRLG----------------LGGPL---GSGRQWFSWIHIE 200

Query: 194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKV 233
           DL +  +  L N   S    N +  + V     A+A A+ 
Sbjct: 201 DLVQLILFALENASVS-GPVNATAPEPVRNKEFAKALARA 239

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 116 PHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           P+ E D   P +   + KL  E  + +       LR  ++YG    N V+          
Sbjct: 110 PYREDDPTGPLNVYGRTKLAGEQAVLAANPRHLILRTAWVYGEYGNNFVK-TMLRLAAER 168

Query: 175 RPIPIPGSGIQVT-QLG---HVKDLARAFVQVLG---NEKASRQVFNISGEKYVTFDGLA 227
             + +      V  QLG     +DLA A + ++       A    ++++G    ++   A
Sbjct: 169 DELRV------VDDQLGSPTSARDLADALLALIRKRLRGPALAGTYHLAGSGETSWYDFA 222

Query: 228 RACAKVTG 235
           RA     G
Sbjct: 223 RAIFDEAG 230

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 8/84 (9%)

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF 199
           G+     R    YGP  Y   E+          AG+P+P+ G G QV    +V+D  RA 
Sbjct: 169 GLPALITRCSNNYGP--YQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI 226

Query: 200 VQVLGNEKA-SRQVFNISGEKYVT 222
             VL  EK    + +NI G    T
Sbjct: 227 YLVL--EKGRVGETYNIGGGNERT 248

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 53/262 (20%), Positives = 100/262 (38%), Gaps = 41/262 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG  L   L++EG++V +     +   + +  E + +   F      +K D  D 
Sbjct: 6   GGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRF------VKRDLLDT 59

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEPILD---------------ALPNLEQF 100
                 ++ K  D V+      D+     D   P +D                   +++ 
Sbjct: 60  ---ADKVAKKDGDTVFHLAANPDVRLGATD---PDIDLEENVLATYNVLEAMRANGVKRI 113

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK----GVNWTSLRPVYIY 155
           ++ SS+ VY ++ ++P  E     P S +   KL  E+++ +     G      R   I 
Sbjct: 114 VFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANIV 173

Query: 156 GPLNYNPVEEWFFHRLKAGRP--IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
           GP + + V   F ++LK   P  + + G G Q     +V D   A +           +F
Sbjct: 174 GPRSTHGVIYDFINKLKR-NPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEGVNIF 232

Query: 214 NISGEKYVTFDGLARACAKVTG 235
           N+  +  ++ + +A    +  G
Sbjct: 233 NLGNDDTISVNEIAEIVIEELG 254

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 17/129 (13%)

Query: 116 PHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
           P+ E D  +P + + K KL  E  + +    +  LR  ++YG L    N V EW      
Sbjct: 115 PYKEEDAPNPLNVYGKSKLLGEVAVLNANPRYLILRTSWLYGELKNGENFV-EWMLRLAA 173

Query: 173 AGRPI----PIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNISGEKYVTFDGLA 227
             + +       GS        +  DLA A ++++  E+ S   ++++S    ++    A
Sbjct: 174 ERKEVNVVHDQIGSPT------YAADLADAILELI--ERNSLTGIYHLSNSGPISKYEFA 225

Query: 228 RACAKVTGY 236
           +  A   G 
Sbjct: 226 KLIADALGL 234

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 166 WFFHRLKAGRPIPIPGSG-IQVTQLGHVKDLARAFVQVLGNEKASR-QVFNISG 217
           +F      G+P+ I G G  QV  + H  DL   +++   N    + +VFNI G
Sbjct: 216 YFLKCAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGG 269

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 61/269 (22%), Positives = 103/269 (38%), Gaps = 59/269 (21%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           FIG  L   LV++G++V  F       +    G  D    E   KI  + GD +D D V+
Sbjct: 9   FIGSHLVEALVRQGYEVRAFVLYN---SFNSWGWLDTSPPEVKDKIEVVTGDIRDPDSVR 65

Query: 66  SSLSAKGFDVVY---------------------DINGREADEVEPILDALPNLEQFIYCS 104
            ++  KG DVV+                     ++ G   + ++   D    +E+ ++ S
Sbjct: 66  KAM--KGCDVVFHLAALIAIPYSYIAPDSYVDTNVTG-TLNVLQAARDL--GVEKVVHTS 120

Query: 105 SAGVYLKSDLLPHCETDTVDPKSRHKG-KLNT----ESVLESKGVNWTSLRPVYIYGPLN 159
           ++ VY  +  +P  E   +  +S +   K+       S   S     T +RP   YGP  
Sbjct: 121 TSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRPFNTYGP-- 178

Query: 160 YNPVEEWFFHRLKAGRPIP-IPG---SGIQVTQLG---------HVKDLARAFVQVLGNE 206
                     R  A   IP I     SG +  +LG         +V D  R F+ +  ++
Sbjct: 179 ----------RQSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIAESD 228

Query: 207 KASRQVFNISGEKYVTFDGLARACAKVTG 235
           K   +V NI     ++     +  A++ G
Sbjct: 229 KTVGEVINIGSNFEISIGDTVKLIAEIMG 257

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)

Query: 2  GGT-RFIGVFLSRLLVKEGHQVTLF----TRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
          GGT R +   L+  LV  GH+VTLF    ++  AP+   +P     +             
Sbjct: 19 GGTERVVA-ALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEA-- 75

Query: 57 DRKDYDFVKSSLSAKGFDVVYD 78
                  + +L+A  FD+V++
Sbjct: 76 ----LALAERALAAGDFDIVHN 93

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	249
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.98
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.98
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.98
PLN02214	342	cinnamoyl-CoA reductase	99.97
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
PLN00198	338	anthocyanidin reductase; Provisional	99.97
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02650	351	dihydroflavonol-4-reductase	99.97
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.97
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
PLN02686	367	cinnamoyl-CoA reductase	99.96
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.96
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.95
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.95
PRK05865	854	hypothetical protein; Provisional	99.95
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.95
PLN02583	297	cinnamoyl-CoA reductase	99.94
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.93
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.93
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.92
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.92
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.92
PRK12320	699	hypothetical protein; Provisional	99.91
PLN02503	605	fatty acyl-CoA reductase 2	99.9
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.89
PLN02260	668	probable rhamnose biosynthetic enzyme	99.86
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.86
PLN03209	576	translocon at the inner envelope of chloroplast su	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.83
PRK06482	276	short chain dehydrogenase; Provisional	99.81
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.81
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.81
PRK09135	249	pteridine reductase; Provisional	99.79
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.79
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.78
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.77
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.77
COG2910	211	Putative NADH-flavin reductase [General function p	99.76
PRK05875	276	short chain dehydrogenase; Provisional	99.75
PRK08263	275	short chain dehydrogenase; Provisional	99.75
PRK07806	248	short chain dehydrogenase; Provisional	99.75
PRK07774	250	short chain dehydrogenase; Provisional	99.75
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.73
PRK07067	257	sorbitol dehydrogenase; Provisional	99.73
PRK12828	239	short chain dehydrogenase; Provisional	99.72
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK07074	257	short chain dehydrogenase; Provisional	99.72
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK12746	254	short chain dehydrogenase; Provisional	99.71
PRK07775	274	short chain dehydrogenase; Provisional	99.7
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.7
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.7
PRK06128	300	oxidoreductase; Provisional	99.69
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.69
PRK06180	277	short chain dehydrogenase; Provisional	99.69
PRK06914	280	short chain dehydrogenase; Provisional	99.69
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.69
PRK09186	256	flagellin modification protein A; Provisional	99.69
PRK06138	252	short chain dehydrogenase; Provisional	99.69
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK12827	249	short chain dehydrogenase; Provisional	99.68
PRK07890	258	short chain dehydrogenase; Provisional	99.68
PRK12829	264	short chain dehydrogenase; Provisional	99.68
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.67
PRK06123	248	short chain dehydrogenase; Provisional	99.67
PRK06701	290	short chain dehydrogenase; Provisional	99.66
PRK06182	273	short chain dehydrogenase; Validated	99.66
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.66
PRK12937	245	short chain dehydrogenase; Provisional	99.66
PRK05876	275	short chain dehydrogenase; Provisional	99.66
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.66
KOG2774	366	consensus NAD dependent epimerase [General functio	99.66
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK07060	245	short chain dehydrogenase; Provisional	99.65
PRK06194	287	hypothetical protein; Provisional	99.65
PRK08219	227	short chain dehydrogenase; Provisional	99.65
PRK07041	230	short chain dehydrogenase; Provisional	99.64
PRK07577	234	short chain dehydrogenase; Provisional	99.64
PRK12939	250	short chain dehydrogenase; Provisional	99.64
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.64
PRK08324	681	short chain dehydrogenase; Validated	99.63
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.63
PRK06181	263	short chain dehydrogenase; Provisional	99.63
PRK06523	260	short chain dehydrogenase; Provisional	99.63
PRK05717	255	oxidoreductase; Validated	99.63
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.62
PRK08628	258	short chain dehydrogenase; Provisional	99.62
PRK05993	277	short chain dehydrogenase; Provisional	99.62
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.62
PRK06114	254	short chain dehydrogenase; Provisional	99.62
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.61
PRK06841	255	short chain dehydrogenase; Provisional	99.61
PRK07985	294	oxidoreductase; Provisional	99.61
PRK06179	270	short chain dehydrogenase; Provisional	99.61
PRK09134	258	short chain dehydrogenase; Provisional	99.61
PRK10538	248	malonic semialdehyde reductase; Provisional	99.61
PRK06500	249	short chain dehydrogenase; Provisional	99.61
PRK06196	315	oxidoreductase; Provisional	99.61
PRK06398	258	aldose dehydrogenase; Validated	99.61
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.6
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
PRK07069	251	short chain dehydrogenase; Validated	99.59
PRK12743	256	oxidoreductase; Provisional	99.59
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.59
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.58
PRK09291	257	short chain dehydrogenase; Provisional	99.58
PLN02253	280	xanthoxin dehydrogenase	99.58
PRK08643	256	acetoin reductase; Validated	99.58
PRK07478	254	short chain dehydrogenase; Provisional	99.58
PRK06949	258	short chain dehydrogenase; Provisional	99.58
PRK07856	252	short chain dehydrogenase; Provisional	99.57
PRK07326	237	short chain dehydrogenase; Provisional	99.57
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.57
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.57
PRK12744	257	short chain dehydrogenase; Provisional	99.57
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.56
PRK07825	273	short chain dehydrogenase; Provisional	99.56
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.56
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.56
PRK12742	237	oxidoreductase; Provisional	99.56
PRK07063	260	short chain dehydrogenase; Provisional	99.56
PRK08017	256	oxidoreductase; Provisional	99.56
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.56
PRK07814	263	short chain dehydrogenase; Provisional	99.55
PRK08339	263	short chain dehydrogenase; Provisional	99.55
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK07454	241	short chain dehydrogenase; Provisional	99.55
PRK06483	236	dihydromonapterin reductase; Provisional	99.55
PRK06172	253	short chain dehydrogenase; Provisional	99.54
PRK05650	270	short chain dehydrogenase; Provisional	99.54
PRK12747	252	short chain dehydrogenase; Provisional	99.54
PRK08264	238	short chain dehydrogenase; Validated	99.54
PRK08226	263	short chain dehydrogenase; Provisional	99.54
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK08265	261	short chain dehydrogenase; Provisional	99.54
PRK09242	257	tropinone reductase; Provisional	99.54
PRK07109	334	short chain dehydrogenase; Provisional	99.54
PRK05867	253	short chain dehydrogenase; Provisional	99.53
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.53
PRK07035	252	short chain dehydrogenase; Provisional	99.53
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.53
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.53
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.53
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.52
PRK06101	240	short chain dehydrogenase; Provisional	99.52
PRK06057	255	short chain dehydrogenase; Provisional	99.52
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.52
PRK07677	252	short chain dehydrogenase; Provisional	99.52
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.51
PRK07024	257	short chain dehydrogenase; Provisional	99.5
PRK06198	260	short chain dehydrogenase; Provisional	99.49
PRK08589	272	short chain dehydrogenase; Validated	99.49
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.49
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.49
PRK06197	306	short chain dehydrogenase; Provisional	99.49
PRK07831	262	short chain dehydrogenase; Provisional	99.49
PRK07102	243	short chain dehydrogenase; Provisional	99.48
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.48
PRK07576	264	short chain dehydrogenase; Provisional	99.48
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.48
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.48
PRK05693	274	short chain dehydrogenase; Provisional	99.47
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.46
PRK07904	253	short chain dehydrogenase; Provisional	99.46
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.45
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.45
PRK06484	520	short chain dehydrogenase; Validated	99.45
PRK08267	260	short chain dehydrogenase; Provisional	99.45
PRK08251	248	short chain dehydrogenase; Provisional	99.44
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.44
PRK06924	251	short chain dehydrogenase; Provisional	99.44
PRK08278	273	short chain dehydrogenase; Provisional	99.44
PRK07023	243	short chain dehydrogenase; Provisional	99.44
PRK05866	293	short chain dehydrogenase; Provisional	99.44
PRK07062	265	short chain dehydrogenase; Provisional	99.44
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.44
PRK06139	330	short chain dehydrogenase; Provisional	99.43
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.43
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.41
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.39
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.39
PRK05854	313	short chain dehydrogenase; Provisional	99.39
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.38
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.38
PRK06940	275	short chain dehydrogenase; Provisional	99.38
PRK05872	296	short chain dehydrogenase; Provisional	99.38
PRK06125	259	short chain dehydrogenase; Provisional	99.37
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.37
PRK09072	263	short chain dehydrogenase; Provisional	99.36
PRK07201	657	short chain dehydrogenase; Provisional	99.36
PRK07578	199	short chain dehydrogenase; Provisional	99.35
PRK07832	272	short chain dehydrogenase; Provisional	99.34
PRK05855	582	short chain dehydrogenase; Validated	99.34
PRK06953	222	short chain dehydrogenase; Provisional	99.34
PRK08703	239	short chain dehydrogenase; Provisional	99.33
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.33
PRK08177	225	short chain dehydrogenase; Provisional	99.33
PRK05884	223	short chain dehydrogenase; Provisional	99.32
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.31
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.3
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.28
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.28
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.27
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.27
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.27
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.27
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.26
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.26
PRK07791	286	short chain dehydrogenase; Provisional	99.26
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.25
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.24
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.24
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.22
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.2
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.2
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.2
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.19
PRK12367	245	short chain dehydrogenase; Provisional	99.19
PRK06484	520	short chain dehydrogenase; Validated	99.19
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.18
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.17
PLN00015	308	protochlorophyllide reductase	99.17
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.14
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.14
PLN02780	320	ketoreductase/ oxidoreductase	99.1
PRK05599	246	hypothetical protein; Provisional	99.09
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.09
PRK08303	305	short chain dehydrogenase; Provisional	99.09
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.02
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.0
KOG0725	270	consensus Reductases with broad range of substrate	98.98
PRK08862	227	short chain dehydrogenase; Provisional	98.92
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.87
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.85
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.84
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.75
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.74
KOG1208	314	consensus Dehydrogenases with different specificit	98.69
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.68
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.66
PRK08309	177	short chain dehydrogenase; Provisional	98.55
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.51
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.51
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.5
PRK09620	229	hypothetical protein; Provisional	98.49
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.47
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.42
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.35
COG1028	251	FabG Dehydrogenases with different specificities (	98.35
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.34
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.26
PRK06720	169	hypothetical protein; Provisional	98.24
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.21
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.18
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.11
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.05
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	97.8
PTZ00325	321	malate dehydrogenase; Provisional	97.79
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.74
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.72
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.65
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.63
PLN00106	323	malate dehydrogenase	97.62
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.51
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.48
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.43
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.38
COG3268	382	Uncharacterized conserved protein [Function unknow	97.36
PRK14982	340	acyl-ACP reductase; Provisional	96.85
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.84
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.81
PRK05086	312	malate dehydrogenase; Provisional	96.74
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.58
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.57
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.51
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.5
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.5
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.48
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	96.48
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.47
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.44
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.42
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.38
PRK09496	453	trkA potassium transporter peripheral membrane com	96.35
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.29
PRK09496	453	trkA potassium transporter peripheral membrane com	96.27
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.15
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.11
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.06
PRK04148	134	hypothetical protein; Provisional	96.02
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	95.97
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.96
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.93
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	95.91
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.9
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.79
PRK10669	558	putative cation:proton antiport protein; Provision	95.76
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.74
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.74
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.68
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	95.66
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.61
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.61
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.6
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.57
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.57
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	95.55
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.53
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.42
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.39
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.36
PLN02383	344	aspartate semialdehyde dehydrogenase	95.35
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.35
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	95.3
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.26
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	95.24
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.2
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.2
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	95.12
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.07
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.06
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.0
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.88
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.87
PRK08223	287	hypothetical protein; Validated	94.83
PRK06436	303	glycerate dehydrogenase; Provisional	94.8
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	94.79
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.69
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.67
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.65
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	94.6
PRK08328	231	hypothetical protein; Provisional	94.59
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.57
PRK08655	437	prephenate dehydrogenase; Provisional	94.55
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	94.53
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	94.51
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	94.51
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.5
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.5
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	94.49
PRK13243	333	glyoxylate reductase; Reviewed	94.49
PLN02494	477	adenosylhomocysteinase	94.43
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.29
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.29
PRK10537	393	voltage-gated potassium channel; Provisional	94.24
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.2
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.18
PLN02928	347	oxidoreductase family protein	94.16
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.16
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.06
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.04
PTZ00075	476	Adenosylhomocysteinase; Provisional	94.01
PRK07574	385	formate dehydrogenase; Provisional	93.99
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	93.95
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	93.95
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	93.92
PRK06487	317	glycerate dehydrogenase; Provisional	93.79
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.78
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	93.76
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.74
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	93.7
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.7
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.68
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	93.67
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.66
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	93.66
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.65
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	93.64
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	93.64
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	93.63
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	93.62
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	93.61
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	93.61
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	93.6
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	93.58
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	93.56
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.56
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	93.55
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	93.54
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	93.47
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	93.46
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	93.43
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	93.4
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.33
PRK12480	330	D-lactate dehydrogenase; Provisional	93.31
PLN02586	360	probable cinnamyl alcohol dehydrogenase	93.29
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	93.26
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	93.21
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	93.19
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	93.17
PRK07877	722	hypothetical protein; Provisional	93.15
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	93.12
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	93.12
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	93.09
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	93.04
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	92.93
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	92.93
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	92.88
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	92.87
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	92.83
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	92.73
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	92.71
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.68
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	92.66
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	92.66
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	92.6
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	92.59
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	92.59
PRK07411	390	hypothetical protein; Validated	92.46
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	92.4
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	92.38
KOG0409	327	consensus Predicted dehydrogenase [General functio	92.36
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	92.33
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	92.33
PLN03139	386	formate dehydrogenase; Provisional	92.29
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	92.26
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	92.23
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	92.22
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	92.11
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	92.1
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	92.06
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	92.02
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	91.87
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	91.78
PRK14852	989	hypothetical protein; Provisional	91.74
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	91.69
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	91.68
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.64
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	91.62
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	91.61
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	91.58
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	91.56
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	91.46
PRK15059	292	tartronate semialdehyde reductase; Provisional	91.3
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	91.22
PRK13403	335	ketol-acid reductoisomerase; Provisional	91.16
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	91.08
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	91.01
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	90.98
PRK06932	314	glycerate dehydrogenase; Provisional	90.86
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	90.86
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	90.81
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	90.78
PRK07417	279	arogenate dehydrogenase; Reviewed	90.78
PRK05442	326	malate dehydrogenase; Provisional	90.74
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	90.7
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.49
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	90.45
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	90.45
PLN02948	577	phosphoribosylaminoimidazole carboxylase	90.4
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	90.34
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	90.34
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	90.23
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	90.17

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=8.1e-39  Score=242.14  Aligned_cols=238  Identities=24%  Similarity=0.299  Sum_probs=197.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||+|.+.+|++.|++|+++++-.......+..          ..++++.+|+.|.+.|+++|++.++|.|||+|
T Consensus         6 tGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           6 TGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------LQFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             ecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------ccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            79999999999999999999999999987775544431          12689999999999999999999999999999


Q ss_pred             CC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-
Q 025702           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (249)
                      +.                |+.++.+|+++|+  ++++|||.||+.+||.+...|+.|+.+..|.++| .+|++.|++++ 
T Consensus        76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d  155 (329)
T COG1087          76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRD  155 (329)
T ss_pred             cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHH
Confidence            86                5668999999988  8999999999999999999999999999999999 99999999984 


Q ss_pred             ---hcCCcEEEeecceeeCCCC----------CcchHHHHHHHHHcCC-CeeecC------CCcceEeeeeHHHHHHHHH
Q 025702          141 ---SKGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKAGR-PIPIPG------SGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       141 ---~~~~~~~~~r~~~v~g~~~----------~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~i~~~D~a~~~~  200 (249)
                         ..+++++++|..++-|...          ...+++.....+.... .+.++|      +|.-.||+||+.|+|++.+
T Consensus       156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~  235 (329)
T COG1087         156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV  235 (329)
T ss_pred             HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence               4679999999999998421          1234555544443333 356555      4456799999999999999


Q ss_pred             HHhcCCCC--CCceEEecCCccccHHHHHHHHHHHhCCCccccccCCCCC
Q 025702          201 QVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPD  248 (249)
Q Consensus       201 ~~~~~~~~--~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~~~~~~~  248 (249)
                      .+++.-..  ...+||+++|...|..|+++++++++|.+.+-......|.
T Consensus       236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~G  285 (329)
T COG1087         236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAG  285 (329)
T ss_pred             HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCC
Confidence            99875322  2358999999999999999999999998766555555444

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=2.4e-37  Score=252.06  Aligned_cols=234  Identities=19%  Similarity=0.200  Sum_probs=187.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++|+++|+++|++|++++|........+.............+++++.+|+.|.+.+..+++  ++|+|||+|
T Consensus        21 tGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~d~ViHlA   98 (348)
T PRK15181         21 TGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NVDYVLHQA   98 (348)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CCCEEEECc
Confidence            799999999999999999999999998754322111100000000001368899999999999999998  899999998


Q ss_pred             CC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-
Q 025702           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (249)
                      +.                |+.++.+++++|+  ++++|||+||..+||.....+..|+.+..|.+.| .+|..+|.+++ 
T Consensus        99 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  178 (348)
T PRK15181         99 ALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADV  178 (348)
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence            74                2346889999988  7899999999999997666666777777788878 99999998764 


Q ss_pred             ---hcCCcEEEeecceeeCCCCC-----cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC--CCC
Q 025702          141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASR  210 (249)
Q Consensus       141 ---~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~  210 (249)
                         +.+++++++||+++|||++.     ..+++.++.++..+.++.+++++.+.++|+|++|+|++++.++....  ..+
T Consensus       179 ~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~  258 (348)
T PRK15181        179 FARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKN  258 (348)
T ss_pred             HHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCC
Confidence               45899999999999999742     23577888888888888888999999999999999999998776432  256


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCC
Q 025702          211 QVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       211 ~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      ++||+++++.+|++|+++.+.+.++.
T Consensus       259 ~~yni~~g~~~s~~e~~~~i~~~~~~  284 (348)
T PRK15181        259 KVYNVAVGDRTSLNELYYLIRDGLNL  284 (348)
T ss_pred             CEEEecCCCcEeHHHHHHHHHHHhCc
Confidence            89999999999999999999999973

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.6e-36  Score=228.69  Aligned_cols=237  Identities=22%  Similarity=0.260  Sum_probs=200.1

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCcc-ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      |||.||||++++++++++.  ++|+.++.-.-.. ...+.     . ....++..|+++|+.|.+.+.+++++..+|+|+
T Consensus         6 TGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~-----~-~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           6 TGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA-----D-VEDSPRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             ecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH-----h-hhcCCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            7999999999999999985  5577776533211 11110     0 111468999999999999999999988899999


Q ss_pred             ecCCC----------------ChhhhHHHHHhCC--CC-CeEEEeeccccccCCCCC--CCCCCCCCCCCCcc-cchHHH
Q 025702           78 DINGR----------------EADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNT  135 (249)
Q Consensus        78 ~~~~~----------------~~~~~~~~~~a~~--~~-~~~i~~Ss~~v~~~~~~~--~~~e~~~~~~~~~~-~~k~~~  135 (249)
                      |+|+.                |+.++.+++++++  .. -||+|+||..|||+-...  .++|..+..|.++| +||+.+
T Consensus        80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAas  159 (340)
T COG1088          80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAAS  159 (340)
T ss_pred             EechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhH
Confidence            99875                4568999999988  33 499999999999975543  68899999999999 999988


Q ss_pred             HHHH----hhcCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC
Q 025702          136 ESVL----ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (249)
Q Consensus       136 e~~~----~~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (249)
                      ..++    +.++++++|.|+++.|||.++ .-++|.++..+..+.+++++|+|.+.++|+|++|-++++..++..... |
T Consensus       160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-G  238 (340)
T COG1088         160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-G  238 (340)
T ss_pred             HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC-C
Confidence            8776    568999999999999999865 457888899999999999999999999999999999999999999874 9


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCccc----cccC
Q 025702          211 QVFNISGEKYVTFDGLARACAKVTGYCIAG----SVEH  244 (249)
Q Consensus       211 ~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~----~~~~  244 (249)
                      ++|||+++...+--++++.|++.+|...+.    +.++
T Consensus       239 E~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V  276 (340)
T COG1088         239 ETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFV  276 (340)
T ss_pred             ceEEeCCCccchHHHHHHHHHHHhCccccchhhheEec
Confidence            999999999999999999999999977663    5554

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=3e-35  Score=242.19  Aligned_cols=230  Identities=58%  Similarity=0.977  Sum_probs=188.3

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||||+|++|+++|+++||+|++++|+.... ..+.......+.+. ..+++++.+|+.|   +..++...++|+|||++
T Consensus        63 GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~  138 (378)
T PLN00016         63 GGHAFIGFYLAKELVKAGHEVTLFTRGKEPS-QKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAGAGFDVVYDNN  138 (378)
T ss_pred             CCceeEhHHHHHHHHHCCCEEEEEecCCcch-hhhccCchhhhhHhhhcCceEEEecHHH---HHhhhccCCccEEEeCC
Confidence            9999999999999999999999999987642 11111100111111 2368999999977   44455445899999999


Q ss_pred             CCChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEeecceeeCCC
Q 025702           81 GREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPL  158 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r~~~v~g~~  158 (249)
                      +.....+.+++++++  ++++|||+||.++|+.....+..|+.+..|..   +|..+|.++++.+++++++||+++|||+
T Consensus       139 ~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~---sK~~~E~~l~~~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        139 GKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA---GHLEVEAYLQKLGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc---hHHHHHHHHHHcCCCeEEEeceeEECCC
Confidence            988888999999987  88999999999999976666666766555543   7999999999999999999999999997


Q ss_pred             CCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      .......+++..+..+.++.+++++.+.++++|++|+|++++.++.++...+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  295 (378)
T PLN00016        216 NNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPE  295 (378)
T ss_pred             CCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCC
Confidence            66666667777888888888888888899999999999999999998765678999999999999999999999999754

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=2.6e-35  Score=231.70  Aligned_cols=229  Identities=24%  Similarity=0.338  Sum_probs=180.9

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCcccc-CCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQ-QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      |||+||+|++|+++|+++|  ++|+++++.+..... .+..         ....+++.+|++|.+++.++++  ++|+||
T Consensus         3 TGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~---------~~~~~~~~~Di~d~~~l~~a~~--g~d~V~   71 (280)
T PF01073_consen    3 TGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK---------SGVKEYIQGDITDPESLEEALE--GVDVVF   71 (280)
T ss_pred             EcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc---------ccceeEEEeccccHHHHHHHhc--CCceEE
Confidence            7999999999999999999  799999988766321 1110         1233489999999999999999  999999


Q ss_pred             ecCCC---------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCC-CCCC---CCCCC--CCCCCcc-cchH
Q 025702           78 DINGR---------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPH---CETDT--VDPKSRH-KGKL  133 (249)
Q Consensus        78 ~~~~~---------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~-~~~~---~e~~~--~~~~~~~-~~k~  133 (249)
                      |+|+.               |+.++++++++|+  +++||||+||..++++.. ..++   +|..+  ..+.+.| .+|.
T Consensus        72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~  151 (280)
T PF01073_consen   72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA  151 (280)
T ss_pred             EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence            99874               4568999999988  899999999999987621 1222   23332  2355567 9999


Q ss_pred             HHHHHHhhc---------CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          134 NTESVLESK---------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       134 ~~e~~~~~~---------~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      .+|+++.+.         .+..+++||+.||||++.. +.+.+......+......+++....+++|++|+|.+++.+++
T Consensus       152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~  230 (280)
T PF01073_consen  152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ  230 (280)
T ss_pred             HHHHHHHhhcccccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence            999987432         3789999999999997533 344455566666556666888888999999999999988875


Q ss_pred             C-------CCCCCceEEecCCcccc-HHHHHHHHHHHhCCCcccc
Q 025702          205 N-------EKASRQVFNISGEKYVT-FDGLARACAKVTGYCIAGS  241 (249)
Q Consensus       205 ~-------~~~~~~~~~i~~~~~~s-~~~l~~~~~~~~g~~~~~~  241 (249)
                      .       ....|+.|+|++++++. +.+++..+.+.+|.+.+..
T Consensus       231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~  275 (280)
T PF01073_consen  231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKS  275 (280)
T ss_pred             HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcc
Confidence            3       23478999999999999 9999999999999887763

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=3.9e-34  Score=233.45  Aligned_cols=224  Identities=19%  Similarity=0.283  Sum_probs=180.4

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccC-CHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~-d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||+|++|+++|++. |++|++++|+.........          ..+++++.+|+. +.+.+.++++  ++|+|||
T Consensus         7 tGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH   74 (347)
T PRK11908          7 LGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----------HPRMHFFEGDITINKEWIEYHVK--KCDVILP   74 (347)
T ss_pred             ECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----------CCCeEEEeCCCCCCHHHHHHHHc--CCCEEEE
Confidence            799999999999999986 6999999987543221111          246899999997 6778888887  8999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCC-------CCCCcc-cchH
Q 025702           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (249)
                      +++..                ..++.+++++|+ ..++|||+||..+||.....++.|+.++       .|.+.| .+|.
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~  154 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ  154 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence            98741                335778899987 3479999999999997555556655431       345567 9999


Q ss_pred             HHHHHHh----hcCCcEEEeecceeeCCCCC---------cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       134 ~~e~~~~----~~~~~~~~~r~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .+|++++    +.+++++++||+++|||+..         ..+++.++..+..+.++.+.+++.+.++|+|++|++++++
T Consensus       155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~  234 (347)
T PRK11908        155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM  234 (347)
T ss_pred             HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence            9998874    46899999999999999742         2456778888888888888788889999999999999999


Q ss_pred             HHhcCCC--CCCceEEecCC-ccccHHHHHHHHHHHhCC
Q 025702          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKVTGY  236 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~-~~~s~~~l~~~~~~~~g~  236 (249)
                      .+++++.  ..+++||++++ ..+|+.|+++.+.+.+|.
T Consensus       235 ~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~  273 (347)
T PRK11908        235 KIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAE  273 (347)
T ss_pred             HHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcC
Confidence            9998763  35789999997 479999999999999984

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=6.4e-34  Score=235.18  Aligned_cols=230  Identities=20%  Similarity=0.229  Sum_probs=175.4

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      ||||||||++|++.|+++ |++|++++|+...........    ......+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        20 TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~----~~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~ViHl   93 (386)
T PLN02427         20 IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD----TVPWSGRIQFHRINIKHDSRLEGLIK--MADLTINL   93 (386)
T ss_pred             ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccc----cccCCCCeEEEEcCCCChHHHHHHhh--cCCEEEEc
Confidence            799999999999999998 599999998754422111100    00012479999999999999999998  89999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCC-------------------
Q 025702           80 NGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------------------  123 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------------------  123 (249)
                      |+..                ..++.+++++++ ..++|||+||..+||.....+..|+.+.                   
T Consensus        94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~  173 (386)
T PLN02427         94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFG  173 (386)
T ss_pred             ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccC
Confidence            9741                224667888876 4489999999999986432222222111                   


Q ss_pred             ---CCCCcc-cchHHHHHHHh----hcCCcEEEeecceeeCCCCC------------cchHHHHHHHHHcCCCeeecCCC
Q 025702          124 ---DPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSG  183 (249)
Q Consensus       124 ---~~~~~~-~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~  183 (249)
                         .|.+.| .+|..+|.++.    ..+++++++||+++|||+..            ..++..+...+.++.++.+.+++
T Consensus       174 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g  253 (386)
T PLN02427        174 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGG  253 (386)
T ss_pred             CCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCC
Confidence               123456 99999999874    35899999999999999742            12344555667778888888888


Q ss_pred             cceEeeeeHHHHHHHHHHHhcCCC-CCCceEEecCC-ccccHHHHHHHHHHHhCC
Q 025702          184 IQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE-KYVTFDGLARACAKVTGY  236 (249)
Q Consensus       184 ~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~-~~~s~~~l~~~~~~~~g~  236 (249)
                      .+.++|+|++|+|++++.+++++. ..+++||++++ +.+|+.|+++.+.+.+|.
T Consensus       254 ~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        254 QSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             CceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            888999999999999999998763 35679999997 589999999999999984

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.3e-33  Score=235.56  Aligned_cols=235  Identities=19%  Similarity=0.240  Sum_probs=177.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcccc------CC-CCC-Cchhh----hhccCceEEEEeccCCHHHHHHhh
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QL-PGE-SDQEF----AEFSSKILHLKGDRKDYDFVKSSL   68 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~------~~-~~~-~~~~~----~~~~~~v~~~~~d~~d~~~l~~~~   68 (249)
                      |||+||||++|+++|+++|++|++++|.......      .. +.. ....+    .....+++++.+|++|.+.+.+++
T Consensus        53 TGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l  132 (442)
T PLN02572         53 IGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAF  132 (442)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHH
Confidence            7999999999999999999999998764322110      00 000 00000    001246899999999999999999


Q ss_pred             hhCCCcEEEecCCC-------------------ChhhhHHHHHhCC--CCC-eEEEeeccccccCCCCCCCCC-------
Q 025702           69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCE-------  119 (249)
Q Consensus        69 ~~~~~d~Vi~~~~~-------------------~~~~~~~~~~a~~--~~~-~~i~~Ss~~v~~~~~~~~~~e-------  119 (249)
                      +..++|+|||+|+.                   |+.++.+++++++  +++ +||++||..+||... .+.+|       
T Consensus       133 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~E~~i~~~~  211 (442)
T PLN02572        133 KSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIEEGYITITH  211 (442)
T ss_pred             HhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCccccccccc
Confidence            87679999999854                   1235777888887  664 899999999998642 12222       


Q ss_pred             ----C---CCCCCCCcc-cchHHHHHHHh----hcCCcEEEeecceeeCCCCCc------------------chHHHHHH
Q 025702          120 ----T---DTVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN------------------PVEEWFFH  169 (249)
Q Consensus       120 ----~---~~~~~~~~~-~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~~------------------~~~~~~~~  169 (249)
                          +   .+..|.+.| .+|..+|.+++    ..+++++++||+++|||++..                  ..++.++.
T Consensus       212 ~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~  291 (442)
T PLN02572        212 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCV  291 (442)
T ss_pred             ccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHH
Confidence                2   145666778 99999998763    458999999999999997432                  34556667


Q ss_pred             HHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC--ceEEecCCccccHHHHHHHHHHH---hCCC
Q 025702          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKV---TGYC  237 (249)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~--~~~~i~~~~~~s~~~l~~~~~~~---~g~~  237 (249)
                      ++.+++++.+++++.+.++|+|++|++++++.++++....+  .+||+++ +.+|+.|+++.+++.   +|.+
T Consensus       292 ~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~  363 (442)
T PLN02572        292 QAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLD  363 (442)
T ss_pred             HHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCC
Confidence            77778888888999999999999999999999998753233  5799976 679999999999999   8854

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=9.5e-34  Score=219.30  Aligned_cols=206  Identities=33%  Similarity=0.488  Sum_probs=180.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++++++|+++|++|+.++|++......          ....+++++.+|+.|.+.+.++++..++|+|||++
T Consensus         4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFE----------EKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHH----------HHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EccCCHHHHHHHHHHHHcCCccccccccccccccc----------cccceEEEEEeeccccccccccccccCceEEEEee
Confidence            69999999999999999999999999988763210          00127899999999999999999977889999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (249)
                      +..                ...+.+++++++  ++++||++||..+|+.....+++|+.+..|.++| .+|..+|++++ 
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            873                234778899987  7789999999999999877888999988888888 99999998874 


Q ss_pred             ---hcCCcEEEeecceeeCCC----CCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceE
Q 025702          141 ---SKGVNWTSLRPVYIYGPL----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (249)
Q Consensus       141 ---~~~~~~~~~r~~~v~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (249)
                         +.+++++++||+.+|||.    ....+++.++..+.+++++.+++++.+.++++|++|+|++++.+++++...+++|
T Consensus       154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~y  233 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIY  233 (236)
T ss_dssp             HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEE
T ss_pred             cccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEE
Confidence               458999999999999998    4567888999999999999999999999999999999999999999988668899


Q ss_pred             Eec
Q 025702          214 NIS  216 (249)
Q Consensus       214 ~i~  216 (249)
                      ||+
T Consensus       234 Nig  236 (236)
T PF01370_consen  234 NIG  236 (236)
T ss_dssp             EES
T ss_pred             EeC
Confidence            985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=6.4e-33  Score=227.33  Aligned_cols=223  Identities=19%  Similarity=0.247  Sum_probs=177.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||+++++.|+++||+|++++|.........           ...++++.+|+.|.+.+..+++  ++|+|||++
T Consensus        27 tGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   93 (370)
T PLN02695         27 TGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-----------MFCHEFHLVDLRVMENCLKVTK--GVDHVFNLA   93 (370)
T ss_pred             ECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-----------cccceEEECCCCCHHHHHHHHh--CCCEEEEcc
Confidence            799999999999999999999999998754311100           1235788899999998888887  899999998


Q ss_pred             CCC-----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCC----CCCCCCC--CCCCCCcc-cchHH
Q 025702           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCETD--TVDPKSRH-KGKLN  134 (249)
Q Consensus        81 ~~~-----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~----~~~~e~~--~~~~~~~~-~~k~~  134 (249)
                      +..                 ...+.+++++|+  ++++|||+||..+|+....    .++.|+.  +..|.+.| .+|..
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~  173 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA  173 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHH
Confidence            631                 235678999877  7899999999999986432    2355554  56677778 99999


Q ss_pred             HHHHHh----hcCCcEEEeecceeeCCCCC-----cchHHHHHHHHHc-CCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       135 ~e~~~~----~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      +|.+++    +.+++++++||+++|||+..     ...++.++..+.. +.++.+++++.+.++|+|++|++++++.+++
T Consensus       174 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~  253 (370)
T PLN02695        174 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK  253 (370)
T ss_pred             HHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence            998763    46899999999999999642     1234556655544 4677888889999999999999999999887


Q ss_pred             CCCCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          205 NEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      .+.  ++.||+++++.+|+.|+++.+.+..|.+.
T Consensus       254 ~~~--~~~~nv~~~~~~s~~el~~~i~~~~g~~~  285 (370)
T PLN02695        254 SDF--REPVNIGSDEMVSMNEMAEIALSFENKKL  285 (370)
T ss_pred             ccC--CCceEecCCCceeHHHHHHHHHHHhCCCC
Confidence            653  57899999999999999999999999643

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=9.1e-33  Score=226.17  Aligned_cols=231  Identities=20%  Similarity=0.220  Sum_probs=181.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||+++++.|+++|++++++.++..........   ... ....+++++.+|+.|.+.+.++++..++|+|||++
T Consensus         7 tGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   82 (355)
T PRK10217          7 TGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL---APV-AQSERFAFEKVDICDRAELARVFTEHQPDCVMHLA   82 (355)
T ss_pred             EcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh---hhc-ccCCceEEEECCCcChHHHHHHHhhcCCCEEEECC
Confidence            79999999999999999998866554432221110000   000 00236788899999999999999866799999999


Q ss_pred             CCC----------------hhhhHHHHHhCC-----------CCCeEEEeeccccccCCC--CCCCCCCCCCCCCCcc-c
Q 025702           81 GRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD--LLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~-----------~~~~~i~~Ss~~v~~~~~--~~~~~e~~~~~~~~~~-~  130 (249)
                      +..                ..++.++++++.           ++++||++||..+||...  ..+++|+.+..|.+.| .
T Consensus        83 ~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~  162 (355)
T PRK10217         83 AESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSA  162 (355)
T ss_pred             cccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHH
Confidence            752                235677888763           357999999999998532  3457788777788888 9


Q ss_pred             chHHHHHHHh----hcCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       131 ~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      +|..+|.+++    +.+++++++||+++|||+.. ..+++.++.....+.++.+++++++.++|+|++|++++++.+++.
T Consensus       163 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        163 SKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT  242 (355)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence            9999988763    46899999999999999864 346677777777788788888999999999999999999999987


Q ss_pred             CCCCCceEEecCCccccHHHHHHHHHHHhCC
Q 025702          206 EKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      +. .+++||+++++.+|+.|+++.+++.+|.
T Consensus       243 ~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~  272 (355)
T PRK10217        243 GK-VGETYNIGGHNERKNLDVVETICELLEE  272 (355)
T ss_pred             CC-CCCeEEeCCCCcccHHHHHHHHHHHhcc
Confidence            54 4689999999999999999999999985

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=4.4e-33  Score=243.48  Aligned_cols=225  Identities=20%  Similarity=0.224  Sum_probs=181.1

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHH-HHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~-l~~~~~~~~~d~Vi~   78 (249)
                      ||||||+|++|+++|+++ ||+|++++|.+........          ..+++++.+|++|.+. +.++++  ++|+|||
T Consensus       321 TGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----------~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViH  388 (660)
T PRK08125        321 LGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----------HPRFHFVEGDISIHSEWIEYHIK--KCDVVLP  388 (660)
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----------CCceEEEeccccCcHHHHHHHhc--CCCEEEE
Confidence            799999999999999986 7999999997654221111          2478999999998654 577787  8999999


Q ss_pred             cCCC----------------ChhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCC-------CCCCcc-cchH
Q 025702           79 INGR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGKL  133 (249)
Q Consensus        79 ~~~~----------------~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k~  133 (249)
                      +|+.                +..++.+++++|+ ..++|||+||..+||.....+++|+.+.       .|.+.| .+|.
T Consensus       389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~  468 (660)
T PRK08125        389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ  468 (660)
T ss_pred             CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence            9874                2345788999987 3389999999999997655567776532       234456 9999


Q ss_pred             HHHHHHh----hcCCcEEEeecceeeCCCCC---------cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       134 ~~e~~~~----~~~~~~~~~r~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .+|.+++    ..+++++++||+++|||++.         ...++.++.++.++.++.+.+++.+.++|+|++|++++++
T Consensus       469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~  548 (660)
T PRK08125        469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF  548 (660)
T ss_pred             HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence            9999874    45899999999999999742         2456777888888888888888899999999999999999


Q ss_pred             HHhcCCC--CCCceEEecCCc-cccHHHHHHHHHHHhCCC
Q 025702          201 QVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGYC  237 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~-~~s~~~l~~~~~~~~g~~  237 (249)
                      .+++++.  ..+++||+++++ .+|++|+++.+.+.+|.+
T Consensus       549 ~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        549 RIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             HHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            9998753  246799999985 799999999999999853

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=2.2e-33  Score=224.08  Aligned_cols=210  Identities=18%  Similarity=0.179  Sum_probs=171.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||+++++.|++.| +|++++|...                      .+.+|++|.+.+.++++..++|+|||+|
T Consensus         6 tG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   62 (299)
T PRK09987          6 FGKTGQVGWELQRALAPLG-NLIALDVHST----------------------DYCGDFSNPEGVAETVRKIRPDVIVNAA   62 (299)
T ss_pred             ECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------cccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999 7998887632                      1357999999999999876799999998


Q ss_pred             CCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +..                ..++.+++++|+ ...+|||+||..||+.....|++|+++..|.+.| .+|..+|++++..
T Consensus        63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            752                234778899987 3358999999999988767789999999999888 9999999999887


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCC--CcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS--GIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (249)
                      ..+++++|++++|||+. .+++..++..+.++.++.+.++  +.+.+.+.+.+|+++++..++..+. .+++||+++++.
T Consensus       143 ~~~~~ilR~~~vyGp~~-~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~-~~giyni~~~~~  220 (299)
T PRK09987        143 CAKHLIFRTSWVYAGKG-NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE-VAGLYHLVASGT  220 (299)
T ss_pred             CCCEEEEecceecCCCC-CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC-CCCeEEeeCCCC
Confidence            77899999999999964 3566777888878888887776  4444455566778888887776543 246999999999


Q ss_pred             ccHHHHHHHHHHHhC
Q 025702          221 VTFDGLARACAKVTG  235 (249)
Q Consensus       221 ~s~~~l~~~~~~~~g  235 (249)
                      +|+.|+++.+.+.++
T Consensus       221 ~s~~e~~~~i~~~~~  235 (299)
T PRK09987        221 TTWHDYAALVFEEAR  235 (299)
T ss_pred             ccHHHHHHHHHHHHH
Confidence            999999999988643

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=7.2e-33  Score=225.63  Aligned_cols=234  Identities=18%  Similarity=0.171  Sum_probs=182.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccc-cCCCCCCchhh-hhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~-~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++|+++|++.|++|++++|.+.... ..+.. ..... .....+++++.+|++|.+.+.++++..++|+|||
T Consensus         6 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   84 (343)
T TIGR01472         6 TGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEH-IYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYN   84 (343)
T ss_pred             EcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhh-hhhccccccccceeEEEeccCCHHHHHHHHHhCCCCEEEE
Confidence            799999999999999999999999999865310 10100 00000 0002468999999999999999998667899999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CC---CeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHH
Q 025702           79 INGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (249)
                      +|+..                ..++.+++++|+  ++   ++|||+||..+||.....+..|+.+..|.+.| .+|..+|
T Consensus        85 ~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e  164 (343)
T TIGR01472        85 LAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAH  164 (343)
T ss_pred             CCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHH
Confidence            99851                225778899876  43   38999999999997666678888888888888 9999999


Q ss_pred             HHHh----hcCCcEEEeecceeeCCCCCcc----hHHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHhcCCC
Q 025702          137 SVLE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       137 ~~~~----~~~~~~~~~r~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (249)
                      .+++    +.+++++..|+.++|||+....    .+..++..+..+.. ....+++.+.++|+|++|+|++++.+++++.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~  244 (343)
T TIGR01472       165 WITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK  244 (343)
T ss_pred             HHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC
Confidence            8874    3578889999999999864322    33445555555653 3455888899999999999999999998754


Q ss_pred             CCCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          208 ASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       208 ~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                        ++.|||++++.+|+.|+++.+.+.+|.+
T Consensus       245 --~~~yni~~g~~~s~~e~~~~i~~~~g~~  272 (343)
T TIGR01472       245 --PDDYVIATGETHSVREFVEVSFEYIGKT  272 (343)
T ss_pred             --CccEEecCCCceeHHHHHHHHHHHcCCC
Confidence              3689999999999999999999999954

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=7.3e-33  Score=230.15  Aligned_cols=222  Identities=21%  Similarity=0.243  Sum_probs=176.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++|++|++++|...........      .....+++++.+|+.+..     +.  ++|+|||+|
T Consensus       126 TGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~------~~~~~~~~~~~~Di~~~~-----~~--~~D~ViHlA  192 (436)
T PLN02166        126 TGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH------LFGNPRFELIRHDVVEPI-----LL--EVDQIYHLA  192 (436)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhh------hccCCceEEEECcccccc-----cc--CCCEEEECc
Confidence            79999999999999999999999999864321111100      000246788888887642     34  899999999


Q ss_pred             CC----------------ChhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCC-----CCCCCCcc-cchHHHHH
Q 025702           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~e~  137 (249)
                      +.                |+.++.+++++|+ ...+||++||..|||.....+.+|+.     +..|.+.| .+|..+|+
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~  272 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  272 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence            73                2345788999987 33599999999999976555666653     45566667 99999999


Q ss_pred             HHh----hcCCcEEEeecceeeCCCCC---cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC
Q 025702          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (249)
Q Consensus       138 ~~~----~~~~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (249)
                      +++    +.+++++++||+++|||+..   ..+++.++..+.++.++.+++++.+.++|+|++|++++++.+++.+.  +
T Consensus       273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~--~  350 (436)
T PLN02166        273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH--V  350 (436)
T ss_pred             HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--C
Confidence            874    45899999999999999742   35677788888888888888988899999999999999999997643  4


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          211 QVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       211 ~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      ++||+++++.+|+.|+++.+.+.+|.+
T Consensus       351 giyNIgs~~~~Si~ela~~I~~~~g~~  377 (436)
T PLN02166        351 GPFNLGNPGEFTMLELAEVVKETIDSS  377 (436)
T ss_pred             ceEEeCCCCcEeHHHHHHHHHHHhCCC
Confidence            699999999999999999999999954

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.2e-33  Score=208.10  Aligned_cols=240  Identities=22%  Similarity=0.303  Sum_probs=197.2

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      |||.||+|++.+..+...  .++.+.++.-.--.. ..+..      ....++..++.+|+.+...+..++.....|.|+
T Consensus        12 tgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~------~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen   12 TGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEP------VRNSPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             ecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhh------hccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence            799999999999999986  355555543211111 11100      011478999999999999999999988999999


Q ss_pred             ecCCC----------------ChhhhHHHHHhCC---CCCeEEEeeccccccCCCCCCCC-CCCCCCCCCcc-cchHHHH
Q 025702           78 DINGR----------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC-ETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        78 ~~~~~----------------~~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~-e~~~~~~~~~~-~~k~~~e  136 (249)
                      |+|+.                ++-.+..++++++   ++++|||+||..|||+....... |...+.|.++| ++|+++|
T Consensus        86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE  165 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE  165 (331)
T ss_pred             hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence            99875                3446788999977   78999999999999987776655 88889999999 9999999


Q ss_pred             HHHh----hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCc
Q 025702          137 SVLE----SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (249)
Q Consensus       137 ~~~~----~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (249)
                      ..++    +++++++++|.++||||++.. ..++.|+.....+.+.++.|++.+.++++|++|+++++..+++... .|+
T Consensus       166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~-~ge  244 (331)
T KOG0747|consen  166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE-LGE  244 (331)
T ss_pred             HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC-ccc
Confidence            9874    578999999999999998754 5788888888889999999999999999999999999999998844 699


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCCccccccCCCC
Q 025702          212 VFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMP  247 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~~~~~~  247 (249)
                      +|||+++..++..|+++.+++.+.+..+++...+.+
T Consensus       245 IYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~  280 (331)
T KOG0747|consen  245 IYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFI  280 (331)
T ss_pred             eeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcc
Confidence            999999999999999999999998766655555443

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=8.6e-33  Score=220.05  Aligned_cols=210  Identities=20%  Similarity=0.210  Sum_probs=178.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|+++++.|+++|++|++++|.                          .+|+.|.+.+.++++..++|+|||++
T Consensus         5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         5 TGANGQLGRELVQQLSPEGRVVVALTSS--------------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             EcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            6999999999999999999999999885                          24888999999999866789999998


Q ss_pred             CCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +..                ..++.+++++++ ...+||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++..
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence            752                124777888876 3348999999999987767788888888888888 9999999999888


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      +.+++++||+++||++....+...++..+..+.++...++  ..++++|++|+++++..+++.+...+++||+++++.+|
T Consensus       139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s  216 (287)
T TIGR01214       139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS  216 (287)
T ss_pred             CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcC
Confidence            9999999999999997545566667777777776666553  56799999999999999998864457899999999999


Q ss_pred             HHHHHHHHHHHhCCCc
Q 025702          223 FDGLARACAKVTGYCI  238 (249)
Q Consensus       223 ~~~l~~~~~~~~g~~~  238 (249)
                      +.|+++.+.+.+|.+.
T Consensus       217 ~~e~~~~i~~~~~~~~  232 (287)
T TIGR01214       217 WYEFAQAIFEEAGADG  232 (287)
T ss_pred             HHHHHHHHHHHhCccc
Confidence            9999999999999653

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=4.7e-32  Score=218.69  Aligned_cols=233  Identities=22%  Similarity=0.280  Sum_probs=185.0

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      |||||++|++++++|++.|  ++|++++|...... ..+.     ... ..++++++.+|+.|++++.++++..++|+||
T Consensus         5 tGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         5 TGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-----DLE-DNPRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             EcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-----hhc-cCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999987  78998887432211 1100     000 0246889999999999999999855699999


Q ss_pred             ecCCCC----------------hhhhHHHHHhCC--CC-CeEEEeeccccccCCCCC-CCCCCCCCCCCCcc-cchHHHH
Q 025702           78 DINGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLL-PHCETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        78 ~~~~~~----------------~~~~~~~~~a~~--~~-~~~i~~Ss~~v~~~~~~~-~~~e~~~~~~~~~~-~~k~~~e  136 (249)
                      |+++..                ..++.++++++.  .. .++|++||..+||..... ++.|..+..|.+.| .+|..+|
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  158 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASD  158 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHH
Confidence            999752                224667888876  23 389999999999865433 57777777787777 9999999


Q ss_pred             HHHh----hcCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCc
Q 025702          137 SVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (249)
Q Consensus       137 ~~~~----~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (249)
                      .+++    +.+++++++||+.+|||... ..+++.++..+.++.++++++++.+.++++|++|+++++..++++.. .++
T Consensus       159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~~~  237 (317)
T TIGR01181       159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-VGE  237 (317)
T ss_pred             HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-CCc
Confidence            8764    46899999999999999753 45677788888888887777888889999999999999999998754 468


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCCccc
Q 025702          212 VFNISGEKYVTFDGLARACAKVTGYCIAG  240 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~g~~~~~  240 (249)
                      +||+++++.+++.|+++++.+.+|.+...
T Consensus       238 ~~~~~~~~~~s~~~~~~~i~~~~~~~~~~  266 (317)
T TIGR01181       238 TYNIGGGNERTNLEVVETILELLGKDEDL  266 (317)
T ss_pred             eEEeCCCCceeHHHHHHHHHHHhCCCccc
Confidence            99999999999999999999999965443

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=2.4e-32  Score=227.46  Aligned_cols=227  Identities=20%  Similarity=0.215  Sum_probs=176.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|++.|+++|++|++++|...........    .  ....+++++.+|+.+..     +.  ++|+|||+|
T Consensus       125 TGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~----~--~~~~~~~~i~~D~~~~~-----l~--~~D~ViHlA  191 (442)
T PLN02206        125 TGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH----H--FSNPNFELIRHDVVEPI-----LL--EVDQIYHLA  191 (442)
T ss_pred             ECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh----h--ccCCceEEEECCccChh-----hc--CCCEEEEee
Confidence            79999999999999999999999998754321111100    0  01246888889987653     33  799999999


Q ss_pred             CC----------------ChhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCC-----CCCCCCcc-cchHHHHH
Q 025702           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~e~  137 (249)
                      +.                |+.++.+++++|+ ...+||++||..+|+.....+.+|+.     +..+.+.| .+|..+|+
T Consensus       192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~  271 (442)
T PLN02206        192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAET  271 (442)
T ss_pred             eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHH
Confidence            74                2335788999987 22499999999999876555566653     33445567 99999999


Q ss_pred             HHh----hcCCcEEEeecceeeCCCC---CcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC
Q 025702          138 VLE----SKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (249)
Q Consensus       138 ~~~----~~~~~~~~~r~~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (249)
                      ++.    ..+++++++||+++|||+.   ....++.++.++..+.++.+++++.+.++|+|++|+|++++.++++..  +
T Consensus       272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~--~  349 (442)
T PLN02206        272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH--V  349 (442)
T ss_pred             HHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC--C
Confidence            774    4689999999999999973   235567777888888888888888899999999999999999987653  4


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCcccccc
Q 025702          211 QVFNISGEKYVTFDGLARACAKVTGYCIAGSVE  243 (249)
Q Consensus       211 ~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~~  243 (249)
                      +.||+++++.+|+.|+++.+.+.+|. ...+.+
T Consensus       350 g~yNIgs~~~~sl~Elae~i~~~~g~-~~~i~~  381 (442)
T PLN02206        350 GPFNLGNPGEFTMLELAKVVQETIDP-NAKIEF  381 (442)
T ss_pred             ceEEEcCCCceeHHHHHHHHHHHhCC-CCceee
Confidence            69999999999999999999999984 334443

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=3.7e-32  Score=218.28  Aligned_cols=212  Identities=21%  Similarity=0.229  Sum_probs=168.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|++.|++.|++|+++.+..                         .+|+.|.+.+.++++..++|+|||+|
T Consensus         3 tGa~GfiG~~l~~~L~~~g~~v~~~~~~~-------------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          3 AGHRGLVGSAIVRKLEALGFTNLVLRTHK-------------------------ELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             ccCCCcccHHHHHHHHhCCCcEEEeeccc-------------------------cCCCCCHHHHHHHHhccCCCEEEEee
Confidence            79999999999999999999888664321                         36999999999999877899999998


Q ss_pred             CCC-----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCC----CCCCCC-cc-cchHHH
Q 025702           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKS-RH-KGKLNT  135 (249)
Q Consensus        81 ~~~-----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~~-~~-~~k~~~  135 (249)
                      +..                 ..++.+++++|+  ++++||++||..+|+.....+++|+.    +..|.+ .| .+|..+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            641                 225778999987  68899999999999976667777775    444543 36 899999


Q ss_pred             HHHH----hhcCCcEEEeecceeeCCCCC-----cchHHHHHH----HHHcCCCeee-cCCCcceEeeeeHHHHHHHHHH
Q 025702          136 ESVL----ESKGVNWTSLRPVYIYGPLNY-----NPVEEWFFH----RLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       136 e~~~----~~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      |+++    +..+++++++||+++|||+..     ...++.++.    ....+.++.+ ++++.+.++++|++|++++++.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~  217 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF  217 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence            8765    356899999999999999742     223344433    3345555554 6788888999999999999999


Q ss_pred             HhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      ++++.. ..+.||+++++.+|+.|+++.+.+.+|.+.
T Consensus       218 ~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~  253 (306)
T PLN02725        218 LMRRYS-GAEHVNVGSGDEVTIKELAELVKEVVGFEG  253 (306)
T ss_pred             HHhccc-cCcceEeCCCCcccHHHHHHHHHHHhCCCC
Confidence            998754 346789999999999999999999999643

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.8e-32  Score=220.29  Aligned_cols=218  Identities=18%  Similarity=0.187  Sum_probs=163.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HH-HHHhhhh---CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DF-VKSSLSA---KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~-l~~~~~~---~~~   73 (249)
                      |||+||||++|+++|+++|++++++.|+......               ...+..+|+.|.   +. +..+++.   .++
T Consensus         5 tGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~---------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---------------FVNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             ecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH---------------HHhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            7999999999999999999988887776543110               011223455543   32 2333321   269


Q ss_pred             cEEEecCCC--------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHH
Q 025702           74 DVVYDINGR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        74 d~Vi~~~~~--------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (249)
                      |+|||+|+.              +..++.+++++|+  ++ +|||+||..+||.....+.+|+.+..|.+.| .+|..+|
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  148 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFD  148 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHH
Confidence            999999873              2335778999987  54 7999999999997655566777777888878 9999999


Q ss_pred             HHHhh----cCCcEEEeecceeeCCCCCc-c----hHHHHHHHHHcCCCeee-cCCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          137 SVLES----KGVNWTSLRPVYIYGPLNYN-P----VEEWFFHRLKAGRPIPI-PGSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       137 ~~~~~----~~~~~~~~r~~~v~g~~~~~-~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                      +++++    .+++++++||+++|||+... .    ....+...+.++....+ .+++...++++|++|++++++.+++.+
T Consensus       149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~  228 (308)
T PRK11150        149 EYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG  228 (308)
T ss_pred             HHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC
Confidence            87753    58899999999999997532 1    23344566666664433 356667899999999999999998865


Q ss_pred             CCCCceEEecCCccccHHHHHHHHHHHhCC
Q 025702          207 KASRQVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      .  +++||+++++.+|+.|+++.+.+.+|.
T Consensus       229 ~--~~~yni~~~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        229 V--SGIFNCGTGRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             C--CCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence            3  469999999999999999999999984

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=7.2e-32  Score=219.55  Aligned_cols=233  Identities=19%  Similarity=0.176  Sum_probs=180.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+||+|++++++|+++|++|++++|.+.... ..+.. ..........+++++.+|+.|.+.+.++++..++|+|||+
T Consensus        12 TGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~   90 (340)
T PLN02653         12 TGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDH-IYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDEVYNL   90 (340)
T ss_pred             ECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhh-hccccccccCceEEEEecCCCHHHHHHHHHHcCCCEEEEC
Confidence            799999999999999999999999998764311 11100 0000000124688999999999999999986678999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC--CCC-----eEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHH
Q 025702           80 NGRE----------------ADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (249)
                      |+..                ..++.++++++.  +++     +||++||..+||.... +..|+.+..|.+.| .+|..+
T Consensus        91 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~  169 (340)
T PLN02653         91 AAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAA  169 (340)
T ss_pred             CcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHH
Confidence            9851                235677888876  443     8999999999997654 77888888888888 999999


Q ss_pred             HHHHh----hcCCcEEEeecceeeCCCCCcch----HHHHHHHHHcCCCee-ecCCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          136 ESVLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       136 e~~~~----~~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                      |.+++    +.++.++..|+.++|||+....+    +..++..+..+.... ..+++.+.++|+|++|+|++++.++++.
T Consensus       170 e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~  249 (340)
T PLN02653        170 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE  249 (340)
T ss_pred             HHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC
Confidence            99874    45777888999999998643332    333445555666544 3488889999999999999999999875


Q ss_pred             CCCCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          207 KASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      .  ++.||+++++.+|+.|+++.+.+.+|.+
T Consensus       250 ~--~~~yni~~g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        250 K--PDDYVVATEESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             C--CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence            3  4689999999999999999999999964

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=7.6e-32  Score=220.06  Aligned_cols=229  Identities=16%  Similarity=0.194  Sum_probs=181.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||+++++.|+++|++|++++|++.......      ........++++.+|++|.+.+.++++..++|+|||++
T Consensus        10 tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622        10 TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLF------ELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHH------HHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            799999999999999999999999998865421110      00011246778999999999999999866789999999


Q ss_pred             CC----------------ChhhhHHHHHhCC--C-CCeEEEeeccccccCCC-CCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      +.                |..++.+++++++  + .+++|++||..+|+... ..++.|+.+..|.+.| .+|..+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622        84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence            84                2335778888876  4 67999999999998643 2356777777787778 9999999887


Q ss_pred             hh-----------cCCcEEEeecceeeCCCCC--cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          140 ES-----------KGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       140 ~~-----------~~~~~~~~r~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                      +.           .+++++++||+++|||++.  ..+++.++..+..+.++.+ +++.+.++|+|++|++++++.+++..
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~  242 (349)
T TIGR02622       164 ASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAEKL  242 (349)
T ss_pred             HHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHHHH
Confidence            43           2799999999999999742  3567788888888887766 56788999999999999999887642


Q ss_pred             ----CCCCceEEecCC--ccccHHHHHHHHHHHhCC
Q 025702          207 ----KASRQVFNISGE--KYVTFDGLARACAKVTGY  236 (249)
Q Consensus       207 ----~~~~~~~~i~~~--~~~s~~~l~~~~~~~~g~  236 (249)
                          ...++.||++++  +.++..++++.+.+.++.
T Consensus       243 ~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       243 FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG  278 (349)
T ss_pred             hhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence                123579999974  689999999999988763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=4.8e-33  Score=220.14  Aligned_cols=215  Identities=26%  Similarity=0.319  Sum_probs=166.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|++|++|.++|.+.|++|++++|.                          ..|+.|.+++.++++..++|+|||++
T Consensus         6 ~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~~~~~~~pd~Vin~a   59 (286)
T PF04321_consen    6 TGASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAKLLEAFKPDVVINCA   59 (286)
T ss_dssp             ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred             ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence            6999999999999999999999999776                          23889999999999988999999999


Q ss_pred             CCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +..                ...+.++.++|. ...++||+||..||+.....++.|++++.|.+.| .+|.++|+.+++.
T Consensus        60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred             eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            862                345777888887 5569999999999988888889999999999999 9999999999886


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC---CCceEEecCCc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA---SRQVFNISGEK  219 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~i~~~~  219 (249)
                      .-++.|+|++++||+ ...+++.+++..+.+++.+....  +..+++++++|+|+++..++++...   ..++||+++++
T Consensus       140 ~~~~~IlR~~~~~g~-~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  140 CPNALILRTSWVYGP-SGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             -SSEEEEEE-SEESS-SSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             cCCEEEEecceeccc-CCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence            669999999999999 44578888899999999888765  4778999999999999999987532   45799999999


Q ss_pred             cccHHHHHHHHHHHhCCCccccccC
Q 025702          220 YVTFDGLARACAKVTGYCIAGSVEH  244 (249)
Q Consensus       220 ~~s~~~l~~~~~~~~g~~~~~~~~~  244 (249)
                      .+|+.|+++.+++.+|.+...+...
T Consensus       217 ~~S~~e~~~~i~~~~~~~~~~i~~~  241 (286)
T PF04321_consen  217 RVSRYEFAEAIAKILGLDPELIKPV  241 (286)
T ss_dssp             -EEHHHHHHHHHHHHTHCTTEEEEE
T ss_pred             ccCHHHHHHHHHHHhCCCCceEEec
Confidence            9999999999999999776444443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=9.4e-32  Score=236.15  Aligned_cols=230  Identities=23%  Similarity=0.328  Sum_probs=184.0

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCcc-ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      ||||||||++|++.|+++  +++|++++|..... ...+..      .....+++++.+|+.|.+.+..++...++|+||
T Consensus        12 TGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260         12 TGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP------SKSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             ECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh------cccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            799999999999999998  68999998753110 100000      001257899999999998888877555899999


Q ss_pred             ecCCCC----------------hhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCC---CCCCCCCCCCCcc-cchHH
Q 025702           78 DINGRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLP---HCETDTVDPKSRH-KGKLN  134 (249)
Q Consensus        78 ~~~~~~----------------~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~---~~e~~~~~~~~~~-~~k~~  134 (249)
                      |+|+..                +.++.+++++++  + +++|||+||..+||.....+   ..|+.+..|.+.| .+|..
T Consensus        86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  165 (668)
T PLN02260         86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG  165 (668)
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence            999852                234678899977  4 78999999999998754322   3466666777777 99999


Q ss_pred             HHHHHh----hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          135 TESVLE----SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       135 ~e~~~~----~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      +|.+++    +.+++++++||+++|||++.. .+++.++..+..+.++.+++++.+.++|+|++|+|+++..+++... .
T Consensus       166 aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-~  244 (668)
T PLN02260        166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-V  244 (668)
T ss_pred             HHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence            999874    358999999999999998643 4667777777888888888888899999999999999999987654 4


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          210 RQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       210 ~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      +++||+++++.+|+.|+++.+.+.+|.+
T Consensus       245 ~~vyni~~~~~~s~~el~~~i~~~~g~~  272 (668)
T PLN02260        245 GHVYNIGTKKERRVIDVAKDICKLFGLD  272 (668)
T ss_pred             CCEEEECCCCeeEHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999964

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.3e-31  Score=205.35  Aligned_cols=207  Identities=23%  Similarity=0.240  Sum_probs=184.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||++|++|++|++.|. .+++|++++|..                          .|++|.+.+.+++++.+||+|||+|
T Consensus         6 ~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           6 TGANGQLGTELRRALP-GEFEVIATDRAE--------------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             EcCCChHHHHHHHHhC-CCceEEeccCcc--------------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            7999999999999998 779999998873                          4999999999999999999999999


Q ss_pred             CCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +..                ..+..++.++|+ -..++||+||..||......++.|++.+.|.+.| .+|+..|..+++.
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence            862                346788888888 4569999999999998888899999999999999 9999999999999


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      +-+.+|+|.+++||... .++...++....+++.+....  ++..++++..|+|+++..++..... +++||+++...+|
T Consensus       139 ~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~~g~~S  214 (281)
T COG1091         139 GPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKE-GGVYHLVNSGECS  214 (281)
T ss_pred             CCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhcccc-CcEEEEeCCCccc
Confidence            99999999999999864 677888888889998888764  4888999999999999999988764 4499999999899


Q ss_pred             HHHHHHHHHHHhCCCc
Q 025702          223 FDGLARACAKVTGYCI  238 (249)
Q Consensus       223 ~~~l~~~~~~~~g~~~  238 (249)
                      |.|+++.+.+.++.+.
T Consensus       215 wydfa~~I~~~~~~~~  230 (281)
T COG1091         215 WYEFAKAIFEEAGVDG  230 (281)
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            9999999999998654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.5e-31  Score=200.23  Aligned_cols=234  Identities=23%  Similarity=0.291  Sum_probs=190.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||.||||+||+..|..+||+|++++.-.......+-     . -.....++.+..|+..+     ++.  .+|.|||+|
T Consensus        33 tGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~-----~-~~~~~~fel~~hdv~~p-----l~~--evD~IyhLA   99 (350)
T KOG1429|consen   33 TGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLE-----H-WIGHPNFELIRHDVVEP-----LLK--EVDQIYHLA   99 (350)
T ss_pred             ecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcc-----h-hccCcceeEEEeechhH-----HHH--Hhhhhhhhc
Confidence            7999999999999999999999999976655322211     0 11146788888888765     555  889999998


Q ss_pred             CC----------------ChhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCC-----CCCCCCcc-cchHHHHH
Q 025702           81 GR----------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-----TVDPKSRH-KGKLNTES  137 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-----~~~~~~~~-~~k~~~e~  137 (249)
                      +.                |..++.+++..|+ -.+||++.||+.|||++..-|..|..     +..|.+.| ..|..+|.
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~  179 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAET  179 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHH
Confidence            76                3346777777766 45899999999999987665555553     45567778 99999999


Q ss_pred             HH----hhcCCcEEEeecceeeCCCC---CcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC
Q 025702          138 VL----ESKGVNWTSLRPVYIYGPLN---YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (249)
Q Consensus       138 ~~----~~~~~~~~~~r~~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (249)
                      ++    ++.++.+.|.|+.+.|||..   .+.....+..+..++.++.++++|.+.++|.++.|+++.++++++.+..  
T Consensus       180 L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~--  257 (350)
T KOG1429|consen  180 LCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR--  257 (350)
T ss_pred             HHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc--
Confidence            87    46789999999999999973   4567888899999999999999999999999999999999999999864  


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCccccccCCCCCC
Q 025702          211 QVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD  249 (249)
Q Consensus       211 ~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~~~~~~~~  249 (249)
                      +-+||++++.+|+.|+++++.+..+-+.....+.+.|||
T Consensus       258 ~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Dd  296 (350)
T KOG1429|consen  258 GPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDD  296 (350)
T ss_pred             CCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCC
Confidence            459999999999999999999999855556666676665

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=3.8e-31  Score=216.40  Aligned_cols=230  Identities=20%  Similarity=0.235  Sum_probs=179.6

Q ss_pred             CCCcccchHHHHHHHHHcCCe-EEEEecCCCccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||||++++++|+++|++ |+++++...... ....     . ......++++.+|++|.+++.++++..++|+|||
T Consensus         6 TGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          6 TGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-----D-VSDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             ECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-----h-cccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999976 555555332110 0000     0 0002457889999999999999998667999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC-----------CCCeEEEeeccccccCCC---------C-CCCCCCC
Q 025702           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSD---------L-LPHCETD  121 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~-----------~~~~~i~~Ss~~v~~~~~---------~-~~~~e~~  121 (249)
                      +|+..                ..++.+++++|+           +.++||++||..+|+...         . .+++|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT  159 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence            99752                235788888874           246899999999998531         1 1356777


Q ss_pred             CCCCCCcc-cchHHHHHHHh----hcCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      +..|.+.| .+|..+|.+++    ..+++++++|++.+|||+.. ..+++.++..+..+..+.+++++++.++++|++|+
T Consensus       160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (352)
T PRK10084        160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (352)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence            77888888 99999998774    45889999999999999853 34566677777777777878888899999999999


Q ss_pred             HHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      ++++..+++++. .++.||+++++.+|+.++++.+++.+|..
T Consensus       240 a~a~~~~l~~~~-~~~~yni~~~~~~s~~~~~~~i~~~~~~~  280 (352)
T PRK10084        240 ARALYKVVTEGK-AGETYNIGGHNEKKNLDVVLTICDLLDEI  280 (352)
T ss_pred             HHHHHHHHhcCC-CCceEEeCCCCcCcHHHHHHHHHHHhccc
Confidence            999999988654 47899999999999999999999999853

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=1.2e-30  Score=213.50  Aligned_cols=238  Identities=19%  Similarity=0.260  Sum_probs=178.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|+++++.|+++|++|++++|.......... ...........+++++.+|++|.+.+..+++..++|+|||++
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a   89 (352)
T PLN02240         11 TGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALR-RVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFA   89 (352)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHH-HHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEEEEcc
Confidence            6999999999999999999999999876433110000 000000001246889999999999999998766899999998


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +..                ..++.+++++++  ++++||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  169 (352)
T PLN02240         90 GLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRD  169 (352)
T ss_pred             ccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            742                234667888876  6789999999999987667788899888888888 999999998742


Q ss_pred             -----cCCcEEEeecceeeCCCCC----------cchHHHHHHHHHcCC--CeeecC------CCcceEeeeeHHHHHHH
Q 025702          142 -----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDLARA  198 (249)
Q Consensus       142 -----~~~~~~~~r~~~v~g~~~~----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~a~~  198 (249)
                           .+++++++|++++||+...          ...+..++..+..+.  .+.+++      ++.+.++|+|++|+|++
T Consensus       170 ~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a  249 (352)
T PLN02240        170 IHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADG  249 (352)
T ss_pred             HHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHH
Confidence                 3678999999999996421          111222344444333  344443      56788999999999999


Q ss_pred             HHHHhcCC----CCCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          199 FVQVLGNE----KASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       199 ~~~~~~~~----~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      ++.++++.    ...+++||+++++.+|++|+++.+.+.+|.+.+
T Consensus       250 ~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~  294 (352)
T PLN02240        250 HIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIP  294 (352)
T ss_pred             HHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCC
Confidence            99888642    234589999999999999999999999996543

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.5e-31  Score=215.41  Aligned_cols=205  Identities=20%  Similarity=0.232  Sum_probs=162.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++++++|+++||+|++++|++.+.. .+.          ..+++++.+|+.|++.+.++++  ++|+|||++
T Consensus         6 tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~l~----------~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~   72 (317)
T CHL00194          6 IGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-FLK----------EWGAELVYGDLSLPETLPPSFK--GVTAIIDAS   72 (317)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-hHh----------hcCCEEEECCCCCHHHHHHHHC--CCCEEEECC
Confidence            799999999999999999999999999865421 111          2478999999999999999998  999999986


Q ss_pred             CC-----------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhcCCcE
Q 025702           81 GR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNW  146 (249)
Q Consensus        81 ~~-----------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~  146 (249)
                      +.           +..++.+++++++  +++|||++||.++..             .+...+ .+|..+|+++++.++++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------------~~~~~~~~~K~~~e~~l~~~~l~~  139 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------------YPYIPLMKLKSDIEQKLKKSGIPY  139 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------------cCCChHHHHHHHHHHHHHHcCCCe
Confidence            53           2335688999987  889999999865420             111234 78999999999999999


Q ss_pred             EEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHH
Q 025702          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGL  226 (249)
Q Consensus       147 ~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l  226 (249)
                      +++||+.+|+..     ...+......+.++.. .++.+.++++|++|+|++++.+++++...+++||+++++.+|+.|+
T Consensus       140 tilRp~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el  213 (317)
T CHL00194        140 TIFRLAGFFQGL-----ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEI  213 (317)
T ss_pred             EEEeecHHhhhh-----hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHH
Confidence            999999887641     2222222223444444 3455678999999999999999988766789999999999999999


Q ss_pred             HHHHHHHhCCC
Q 025702          227 ARACAKVTGYC  237 (249)
Q Consensus       227 ~~~~~~~~g~~  237 (249)
                      ++.+.+.+|.+
T Consensus       214 ~~~~~~~~g~~  224 (317)
T CHL00194        214 ISLCEQLSGQK  224 (317)
T ss_pred             HHHHHHHhCCC
Confidence            99999999964

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.98  E-value=2.1e-30  Score=208.83  Aligned_cols=223  Identities=30%  Similarity=0.424  Sum_probs=181.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCC-cEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF-DVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~-d~Vi~~   79 (249)
                      ||||||+|++|++.|+++||+|++++|...+.....            .++.++.+|++|.+.+.+..+  .. |+|||+
T Consensus         6 tG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~--~~~d~vih~   71 (314)
T COG0451           6 TGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAK--GVPDAVIHL   71 (314)
T ss_pred             EcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHh--cCCCEEEEc
Confidence            799999999999999999999999999877632211            367889999999888888887  55 999999


Q ss_pred             CCCC-----------------hhhhHHHHHhCC--CCCeEEEeeccccccCC-CCCCCCCC-CCCCCCCcc-cchHHHHH
Q 025702           80 NGRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCET-DTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        80 ~~~~-----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~-~~~~~~~~~-~~k~~~e~  137 (249)
                      ++..                 +.++.+++++++  ++++|||.||..+++.. ...+.+|+ .+..|.+.| .+|..+|+
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence            8752                 234788899987  79999998888887754 33367777 577777767 99999999


Q ss_pred             HHhh----cCCcEEEeecceeeCCCCCcc----hHHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          138 VLES----KGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       138 ~~~~----~~~~~~~~r~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      .++.    .+++++++||+++|||+....    ....++.....+.+ ....+++...++++|++|++++++.+++++..
T Consensus       152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  231 (314)
T COG0451         152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG  231 (314)
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence            9854    359999999999999986553    44455556666765 56666777888999999999999999999875


Q ss_pred             CCceEEecCCc-cccHHHHHHHHHHHhCCCcc
Q 025702          209 SRQVFNISGEK-YVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       209 ~~~~~~i~~~~-~~s~~~l~~~~~~~~g~~~~  239 (249)
                      .  .||+++++ ..++.|+++.+.+.+|.+.+
T Consensus       232 ~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~  261 (314)
T COG0451         232 G--VFNIGSGTAEITVRELAEAVAEAVGSKAP  261 (314)
T ss_pred             c--EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence            3  99999997 89999999999999997644

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.98  E-value=2.8e-30  Score=210.21  Aligned_cols=231  Identities=23%  Similarity=0.332  Sum_probs=173.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+||+|+++++.|+++|++|++++|........+.     .+.. ...++.++.+|++|.+++.++++..++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          6 TGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLP-----VIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHH-----HHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999875433211100     0011 023577889999999999998876679999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCC-CCCCcc-cchHHHHHHH
Q 025702           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-DPKSRH-KGKLNTESVL  139 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-~~~~~~-~~k~~~e~~~  139 (249)
                      ++..                ..++.+++++|+  ++++||++||..+||.....+++|+.+. .|...| .+|..+|.++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            8742                124677888877  6789999999999987666677888775 567777 9999999987


Q ss_pred             hh-----cCCcEEEeecceeeCCCCC-----------cchHHHHHHHHHcCC--CeeecC------CCcceEeeeeHHHH
Q 025702          140 ES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGR--PIPIPG------SGIQVTQLGHVKDL  195 (249)
Q Consensus       140 ~~-----~~~~~~~~r~~~v~g~~~~-----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~D~  195 (249)
                      ++     .+++++++|++.+||+...           ..+++. +..+..+.  .+.+++      ++.+.++++|++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPY-IAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHH-HHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence            53     3688999999999996310           112233 33333322  233333      56778999999999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      |++++.+++..  ...+++||+++++.+|+.|+++.+.+.+|.+
T Consensus       240 a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~  283 (338)
T PRK10675        240 ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKP  283 (338)
T ss_pred             HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCC
Confidence            99999998752  2335799999999999999999999999964

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.98  E-value=2.7e-30  Score=208.27  Aligned_cols=222  Identities=22%  Similarity=0.284  Sum_probs=169.4

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh--CCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~--~~~d~Vi   77 (249)
                      ||||||+|+++++.|+++|+ +|++++|.....  .+..          -....+..|+.+.+.++.+.+.  .++|+||
T Consensus         4 tGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         4 TGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLN----------LADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             eCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhh----------hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            79999999999999999997 788887765331  1110          1123456788887777665531  3899999


Q ss_pred             ecCCCC--------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCC-CCCCCcc-cchHHHHHHHh
Q 025702           78 DINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDT-VDPKSRH-KGKLNTESVLE  140 (249)
Q Consensus        78 ~~~~~~--------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~-~~~~~~~-~~k~~~e~~~~  140 (249)
                      |+++..              ..++.+++++|+ ...+||++||..+|+.... ++.|+.+ ..|.+.| .+|..+|.+++
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~  150 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVR  150 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHH
Confidence            999742              345778888876 3348999999999987543 4555554 3477778 99999998875


Q ss_pred             h------cCCcEEEeecceeeCCCCC-----cchHHHHHHHHHcCCCeeec------CCCcceEeeeeHHHHHHHHHHHh
Q 025702          141 S------KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       141 ~------~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +      .+++++++|++.+|||+..     ..++..++..+..+.++.+.      +++.+.++++|++|+++++..++
T Consensus       151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~  230 (314)
T TIGR02197       151 RRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLL  230 (314)
T ss_pred             HHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHH
Confidence            3      2468999999999999743     23455667777777766543      45677899999999999999999


Q ss_pred             cCCCCCCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      ..  ..+++||+++++++|+.|+++.+.+.+|.+
T Consensus       231 ~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~  262 (314)
T TIGR02197       231 EN--GVSGIFNLGTGRARSFNDLADAVFKALGKD  262 (314)
T ss_pred             hc--ccCceEEcCCCCCccHHHHHHHHHHHhCCC
Confidence            88  246799999999999999999999999964

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02214 cinnamoyl-CoA reductase

Probab=99.97  E-value=2.2e-30  Score=210.55  Aligned_cols=223  Identities=19%  Similarity=0.247  Sum_probs=166.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||+|++++++|+++|++|++++|+.........    ..+.....+++++.+|++|.+.+.++++  ++|+|||++
T Consensus        16 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~A   89 (342)
T PLN02214         16 TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHL----RELEGGKERLILCKADLQDYEALKAAID--GCDGVFHTA   89 (342)
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHH----HHhhCCCCcEEEEecCcCChHHHHHHHh--cCCEEEEec
Confidence            7999999999999999999999999997653110000    0001112368889999999999999998  899999999


Q ss_pred             CCC-----------hhhhHHHHHhCC--CCCeEEEeecc-ccccCCCC---CCCCCCC------CCCCCCcc-cchHHHH
Q 025702           81 GRE-----------ADEVEPILDALP--NLEQFIYCSSA-GVYLKSDL---LPHCETD------TVDPKSRH-KGKLNTE  136 (249)
Q Consensus        81 ~~~-----------~~~~~~~~~a~~--~~~~~i~~Ss~-~v~~~~~~---~~~~e~~------~~~~~~~~-~~k~~~e  136 (249)
                      +..           +.++.+++++++  ++++||++||. .+||....   .+++|+.      +..|.+.| .+|..+|
T Consensus        90 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE  169 (342)
T PLN02214         90 SPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAE  169 (342)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHH
Confidence            752           346888999977  77899999996 58875322   2356653      23456667 9999999


Q ss_pred             HHHh----hcCCcEEEeecceeeCCCCCc---chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          137 SVLE----SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       137 ~~~~----~~~~~~~~~r~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      +++.    +.+++++++||+++|||+...   .....++ ....+.... .+  +..++|+|++|+|++++.+++++.. 
T Consensus       170 ~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~~--~~~~~~i~V~Dva~a~~~al~~~~~-  244 (342)
T PLN02214        170 QAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-YA--NLTQAYVDVRDVALAHVLVYEAPSA-  244 (342)
T ss_pred             HHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-CC--CCCcCeeEHHHHHHHHHHHHhCccc-
Confidence            9874    458999999999999997532   1222333 233343322 23  3568999999999999999988653 


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhC
Q 025702          210 RQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       210 ~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      ++.||+++ ..+++.|+++.+.+.++
T Consensus       245 ~g~yn~~~-~~~~~~el~~~i~~~~~  269 (342)
T PLN02214        245 SGRYLLAE-SARHRGEVVEILAKLFP  269 (342)
T ss_pred             CCcEEEec-CCCCHHHHHHHHHHHCC
Confidence            56899987 56899999999999986

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=6.1e-30  Score=198.97  Aligned_cols=225  Identities=18%  Similarity=0.201  Sum_probs=165.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++|++.||++||+|++++|++++....   .....+.....+...+.+|+.|++++..+++  +||.|||+|
T Consensus        12 TGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~---~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdgVfH~A   86 (327)
T KOG1502|consen   12 TGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT---EHLRKLEGAKERLKLFKADLLDEGSFDKAID--GCDGVFHTA   86 (327)
T ss_pred             eCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH---HHHHhcccCcccceEEeccccccchHHHHHh--CCCEEEEeC
Confidence            79999999999999999999999999999872110   0000111113458899999999999999999  999999998


Q ss_pred             CC---------------ChhhhHHHHHhCC---CCCeEEEeeccccccCC-----CCCCCCCCCCC------CCCCcc-c
Q 025702           81 GR---------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS-----DLLPHCETDTV------DPKSRH-K  130 (249)
Q Consensus        81 ~~---------------~~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~-----~~~~~~e~~~~------~~~~~~-~  130 (249)
                      ..               .+.++.+++++|.   .++|+|+.||..+...+     ....++|+.-.      ....+| .
T Consensus        87 sp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~  166 (327)
T KOG1502|consen   87 SPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYAL  166 (327)
T ss_pred             ccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHH
Confidence            76               2457999999987   48999999997775432     12233333211      112346 8


Q ss_pred             chHHHHHHH----hhcCCcEEEeecceeeCCCCCc--chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       131 ~k~~~e~~~----~~~~~~~~~~r~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      +|..+|+..    ++.+++.+.+.|+.|+||....  +.....+....+|..-..   ......|+|++|+|.+.+.+++
T Consensus       167 sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~---~n~~~~~VdVrDVA~AHv~a~E  243 (327)
T KOG1502|consen  167 SKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY---PNFWLAFVDVRDVALAHVLALE  243 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC---CCCceeeEeHHHHHHHHHHHHc
Confidence            999999865    5678999999999999997544  222334444455533222   2234559999999999999999


Q ss_pred             CCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          205 NEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      .+... ++|.+.+ +.+++.|+++++.+.+.
T Consensus       244 ~~~a~-GRyic~~-~~~~~~ei~~~l~~~~P  272 (327)
T KOG1502|consen  244 KPSAK-GRYICVG-EVVSIKEIADILRELFP  272 (327)
T ss_pred             CcccC-ceEEEec-CcccHHHHHHHHHHhCC
Confidence            99864 5887766 44669999999999985

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.97  E-value=1e-29  Score=206.72  Aligned_cols=227  Identities=21%  Similarity=0.263  Sum_probs=162.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++|+++|+++|++|++++|++.........   ..+ ...++++++.+|++|.+.+.+.++  ++|+|||+|
T Consensus        15 tG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A   88 (338)
T PLN00198         15 IGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHL---RAL-QELGDLKIFGADLTDEESFEAPIA--GCDLVFHVA   88 (338)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH---Hhc-CCCCceEEEEcCCCChHHHHHHHh--cCCEEEEeC
Confidence            79999999999999999999999999886442110000   000 001368899999999999999998  899999999


Q ss_pred             CCC---------------hhhhHHHHHhCC---CCCeEEEeeccccccCCC----CCCCCCCC---------CCCCCCcc
Q 025702           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD----LLPHCETD---------TVDPKSRH  129 (249)
Q Consensus        81 ~~~---------------~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~~----~~~~~e~~---------~~~~~~~~  129 (249)
                      +..               ..++.++++++.   ++++||++||..+|+...    ..+.+|+.         +..|.+.|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y  168 (338)
T PLN00198         89 TPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGY  168 (338)
T ss_pred             CCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchh
Confidence            741               224667888864   478999999999998432    22334431         23456667


Q ss_pred             -cchHHHHHHHh----hcCCcEEEeecceeeCCCCCc---chHHHHHHHHHcCCCeeecC-CCcc----eEeeeeHHHHH
Q 025702          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPG-SGIQ----VTQLGHVKDLA  196 (249)
Q Consensus       130 -~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~i~~~D~a  196 (249)
                       .+|..+|.+++    +.+++++++||+++|||+...   ..+. ++..+..+..+...+ ++.+    .++|+|++|++
T Consensus       169 ~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a  247 (338)
T PLN00198        169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITHVEDVC  247 (338)
T ss_pred             HHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeEHHHHH
Confidence             99999998764    468999999999999997432   2221 233445555544433 2222    36999999999


Q ss_pred             HHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCC
Q 025702          197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      ++++.+++.+.. ++.| ++++..+|+.++++.+.+.++.
T Consensus       248 ~a~~~~~~~~~~-~~~~-~~~~~~~s~~el~~~i~~~~~~  285 (338)
T PLN00198        248 RAHIFLAEKESA-SGRY-ICCAANTSVPELAKFLIKRYPQ  285 (338)
T ss_pred             HHHHHHhhCcCc-CCcE-EEecCCCCHHHHHHHHHHHCCC
Confidence            999999987643 3467 4556779999999999998863

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.97  E-value=4.8e-29  Score=202.03  Aligned_cols=232  Identities=22%  Similarity=0.325  Sum_probs=176.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|++|+++++.|+++|++|++++|...........     ... ..+++++.+|+.+.+.+.++++..++|+|||++
T Consensus         5 ~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         5 TGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKR-----GER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             eCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhh-----hcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            79999999999999999999999887644332211110     000 125778899999999999998766899999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +..                ..++.++++++.  +.+++|++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~  158 (328)
T TIGR01179        79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRD  158 (328)
T ss_pred             cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHH
Confidence            752                234677888876  6789999999999987766678888888888878 999999987742


Q ss_pred             -----cCCcEEEeecceeeCCCCC----------cchHHHHHHHHH-cCCCeeec------CCCcceEeeeeHHHHHHHH
Q 025702          142 -----KGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLK-AGRPIPIP------GSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       142 -----~~~~~~~~r~~~v~g~~~~----------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~~~D~a~~~  199 (249)
                           .+++++++||+.+||+...          ..+++.+..... ....+.+.      +++...++|+|++|+++++
T Consensus       159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~  238 (328)
T TIGR01179       159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAH  238 (328)
T ss_pred             HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHH
Confidence                 6889999999999998521          123333333332 22333332      2456778999999999999


Q ss_pred             HHHhcCC--CCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          200 VQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      ..++...  ...++.||+++++++|+.|+++.+.+.+|.+.
T Consensus       239 ~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~  279 (328)
T TIGR01179       239 LAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDF  279 (328)
T ss_pred             HHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCc
Confidence            9999753  23468999999999999999999999999654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=3.7e-29  Score=202.48  Aligned_cols=224  Identities=17%  Similarity=0.177  Sum_probs=165.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||+++++.|+++|++|++++|++...... ..  .........+++++.+|++|.+.+.++++  ++|+|||+|
T Consensus        11 tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~--~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~A   85 (325)
T PLN02989         11 TGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT-DH--LLALDGAKERLKLFKADLLDEGSFELAID--GCETVFHTA   85 (325)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH-HH--HHhccCCCCceEEEeCCCCCchHHHHHHc--CCCEEEEeC
Confidence            79999999999999999999999999886542110 00  00000012468899999999999999998  899999999


Q ss_pred             CCC----------------hhhhHHHHHhCC---CCCeEEEeeccccccCCC-----CCCCCCCCCCCCC------Ccc-
Q 025702           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSD-----LLPHCETDTVDPK------SRH-  129 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~~-----~~~~~e~~~~~~~------~~~-  129 (249)
                      +..                ..++.++++++.   +.++||++||..+|+...     ..+++|+.+..|.      +.| 
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  165 (325)
T PLN02989         86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV  165 (325)
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence            841                224667788764   357999999988875422     2346777665542      456 


Q ss_pred             cchHHHHHHHh----hcCCcEEEeecceeeCCCCCc--chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       130 ~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      .+|..+|.+++    ..+++++++||+++|||+...  .+...++..+..++...  +  .+.++|+|++|+|++++.++
T Consensus       166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHh
Confidence            99999998874    468999999999999997532  24444555555554321  2  23478999999999999999


Q ss_pred             cCCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +++.. +++||++ +..+|+.|+++++.+.++
T Consensus       242 ~~~~~-~~~~ni~-~~~~s~~ei~~~i~~~~~  271 (325)
T PLN02989        242 ETPSA-NGRYIID-GPVVTIKDIENVLREFFP  271 (325)
T ss_pred             cCccc-CceEEEe-cCCCCHHHHHHHHHHHCC
Confidence            88653 5689995 568999999999999997

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=2.5e-29  Score=203.33  Aligned_cols=225  Identities=16%  Similarity=0.202  Sum_probs=164.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++++++|+++|++|++++|+...... ... . .......++++++.+|+.|.+.+..+++  ++|+|||+|
T Consensus        10 tGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~-~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   84 (322)
T PLN02662         10 TGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK-TEH-L-LALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVFHTA   84 (322)
T ss_pred             ECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh-HHH-H-HhccCCCCceEEEeccccCcchHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999997653110 000 0 0000012478899999999999999998  899999998


Q ss_pred             CC---------------ChhhhHHHHHhCC---CCCeEEEeeccc--cccCC---CCCCCCCCCCCCCC------Ccc-c
Q 025702           81 GR---------------EADEVEPILDALP---NLEQFIYCSSAG--VYLKS---DLLPHCETDTVDPK------SRH-K  130 (249)
Q Consensus        81 ~~---------------~~~~~~~~~~a~~---~~~~~i~~Ss~~--v~~~~---~~~~~~e~~~~~~~------~~~-~  130 (249)
                      +.               ++.++.++++++.   ++++||++||.+  +|+..   ...+.+|+.+..|.      +.| .
T Consensus        85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  164 (322)
T PLN02662         85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL  164 (322)
T ss_pred             CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence            74               1235677888764   578999999976  46532   22346666554442      346 8


Q ss_pred             chHHHHHHH----hhcCCcEEEeecceeeCCCCCc--chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       131 ~k~~~e~~~----~~~~~~~~~~r~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      +|..+|+++    ++.+++++++||+++|||+...  .....++..+..+... .   +.+.++|+|++|+|++++.+++
T Consensus       165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT-F---PNASYRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc-C---CCCCcCeEEHHHHHHHHHHHhc
Confidence            999999876    3568999999999999997432  2333444444444432 1   2356899999999999999999


Q ss_pred             CCCCCCceEEecCCccccHHHHHHHHHHHhCC
Q 025702          205 NEKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      ++.. ++.||++ ++.+|+.|+++++.+.++.
T Consensus       241 ~~~~-~~~~~~~-g~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        241 IPSA-SGRYCLV-ERVVHYSEVVKILHELYPT  270 (322)
T ss_pred             CcCc-CCcEEEe-CCCCCHHHHHHHHHHHCCC
Confidence            8654 3578887 4779999999999999873

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=4.1e-29  Score=201.94  Aligned_cols=224  Identities=17%  Similarity=0.207  Sum_probs=163.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++++++|+++|++|++++|+...... .....  .......+++++.+|++|.+.+.++++  ++|+|||+|
T Consensus        11 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih~A   85 (322)
T PLN02986         11 TGASGYIASWIVKLLLLRGYTVKATVRDLTDRKK-TEHLL--ALDGAKERLKLFKADLLEESSFEQAIE--GCDAVFHTA   85 (322)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHH-HHHHH--hccCCCCceEEEecCCCCcchHHHHHh--CCCEEEEeC
Confidence            7999999999999999999999999998654211 00000  000012468999999999999999998  899999999


Q ss_pred             CCC---------------hhhhHHHHHhCC---CCCeEEEeeccccc--cCC---CCCCCCCCCCCC------CCCcc-c
Q 025702           81 GRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY--LKS---DLLPHCETDTVD------PKSRH-K  130 (249)
Q Consensus        81 ~~~---------------~~~~~~~~~a~~---~~~~~i~~Ss~~v~--~~~---~~~~~~e~~~~~------~~~~~-~  130 (249)
                      +..               +.++.+++++++   +++|||++||..+|  +..   ...+++|+....      +.+.| .
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  165 (322)
T PLN02986         86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL  165 (322)
T ss_pred             CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence            741               234677888865   47899999998764  332   123455554332      23556 9


Q ss_pred             chHHHHHHH----hhcCCcEEEeecceeeCCCCCc--chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       131 ~k~~~e~~~----~~~~~~~~~~r~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      +|..+|.++    ++.+++++++||+++|||+...  .....++..+..+...  .+  .+.++|+|++|+|++++.+++
T Consensus       166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~  241 (322)
T PLN02986        166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALE  241 (322)
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhc
Confidence            999999876    3468999999999999997432  2223444455555543  22  356799999999999999999


Q ss_pred             CCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          205 NEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      ++.. ++.||++ ++.+|+.|+++++.+.++
T Consensus       242 ~~~~-~~~yni~-~~~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        242 TPSA-NGRYIID-GPIMSVNDIIDILRELFP  270 (322)
T ss_pred             Cccc-CCcEEEe-cCCCCHHHHHHHHHHHCC
Confidence            8754 4589995 567999999999999987

>PLN02650 dihydroflavonol-4-reductase

Probab=99.97  E-value=4.6e-29  Score=203.88  Aligned_cols=226  Identities=19%  Similarity=0.231  Sum_probs=159.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++++++|+++|++|++++|+..........   .........++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        11 TGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~ViH~A   85 (351)
T PLN02650         11 TGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHL---LDLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVFHVA   85 (351)
T ss_pred             eCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHH---HhccCCCCceEEEEecCCChhhHHHHHh--CCCEEEEeC
Confidence            79999999999999999999999999976442110000   0000001358899999999999999998  899999998


Q ss_pred             CCC---------------hhhhHHHHHhCC--C-CCeEEEeeccccccCCC-CCC-CCCCCC---------CCCCCcc-c
Q 025702           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSD-LLP-HCETDT---------VDPKSRH-K  130 (249)
Q Consensus        81 ~~~---------------~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~-~~~-~~e~~~---------~~~~~~~-~  130 (249)
                      +..               ..++.++++++.  + +++|||+||.++|+... ..+ ++|+..         ..|.+.| .
T Consensus        86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (351)
T PLN02650         86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV  165 (351)
T ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence            641               235678888876  4 67999999998776432 222 344421         1233456 9


Q ss_pred             chHHHHHHH----hhcCCcEEEeecceeeCCCCCcchHHHHHHHH--HcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          131 GKLNTESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       131 ~k~~~e~~~----~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      +|..+|.++    ++.+++++++||+++|||+........++..+  ..+.... .+. ...++|+|++|+|++++.+++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~  243 (351)
T PLN02650        166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFE  243 (351)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhc
Confidence            999999876    34689999999999999975432222222221  1222211 121 234799999999999999998


Q ss_pred             CCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          205 NEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       205 ~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      ++.. ++.| +++++.+|+.|+++++.+.++
T Consensus       244 ~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        244 HPAA-EGRY-ICSSHDATIHDLAKMLREKYP  272 (351)
T ss_pred             CcCc-CceE-EecCCCcCHHHHHHHHHHhCc
Confidence            7653 4478 566688999999999999886

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=1.1e-29  Score=194.51  Aligned_cols=240  Identities=25%  Similarity=0.321  Sum_probs=189.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||.||||+|.+.+|++.|+.|+++++-.+.....+..  -+++..-..++.++.+|++|.++|+++|+..++|.|+|+|
T Consensus         8 tGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r--~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa   85 (343)
T KOG1371|consen    8 TGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKR--VRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMHFA   85 (343)
T ss_pred             ecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHH--HHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEeeh
Confidence            79999999999999999999999999876653221111  0111111478999999999999999999999999999998


Q ss_pred             CC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCC-CCCcc-cchHHHHHHHh
Q 025702           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRH-KGKLNTESVLE  140 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~-~~~~~-~~k~~~e~~~~  140 (249)
                      +.                +..++.++++.|+  +++.+||+||+.+||.+...|++|+.+.. |.++| .+|...|+++.
T Consensus        86 ~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~  165 (343)
T KOG1371|consen   86 ALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIH  165 (343)
T ss_pred             hhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHH
Confidence            75                3457999999987  89999999999999999999999999988 99999 99999999984


Q ss_pred             ----hcCCcEEEeecceeeC--CC---------CCcchHHHHHHHHH---------cCCCeeecCCCcceEeeeeHHHHH
Q 025702          141 ----SKGVNWTSLRPVYIYG--PL---------NYNPVEEWFFHRLK---------AGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       141 ----~~~~~~~~~r~~~v~g--~~---------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                          ...+..+.+|.++++|  |.         ...+.++. ..+..         -+..... .+++..++++|+-|+|
T Consensus       166 d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~-v~~vaigr~~~l~v~g~d~~t-~dgt~vrdyi~v~Dla  243 (343)
T KOG1371|consen  166 DYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPY-VFQVAIGRRPNLQVVGRDYTT-IDGTIVRDYIHVLDLA  243 (343)
T ss_pred             hhhccccceEEEEEeccccCccccCccCCCCccCccccccc-ccchhhcccccceeecCcccc-cCCCeeecceeeEehH
Confidence                3458899999999998  32         12223321 11111         1222222 3457789999999999


Q ss_pred             HHHHHHhcCCCC--CCceEEecCCccccHHHHHHHHHHHhCCCccccccC
Q 025702          197 RAFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEH  244 (249)
Q Consensus       197 ~~~~~~~~~~~~--~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~~~  244 (249)
                      +..+.++.....  .-++||+.++...+..++..++++.+|.+.+.....
T Consensus       244 ~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~  293 (343)
T KOG1371|consen  244 DGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP  293 (343)
T ss_pred             HHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC
Confidence            999999987542  335999999999999999999999999776654443

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.97  E-value=3.4e-28  Score=197.12  Aligned_cols=221  Identities=20%  Similarity=0.296  Sum_probs=168.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||+|+++++.|+++|++|++++|++.... .+.          ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus         6 tG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~----------~~~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a   72 (328)
T TIGR03466         6 TGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-NLE----------GLDVEIVEGDLRDPASLRKAVA--GCRALFHVA   72 (328)
T ss_pred             ECCccchhHHHHHHHHHCCCEEEEEEecCcccc-ccc----------cCCceEEEeeCCCHHHHHHHHh--CCCEEEEec
Confidence            799999999999999999999999999865421 111          2368899999999999999998  899999998


Q ss_pred             CC--------------ChhhhHHHHHhCC--CCCeEEEeeccccccC-CCCCCCCCCCCCCC---CCcc-cchHHHHHHH
Q 025702           81 GR--------------EADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDP---KSRH-KGKLNTESVL  139 (249)
Q Consensus        81 ~~--------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~---~~~~-~~k~~~e~~~  139 (249)
                      +.              +..++.++++++.  +++++|++||..+|+. ....+.+|+.+..|   ...| .+|..+|.++
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  152 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAA  152 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHH
Confidence            64              1335677888876  6889999999999985 34456777766554   3456 8999999887


Q ss_pred             hh----cCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEE
Q 025702          140 ES----KGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (249)
Q Consensus       140 ~~----~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  214 (249)
                      +.    .+++++++||+.+||++.... ....++.....+..... .+  ...+++|++|+|++++.+++++. .++.|+
T Consensus       153 ~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~  228 (328)
T TIGR03466       153 LEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAY-VD--TGLNLVHVDDVAEGHLLALERGR-IGERYI  228 (328)
T ss_pred             HHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCcee-eC--CCcceEEHHHHHHHHHHHHhCCC-CCceEE
Confidence            53    589999999999999975422 22223333333322222 22  33689999999999999998854 567787


Q ss_pred             ecCCccccHHHHHHHHHHHhCCCcc
Q 025702          215 ISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       215 i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      ++ ++.+|+.|+++.+.+.+|.+.+
T Consensus       229 ~~-~~~~s~~e~~~~i~~~~g~~~~  252 (328)
T TIGR03466       229 LG-GENLTLKQILDKLAEITGRPAP  252 (328)
T ss_pred             ec-CCCcCHHHHHHHHHHHhCCCCC
Confidence            75 6889999999999999996543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=9.5e-29  Score=203.56  Aligned_cols=214  Identities=23%  Similarity=0.254  Sum_probs=167.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC--CCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--~~d~Vi~   78 (249)
                      |||||++|++++++|+++|++|++++|+..+......   ........++++++.+|++|.+.+.++++..  ++|+|||
T Consensus        66 tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~  142 (390)
T PLN02657         66 VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNG---KEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVVVS  142 (390)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccch---hhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEEEE
Confidence            6999999999999999999999999998754211000   0001111357899999999999999999844  5999999


Q ss_pred             cCCCC-----------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh--c
Q 025702           79 INGRE-----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES--K  142 (249)
Q Consensus        79 ~~~~~-----------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~--~  142 (249)
                      +++..           ...+.+++++++  ++++||++||..+++              |...| .+|...|+.++.  .
T Consensus       143 ~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~~~sK~~~E~~l~~~~~  208 (390)
T PLN02657        143 CLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEFQRAKLKFEAELQALDS  208 (390)
T ss_pred             CCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHHHHHHHHHHHHHHhccC
Confidence            87631           235678899877  788999999988752              22234 789999988865  7


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcce-EeeeeHHHHHHHHHHHhcCCCCCCceEEecCC-cc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV-TQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KY  220 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~  220 (249)
                      +++++++||+.+|++      +..++..+..+.++.+++++... .++||++|+|++++.++.++...+++||++++ +.
T Consensus       209 gl~~tIlRp~~~~~~------~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~  282 (390)
T PLN02657        209 DFTYSIVRPTAFFKS------LGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKA  282 (390)
T ss_pred             CCCEEEEccHHHhcc------cHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcc
Confidence            899999999999986      22345566677777777887764 36899999999999999876666889999986 68


Q ss_pred             ccHHHHHHHHHHHhCCC
Q 025702          221 VTFDGLARACAKVTGYC  237 (249)
Q Consensus       221 ~s~~~l~~~~~~~~g~~  237 (249)
                      +|+.|+++++.+.+|.+
T Consensus       283 ~S~~Eia~~l~~~lG~~  299 (390)
T PLN02657        283 LTPLEQGEMLFRILGKE  299 (390)
T ss_pred             cCHHHHHHHHHHHhCCC
Confidence            99999999999999964

>PLN02686 cinnamoyl-CoA reductase

Probab=99.96  E-value=9.5e-29  Score=202.50  Aligned_cols=226  Identities=20%  Similarity=0.257  Sum_probs=163.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh------ccCceEEEEeccCCHHHHHHhhhhCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------FSSKILHLKGDRKDYDFVKSSLSAKGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~d~~d~~~l~~~~~~~~~d   74 (249)
                      |||+||||++++++|+++|++|++++|+...... +.     .+..      ...+++++.+|++|.+.+.++++  ++|
T Consensus        59 TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~-l~-----~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~~d  130 (367)
T PLN02686         59 TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEK-LR-----EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--GCA  130 (367)
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-----HHhhhccccccCCceEEEEcCCCCHHHHHHHHH--hcc
Confidence            7999999999999999999999999887543111 00     0000      01358889999999999999998  899


Q ss_pred             EEEecCCC----------------ChhhhHHHHHhCC---CCCeEEEeecc--ccccCC--CC--CCCCCCC------CC
Q 025702           75 VVYDINGR----------------EADEVEPILDALP---NLEQFIYCSSA--GVYLKS--DL--LPHCETD------TV  123 (249)
Q Consensus        75 ~Vi~~~~~----------------~~~~~~~~~~a~~---~~~~~i~~Ss~--~v~~~~--~~--~~~~e~~------~~  123 (249)
                      .|||+++.                +..++.+++++++   +++|||++||.  .+|+..  ..  ..+.|+.      +.
T Consensus       131 ~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~  210 (367)
T PLN02686        131 GVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCR  210 (367)
T ss_pred             EEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcc
Confidence            99999763                1235778999975   58899999996  477642  11  2234432      23


Q ss_pred             CCCCcc-cchHHHHHHHh----hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          124 DPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      .|.+.| .+|..+|.+++    ..+++++++||+++|||+........++ ....+. +.+++++.  ++++|++|++++
T Consensus       211 ~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~-~~~~g~-~~~~g~g~--~~~v~V~Dva~A  286 (367)
T PLN02686        211 DNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATI-AYLKGA-QEMLADGL--LATADVERLAEA  286 (367)
T ss_pred             cccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHH-HHhcCC-CccCCCCC--cCeEEHHHHHHH
Confidence            355567 99999999873    4689999999999999975322111222 233343 34445443  579999999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          199 FVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      ++.+++..  ...+++| +++++.+++.|+++.+.+.+|.+..
T Consensus       287 ~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~  328 (367)
T PLN02686        287 HVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN  328 (367)
T ss_pred             HHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC
Confidence            99999852  2345678 8888999999999999999996543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=3.7e-28  Score=182.30  Aligned_cols=213  Identities=24%  Similarity=0.268  Sum_probs=158.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+..|.+.||+|++++|++......+.           ..+       ...+.+..... .++|+|||+|
T Consensus         4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v-------~~~~~~~~~~~-~~~DavINLA   64 (297)
T COG1090           4 TGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNV-------TLWEGLADALT-LGIDAVINLA   64 (297)
T ss_pred             eccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------ccc-------cccchhhhccc-CCCCEEEECC
Confidence            7999999999999999999999999999988543322           111       12233444443 1699999999


Q ss_pred             CCCh------------------hhhHHHHHh---CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHH
Q 025702           81 GREA------------------DEVEPILDA---LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESV  138 (249)
Q Consensus        81 ~~~~------------------~~~~~~~~a---~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~  138 (249)
                      |...                  +.++.+.++   ++ +.+.+|..|..+.||.+....++|+++....--.+.-..-|+.
T Consensus        65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~  144 (297)
T COG1090          65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEE  144 (297)
T ss_pred             CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHH
Confidence            9743                  235556665   33 6677888888999999999999999543322222333444554


Q ss_pred             H---hhcCCcEEEeecceeeCCCCCcchHHHHHHHH--HcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceE
Q 025702          139 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL--KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (249)
Q Consensus       139 ~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (249)
                      .   +..+.+++.+|.|.|.++.  +.++..+....  .-|.++   |+|+++++|||++|+++++.+++++... .+.|
T Consensus       145 a~~a~~~gtRvvllRtGvVLs~~--GGaL~~m~~~fk~glGG~~---GsGrQ~~SWIhieD~v~~I~fll~~~~l-sGp~  218 (297)
T COG1090         145 ALQAQQLGTRVVLLRTGVVLSPD--GGALGKMLPLFKLGLGGKL---GSGRQWFSWIHIEDLVNAILFLLENEQL-SGPF  218 (297)
T ss_pred             HhhhhhcCceEEEEEEEEEecCC--CcchhhhcchhhhccCCcc---CCCCceeeeeeHHHHHHHHHHHHhCcCC-CCcc
Confidence            3   3468899999999999974  33444443333  334444   9999999999999999999999999875 4599


Q ss_pred             EecCCccccHHHHHHHHHHHhCCCc
Q 025702          214 NISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       214 ~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      |++.+.+++..++.+++.+.+++|.
T Consensus       219 N~taP~PV~~~~F~~al~r~l~RP~  243 (297)
T COG1090         219 NLTAPNPVRNKEFAHALGRALHRPA  243 (297)
T ss_pred             cccCCCcCcHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999654

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.96  E-value=8.4e-28  Score=191.77  Aligned_cols=215  Identities=25%  Similarity=0.267  Sum_probs=155.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||+++++.|+++|++|++++|++........           ..    ..++.+ +.+...+.  ++|+|||++
T Consensus         4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~----~~~~~~-~~~~~~~~--~~D~Vvh~a   65 (292)
T TIGR01777         4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EG----YKPWAP-LAESEALE--GADAVINLA   65 (292)
T ss_pred             EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------ee----eecccc-cchhhhcC--CCCEEEECC
Confidence            7999999999999999999999999998766321110           01    112222 33445555  899999999


Q ss_pred             CCC------------------hhhhHHHHHhCC--CC--CeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHH
Q 025702           81 GRE------------------ADEVEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        81 ~~~------------------~~~~~~~~~a~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (249)
                      +..                  ...+.+++++++  ++  .+||+.||..+||.....++.|+.+..+.+++ ..+...|.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~  145 (292)
T TIGR01777        66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEE  145 (292)
T ss_pred             CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHH
Confidence            742                  234778888876  44  35777777788997666677788755555555 44444555


Q ss_pred             HH---hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEE
Q 025702          138 VL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN  214 (249)
Q Consensus       138 ~~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  214 (249)
                      .+   ++.+++++++||+.+|||..  +....+........... .++++..++++|++|+|+++..+++++.. .++||
T Consensus       146 ~~~~~~~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~-~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~  221 (292)
T TIGR01777       146 AAQAAEDLGTRVVLLRTGIVLGPKG--GALAKMLPPFRLGLGGP-LGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN  221 (292)
T ss_pred             HhhhchhcCCceEEEeeeeEECCCc--chhHHHHHHHhcCcccc-cCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence            43   34579999999999999963  23333333222211111 36778889999999999999999988654 46999


Q ss_pred             ecCCccccHHHHHHHHHHHhCCC
Q 025702          215 ISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       215 i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      +++++.+|+.|+++.+++.+|.+
T Consensus       222 ~~~~~~~s~~di~~~i~~~~g~~  244 (292)
T TIGR01777       222 ATAPEPVRNKEFAKALARALHRP  244 (292)
T ss_pred             ecCCCccCHHHHHHHHHHHhCCC
Confidence            99999999999999999999964

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9e-28  Score=211.42  Aligned_cols=228  Identities=19%  Similarity=0.228  Sum_probs=167.1

Q ss_pred             CCCcccchHHHHHHHH--HcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCH------HHHHHhhhhC
Q 025702            1 MGGTRFIGVFLSRLLV--KEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY------DFVKSSLSAK   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~------~~l~~~~~~~   71 (249)
                      ||||||||++|+++|+  +.|++|++++|++....  +.    ...... ..+++++.+|+.|+      +.++++ +  
T Consensus         6 TGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~--~~----~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~--   76 (657)
T PRK07201          6 TGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR--LE----ALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G--   76 (657)
T ss_pred             eCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH--HH----HHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c--
Confidence            7999999999999999  47899999999653311  00    000000 15789999999983      455554 5  


Q ss_pred             CCcEEEecCCC-------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCC---CCCCCcc-cch
Q 025702           72 GFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT---VDPKSRH-KGK  132 (249)
Q Consensus        72 ~~d~Vi~~~~~-------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~---~~~~~~~-~~k  132 (249)
                      ++|+|||+++.             ++.++.+++++++  ++++|||+||..+||.... ++.|+..   ..+.+.| .+|
T Consensus        77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~sK  155 (657)
T PRK07201         77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRTK  155 (657)
T ss_pred             CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHHH
Confidence            99999999874             3456888999977  6899999999999986432 2334331   2233446 999


Q ss_pred             HHHHHHHh-hcCCcEEEeecceeeCCCCCcc--------hHHHHHHHHHc-CCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          133 LNTESVLE-SKGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKA-GRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       133 ~~~e~~~~-~~~~~~~~~r~~~v~g~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      ..+|.+++ ..+++++++||+++||+...+.        .+..++..+.. ...++..+.+....+++|++|+++++..+
T Consensus       156 ~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~  235 (657)
T PRK07201        156 FEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHL  235 (657)
T ss_pred             HHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHH
Confidence            99999987 4689999999999999854221        11122222211 11233445555678999999999999999


Q ss_pred             hcCCCCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      +..+...+++||+++++.+++.|+++.+.+.+|.+.
T Consensus       236 ~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        236 MHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             hcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            887666688999999999999999999999999765

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=5.1e-28  Score=204.04  Aligned_cols=234  Identities=13%  Similarity=0.133  Sum_probs=169.1

Q ss_pred             CCCcccchHHHHHHHHHcC---CeEEEEecCCCccccCCC-------CCCchhh---------hhccCceEEEEeccC--
Q 025702            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLP-------GESDQEF---------AEFSSKILHLKGDRK--   59 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~-------~~~~~~~---------~~~~~~v~~~~~d~~--   59 (249)
                      ||||||+|++|+..|++.+   .+|+++.|..........       ......+         .....+++++.+|++  
T Consensus        17 TGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~   96 (491)
T PLN02996         17 TGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYD   96 (491)
T ss_pred             eCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCc
Confidence            7999999999999999864   478999997764221100       0000000         001268999999998  


Q ss_pred             -----CHHHHHHhhhhCCCcEEEecCCC-------------ChhhhHHHHHhCC---CCCeEEEeeccccccCCCC----
Q 025702           60 -----DYDFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----  114 (249)
Q Consensus        60 -----d~~~l~~~~~~~~~d~Vi~~~~~-------------~~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~----  114 (249)
                           |.+.+.++++  ++|+|||+|+.             |+.++.+++++++   ++++|||+||..+||....    
T Consensus        97 ~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E  174 (491)
T PLN02996         97 DLGVKDSNLREEMWK--EIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILE  174 (491)
T ss_pred             CCCCChHHHHHHHHh--CCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeee
Confidence                 4555677777  89999999975             3456888898875   5789999999999986431    


Q ss_pred             CCCCCCC-----------------------------------------------CCCCCCcc-cchHHHHHHHhh--cCC
Q 025702          115 LPHCETD-----------------------------------------------TVDPKSRH-KGKLNTESVLES--KGV  144 (249)
Q Consensus       115 ~~~~e~~-----------------------------------------------~~~~~~~~-~~k~~~e~~~~~--~~~  144 (249)
                      .++.+..                                               ...+.+.| .+|..+|.++++  .++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~l  254 (491)
T PLN02996        175 KPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENL  254 (491)
T ss_pred             ecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCC
Confidence            1121100                                               01122346 999999999865  479


Q ss_pred             cEEEeecceeeCCCCCc--ch------HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC---CCCCceE
Q 025702          145 NWTSLRPVYIYGPLNYN--PV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVF  213 (249)
Q Consensus       145 ~~~~~r~~~v~g~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~  213 (249)
                      +++++||++|||+....  .+      ...++.....+....+++++.+.++++|++|++++++.++...   ...+++|
T Consensus       255 pv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vY  334 (491)
T PLN02996        255 PLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIY  334 (491)
T ss_pred             CEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEE
Confidence            99999999999986421  11      2334444556666667789999999999999999999998752   1235799


Q ss_pred             EecCC--ccccHHHHHHHHHHHhCC
Q 025702          214 NISGE--KYVTFDGLARACAKVTGY  236 (249)
Q Consensus       214 ~i~~~--~~~s~~~l~~~~~~~~g~  236 (249)
                      |++++  .++|+.++++.+.+.++.
T Consensus       335 Ni~s~~~~~~s~~ei~~~~~~~~~~  359 (491)
T PLN02996        335 HVGSSLKNPVKFSNLHDFAYRYFSK  359 (491)
T ss_pred             EecCCCCCcccHHHHHHHHHHHhhh
Confidence            99998  889999999999999874

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=1.3e-27  Score=189.49  Aligned_cols=230  Identities=21%  Similarity=0.302  Sum_probs=180.5

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||+|+||+++|++.+  .++++++..+....  +..+   ........++++.+|+.|...+...++  ++ .|+|
T Consensus        10 tGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~--~~~e---~~~~~~~~v~~~~~D~~~~~~i~~a~~--~~-~Vvh   81 (361)
T KOG1430|consen   10 TGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN--LPAE---LTGFRSGRVTVILGDLLDANSISNAFQ--GA-VVVH   81 (361)
T ss_pred             ECCccHHHHHHHHHHHhcccccEEEEeccCccccc--cchh---hhcccCCceeEEecchhhhhhhhhhcc--Cc-eEEE
Confidence            7999999999999999998  89999998876421  1100   000014689999999999999999998  88 7777


Q ss_pred             cCCC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCC-CCCCC--CCCCCcc-cchHHHH
Q 025702           79 INGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPH-CETDT--VDPKSRH-KGKLNTE  136 (249)
Q Consensus        79 ~~~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~-~e~~~--~~~~~~~-~~k~~~e  136 (249)
                      +++.                |++++++++++|.  +++++||+||..|......... +|+.+  .+..++| .+|..+|
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE  161 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE  161 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence            6553                5678999999988  8999999999999765444222 23332  2333467 9999999


Q ss_pred             HHHhhcC----CcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc-----CCC
Q 025702          137 SVLESKG----VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG-----NEK  207 (249)
Q Consensus       137 ~~~~~~~----~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~-----~~~  207 (249)
                      +++++.+    +..+.+||+.||||++ ....+.+...+..+..+...+++....++++++.++.+.+.+..     .+.
T Consensus       162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd-~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~  240 (361)
T KOG1430|consen  162 KLVLEANGSDDLYTCALRPPGIYGPGD-KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPS  240 (361)
T ss_pred             HHHHHhcCCCCeeEEEEccccccCCCC-ccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCc
Confidence            9986543    7899999999999975 44566777788888887777888888999999988888776653     344


Q ss_pred             CCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          208 ASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       208 ~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      ..|+.|+|++++++...+++..+.+.+|.+.+
T Consensus       241 ~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~  272 (361)
T KOG1430|consen  241 VNGQFYFITDDTPVRFFDFLSPLVKALGYCLP  272 (361)
T ss_pred             cCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence            57999999999999999999999999998766

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=1.2e-27  Score=195.68  Aligned_cols=225  Identities=18%  Similarity=0.247  Sum_probs=158.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++++++|+++|++|++++|+.........     .+.. ..+++++.+|+.|.+.+.++++  ++|+|||+|
T Consensus        16 tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A   87 (353)
T PLN02896         16 TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS-----KWKE-GDRLRLFRADLQEEGSFDEAVK--GCDGVFHVA   87 (353)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----hhcc-CCeEEEEECCCCCHHHHHHHHc--CCCEEEECC
Confidence            7999999999999999999999999987644211000     0000 2468899999999999999998  899999998


Q ss_pred             CCCh-----------------------hhhHHHHHhCC---CCCeEEEeeccccccCCCC-----CCCCCCCC--C----
Q 025702           81 GREA-----------------------DEVEPILDALP---NLEQFIYCSSAGVYLKSDL-----LPHCETDT--V----  123 (249)
Q Consensus        81 ~~~~-----------------------~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~-----~~~~e~~~--~----  123 (249)
                      +...                       .++.++++++.   ++++||++||..+||....     .+++|+..  .    
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            7520                       24567788865   3789999999999984321     24455421  1    


Q ss_pred             ---CCCCcc-cchHHHHHHH----hhcCCcEEEeecceeeCCCCCcc---hHHHHHHHHHcCCC--eeecCCC---cceE
Q 025702          124 ---DPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRP--IPIPGSG---IQVT  187 (249)
Q Consensus       124 ---~~~~~~-~~k~~~e~~~----~~~~~~~~~~r~~~v~g~~~~~~---~~~~~~~~~~~~~~--~~~~~~~---~~~~  187 (249)
                         .+...| .+|..+|.++    +..+++++++||+++|||+....   .+..+...+ .+..  ....+..   ...+
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPI-TGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHh-cCCccccccccccccccCce
Confidence               133356 9999999876    34689999999999999975432   222222211 2222  1111111   1236


Q ss_pred             eeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCC
Q 025702          188 QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      +|+|++|+|++++.+++.+.. ++.|++ ++..+++.|+++++.+.++.
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKA-EGRYIC-CVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCc-CccEEe-cCCCCCHHHHHHHHHHhCCC
Confidence            999999999999999987543 346754 56789999999999999973

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.95  E-value=2.9e-26  Score=185.12  Aligned_cols=208  Identities=18%  Similarity=0.245  Sum_probs=160.5

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++++++|+++|  ++|++++|+...... +.    ...  ...+++++.+|++|.+.+.++++  ++|+|||
T Consensus        10 TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~-~~----~~~--~~~~~~~v~~Dl~d~~~l~~~~~--~iD~Vih   80 (324)
T TIGR03589        10 TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE-MQ----QKF--PAPCLRFFIGDVRDKERLTRALR--GVDYVVH   80 (324)
T ss_pred             eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH-HH----HHh--CCCcEEEEEccCCCHHHHHHHHh--cCCEEEE
Confidence            7999999999999999986  789999987543210 00    000  02468899999999999999998  8999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      +++..                ..++.++++++.  ++++||++||...              ..|.+.| .+|..+|.++
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p~~~Y~~sK~~~E~l~  146 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPINLYGATKLASDKLF  146 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCCCCHHHHHHHHHHHHH
Confidence            98852                225778888876  6789999998542              2344557 9999999876


Q ss_pred             h-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCC-CeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCc
Q 025702          140 E-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (249)
Q Consensus       140 ~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (249)
                      +       ..+++++++||+++|||+.  .+++.+......+. ++++ +++.+.++|+|++|++++++.++++.. .++
T Consensus       147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~-~~~  222 (324)
T TIGR03589       147 VAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML-GGE  222 (324)
T ss_pred             HHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC-CCC
Confidence            3       3579999999999999963  45666666666665 4555 356778999999999999999998753 356


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCC
Q 025702          212 VFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      +| +.++..+++.|+++.+.+.+..
T Consensus       223 ~~-~~~~~~~sv~el~~~i~~~~~~  246 (324)
T TIGR03589       223 IF-VPKIPSMKITDLAEAMAPECPH  246 (324)
T ss_pred             EE-ccCCCcEEHHHHHHHHHhhCCe
Confidence            77 5666779999999999997653

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.95  E-value=6.7e-27  Score=185.92  Aligned_cols=202  Identities=21%  Similarity=0.272  Sum_probs=155.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----CC-CcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KG-FDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~~-~d~   75 (249)
                      |||||++|++++++|++.|++|++++|++++..              ..+++.+.+|+.|.+.+..+++.    .+ +|.
T Consensus         5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------CCCCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            699999999999999999999999999987521              14677788999999999998831    26 999


Q ss_pred             EEecCCCC---hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhc-CCcEEEe
Q 025702           76 VYDINGRE---ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESK-GVNWTSL  149 (249)
Q Consensus        76 Vi~~~~~~---~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~-~~~~~~~  149 (249)
                      |+|+++..   .....+++++++  +++|||++||..++..             .    ..+...|+++++. +++++++
T Consensus        71 v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-------------~----~~~~~~~~~l~~~~gi~~til  133 (285)
T TIGR03649        71 VYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKG-------------G----PAMGQVHAHLDSLGGVEYTVL  133 (285)
T ss_pred             EEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCC-------------C----chHHHHHHHHHhccCCCEEEE
Confidence            99998743   345778899876  8999999998665211             0    1234567788775 9999999


Q ss_pred             ecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHH
Q 025702          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (249)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~  229 (249)
                      ||+++++... ..   .....+.+...+. .+.++..+++++++|+|++++.++.++...++.|++++++.+|+.|+++.
T Consensus       134 Rp~~f~~~~~-~~---~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~  208 (285)
T TIGR03649       134 RPTWFMENFS-EE---FHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEI  208 (285)
T ss_pred             eccHHhhhhc-cc---ccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHH
Confidence            9998886531 11   1112223333333 34466778999999999999999998766678999999999999999999


Q ss_pred             HHHHhCCCc
Q 025702          230 CAKVTGYCI  238 (249)
Q Consensus       230 ~~~~~g~~~  238 (249)
                      +.+.+|.+.
T Consensus       209 l~~~~g~~v  217 (285)
T TIGR03649       209 LSRVLGRKI  217 (285)
T ss_pred             HHHHhCCce
Confidence            999999753

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.95  E-value=5.9e-26  Score=186.64  Aligned_cols=234  Identities=19%  Similarity=0.230  Sum_probs=162.0

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCcccc--CCCCCCchh-h--hhcc-CceEEEEeccCCH------HHHHH
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQ--QLPGESDQE-F--AEFS-SKILHLKGDRKDY------DFVKS   66 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~--~~~~~~~~~-~--~~~~-~~v~~~~~d~~d~------~~l~~   66 (249)
                      ||||||+|++++++|+++|  ++|++++|+......  .+....+.. +  .... .+++++.+|++++      +.+..
T Consensus         5 tGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~   84 (367)
T TIGR01746         5 TGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWER   84 (367)
T ss_pred             eccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHH
Confidence            7999999999999999998  679999998763210  000000000 0  0001 5799999998753      45666


Q ss_pred             hhhhCCCcEEEecCCC-------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCC-----CCC
Q 025702           67 SLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-----DPK  126 (249)
Q Consensus        67 ~~~~~~~d~Vi~~~~~-------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-----~~~  126 (249)
                      +.+  ++|+|||+++.             ++.++.++++++.  +.++|+++||.++|+.....+..++.+.     .+.
T Consensus        85 ~~~--~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~  162 (367)
T TIGR01746        85 LAE--NVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLA  162 (367)
T ss_pred             HHh--hCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccC
Confidence            665  89999999874             3456788888876  6778999999999976433222333221     123


Q ss_pred             Ccc-cchHHHHHHHhh---cCCcEEEeecceeeCCCCCc-----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          127 SRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~~---~~~~~~~~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ..| .+|..+|.+++.   .+++++++||+.++|+...+     .++..++........++  .......++++++|+++
T Consensus       163 ~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~vddva~  240 (367)
T TIGR01746       163 GGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYP--DSPELTEDLTPVDYVAR  240 (367)
T ss_pred             CChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCC--CCCccccCcccHHHHHH
Confidence            346 999999998754   48999999999999974221     23333333333322221  22223578999999999


Q ss_pred             HHHHHhcCCCC--CCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          198 AFVQVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      +++.++.++..  .+++||+++++++++.|+++.+.+ +|.+..
T Consensus       241 ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~  283 (367)
T TIGR01746       241 AIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK  283 (367)
T ss_pred             HHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC
Confidence            99999887653  278999999999999999999999 886644

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK05865 hypothetical protein; Provisional

Probab=99.95  E-value=5.6e-26  Score=199.12  Aligned_cols=188  Identities=24%  Similarity=0.345  Sum_probs=152.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||+|++++++|+++|++|++++|+....   .           ..+++++.+|+.|.+.+.++++  ++|+|||++
T Consensus         6 TGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----------~~~v~~v~gDL~D~~~l~~al~--~vD~VVHlA   69 (854)
T PRK05865          6 TGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----------PSSADFIAADIRDATAVESAMT--GADVVAHCA   69 (854)
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----------ccCceEEEeeCCCHHHHHHHHh--CCCEEEECC
Confidence            79999999999999999999999999975331   1           1368889999999999999998  899999999


Q ss_pred             CCC-------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEeec
Q 025702           81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (249)
Q Consensus        81 ~~~-------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r~  151 (249)
                      +..       ..++.+++++|+  ++++||++||..                        |..+|+++++++++++++||
T Consensus        70 a~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------K~aaE~ll~~~gl~~vILRp  125 (854)
T PRK05865         70 WVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------QPRVEQMLADCGLEWVAVRC  125 (854)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------HHHHHHHHHHcCCCEEEEEe
Confidence            752       456888999987  778999999843                        78899999888999999999


Q ss_pred             ceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHH
Q 025702          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (249)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~  231 (249)
                      +++|||+.     ..++..+.. .++...+++...++|+|++|+++++..+++.+...+++||+++++.+|+.|+++.+.
T Consensus       126 ~~VYGP~~-----~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~  199 (854)
T PRK05865        126 ALIFGRNV-----DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALG  199 (854)
T ss_pred             ceEeCCCh-----HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHh
Confidence            99999962     222322222 223333455567899999999999999987654456799999999999999999998


Q ss_pred             HHh
Q 025702          232 KVT  234 (249)
Q Consensus       232 ~~~  234 (249)
                      +..
T Consensus       200 ~~~  202 (854)
T PRK05865        200 RPM  202 (854)
T ss_pred             hhh
Confidence            753

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.95  E-value=4.9e-27  Score=181.24  Aligned_cols=213  Identities=19%  Similarity=0.298  Sum_probs=158.5

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhh--ccCce----EEEEeccCCHHHHHHhhhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKI----LHLKGDRKDYDFVKSSLSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v----~~~~~d~~d~~~l~~~~~~~~~   73 (249)
                      |||+|+||+.|+++|++.+ .++++++|++.......     .++..  ..+++    ..+.+|+.|.+.+.++++..+|
T Consensus         4 TGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~-----~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p   78 (293)
T PF02719_consen    4 TGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELE-----RELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP   78 (293)
T ss_dssp             ETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHH-----HHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred             EccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHH-----HHHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence            7999999999999999987 68999999987632110     01100  01234    3458999999999999999999


Q ss_pred             cEEEecCCC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHH
Q 025702           74 DVVYDINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (249)
Q Consensus        74 d~Vi~~~~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (249)
                      |+|||.|+.                |+.++.++++++.  ++++||++||..+              .+|.+.+ .+|+.
T Consensus        79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~PtnvmGatKrl  144 (293)
T PF02719_consen   79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPTNVMGATKRL  144 (293)
T ss_dssp             SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS--SHHHHHHHH
T ss_pred             CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCCcHHHHHHHH
Confidence            999999997                3557999999976  8999999999775              4678888 99999


Q ss_pred             HHHHHhh-------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC
Q 025702          135 TESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       135 ~e~~~~~-------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (249)
                      +|.++..       .+.+++++|+|+|+|.  .++.++.|..++.+++++++ .+++..|-|+.+++.++.++.+.....
T Consensus       145 aE~l~~~~~~~~~~~~t~f~~VRFGNVlgS--~GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~  221 (293)
T PF02719_consen  145 AEKLVQAANQYSGNSDTKFSSVRFGNVLGS--RGSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAK  221 (293)
T ss_dssp             HHHHHHHHCCTSSSS--EEEEEEE-EETTG--TTSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHhhhCCCCCcEEEEEEecceecC--CCcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCC
Confidence            9999843       2358999999999997  47899999999999999988 456778999999999999999998765


Q ss_pred             CCCceEEecCCccccHHHHHHHHHHHhCC
Q 025702          208 ASRQVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       208 ~~~~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                       .|++|.+.-|++++..|+++.+.+..|.
T Consensus       222 -~geifvl~mg~~v~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  222 -GGEIFVLDMGEPVKILDLAEAMIELSGL  249 (293)
T ss_dssp             -TTEEEEE---TCEECCCHHHHHHHHTT-
T ss_pred             -CCcEEEecCCCCcCHHHHHHHHHhhccc
Confidence             4789999889999999999999999984

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=7.5e-26  Score=180.68  Aligned_cols=218  Identities=16%  Similarity=0.180  Sum_probs=155.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcccc--CCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++++++|+++||+|++++|+......  .+.     .+.....+++++.+|++|.+.+.+++.  ++|.|+|
T Consensus        12 TGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~~   84 (297)
T PLN02583         12 MDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIR-----GLSCEEERLKVFDVDPLDYHSILDALK--GCSGLFC   84 (297)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHH-----hcccCCCceEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            7999999999999999999999999996432110  000     000002468899999999999999998  9999999


Q ss_pred             cCCC--------------ChhhhHHHHHhCC---CCCeEEEeecccccc--CC---CCCCCCCCCCCCCC------Ccc-
Q 025702           79 INGR--------------EADEVEPILDALP---NLEQFIYCSSAGVYL--KS---DLLPHCETDTVDPK------SRH-  129 (249)
Q Consensus        79 ~~~~--------------~~~~~~~~~~a~~---~~~~~i~~Ss~~v~~--~~---~~~~~~e~~~~~~~------~~~-  129 (249)
                      +++.              +..++.++++++.   +++|+|++||..++.  ..   ...+++|+....+.      ..| 
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            7542              2346888999865   468999999987653  11   12345555332211      146 


Q ss_pred             cchHHHHHHH----hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          130 KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       130 ~~k~~~e~~~----~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      .+|..+|+++    +..+++++++||+++|||+..... .     ...+.. ....+  ..++++|++|+|++++.+++.
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~-~-----~~~~~~-~~~~~--~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN-P-----YLKGAA-QMYEN--GVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch-h-----hhcCCc-ccCcc--cCcceEEHHHHHHHHHHHhcC
Confidence            8999999987    346899999999999999753221 1     112221 11122  246799999999999999998


Q ss_pred             CCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          206 EKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +.. ++.|.++++....+.++++++.+.+.
T Consensus       236 ~~~-~~r~~~~~~~~~~~~~~~~~~~~~~p  264 (297)
T PLN02583        236 VSS-YGRYLCFNHIVNTEEDAVKLAQMLSP  264 (297)
T ss_pred             ccc-CCcEEEecCCCccHHHHHHHHHHhCC
Confidence            765 44788888666667889999999875

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.93  E-value=1.9e-24  Score=177.34  Aligned_cols=212  Identities=21%  Similarity=0.307  Sum_probs=180.1

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      |||+|.+|+.+++++++.+ -+++.++|++.+... .    +.++..  ....+.++.+|+.|.+.+..+++..++|+||
T Consensus       256 TGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~-i----~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf  330 (588)
T COG1086         256 TGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYL-I----DMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF  330 (588)
T ss_pred             eCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHH-H----HHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence            7999999999999999987 578888888766311 0    011111  1357889999999999999999977899999


Q ss_pred             ecCCC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHH
Q 025702           78 DINGR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (249)
Q Consensus        78 ~~~~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (249)
                      |.|+.                |+-+++|+++||.  ++++||++||..+              .+|.+-+ .+|+.+|+.
T Consensus       331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA--------------V~PtNvmGaTKr~aE~~  396 (588)
T COG1086         331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA--------------VNPTNVMGATKRLAEKL  396 (588)
T ss_pred             EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc--------------cCCchHhhHHHHHHHHH
Confidence            99986                4558999999976  8999999998664              5788887 999999998


Q ss_pred             Hhhc-------CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCc
Q 025702          139 LESK-------GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (249)
Q Consensus       139 ~~~~-------~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (249)
                      +...       +.+++.+|+|+|.|.  .++.+|-|..++.+|+++++ .+++..+-|+.+.|.++.++++..... .|+
T Consensus       397 ~~a~~~~~~~~~T~f~~VRFGNVlGS--rGSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~~-gGe  472 (588)
T COG1086         397 FQAANRNVSGTGTRFCVVRFGNVLGS--RGSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIAK-GGE  472 (588)
T ss_pred             HHHHhhccCCCCcEEEEEEecceecC--CCCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhcC-CCc
Confidence            7432       368999999999997  47899999999999999887 567888999999999999999998865 588


Q ss_pred             eEEecCCccccHHHHHHHHHHHhC
Q 025702          212 VFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +|.+.-|++++..|+++.+.+..|
T Consensus       473 ifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         473 IFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             EEEEcCCCCeEHHHHHHHHHHHhC
Confidence            999999999999999999999998

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=1.6e-24  Score=172.71  Aligned_cols=196  Identities=15%  Similarity=0.145  Sum_probs=147.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||+|++|+++|+++|++|+...                             .|+.|.+.+...++..++|+|||+|
T Consensus        15 tG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------------~~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778         15 YGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------------GRLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEec-----------------------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence            79999999999999999999987431                             1334556677777766899999999


Q ss_pred             CCC-------------------hhhhHHHHHhCC--CCCeEEEeeccccccCCC------CCCCCCCCCCC-CCCcc-cc
Q 025702           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD------LLPHCETDTVD-PKSRH-KG  131 (249)
Q Consensus        81 ~~~-------------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~------~~~~~e~~~~~-~~~~~-~~  131 (249)
                      +..                   ..++.+++++|+  ++ +++++||..+|+...      ..++.|++++. |.+.| .+
T Consensus        66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~s  144 (298)
T PLN02778         66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKT  144 (298)
T ss_pred             cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHH
Confidence            752                   124778999987  56 467778888886432      22466666554 44677 99


Q ss_pred             hHHHHHHHhhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCc
Q 025702          132 KLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (249)
Q Consensus       132 k~~~e~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (249)
                      |..+|.+++... +..++|++..+|++..  ....++..+..+..+...+     .+++|++|++++++.++....  ++
T Consensus       145 K~~~E~~~~~y~-~~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~--~g  214 (298)
T PLN02778        145 KAMVEELLKNYE-NVCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL--TG  214 (298)
T ss_pred             HHHHHHHHHHhh-ccEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC--CC
Confidence            999999987653 6788999888886422  1233566777766544332     269999999999999997654  36


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCC
Q 025702          212 VFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      +||+++++.+|+.|+++.+++.+|.
T Consensus       215 ~yNigs~~~iS~~el~~~i~~~~~~  239 (298)
T PLN02778        215 IYNFTNPGVVSHNEILEMYRDYIDP  239 (298)
T ss_pred             eEEeCCCCcccHHHHHHHHHHHhCC
Confidence            9999999999999999999999994

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.93  E-value=1.2e-24  Score=163.60  Aligned_cols=212  Identities=24%  Similarity=0.315  Sum_probs=175.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|||||+|+.++++|.+.|-+|++--|........+.-      ..-...+-+...|+.|+++++++.+  ...+|||+.
T Consensus        67 FGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkv------mGdLGQvl~~~fd~~DedSIr~vvk--~sNVVINLI  138 (391)
T KOG2865|consen   67 FGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKV------MGDLGQVLFMKFDLRDEDSIRAVVK--HSNVVINLI  138 (391)
T ss_pred             ecccccccHHHHHHHhhcCCeEEEeccCCccchhheee------cccccceeeeccCCCCHHHHHHHHH--hCcEEEEee
Confidence            69999999999999999999999999987664322211      0113578889999999999999999  999999999


Q ss_pred             CCC------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhcCCc
Q 025702           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVN  145 (249)
Q Consensus        81 ~~~------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~  145 (249)
                      |..            ....+++...|+  ++.|||++|+.++             .....+.+ .+|...|+.+++.-..
T Consensus       139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-------------nv~s~Sr~LrsK~~gE~aVrdafPe  205 (391)
T KOG2865|consen  139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-------------NVKSPSRMLRSKAAGEEAVRDAFPE  205 (391)
T ss_pred             ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc-------------cccChHHHHHhhhhhHHHHHhhCCc
Confidence            863            345777887888  8999999998663             13444455 9999999999998889


Q ss_pred             EEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCc-ceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHH
Q 025702          146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI-QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (249)
Q Consensus       146 ~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (249)
                      .+|+||+.|||..  .+++..+....++-..+++++.|. ..-.++++-|+|.+|+.+++++...|.+|..+++...+..
T Consensus       206 AtIirPa~iyG~e--Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~  283 (391)
T KOG2865|consen  206 ATIIRPADIYGTE--DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLS  283 (391)
T ss_pred             ceeechhhhcccc--hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHH
Confidence            9999999999985  345666666666666788877664 4578999999999999999999889999999999999999


Q ss_pred             HHHHHHHHHhC
Q 025702          225 GLARACAKVTG  235 (249)
Q Consensus       225 ~l~~~~~~~~g  235 (249)
                      |+++++.+...
T Consensus       284 eLvd~my~~~~  294 (391)
T KOG2865|consen  284 ELVDIMYDMAR  294 (391)
T ss_pred             HHHHHHHHHHh
Confidence            99999988775

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=5.7e-24  Score=159.93  Aligned_cols=234  Identities=20%  Similarity=0.163  Sum_probs=183.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||-||+-|++|++.|++.||+|+++.|..+......- .+..........+.++.+|++|...+.++++..+||-|+|++
T Consensus         8 TGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLa   86 (345)
T COG1089           8 TGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDEIYNLA   86 (345)
T ss_pred             ecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhcCchhheecc
Confidence            7999999999999999999999999998665322110 000001111345889999999999999999999999999998


Q ss_pred             CCC----------------hhhhHHHHHhCC--C--CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHH--
Q 025702           81 GRE----------------ADEVEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES--  137 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~--  137 (249)
                      +..                ..++.++++|++  +  ..||...||+..||.....|..|..|+.|.++| .+|..+--  
T Consensus        87 AQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~t  166 (345)
T COG1089          87 AQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWIT  166 (345)
T ss_pred             ccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHhee
Confidence            863                236899999987  2  469999999999999999999999999999999 88876553  


Q ss_pred             --HHhhcCCcEEEeecceeeCCCCCcch----HHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC
Q 025702          138 --VLESKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (249)
Q Consensus       138 --~~~~~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (249)
                        +-+.+++..+.=++.+-=+|.....+    +...+.++..|.. --..|+-+..+||-|..|.+++++.+++++.  .
T Consensus       167 vNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~--P  244 (345)
T COG1089         167 VNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE--P  244 (345)
T ss_pred             eehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC--C
Confidence              33567777776666555556433322    3344455555543 2234888899999999999999999999986  4


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          211 QVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       211 ~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      +.|++++|+..|++|++++..+..|+.
T Consensus       245 ddyViATg~t~sVrefv~~Af~~~g~~  271 (345)
T COG1089         245 DDYVIATGETHSVREFVELAFEMVGID  271 (345)
T ss_pred             CceEEecCceeeHHHHHHHHHHHcCce
Confidence            899999999999999999999999954

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.93  E-value=3.1e-25  Score=165.12  Aligned_cols=175  Identities=32%  Similarity=0.472  Sum_probs=136.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||||++|+.++++|+++|++|++++|++.+...             ..+++++.+|+.|.+.+.+.++  ++|+||+++
T Consensus         4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~   68 (183)
T PF13460_consen    4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALK--GADAVIHAA   68 (183)
T ss_dssp             ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhh--hcchhhhhh
Confidence            6999999999999999999999999999886432             2689999999999999999999  999999998


Q ss_pred             CC---ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEeecceee
Q 025702           81 GR---EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (249)
Q Consensus        81 ~~---~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r~~~v~  155 (249)
                      +.   .....++++++++  +++++|++|+.++|......... .....+..++..|..+|+.+++.+++|+++||+.+|
T Consensus        69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~  147 (183)
T PF13460_consen   69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSD-EDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIY  147 (183)
T ss_dssp             HSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEG-GTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEE
T ss_pred             hhhcccccccccccccccccccccceeeeccccCCCCCccccc-ccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeE
Confidence            74   3556788899887  88999999999998754332111 111112233478888999999999999999999999


Q ss_pred             CCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      |+.....             .+ ....+....++|+.+|+|++++.++++
T Consensus       148 ~~~~~~~-------------~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  148 GNPSRSY-------------RL-IKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             BTTSSSE-------------EE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             eCCCcce-------------eE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9853211             11 111334456999999999999999864

...

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=4.7e-24  Score=155.23  Aligned_cols=212  Identities=20%  Similarity=0.294  Sum_probs=167.3

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|.+|++|.+.+.++|.  +-.++..+.                         .+|+++.++.+++|+.++|.+|||
T Consensus         7 tGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-------------------------d~DLt~~a~t~~lF~~ekPthVIh   61 (315)
T KOG1431|consen    7 TGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-------------------------DADLTNLADTRALFESEKPTHVIH   61 (315)
T ss_pred             ecCCchHHHHHHHHHHhcCCCCcceEEeccc-------------------------cccccchHHHHHHHhccCCceeee
Confidence            69999999999999999886  444444332                         348999999999999999999999


Q ss_pred             cCCC-----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCC----CCCCCCc-c-cchH
Q 025702           79 INGR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKL  133 (249)
Q Consensus        79 ~~~~-----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~~~-~-~~k~  133 (249)
                      +|+.                 |.....|++..+.  ++++++++.|.++|.+....|++|..    |+.|.++ | -+|.
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            9874                 1223455666655  89999999999999998888988875    5566665 3 5564


Q ss_pred             HHH----HHHhhcCCcEEEeecceeeCCCC-----CcchHHHHHHHHH----cCC-CeeecCCCcceEeeeeHHHHHHHH
Q 025702          134 NTE----SVLESKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLK----AGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       134 ~~e----~~~~~~~~~~~~~r~~~v~g~~~-----~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .+.    .+..++|..++.+.|.++|||.+     .+..++.++++..    ++. .+..+|+|...++|+|.+|+|+++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~  221 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF  221 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence            443    34467899999999999999975     3456777766653    333 688899999999999999999999


Q ss_pred             HHHhcCCCCCCceEEecCCc--cccHHHHHHHHHHHhCCCc
Q 025702          200 VQVLGNEKASRQVFNISGEK--YVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~--~~s~~~l~~~~~~~~g~~~  238 (249)
                      ++++.+-.. -+-++++.++  .+|++|+++++.+++++..
T Consensus       222 i~vlr~Y~~-vEpiils~ge~~EVtI~e~aeaV~ea~~F~G  261 (315)
T KOG1431|consen  222 IWVLREYEG-VEPIILSVGESDEVTIREAAEAVVEAVDFTG  261 (315)
T ss_pred             HHHHHhhcC-ccceEeccCccceeEHHHHHHHHHHHhCCCc
Confidence            999987542 3456778777  7999999999999999753

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.92  E-value=1.2e-23  Score=164.27  Aligned_cols=207  Identities=17%  Similarity=0.136  Sum_probs=148.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhh-hhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSL-SAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~-~~~~~d~Vi~   78 (249)
                      |||||++|++++++|++.|++|++++|++.......+.         ..+++++.+|++| .+.+.+.+ .  ++|+||+
T Consensus        23 tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~l~~~~~~--~~d~vi~   91 (251)
T PLN00141         23 AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ---------DPSLQIVRADVTEGSDKLVEAIGD--DSDAVIC   91 (251)
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc---------CCceEEEEeeCCCCHHHHHHHhhc--CCCEEEE
Confidence            69999999999999999999999999987653222211         2468999999998 46666666 4  8999999


Q ss_pred             cCCCCh------------hhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCC-CCCCCcc-cchHHHHHHHhhc
Q 025702           79 INGREA------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT-VDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        79 ~~~~~~------------~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~-~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +++...            .+..++++++.  +.+++|++||..+|+.....+..+... .++...+ ..|..+|+++++.
T Consensus        92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~  171 (251)
T PLN00141         92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKS  171 (251)
T ss_pred             CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            987531            24688889876  788999999999997543322211111 1112222 5688889998888


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCc---
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK---  219 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~---  219 (249)
                      +++++++||++++++.....              +...........+++.+|+|+++..++..+...+.++.+.+..   
T Consensus       172 gi~~~iirpg~~~~~~~~~~--------------~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T PLN00141        172 GINYTIVRPGGLTNDPPTGN--------------IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP  237 (251)
T ss_pred             CCcEEEEECCCccCCCCCce--------------EEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence            99999999999998642111              1111111122357999999999999999877666778887632   


Q ss_pred             cccHHHHHHHHHH
Q 025702          220 YVTFDGLARACAK  232 (249)
Q Consensus       220 ~~s~~~l~~~~~~  232 (249)
                      ..++.+++..+++
T Consensus       238 ~~~~~~~~~~~~~  250 (251)
T PLN00141        238 KRSYKDLFASIKQ  250 (251)
T ss_pred             chhHHHHHHHhhc
Confidence            4788888887765

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.92  E-value=7.6e-25  Score=169.12  Aligned_cols=211  Identities=22%  Similarity=0.345  Sum_probs=156.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      +||||.+|+++++.|++.+++|++++|++.+.. ..+.          ..+++++.+|+.|.+++.++|+  ++|.||++
T Consensus         4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----------~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----------ALGAEVVEADYDDPESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----------HTTTEEEES-TT-HHHHHHHHT--TCSEEEEE
T ss_pred             ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----------cccceEeecccCCHHHHHHHHc--CCceEEee
Confidence            699999999999999999999999999985421 1111          3578999999999999999999  99999998


Q ss_pred             CCCC----hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC-cccchHHHHHHHhhcCCcEEEeecc
Q 025702           80 NGRE----ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPV  152 (249)
Q Consensus        80 ~~~~----~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~-~~~~k~~~e~~~~~~~~~~~~~r~~  152 (249)
                      .+..    .....++++|+.  ++++||+.|....+.        +.....|.. .+..|...|+++++.+++++++|++
T Consensus        72 ~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g  143 (233)
T PF05368_consen   72 TPPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPG  143 (233)
T ss_dssp             SSCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-
T ss_pred             cCcchhhhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhhhhhccccceecccc
Confidence            7743    557888999987  999999877555431        111222322 3378899999999999999999999


Q ss_pred             eeeCCCCCcchHHHHHH--HHHcCC-CeeecCCCcceEeee-eHHHHHHHHHHHhcCCCCC--CceEEecCCccccHHHH
Q 025702          153 YIYGPLNYNPVEEWFFH--RLKAGR-PIPIPGSGIQVTQLG-HVKDLARAFVQVLGNEKAS--RQVFNISGEKYVTFDGL  226 (249)
Q Consensus       153 ~v~g~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~i-~~~D~a~~~~~~~~~~~~~--~~~~~i~~~~~~s~~~l  226 (249)
                      .++..     +...+..  ...... .+.++++++....++ +.+|++++++.++.++...  ++.+.+++ +.+|+.|+
T Consensus       144 ~f~e~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~ei  217 (233)
T PF05368_consen  144 FFMEN-----LLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEI  217 (233)
T ss_dssp             EEHHH-----HHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHH
T ss_pred             chhhh-----hhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHH
Confidence            86543     1111111  111222 356667777666665 9999999999999997654  56677765 88999999


Q ss_pred             HHHHHHHhCCC
Q 025702          227 ARACAKVTGYC  237 (249)
Q Consensus       227 ~~~~~~~~g~~  237 (249)
                      ++.+.+.+|.+
T Consensus       218 a~~~s~~~G~~  228 (233)
T PF05368_consen  218 AAILSKVLGKK  228 (233)
T ss_dssp             HHHHHHHHTSE
T ss_pred             HHHHHHHHCCc
Confidence            99999999965

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12320 hypothetical protein; Provisional

Probab=99.91  E-value=3.6e-23  Score=178.18  Aligned_cols=184  Identities=14%  Similarity=0.129  Sum_probs=141.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||+|++|++.|+++|++|++++|.+...    .          ..+++++.+|+.|.. +.+++.  ++|+|||++
T Consensus         6 TGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----~----------~~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLA   68 (699)
T PRK12320          6 TDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----L----------DPRVDYVCASLRNPV-LQELAG--EADAVIHLA   68 (699)
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----c----------cCCceEEEccCCCHH-HHHHhc--CCCEEEEcC
Confidence            79999999999999999999999999875431    1          247889999999985 777777  899999999


Q ss_pred             CCC--------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEee
Q 025702           81 GRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (249)
Q Consensus        81 ~~~--------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r  150 (249)
                      +..        ..++.+++++|+  ++ ++||+||.  +|...             . |   ..+|.++...+++++++|
T Consensus        69 a~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~-------------~-~---~~aE~ll~~~~~p~~ILR  128 (699)
T PRK12320         69 PVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE-------------L-Y---RQAETLVSTGWAPSLVIR  128 (699)
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc-------------c-c---cHHHHHHHhcCCCEEEEe
Confidence            753        346888999987  55 89999975  23210             0 1   147888877789999999


Q ss_pred             cceeeCCCCCc---chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHH
Q 025702          151 PVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (249)
Q Consensus       151 ~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~  227 (249)
                      ++++|||+...   .++..++.....+.          ...++|++|++++++.+++.+.  +++|||++++.+|+.|++
T Consensus       129 ~~nVYGp~~~~~~~r~I~~~l~~~~~~~----------pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~~Si~el~  196 (699)
T PRK12320        129 IAPPVGRQLDWMVCRTVATLLRSKVSAR----------PIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDTTNVVTAW  196 (699)
T ss_pred             CceecCCCCcccHhHHHHHHHHHHHcCC----------ceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCeeEHHHHH
Confidence            99999996432   23334443332222          2346999999999999998643  359999999999999999


Q ss_pred             HHHHHH
Q 025702          228 RACAKV  233 (249)
Q Consensus       228 ~~~~~~  233 (249)
                      +.+...
T Consensus       197 ~~i~~~  202 (699)
T PRK12320        197 RLLRSV  202 (699)
T ss_pred             HHHHHh
Confidence            999776

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.90  E-value=1.1e-22  Score=173.22  Aligned_cols=231  Identities=17%  Similarity=0.165  Sum_probs=159.3

Q ss_pred             CCCcccchHHHHHHHHHcCC---eEEEEecCCCcccc--CC-----CCCCchhhhh---------ccCceEEEEeccCCH
Q 025702            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQ--QL-----PGESDQEFAE---------FSSKILHLKGDRKDY   61 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~--~~-----~~~~~~~~~~---------~~~~v~~~~~d~~d~   61 (249)
                      ||||||+|.+|++.|++.+.   +|+++.|.......  .+     .......+.+         ...++.++.+|++++
T Consensus       125 TGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~  204 (605)
T PLN02503        125 TGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCES  204 (605)
T ss_pred             cCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCc
Confidence            89999999999999998753   78999997654211  00     0000000100         135789999999986


Q ss_pred             ------HHHHHhhhhCCCcEEEecCCC-------------ChhhhHHHHHhCC---CCCeEEEeeccccccCCCC----C
Q 025702           62 ------DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----L  115 (249)
Q Consensus        62 ------~~l~~~~~~~~~d~Vi~~~~~-------------~~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~----~  115 (249)
                            +.++.+.+  ++|+|||+|+.             |+.++.+++++++   +.++|||+||..|||....    .
T Consensus       205 ~LGLs~~~~~~L~~--~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~  282 (605)
T PLN02503        205 NLGLEPDLADEIAK--EVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEK  282 (605)
T ss_pred             ccCCCHHHHHHHHh--cCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeee
Confidence                  34555555  79999999985             2446888999875   4679999999999986531    1


Q ss_pred             CCCCC---------------------------------C-C--------------------CCCCCcc-cchHHHHHHHh
Q 025702          116 PHCET---------------------------------D-T--------------------VDPKSRH-KGKLNTESVLE  140 (249)
Q Consensus       116 ~~~e~---------------------------------~-~--------------------~~~~~~~-~~k~~~e~~~~  140 (249)
                      ++...                                 . +                    ..-.+.| .+|..+|.+++
T Consensus       283 ~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~  362 (605)
T PLN02503        283 PFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVIN  362 (605)
T ss_pred             ecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHH
Confidence            22100                                 0 0                    0011345 89999999986


Q ss_pred             h--cCCcEEEeeccee----------eCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC---
Q 025702          141 S--KGVNWTSLRPVYI----------YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---  205 (249)
Q Consensus       141 ~--~~~~~~~~r~~~v----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~---  205 (249)
                      +  .+++++|+||+.|          |+++... ..+.+ .....|.--.++++++...|+|++|.++++++.++..   
T Consensus       363 ~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~-~~p~~-~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~  440 (605)
T PLN02503        363 SMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRM-MDPIV-LYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGG  440 (605)
T ss_pred             HhcCCCCEEEEcCCEecccccCCccccccCccc-cchhh-hheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhc
Confidence            5  3799999999999          4443211 11111 1223443334668888999999999999999998432   


Q ss_pred             -CCCCCceEEecCC--ccccHHHHHHHHHHHhC
Q 025702          206 -EKASRQVFNISGE--KYVTFDGLARACAKVTG  235 (249)
Q Consensus       206 -~~~~~~~~~i~~~--~~~s~~~l~~~~~~~~g  235 (249)
                       ....+++||++++  .+++|.++.+.+.+++.
T Consensus       441 ~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~  473 (605)
T PLN02503        441 AAKPEINVYQIASSVVNPLVFQDLARLLYEHYK  473 (605)
T ss_pred             ccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence             1124689999998  89999999999998876

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.89  E-value=1.2e-23  Score=163.79  Aligned_cols=197  Identities=20%  Similarity=0.201  Sum_probs=113.3

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccc--cCCCCCCc-h-hhh----hccCceEEEEeccCCH------HHH
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIA--QQLPGESD-Q-EFA----EFSSKILHLKGDRKDY------DFV   64 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~--~~~~~~~~-~-~~~----~~~~~v~~~~~d~~d~------~~l   64 (249)
                      ||||||+|++|+.+|++.+.  +|+++.|..+...  +.+.+... . .+.    ....+++++.+|++++      +.+
T Consensus         2 TGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~   81 (249)
T PF07993_consen    2 TGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDY   81 (249)
T ss_dssp             E-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHH
T ss_pred             cCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHh
Confidence            79999999999999999976  9999999875521  11110000 0 011    1257999999999863      566


Q ss_pred             HHhhhhCCCcEEEecCCC-------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCC------CCCC---
Q 025702           65 KSSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLP------HCET---  120 (249)
Q Consensus        65 ~~~~~~~~~d~Vi~~~~~-------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~------~~e~---  120 (249)
                      ..+.+  ++|+|||+|+.             |+.+++++++.|.  +.++|+|+||..+.+......      ..+.   
T Consensus        82 ~~L~~--~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~  159 (249)
T PF07993_consen   82 QELAE--EVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLD  159 (249)
T ss_dssp             HHHHH--H--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE
T ss_pred             hcccc--ccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccch
Confidence            66666  89999999886             4678999999976  556999999955554433211      0111   


Q ss_pred             CCCCCCCcc-cchHHHHHHHhh----cCCcEEEeecceeeCCCC-----CcchHHHH-HHHHHcCCCeeecCCCcceEee
Q 025702          121 DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN-----YNPVEEWF-FHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~~----~~~~~~~~r~~~v~g~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      ......+.| .+|+.+|+++++    .+++++|+||+.|+|...     ...+...+ ...+..+......++.....++
T Consensus       160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~  239 (249)
T PF07993_consen  160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDL  239 (249)
T ss_dssp             --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--E
T ss_pred             hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeE
Confidence            112233346 999999999853    389999999999999322     23333333 3344444433355555566999


Q ss_pred             eeHHHHHHHH
Q 025702          190 GHVKDLARAF  199 (249)
Q Consensus       190 i~~~D~a~~~  199 (249)
                      +++|.+|++|
T Consensus       240 vPVD~va~aI  249 (249)
T PF07993_consen  240 VPVDYVARAI  249 (249)
T ss_dssp             EEHHHHHHHH
T ss_pred             ECHHHHHhhC
Confidence            9999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.86  E-value=1.9e-20  Score=164.92  Aligned_cols=192  Identities=16%  Similarity=0.160  Sum_probs=143.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++|++.|.++|++|...                             .+|++|.+.+...++..++|+|||+|
T Consensus       386 tGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        386 YGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------KGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEee-----------------------------ccccccHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999987311                             12567888888888878999999999


Q ss_pred             CCC-------------------hhhhHHHHHhCC--CCCeEEEeeccccccCC------CCCCCCCCCCCCCC-Ccc-cc
Q 025702           81 GRE-------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS------DLLPHCETDTVDPK-SRH-KG  131 (249)
Q Consensus        81 ~~~-------------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~------~~~~~~e~~~~~~~-~~~-~~  131 (249)
                      +..                   ..++.+++++|+  ++ ++|++||..+|+..      ...++.|++++.|. +.| .+
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~s  515 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKT  515 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHH
Confidence            752                   225788999987  56 57888888998632      13467787766553 667 99


Q ss_pred             hHHHHHHHhhcCCcEEEeecceeeCCCC--CcchHHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          132 KLNTESVLESKGVNWTSLRPVYIYGPLN--YNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       132 k~~~e~~~~~~~~~~~~~r~~~v~g~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      |..+|.+++.. .+..++|+.++|+...  ..+++    ..+.+... +.++      .+..+++|++.+++.+++..  
T Consensus       516 K~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv----~~~~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~~--  582 (668)
T PLN02260        516 KAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFI----TKISRYNKVVNIP------NSMTVLDELLPISIEMAKRN--  582 (668)
T ss_pred             HHHHHHHHHhh-hhheEEEEEEecccCCCCccHHH----HHHhccceeeccC------CCceehhhHHHHHHHHHHhC--
Confidence            99999999776 4788999999997532  22333    33322222 2221      24567788998888888743  


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhC
Q 025702          209 SRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       209 ~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      .+++||+++++.+|+.|+++.+.+.++
T Consensus       583 ~~giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        583 LRGIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             CCceEEecCCCcCcHHHHHHHHHHhcC
Confidence            257999999999999999999999884

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.86  E-value=1.9e-20  Score=177.16  Aligned_cols=233  Identities=19%  Similarity=0.186  Sum_probs=159.4

Q ss_pred             CCCcccchHHHHHHHHHcC----CeEEEEecCCCccccC--CCCCCch---hhhhccCceEEEEeccCC------HHHHH
Q 025702            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQ--LPGESDQ---EFAEFSSKILHLKGDRKD------YDFVK   65 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g----~~v~~~~r~~~~~~~~--~~~~~~~---~~~~~~~~v~~~~~d~~d------~~~l~   65 (249)
                      ||||||+|++++..|++.+    ++|+++.|........  +......   .......+++++.+|+.+      .+.+.
T Consensus       977 TGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~ 1056 (1389)
T TIGR03443       977 TGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWS 1056 (1389)
T ss_pred             eCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHH
Confidence            7999999999999999887    8999999976542110  0000000   000112478999999974      45566


Q ss_pred             HhhhhCCCcEEEecCCC-------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCC------------CCCCC
Q 025702           66 SSLSAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSD------------LLPHC  118 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~-------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~------------~~~~~  118 (249)
                      .+.+  ++|+|||+++.             ++.++.++++++.  +.++|+|+||..+|+...            ...+.
T Consensus      1057 ~l~~--~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~ 1134 (1389)
T TIGR03443      1057 DLTN--EVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIP 1134 (1389)
T ss_pred             HHHh--cCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCC
Confidence            6666  89999999875             3456888899876  678999999999986421            11223


Q ss_pred             CCCC-----CCCCCcc-cchHHHHHHHhh---cCCcEEEeecceeeCCCCCcc-----hHHHHHHHHHcCCCeeecCCCc
Q 025702          119 ETDT-----VDPKSRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGI  184 (249)
Q Consensus       119 e~~~-----~~~~~~~-~~k~~~e~~~~~---~~~~~~~~r~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  184 (249)
                      |+..     ..+.+.| .+|+.+|.++..   .+++++++||+.|||+...+.     ++..++.....-..+   .+..
T Consensus      1135 e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~---p~~~ 1211 (1389)
T TIGR03443      1135 ESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLI---PNIN 1211 (1389)
T ss_pred             cccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCc---CCCC
Confidence            3321     1223346 999999998743   589999999999999864322     233333322222222   3344


Q ss_pred             ceEeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          185 QVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      ..+++++++|++++++.++.++.  ..+.+||++++..+++.++++.+.+. |.+.+
T Consensus      1212 ~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~ 1267 (1389)
T TIGR03443      1212 NTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE 1267 (1389)
T ss_pred             CccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC
Confidence            56899999999999999987653  23458999999899999999999764 65433

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.85  E-value=3.2e-20  Score=155.76  Aligned_cols=215  Identities=17%  Similarity=0.144  Sum_probs=144.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhh----hhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF----AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      |||+|+||++++++|++.|++|++++|+...............+    .....+++++.+|+.|.+.+.+.+.  ++|+|
T Consensus        86 TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg--giDiV  163 (576)
T PLN03209         86 AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG--NASVV  163 (576)
T ss_pred             ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc--CCCEE
Confidence            69999999999999999999999999987653211000000000    0001358899999999999999888  89999


Q ss_pred             EecCCCC--------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           77 YDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        77 i~~~~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      ||++|..              ..++.++++++.  +++|||++||.+++...    .... .......+ ..|..+|+.+
T Consensus       164 Vn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~-~~~sk~~~~~~KraaE~~L  238 (576)
T PLN03209        164 ICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAA-ILNLFWGVLCWKRKAEEAL  238 (576)
T ss_pred             EEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----cccc-chhhHHHHHHHHHHHHHHH
Confidence            9998752              235778888876  78899999998763111    0000 11122223 6788899999


Q ss_pred             hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC-CCCceEEecCC
Q 025702          140 ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGE  218 (249)
Q Consensus       140 ~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~  218 (249)
                      +..+++|++||||+++++.+...          ....+............+..+|+|+++++++.++. ..+.+|.+.++
T Consensus       239 ~~sGIrvTIVRPG~L~tp~d~~~----------~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~  308 (576)
T PLN03209        239 IASGLPYTIVRPGGMERPTDAYK----------ETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAE  308 (576)
T ss_pred             HHcCCCEEEEECCeecCCccccc----------cccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeC
Confidence            99999999999999988742110          00111111111111235788999999999999764 56788988887


Q ss_pred             ccccHHHHHHHHHH
Q 025702          219 KYVTFDGLARACAK  232 (249)
Q Consensus       219 ~~~s~~~l~~~~~~  232 (249)
                      .......+.+++.+
T Consensus       309 ~~~p~~~~~~~~~~  322 (576)
T PLN03209        309 TTAPLTPMEELLAK  322 (576)
T ss_pred             CCCCCCCHHHHHHh
Confidence            64444444444443

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.83  E-value=2.5e-19  Score=141.14  Aligned_cols=236  Identities=15%  Similarity=0.142  Sum_probs=150.4

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccC--CC-CCC-chh-hhhccCceEEEEeccCC------HHHHHHhh
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQ--LP-GES-DQE-FAEFSSKILHLKGDRKD------YDFVKSSL   68 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~--~~-~~~-~~~-~~~~~~~v~~~~~d~~d------~~~l~~~~   68 (249)
                      ||||||+|++++.+|+..- .+|++++|..+.....  +. ... ... -+.+..+++++.+|+..      ...+..+.
T Consensus         6 TGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La   85 (382)
T COG3320           6 TGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA   85 (382)
T ss_pred             ecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh
Confidence            8999999999999999875 5999999988742110  00 000 001 11345799999999983      45666666


Q ss_pred             hhCCCcEEEecCCC-------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCC----CCCCCCCC-----CC
Q 025702           69 SAKGFDVVYDINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL----LPHCETDT-----VD  124 (249)
Q Consensus        69 ~~~~~d~Vi~~~~~-------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~----~~~~e~~~-----~~  124 (249)
                      +  .+|.|||+++.             |+.++..+++.+.  +.|.|+|+||.+|+.....    ...+++.+     ..
T Consensus        86 ~--~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~  163 (382)
T COG3320          86 E--NVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQG  163 (382)
T ss_pred             h--hcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccCc
Confidence            6  89999999874             6778999999855  7888999999999753221    11111111     12


Q ss_pred             CCCcc-cchHHHHHHHhh---cCCcEEEeecceeeCCCCC-----cchHHHHHHHHHcCCCeee--------cCCCcceE
Q 025702          125 PKSRH-KGKLNTESVLES---KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPI--------PGSGIQVT  187 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~~---~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  187 (249)
                      +.+.| .||+.+|..+++   .|++++|+|||+|.|+...     ..++..++..+.+-..++-        +.+.....
T Consensus       164 ~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~p~~~v~~~  243 (382)
T COG3320         164 LAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDMLPVDHVARA  243 (382)
T ss_pred             cCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhhCccceeeEE
Confidence            33445 999999999864   5899999999999997542     2345555555544333221        11111112


Q ss_pred             eeeeHHHHHHHHHHHhcCCCCCCceEE-ecCCccccHHHHHHHHHH--HhCCCc
Q 025702          188 QLGHVKDLARAFVQVLGNEKASRQVFN-ISGEKYVTFDGLARACAK--VTGYCI  238 (249)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~l~~~~~~--~~g~~~  238 (249)
                      ....+.-+++++..+..++...-..|+ ..-|..+...++.++..+  ..+.+.
T Consensus       244 v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~~~~a~~~~  297 (382)
T COG3320         244 VVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLISLDIAGYPE  297 (382)
T ss_pred             eehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhhhhccCCch
Confidence            222333444444454444433223443 344778999999999988  444443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.2e-18  Score=137.88  Aligned_cols=206  Identities=17%  Similarity=0.170  Sum_probs=141.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||++++++|+++|++|+++.|++..... +       ......++.++.+|++|.+++.+++++     .++|+
T Consensus         8 tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~-~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          8 TGASSGFGRGMTERLLARGDRVAATVRRPDALDD-L-------KARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H-------HHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998644211 0       011134688999999999988877753     25899


Q ss_pred             EEecCCCC--------------------hhhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~--------------------~~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|..                    ..++.++++++    +  +.+++|++||.....           +..+.+.|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  148 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI-----------AYPGFSLY  148 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc-----------CCCCCchh
Confidence            99998752                    12344455553    3  567999999865421           11234456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeeccee---eCCCCCc--------chHHHHHHHHHcCCCeeecCCCcceEeee
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYI---YGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v---~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                       .+|...|.+++       ..+++++++||+.+   ||++...        ......+........+.         -+.
T Consensus       149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  219 (276)
T PRK06482        149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFA---------IPG  219 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCC---------CCC
Confidence             89988886653       25899999999988   5543211        11111111111221111         135


Q ss_pred             eHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +++|++++++.++..+.. +..|++++++..+..++++.+.+.++
T Consensus       220 d~~~~~~a~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        220 DPQKMVQAMIASADQTPA-PRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             CHHHHHHHHHHHHcCCCC-CeEEecChHHHHHHHHHHHHHHHHHH
Confidence            689999999999987643 56799999999999888888887776

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.81  E-value=1.2e-18  Score=128.95  Aligned_cols=233  Identities=17%  Similarity=0.145  Sum_probs=169.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCc-hhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-QEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      ||-||.=|+.|+.-|+..||+|.++.|..+.....--+.+. -+..--......+++|++|...|.+++...+|+-|+|+
T Consensus        34 TGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEiYnL  113 (376)
T KOG1372|consen   34 TGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEVYNL  113 (376)
T ss_pred             ecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhhhhh
Confidence            68999999999999999999999999987763210000000 00000135678899999999999999998899999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC-----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHH
Q 025702           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (249)
                      ++..                ..++.++++|++     ..-||...||...||.....|..|..|+.|.++| .+|..+-=
T Consensus       114 aAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~W  193 (376)
T KOG1372|consen  114 AAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYW  193 (376)
T ss_pred             hhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheE
Confidence            8863                346888888854     4459999999999999999999999999999998 77764422


Q ss_pred             ----HHhhcCCcEEEeecceeeCCCCCcchHHHH----HHHHHcC-CCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          138 ----VLESKGVNWTSLRPVYIYGPLNYNPVEEWF----FHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       138 ----~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                          +.+.+++-.+.=.+.+--.|.....++..-    +.++.-+ ......|+-...++|-|..|.+++|+.++.++.+
T Consensus       194 ivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~P  273 (376)
T KOG1372|consen  194 IVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSP  273 (376)
T ss_pred             EEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCC
Confidence                223344433332222222354444444332    2222222 2223347778889999999999999999999764


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhC
Q 025702          209 SRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       209 ~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                        ..|.|+.++..|++|+++.-...+|
T Consensus       274 --dDfViATge~hsVrEF~~~aF~~ig  298 (376)
T KOG1372|consen  274 --DDFVIATGEQHSVREFCNLAFAEIG  298 (376)
T ss_pred             --CceEEecCCcccHHHHHHHHHHhhC
Confidence              7899999999999999999999988

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.81  E-value=6.8e-18  Score=133.49  Aligned_cols=207  Identities=24%  Similarity=0.272  Sum_probs=158.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||||++|++++++|+++|++|++++|++.......            .+++++..|+.+...+...++  +.+.++++.
T Consensus         6 ~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~--G~~~~~~i~   71 (275)
T COG0702           6 TGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAK--GVDGVLLIS   71 (275)
T ss_pred             EecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhc--cccEEEEEe
Confidence            699999999999999999999999999988743321            589999999999999999998  999999887


Q ss_pred             CCC-------hh---hhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEe
Q 025702           81 GRE-------AD---EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (249)
Q Consensus        81 ~~~-------~~---~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~  149 (249)
                      +..       ..   ...+..+++. +.++++++|.....            ...+..+..+|..+|..+...+++++++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~------------~~~~~~~~~~~~~~e~~l~~sg~~~t~l  139 (275)
T COG0702          72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGAD------------AASPSALARAKAAVEAALRSSGIPYTTL  139 (275)
T ss_pred             cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCC------------CCCccHHHHHHHHHHHHHHhcCCCeEEE
Confidence            632       11   2233444444 57788888876641            2233444489999999999999999999


Q ss_pred             ecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHH
Q 025702          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA  229 (249)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~  229 (249)
                      |+..+|.......    .......+.++...+.+  ..+++..+|++.++...+..+...+++|.+++++..+..++++.
T Consensus       140 r~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~  213 (275)
T COG0702         140 RRAAFYLGAGAAF----IEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASG  213 (275)
T ss_pred             ecCeeeeccchhH----HHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHH
Confidence            9776665422111    22233344443333332  67999999999999999998877789999999999999999999


Q ss_pred             HHHHhCCCcc
Q 025702          230 CAKVTGYCIA  239 (249)
Q Consensus       230 ~~~~~g~~~~  239 (249)
                      +.+..|.+..
T Consensus       214 l~~~~gr~~~  223 (275)
T COG0702         214 LDYTIGRPVG  223 (275)
T ss_pred             HHHHhCCcce
Confidence            9999997643

>PRK09135 pteridine reductase; Provisional

Probab=99.79  E-value=1.8e-18  Score=134.77  Aligned_cols=198  Identities=20%  Similarity=0.207  Sum_probs=129.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|++|++++++|+++|++|++++|+.......+.    ..+.. ....+.++.+|++|.+++..+++..     ++|
T Consensus        12 tGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135         12 TGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALA----AELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987543211110    00111 1245888999999999988888642     689


Q ss_pred             EEEecCCCC--------------------hhhhHHHHHhCC-----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           75 VVYDINGRE--------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        75 ~Vi~~~~~~--------------------~~~~~~~~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +|||+++..                    ..++.++++++.     ....++.+++..           +..+..+...|
T Consensus        88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Y  156 (249)
T PRK09135         88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH-----------AERPLKGYPVY  156 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh-----------hcCCCCCchhH
Confidence            999999842                    223455666642     233555555422           22344566667


Q ss_pred             -cchHHHHHHHhh------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 -~~k~~~e~~~~~------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                       .+|..+|.+++.      .+++++++||+.++||.....+..........+.++.         .+.+++|+++++..+
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~~  227 (249)
T PRK09135        157 CAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLK---------RIGTPEDIAEAVRFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcC---------CCcCHHHHHHHHHHH
Confidence             999999887642      2589999999999999753322222222222222211         122479999999766


Q ss_pred             hcC-CCCCCceEEecCCcccc
Q 025702          203 LGN-EKASRQVFNISGEKYVT  222 (249)
Q Consensus       203 ~~~-~~~~~~~~~i~~~~~~s  222 (249)
                      +.. +...|++|++.++..++
T Consensus       228 ~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        228 LADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             cCccccccCcEEEECCCeecc
Confidence            654 33468899999988654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.79  E-value=3.2e-18  Score=134.46  Aligned_cols=203  Identities=16%  Similarity=0.116  Sum_probs=133.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|++.......     .++......+.++.+|++|.+.+.++++..     ++|+
T Consensus        13 tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   87 (262)
T PRK13394         13 TGAASGIGKEIALELARAGAAVAIADLNQDGANAVA-----DEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI   87 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-----HHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999875422111     111222346788999999999888877632     4899


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhC-C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DE----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                    .+    +..+++++ +  +.+++|++||...+..           ..+...
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~  156 (262)
T PRK13394         88 LVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA-----------SPLKSA  156 (262)
T ss_pred             EEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC-----------CCCCcc
Confidence            999998621                    11    44566666 4  5789999998654311           122334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHH---cCCCeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK---AGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|...+.+++       ..+++++++||+.++++..... +........   ......++..+....++++++|+++
T Consensus       157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  235 (262)
T PRK13394        157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQ-IPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ  235 (262)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhh-hHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            5 78887776553       2478999999999999852111 111100000   0000011122334568999999999


Q ss_pred             HHHHHhcCCCC--CCceEEecCCcc
Q 025702          198 AFVQVLGNEKA--SRQVFNISGEKY  220 (249)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~i~~~~~  220 (249)
                      +++.+++.+..  .|+.|++.++..
T Consensus       236 a~~~l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        236 TVLFLSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HHHHHcCccccCCcCCEEeeCCcee
Confidence            99999976432  478898887643

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=6.6e-18  Score=131.52  Aligned_cols=196  Identities=18%  Similarity=0.202  Sum_probs=131.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|+.......+.    ........++.++.+|+.|.+.+.++++..     ++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   87 (249)
T PRK12825         12 TGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELV----EAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDI   87 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH----HHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999888887654211110    111112356889999999999988887632     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+..++++++    +  +.+++|++||...+...           .+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~-----------~~~~~y  156 (249)
T PRK12825         88 LVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW-----------PGRSNY  156 (249)
T ss_pred             EEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-----------CCchHH
Confidence            999988421                    1222334442    3  57899999998775221           123345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+++       ..+++++++||+.++++.............    .. .     .....+++.+|+++++.+
T Consensus       157 ~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~----~~-~-----~~~~~~~~~~dva~~~~~  226 (249)
T PRK12825        157 AAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK----DA-E-----TPLGRSGTPEDIARAVAF  226 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh----hc-c-----CCCCCCcCHHHHHHHHHH
Confidence             78877765542       358999999999999986432222111111    00 0     012238899999999999


Q ss_pred             HhcCC--CCCCceEEecCCccc
Q 025702          202 VLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++.++  ...|+.|+++++..+
T Consensus       227 ~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        227 LCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HhCccccCcCCCEEEeCCCEee
Confidence            99765  336899999998754

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.78  E-value=6.6e-18  Score=132.37  Aligned_cols=198  Identities=16%  Similarity=0.194  Sum_probs=130.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|++.+.....     ..+.....++.++.+|+.|.+++.++++..     .+|+
T Consensus        10 tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   84 (258)
T PRK12429         10 TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA-----EALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI   84 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876532111     111112356888999999999888877632     6899


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+    .+.++.+++  +.++||++||...+..           ..+.+.|
T Consensus        85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y  153 (258)
T PRK12429         85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG-----------SAGKAAY  153 (258)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCCcchh
Confidence            999987521                    11    344555554  5789999998765321           1233445


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcC--CCe-----eecCCCcceEeeeeHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--RPI-----PIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~i~~~D  194 (249)
                       .+|...+.+.+       ..+++++++||+.+++|.....     +......  .+.     ..+........+++++|
T Consensus       154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (258)
T PRK12429        154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE  228 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCCccccCCHHH
Confidence             77776665542       3578999999999999852111     1111000  000     00111223357999999


Q ss_pred             HHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +|+++..++....  ..++.|++.+|.
T Consensus       229 ~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        229 IADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             HHHHHHHHcCccccCccCCeEEeCCCE
Confidence            9999999987643  247889888764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.77  E-value=1.2e-17  Score=130.41  Aligned_cols=196  Identities=17%  Similarity=0.148  Sum_probs=131.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|.++++.|+++|++|++++|+..+.....     ..+......+.++.+|+.|.+++.++++..     .+|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826         12 TGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA-----ELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999864321100     011111345889999999999988888642     6899


Q ss_pred             EEecCCCChh--------------------hhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------EVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++....                    +...+++++    .  +.+++|++||...++.          +..+...|
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------~~~~~~~y  156 (251)
T PRK12826         87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------GYPGLAHY  156 (251)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------CCCCccHH
Confidence            9999875321                    123344443    2  5678999999876411          11223446


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|..++.+++       ..+++++++||+.++|+.........+........++         ..+++++|+|+++..
T Consensus       157 ~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~  227 (251)
T PRK12826        157 AASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEPEDIAAAVLF  227 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             88887776652       3478999999999999853221111111222222221         147889999999999


Q ss_pred             HhcCCC--CCCceEEecCCcc
Q 025702          202 VLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++..+.  ..|+.|++.+|..
T Consensus       228 l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        228 LASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             HhCccccCcCCcEEEECCCcc
Confidence            887643  2588999988663

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.77  E-value=1e-17  Score=131.01  Aligned_cols=199  Identities=18%  Similarity=0.205  Sum_probs=128.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|++.......     ..+.....++.++.+|+.|.+++..+++.     .++|+
T Consensus         7 tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         7 TGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAA-----KVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421110     01111134688899999999977666542     26899


Q ss_pred             EEecCCCCh--------------------hhhHHHHH----hCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~----a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+...+++    .++  +.+++|++||...+...           .....|
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~-----------~~~~~y  150 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS-----------PFKSAY  150 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC-----------CCCchh
Confidence            999987521                    11222333    333  56799999987654321           112345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCee-------ecCCCcceEeeeeHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP-------IPGSGIQVTQLGHVKD  194 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~D  194 (249)
                       .+|...+.+.+       ..+++++++||+.++++...     ..+..........       ....+...+++++++|
T Consensus       151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  225 (255)
T TIGR01963       151 VAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE-----KQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE  225 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH-----HHHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence             78877776553       24789999999999998421     1111111111100       0112334567999999


Q ss_pred             HHHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          195 LARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +|++++++++.+.  ..++.|++.++..
T Consensus       226 ~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       226 VAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHHHHHHcCccccCccceEEEEcCccc
Confidence            9999999998642  2577899987653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.76  E-value=2.6e-17  Score=116.60  Aligned_cols=191  Identities=21%  Similarity=0.278  Sum_probs=137.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||||.+|++|+++++++||+|++++|++.+...             .+++.+++.|+.|.+++.+.+.  ++|+||...
T Consensus         6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~-------------~~~~~i~q~Difd~~~~a~~l~--g~DaVIsA~   70 (211)
T COG2910           6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAA-------------RQGVTILQKDIFDLTSLASDLA--GHDAVISAF   70 (211)
T ss_pred             EecCchhHHHHHHHHHhCCCeeEEEEeChHhccc-------------cccceeecccccChhhhHhhhc--CCceEEEec
Confidence            5999999999999999999999999999988432             2578889999999999999998  999999876


Q ss_pred             CCChh--------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHH--HH-hhcCCcE
Q 025702           81 GREAD--------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES--VL-ESKGVNW  146 (249)
Q Consensus        81 ~~~~~--------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~--~~-~~~~~~~  146 (249)
                      +....        ....+++.++  ++.|++.+++.+..--... ..-.+.|.-|..|+ .++..+|.  .+ .+.+++|
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~W  149 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDW  149 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCCchhHHHHHHHHHHHHHHHhhccCcce
Confidence            55422        2445777777  7899999988665422211 12233455566666 66666663  33 3456999


Q ss_pred             EEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEec
Q 025702          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (249)
Q Consensus       147 ~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~  216 (249)
                      +.+-|+.+|-|+...+-.       +-++...+...  .--+.|+..|.|-+++..++++....+.|-+.
T Consensus       150 TfvSPaa~f~PGerTg~y-------rlggD~ll~n~--~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         150 TFVSPAAFFEPGERTGNY-------RLGGDQLLVNA--KGESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             EEeCcHHhcCCccccCce-------EeccceEEEcC--CCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            999999999997533210       11221111111  12378999999999999999998877777653

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.7e-17  Score=128.88  Aligned_cols=211  Identities=20%  Similarity=0.216  Sum_probs=140.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|++.......     ..+...  ..++.++.+|+.|++++.++++..     ++
T Consensus        13 tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875         13 TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAA-----EEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            699999999999999999999999999865421110     011110  246788899999999888877643     68


Q ss_pred             cEEEecCCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        74 d~Vi~~~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      |+|||+++...                     .....++++    +.  +..+++++||...+..           ..+.
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~  156 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-----------HRWF  156 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-----------CCCC
Confidence            99999987420                     112223333    21  3458999999776422           1223


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      +.| .+|...|.+++       ..+++++.+||+.+.++...... ............+         ...+.+++|+++
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~  227 (276)
T PRK05875        157 GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP---------LPRVGEVEDVAN  227 (276)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC---------CCCCcCHHHHHH
Confidence            456 89998888774       24689999999998876421100 0011111111111         123567999999


Q ss_pred             HHHHHhcCCCC--CCceEEecCCccc----cHHHHHHHHHHHhCC
Q 025702          198 AFVQVLGNEKA--SRQVFNISGEKYV----TFDGLARACAKVTGY  236 (249)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~i~~~~~~----s~~~l~~~~~~~~g~  236 (249)
                      ++.++++++..  .++++++.++..+    +..|+++.+.+..|.
T Consensus       228 ~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        228 LAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            99999987543  4789999998876    778888877766553

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5e-18  Score=134.34  Aligned_cols=206  Identities=18%  Similarity=0.161  Sum_probs=138.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|++.......        ......+.++.+|++|.+++.++++.     .++|+
T Consensus         9 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          9 TGASRGFGRAWTEAALERGDRVVATARDTATLADLA--------EKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------HhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421100        01134678889999999988877764     26899


Q ss_pred             EEecCCCChh--------------------hh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|....                    .+    +.++..++  +.+++|++||...+...           .....|
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y  149 (275)
T PRK08263         81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF-----------PMSGIY  149 (275)
T ss_pred             EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC-----------CCccHH
Confidence            9999986311                    12    23333333  56799999997765321           122345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch--------HHHHHHHHHcCCCeeecCCCcceEee-eeH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--------EEWFFHRLKAGRPIPIPGSGIQVTQL-GHV  192 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~  192 (249)
                       .+|...+.+.+       ..+++++++||+.+..+......        .........+.         .....+ +++
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~p  220 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ---------WSERSVDGDP  220 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH---------HHhccCCCCH
Confidence             88988776542       36899999999988776421100        01111111110         111234 789


Q ss_pred             HHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHh
Q 025702          193 KDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVT  234 (249)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~  234 (249)
                      +|++++++.+++.+...++.|+..++..+++.++.+.+.+.-
T Consensus       221 ~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (275)
T PRK08263        221 EAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE  262 (275)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence            999999999999876555555555557799999998888763

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.5e-17  Score=127.58  Aligned_cols=203  Identities=19%  Similarity=0.235  Sum_probs=130.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+.......+    ...+.....++.++.+|++|.+.+..+++.     .++|+
T Consensus        12 tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806         12 TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKV----VAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            699999999999999999999999998754311111    011111134678899999999988877763     26899


Q ss_pred             EEecCCCC--------------hhhhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHH
Q 025702           76 VYDINGRE--------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        76 Vi~~~~~~--------------~~~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (249)
                      |||+++..              ..+..++++++.    +..++|++||........    .+.  ......| .+|..+|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~--~~~~~~Y~~sK~a~e  161 (248)
T PRK07806         88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKT--MPEYEPVARSKRAGE  161 (248)
T ss_pred             EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccC--CccccHHHHHHHHHH
Confidence            99998642              223555666643    345899999855421100    011  1113345 8999999


Q ss_pred             HHHhh-------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       137 ~~~~~-------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      .+++.       .++++++++|+.+-++.     ...+...   ..+-...........+++++|++++++.+++.+...
T Consensus       162 ~~~~~l~~~~~~~~i~v~~v~pg~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  233 (248)
T PRK07806        162 DALRALRPELAEKGIGFVVVSGDMIEGTV-----TATLLNR---LNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPS  233 (248)
T ss_pred             HHHHHHHHHhhccCeEEEEeCCccccCch-----hhhhhcc---CCHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccC
Confidence            87643       57889999988776652     1111100   000000000001236899999999999999977667


Q ss_pred             CceEEecCCccc
Q 025702          210 RQVFNISGEKYV  221 (249)
Q Consensus       210 ~~~~~i~~~~~~  221 (249)
                      +++|++++++..
T Consensus       234 g~~~~i~~~~~~  245 (248)
T PRK07806        234 GHIEYVGGADYF  245 (248)
T ss_pred             ccEEEecCccce
Confidence            899999998743

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5e-17  Score=126.84  Aligned_cols=194  Identities=18%  Similarity=0.211  Sum_probs=131.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|+........     ..+.....++.++.+|++|.+++..+++..     .+|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774         12 TGAAGGIGQAYAEALAREGASVVVADINAEGAERVA-----KQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421110     011111235778899999999887777632     6899


Q ss_pred             EEecCCCCh-----------------------hhhHHHHHhCC------CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA-----------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        76 Vi~~~~~~~-----------------------~~~~~~~~a~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      |||+++...                       .+..++++++.      +.+++|++||...|.              +.
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------~~  152 (250)
T PRK07774         87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--------------YS  152 (250)
T ss_pred             EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC--------------Cc
Confidence            999998521                       12233333322      356999999987752              23


Q ss_pred             Ccc-cchHHHHHHHhh-------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          127 SRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~~-------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      +.| .+|...|.+.+.       .++++++++||.+..+.........+.....++.+..         -+.+++|++++
T Consensus       153 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~  223 (250)
T PRK07774        153 NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLS---------RMGTPEDLVGM  223 (250)
T ss_pred             cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence            456 899988877532       3688999999998877533222222333333333221         13468999999


Q ss_pred             HHHHhcCCC--CCCceEEecCCcccc
Q 025702          199 FVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      ++.++....  ..++.|++.+++.++
T Consensus       224 ~~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        224 CLFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             HHHHhChhhhCcCCCEEEECCCeecc
Confidence            999987642  367899999987653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.73  E-value=3.4e-16  Score=122.89  Aligned_cols=192  Identities=15%  Similarity=0.182  Sum_probs=126.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++... . .    ...+......+.++.+|++|.+++.++++.     .++|+
T Consensus        14 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~-~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (260)
T PRK12823         14 TGAAQGIGRGVALRAAAEGARVVLVDRSELVH-E-V----AAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV   87 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCchHHH-H-H----HHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence            79999999999999999999999999874221 0 0    011111234678889999998888777763     26899


Q ss_pred             EEecCCCCh--h-----------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--D-----------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--~-----------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++...  .                       .++.++..++  +..++|++||...++.            ....|
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~~~Y  155 (260)
T PRK12823         88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------NRVPY  155 (260)
T ss_pred             EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------CCCcc
Confidence            999997321  0                       1223455543  4568999999876531            11123


Q ss_pred             ccchHHHHHHHh-------hcCCcEEEeecceeeCCCCC------------cchHHHHHHHHHcCCCeeecCCCcceEee
Q 025702          129 HKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       129 ~~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      ..+|...+.+.+       ..+++++.++|+++++|...            ....+.+........++         .-+
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  226 (260)
T PRK12823        156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM---------KRY  226 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc---------ccC
Confidence            389988887653       24799999999999997310            01111222222222222         123


Q ss_pred             eeHHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      .+++|+++++++++....  ..|+.+++.+++
T Consensus       227 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        227 GTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            468999999999987642  357889988765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.73  E-value=1.8e-17  Score=129.89  Aligned_cols=201  Identities=17%  Similarity=0.224  Sum_probs=131.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|.++++.|+++|++|++++|+........        .+....+.++.+|++|.+++..+++..     .+|+
T Consensus        12 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067         12 TGAASGIGEAVAERYLAEGARVVIADIKPARARLAA--------LEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--------HHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999876422110        111246888999999999888877642     6899


Q ss_pred             EEecCCCC--------------------hhhhHHHHHhCC-------CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGRE--------------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~--------------------~~~~~~~~~a~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++..                    ......+++++.       ...++|++||.....           +..+...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  152 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR-----------GEALVSH  152 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC-----------CCCCCch
Confidence            99998752                    112334444432       125899999854311           1123344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHc---CCCeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA---GRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|...+.+.+       ..+++++.++|+.++++.... .. ........   +......+.......+.+++|+|+
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (257)
T PRK07067        153 YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ-VD-ALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG  230 (257)
T ss_pred             hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh-hh-hhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence            5 88988776653       368899999999999974211 00 00000000   000001122223457889999999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCcccc
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      ++++++....  ..|++|++.+|+.+|
T Consensus       231 ~~~~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        231 MALFLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             HHHHHhCcccccccCcEEeecCCEeCC
Confidence            9999998643  358899999987654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.72  E-value=9.1e-17  Score=124.42  Aligned_cols=185  Identities=17%  Similarity=0.226  Sum_probs=126.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|++.+..+...     ++.  ..+++++.+|+.|.+++.++++..     ++|+
T Consensus        13 tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828         13 TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP-----GVP--ADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHH-----HHh--hcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            6999999999999999999999999998755321110     000  235778889999999888877632     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    ....++++++    .  +.+++|++||...++..           .+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~y  154 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----------PGMGAY  154 (239)
T ss_pred             EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----------CCcchh
Confidence            999987521                    1223344442    2  57799999998876332           123345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+++       ..+++++.+||+.++++.....              ..  .  .....+++++|+++++.+
T Consensus       155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--------------~~--~--~~~~~~~~~~dva~~~~~  216 (239)
T PRK12828        155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--------------MP--D--ADFSRWVTPEQIAAVIAF  216 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--------------CC--c--hhhhcCCCHHHHHHHHHH
Confidence             77776665542       3579999999999998731100              00  0  112237899999999999


Q ss_pred             HhcCCC--CCCceEEecCCccc
Q 025702          202 VLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      ++.+..  ..++.+.+.+++.+
T Consensus       217 ~l~~~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        217 LLSDEAQAITGASIPVDGGVAL  238 (239)
T ss_pred             HhCcccccccceEEEecCCEeC
Confidence            998653  25788888887643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.72  E-value=4.1e-16  Score=121.25  Aligned_cols=194  Identities=16%  Similarity=0.199  Sum_probs=128.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|++.+.....     ........++.++.+|+.|.+++.+++++     ..+|.
T Consensus        11 tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653         11 TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-----AELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999999875522110     11111235688889999999988887763     25799


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    ....++++++    .  +.+++|++||.....           ...+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~-----------~~~~~~~y  154 (246)
T PRK05653         86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT-----------GNPGQTNY  154 (246)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------CCCCCcHh
Confidence            999987521                    1223344443    2  567999999865421           11233345


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.       ...+++++++||+.++++.... .............         ....+++.+|+++++.+
T Consensus       155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~  224 (246)
T PRK05653        155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKEI---------PLGRLGQPEEVANAVAF  224 (246)
T ss_pred             HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHH
Confidence             7787665543       2357899999999999985321 1111111111111         11457889999999999


Q ss_pred             HhcCC--CCCCceEEecCCcc
Q 025702          202 VLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++...  ...++.|++++|..
T Consensus       225 ~~~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        225 LASDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             HcCchhcCccCCEEEeCCCee
Confidence            98653  23578999988764

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.72  E-value=4.1e-16  Score=122.17  Aligned_cols=204  Identities=14%  Similarity=0.118  Sum_probs=137.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++........     .+  ...+++++.+|+.|.+++...++..     ++|+
T Consensus         8 tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          8 TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFAD-----AL--GDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998654211100     00  0246888999999999988777632     5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+...+++++    .  +..++|++||...+...            ....|
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~y  148 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL------------GHPAY  148 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC------------CCccc
Confidence            999997531                    1122233332    2  45689999986542110            11235


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc--hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                       .+|...+.+++       ..+++++.++|++++++.....  ..+.+.......         ....++++++|+++++
T Consensus       149 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~  219 (257)
T PRK07074        149 SAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW---------YPLQDFATPDDVANAV  219 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc---------CCCCCCCCHHHHHHHH
Confidence             78887776653       2478999999999988752111  011121211111         1234789999999999


Q ss_pred             HHHhcCC--CCCCceEEecCCccccHHHHHHHHHH
Q 025702          200 VQVLGNE--KASRQVFNISGEKYVTFDGLARACAK  232 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~~s~~~l~~~~~~  232 (249)
                      +++++..  ...|..+++.++...+..|+++.+.+
T Consensus       220 ~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        220 LFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999753  23578889999988889999887654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=3e-16  Score=122.60  Aligned_cols=197  Identities=14%  Similarity=0.069  Sum_probs=127.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||++++++|+++|++|++..|.........    ..........+.++.+|+++.+++..+++.     .++|+
T Consensus        12 tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077         12 TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNET----LKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999988776543211100    001111124567888999999888777663     26899


Q ss_pred             EEecCCCChh--------------------hhHHHHH----hCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREAD--------------------EVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~~~~~~----a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      |||++|....                    +...+++    .++...++|++||...+.           +..+...| .
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~  156 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----------PAYGLSIYGA  156 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----------CCCCchHHHH
Confidence            9999985210                    1222233    333446899999977652           22344556 8


Q ss_pred             chHHHHHHHh----h--cCCcEEEeecceeeCCCCCc--chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          131 GKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       131 ~k~~~e~~~~----~--~~~~~~~~r~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      +|...|.+++    +  .++.+.+++|+.+.++....  .............  .      .....+++++|+|++++.+
T Consensus       157 sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~dva~~~~~~  228 (252)
T PRK06077        157 MKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK--F------TLMGKILDPEEVAEFVAAI  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHh--c------CcCCCCCCHHHHHHHHHHH
Confidence            8988877653    2  26889999999988763210  0000000000110  1      1123579999999999999


Q ss_pred             hcCCCCCCceEEecCCcc
Q 025702          203 LGNEKASRQVFNISGEKY  220 (249)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~  220 (249)
                      ++.+...++.|++.++..
T Consensus       229 ~~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        229 LKIESITGQVFVLDSGES  246 (252)
T ss_pred             hCccccCCCeEEecCCee
Confidence            987666788999998864

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.3e-16  Score=122.54  Aligned_cols=194  Identities=19%  Similarity=0.258  Sum_probs=124.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEE-ecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh---------
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~---------   70 (249)
                      |||+|++|+++++.|+++|++|+++ .|+..+.....     ..+......+.++.+|++|.+++.++++.         
T Consensus        12 tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~   86 (254)
T PRK12746         12 TGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETI-----REIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV   86 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence            7999999999999999999999876 45543211100     01111134688899999999998887764         


Q ss_pred             --CCCcEEEecCCCChh--------------------hhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           71 --KGFDVVYDINGREAD--------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        71 --~~~d~Vi~~~~~~~~--------------------~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                        .++|+|||++|....                    +..+++++    +++..++|++||..++..           ..
T Consensus        87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~-----------~~  155 (254)
T PRK12746         87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG-----------FT  155 (254)
T ss_pred             CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC-----------CC
Confidence              268999999986211                    22233333    233458999999877532           12


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      +...| .+|...+.+.+       ..++++++++|+.+.++..................        .....+++++|++
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva  227 (254)
T PRK12746        156 GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS--------SVFGRIGQVEDIA  227 (254)
T ss_pred             CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc--------CCcCCCCCHHHHH
Confidence            23345 88988876642       35789999999999887421110000011111111        1123466899999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCC
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~  218 (249)
                      +++..++..+.  ..|+.|++.++
T Consensus       228 ~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        228 DAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHcCcccCCcCCCEEEeCCC
Confidence            99998887643  25789999876

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.2e-16  Score=123.98  Aligned_cols=192  Identities=18%  Similarity=0.152  Sum_probs=124.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|+.......     ...+......+.++.+|++|.+++.++++..     ++|+
T Consensus        16 tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (274)
T PRK07775         16 AGASSGIGAATAIELAAAGFPVALGARRVEKCEEL-----VDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV   90 (274)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            69999999999999999999999999875432111     0111111246788899999999998877642     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .++.+++++    +.  +..+||++||...+...           .+...|
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  159 (274)
T PRK07775         91 LVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR-----------PHMGAY  159 (274)
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----------CCcchH
Confidence            999998631                    112223333    22  45689999998765321           123345


Q ss_pred             -cchHHHHHHHhh-------cCCcEEEeecceeeCCCCC---cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          130 -KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       130 -~~k~~~e~~~~~-------~~~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                       .+|...|.+++.       .+++++++|||.+.++...   ......+.......      + ......+++++|+|++
T Consensus       160 ~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~dva~a  232 (274)
T PRK07775        160 GAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW------G-QARHDYFLRASDLARA  232 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh------c-ccccccccCHHHHHHH
Confidence             889888877632       3799999999987654211   11111122221111      1 1123468999999999


Q ss_pred             HHHHhcCCCCCCceEEec
Q 025702          199 FVQVLGNEKASRQVFNIS  216 (249)
Q Consensus       199 ~~~~~~~~~~~~~~~~i~  216 (249)
                      ++.+++++. .+..||+.
T Consensus       233 ~~~~~~~~~-~~~~~~~~  249 (274)
T PRK07775        233 ITFVAETPR-GAHVVNME  249 (274)
T ss_pred             HHHHhcCCC-CCCeeEEe
Confidence            999998764 34567665

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.70  E-value=3.7e-16  Score=122.34  Aligned_cols=197  Identities=21%  Similarity=0.235  Sum_probs=130.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|++.+.....     ..+...+.++.++.+|+.|.+++.++++..     .+|+
T Consensus        16 tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   90 (255)
T PRK07523         16 TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA-----ESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI   90 (255)
T ss_pred             ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999865421110     111111245788899999999988888642     5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+...+++++    .  +.+++|++||.....           +..+...|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~y  159 (255)
T PRK07523         91 LVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL-----------ARPGIAPY  159 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-----------CCCCCccH
Confidence            999998631                    1223344432    2  457899999865421           12233445


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|...+.+.+       ..+++++.++|+.+.++...... ...+...+.+..+         ...+..++|+|++++
T Consensus       160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  230 (255)
T PRK07523        160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGKVEELVGACV  230 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             88988877653       45899999999999988521110 0111222222222         123567999999999


Q ss_pred             HHhcCCC--CCCceEEecCCcccc
Q 025702          201 QVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      +++....  -.|+.+++.+|..+|
T Consensus       231 ~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        231 FLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHcCchhcCccCcEEEECCCeecc
Confidence            9997532  257889998886554

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.70  E-value=1.9e-16  Score=124.22  Aligned_cols=203  Identities=14%  Similarity=0.120  Sum_probs=129.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-c-cCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.. . ...+.++.+|++|.+++.++++.     .++
T Consensus         8 tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          8 IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVA-----QEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421110     01111 1 13588999999999888877764     268


Q ss_pred             cEEEecCCCCh--------------------hh----hHHHHHhCC--C-CCeEEEeecccc-ccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA--------------------DE----VEPILDALP--N-LEQFIYCSSAGV-YLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~--------------------~~----~~~~~~a~~--~-~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~  125 (249)
                      |+|||+++...                    .+    .+.++..+.  + ..++|++||... ++.            ..
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------------~~  150 (259)
T PRK12384         83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------------KH  150 (259)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------------CC
Confidence            99999987521                    11    223333333  3 358999988542 221            12


Q ss_pred             CCcc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHc--CCCeeecCCCcceEeeeeHHHH
Q 025702          126 KSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ...| .+|...+.++       ...+++++++|||.++++......++.+......  ........+......+++++|+
T Consensus       151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  230 (259)
T PRK12384        151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDV  230 (259)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHH
Confidence            2345 8888766554       2468999999999988765333333322211100  0000011122234567899999


Q ss_pred             HHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +++++.++.+..  ..|+.|++.+|+.
T Consensus       231 ~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        231 LNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             HHHHHHHcCcccccccCceEEEcCCEE
Confidence            999999987543  2578899998764

>PRK06128 oxidoreductase; Provisional

Probab=99.69  E-value=1.5e-15  Score=121.66  Aligned_cols=199  Identities=20%  Similarity=0.254  Sum_probs=130.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++..++......   ......+.....++.++.+|++|.+++.+++++.     ++|+
T Consensus        61 TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  137 (300)
T PRK06128         61 TGADSGIGRATAIAFAREGADIALNYLPEEEQDA---AEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDI  137 (300)
T ss_pred             ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHH---HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999888775432110   0001112222356788999999998888877642     6899


Q ss_pred             EEecCCCCh---------------------hhhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||+++...                     .+...+++++    +...++|++||...|...           .....| 
T Consensus       138 lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~  206 (300)
T PRK06128        138 LVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS-----------PTLLDYA  206 (300)
T ss_pred             EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC-----------CCchhHH
Confidence            999998521                     1223344442    334699999998876321           112235 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      .+|...+.+++       ..++++++++||.+.++.... ..............+         ...+...+|++.++++
T Consensus       207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~~~~  277 (300)
T PRK06128        207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP---------MKRPGQPVEMAPLYVL  277 (300)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC---------CCCCcCHHHHHHHHHH
Confidence            88988877653       358999999999999985321 111122222222211         1235678999999999


Q ss_pred             HhcCCC--CCCceEEecCCcccc
Q 025702          202 VLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      ++....  ..|+.|++.+|..++
T Consensus       278 l~s~~~~~~~G~~~~v~gg~~~~  300 (300)
T PRK06128        278 LASQESSYVTGEVFGVTGGLLLS  300 (300)
T ss_pred             HhCccccCccCcEEeeCCCEeCc
Confidence            987643  258899999887543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=6.1e-16  Score=120.72  Aligned_cols=195  Identities=17%  Similarity=0.202  Sum_probs=126.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEE-ecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|++|+++++.|+++|++|+++ .|+...... .    ...+.....++.++.+|++|++++.+++++.     ++|
T Consensus        10 tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063         10 TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEE-T----AEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-H----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999998774 565433111 0    0111122356888999999999988888742     689


Q ss_pred             EEEecCCCCh--------------------hhhHHHH----HhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~----~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||+++...                    .+...++    .++.  +.++||++||...+.           +..+...
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  153 (250)
T PRK08063         85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR-----------YLENYTT  153 (250)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------CCCCccH
Confidence            9999987521                    1122233    3332  456999999966531           1223345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...|.+.+       ..+++++.++|+.+..+.... .....+........+         ...+++.+|+|+++
T Consensus       154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  224 (250)
T PRK08063        154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRMVEPEDVANAV  224 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCCcCHHHHHHHH
Confidence            5 89998888763       357899999999998764211 000111111111111         12368899999999


Q ss_pred             HHHhcCCC--CCCceEEecCCcc
Q 025702          200 VQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +.+++++.  ..|+.+++.++..
T Consensus       225 ~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        225 LFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHcCchhcCccCCEEEECCCee
Confidence            99997643  2578888888764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=2.3e-15  Score=117.91  Aligned_cols=197  Identities=18%  Similarity=0.256  Sum_probs=127.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|+........    ...+.....++.++.+|++|++++.++++..     .+|+
T Consensus         8 tG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          8 TGGRRGIGLGIARALAAAGFDLAINDRPDDEELAAT----QQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999998754321100    0111111346889999999998887777532     6899


Q ss_pred             EEecCCCCh----------------------hhhHHHHHhC----C---C-----CCeEEEeeccccccCCCCCCCCCCC
Q 025702           76 VYDINGREA----------------------DEVEPILDAL----P---N-----LEQFIYCSSAGVYLKSDLLPHCETD  121 (249)
Q Consensus        76 Vi~~~~~~~----------------------~~~~~~~~a~----~---~-----~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (249)
                      |||+++...                      .+...+++++    .   +     .+++|++||...+...         
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  154 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---------  154 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC---------
Confidence            999987521                      1122333332    1   1     4679999997663211         


Q ss_pred             CCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                        .+...| .+|...|.+++       ..++++++++|+.+.++.... ....+......+ ..       ....+.+++
T Consensus       155 --~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~-~~~~~~~~~~~~-~~-------~~~~~~~~~  223 (256)
T PRK12745        155 --PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP-VTAKYDALIAKG-LV-------PMPRWGEPE  223 (256)
T ss_pred             --CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc-cchhHHhhhhhc-CC-------CcCCCcCHH
Confidence              123345 88988877653       357899999999998875321 111222211111 11       112466899


Q ss_pred             HHHHHHHHHhcCCC--CCCceEEecCCccc
Q 025702          194 DLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      |+++++..++....  ..|+.|++.++...
T Consensus       224 d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        224 DVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            99999999886542  35789999887543

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.69  E-value=3.5e-16  Score=123.93  Aligned_cols=195  Identities=17%  Similarity=0.176  Sum_probs=124.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++........        ....++..+.+|++|.+++.++++..     ++|+
T Consensus        10 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180         10 TGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA--------LHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh--------hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654221100        01246888899999999888877632     5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .++.+++++    ++  +.+++|++||...+..           ..+...|
T Consensus        82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~-----------~~~~~~Y  150 (277)
T PRK06180         82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT-----------MPGIGYY  150 (277)
T ss_pred             EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC-----------CCCcchh
Confidence            999998631                    123334444    33  4568999999765421           1233446


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc------chHHHH---HHHHHcCCCeeecCCCcceEeeeeH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWF---FHRLKAGRPIPIPGSGIQVTQLGHV  192 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~  192 (249)
                       .+|..+|.+.+       ..+++++++||+.+.++....      .....+   ......... .  ..   ...+..+
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~---~~~~~~~  224 (277)
T PRK06180        151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE-A--KS---GKQPGDP  224 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH-h--hc---cCCCCCH
Confidence             88987776553       258999999999997763211      011111   111110000 0  11   1234679


Q ss_pred             HHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          193 KDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      +|++++++.+++.+.. ...| +.+++..+
T Consensus       225 ~dva~~~~~~l~~~~~-~~~~-~~g~~~~~  252 (277)
T PRK06180        225 AKAAQAILAAVESDEP-PLHL-LLGSDALR  252 (277)
T ss_pred             HHHHHHHHHHHcCCCC-CeeE-eccHHHHH
Confidence            9999999999988653 3344 44434333

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8e-16  Score=122.07  Aligned_cols=201  Identities=14%  Similarity=0.115  Sum_probs=128.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|++.........   .........++++.+|++|.+++.. ++.     .++|+
T Consensus         9 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~   84 (280)
T PRK06914          9 TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQ---ATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDL   84 (280)
T ss_pred             ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH---HHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeE
Confidence            79999999999999999999999999986542211000   0000012468899999999988776 542     26899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+...++++    ++  +..++|++||...+..           ..+...|
T Consensus        85 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y  153 (280)
T PRK06914         85 LVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG-----------FPGLSPY  153 (280)
T ss_pred             EEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC-----------CCCCchh
Confidence            999987521                    122223333    44  5678999998644211           1233445


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc------------hHHHHHHHHHcCCCeeecCCCcceEee
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------------VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                       .+|...+.+++       ..+++++++|||.+.++.....            .............     .  .....+
T Consensus       154 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~  226 (280)
T PRK06914        154 VSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI-----N--SGSDTF  226 (280)
T ss_pred             HHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH-----h--hhhhcc
Confidence             88888776653       3589999999999988731100            0001111111000     0  112356


Q ss_pred             eeHHHHHHHHHHHhcCCCCCCceEEecCCccccHH
Q 025702          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (249)
                      ++++|+|++++.+++++.. ...|+++++..+++.
T Consensus       227 ~~~~dva~~~~~~~~~~~~-~~~~~~~~~~~~~~~  260 (280)
T PRK06914        227 GNPIDVANLIVEIAESKRP-KLRYPIGKGVKLMIL  260 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCC-CcccccCCchHHHHH
Confidence            8899999999999998764 357888877666554

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.69  E-value=2.6e-16  Score=115.08  Aligned_cols=150  Identities=19%  Similarity=0.127  Sum_probs=115.3

Q ss_pred             hhhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh--hcCCcEEEeecceeeCC
Q 025702           85 DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--SKGVNWTSLRPVYIYGP  157 (249)
Q Consensus        85 ~~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~--~~~~~~~~~r~~~v~g~  157 (249)
                      ..+..+.+++.    ..+.+|.+|...+|-++....|+|+......++. ..-..-|...+  ....+.+++|.|.|.|.
T Consensus       106 ~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~  185 (315)
T KOG3019|consen  106 RVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGK  185 (315)
T ss_pred             eHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEec
Confidence            34666777765    3568999999999998888888888877766665 33334455443  34578999999999998


Q ss_pred             CCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          158 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      +...-....+.-++..+.++   |++.+.++|||++|++..+..+++++.. .+++|-+.+++++..|+++.+.+.++.+
T Consensus       186 gGGa~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~li~~ale~~~v-~GViNgvAP~~~~n~Ef~q~lg~aL~Rp  261 (315)
T KOG3019|consen  186 GGGALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLVNLIYEALENPSV-KGVINGVAPNPVRNGEFCQQLGSALSRP  261 (315)
T ss_pred             CCcchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHHHHHHHHHhcCCC-CceecccCCCccchHHHHHHHHHHhCCC
Confidence            63222222233355567766   8999999999999999999999999764 4599999999999999999999999865


Q ss_pred             c
Q 025702          238 I  238 (249)
Q Consensus       238 ~  238 (249)
                      .
T Consensus       262 ~  262 (315)
T KOG3019|consen  262 S  262 (315)
T ss_pred             c
Confidence            3

>PRK09186 flagellin modification protein A; Provisional

Probab=99.69  E-value=1.4e-15  Score=119.16  Aligned_cols=199  Identities=15%  Similarity=0.098  Sum_probs=127.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-h-ccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-E-FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|++.......     ..+. . ....+.++.+|+.|++++.++++..     ++
T Consensus        10 tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   84 (256)
T PRK09186         10 TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELL-----ESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI   84 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHH-----HHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence            799999999999999999999999998865421110     0000 0 1234667799999999998888642     38


Q ss_pred             cEEEecCCCCh---------------------------hhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA---------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        74 d~Vi~~~~~~~---------------------------~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      |+|||+++...                           ..++.++.+++  +.+++|++||...+...... ..+..+..
T Consensus        85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-~~~~~~~~  163 (256)
T PRK09186         85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFE-IYEGTSMT  163 (256)
T ss_pred             cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccch-hccccccC
Confidence            99999985310                           01234455554  56799999996654322111 11222222


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      +...| .+|...+.+.+       ..++++++++|+.++++..     ..+........+         ...+++++|+|
T Consensus       164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~~~~~~~~~~~---------~~~~~~~~dva  229 (256)
T PRK09186        164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EAFLNAYKKCCN---------GKGMLDPDDIC  229 (256)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HHHHHHHHhcCC---------ccCCCCHHHhh
Confidence            22235 88988777653       3578999999998876531     111222211111         12468899999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++.+++++..  ..|+.+.+.+|.
T Consensus       230 ~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        230 GTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             hhHhheeccccccccCceEEecCCc
Confidence            99999997543  257777777764

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.5e-16  Score=123.04  Aligned_cols=194  Identities=15%  Similarity=0.177  Sum_probs=126.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|+++|++|+++.|+........     ..+. ....+.++.+|++|++++.++++..     ++|+
T Consensus        11 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138         11 TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVA-----AAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHH-----HHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110     0011 1346889999999999988877642     7999


Q ss_pred             EEecCCCCh--------------------hhh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+.    ..++.+++  +.+++|++||...+..           ......|
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~~Y  153 (252)
T PRK06138         85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG-----------GRGRAAY  153 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC-----------CCCccHH
Confidence            999988521                    112    23444444  5679999999755321           1123345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch----HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                       .+|...+.+++       ..+++++++||++++++......    .+..........        .....+++++|+++
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~a~  225 (252)
T PRK06138        154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRFGTAEEVAQ  225 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCCcCHHHHHH
Confidence             88887776653       23789999999999988421100    001111111100        01123678999999


Q ss_pred             HHHHHhcCCCC--CCceEEecCCc
Q 025702          198 AFVQVLGNEKA--SRQVFNISGEK  219 (249)
Q Consensus       198 ~~~~~~~~~~~--~~~~~~i~~~~  219 (249)
                      ++++++.++..  .|+.+.+.++.
T Consensus       226 ~~~~l~~~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        226 AALFLASDESSFATGTTLVVDGGW  249 (252)
T ss_pred             HHHHHcCchhcCccCCEEEECCCe
Confidence            99999987542  46777776653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=1.3e-15  Score=118.87  Aligned_cols=195  Identities=15%  Similarity=0.159  Sum_probs=128.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|.++++.|+++|++|++++|++.+......     .+.. ..++.++.+|+.|.+++..+++..     ++|+
T Consensus        11 tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231         11 TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA-----EILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999999755321110     1111 245889999999999998887643     6899


Q ss_pred             EEecCCCChh-------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~-------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++....                         .++.+++++.  +.++||++||...+..           ..+...
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~  153 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP-----------RPGLGW  153 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC-----------CCCchH
Confidence            9999885210                         1333444443  5678999999877532           122334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH---HHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|...+.+++       ..+++++.++|+.+.++.......   ........+..         ....+++++|+|+
T Consensus       154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~  224 (251)
T PRK07231        154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI---------PLGRLGTPEDIAN  224 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC---------CCCCCcCHHHHHH
Confidence            5 78877666542       347899999999987764211110   01111111111         1234679999999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCccc
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      +++.++..+.  ..|..+.+.++..+
T Consensus       225 ~~~~l~~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        225 AALFLASDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             HHHHHhCccccCCCCCeEEECCCccC
Confidence            9999997643  24677788776533

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.1e-15  Score=117.52  Aligned_cols=195  Identities=16%  Similarity=0.209  Sum_probs=126.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||+++++.|+++|++|+++.|.......... ............+.++.+|+.|.+++.++++.     .++|.
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   90 (249)
T PRK12827         12 TGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEAD-AVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDI   90 (249)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999998875433211110 00011112235688999999999988887753     26899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC------C-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~------~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                    .+...+++++      + +.+++|++||...+..           ..+...
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~  159 (249)
T PRK12827         91 LVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG-----------NRGQVN  159 (249)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC-----------CCCCch
Confidence            999988532                    1233344442      2 4578999999776422           122334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++++||+.+.++........   .......+.         ..+.+.+|+++++.
T Consensus       160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~---------~~~~~~~~va~~~~  227 (249)
T PRK12827        160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPV---------QRLGEPDEVAALVA  227 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCC---------cCCcCHHHHHHHHH
Confidence            5 88877665542       3479999999999999854332211   112222111         12446899999999


Q ss_pred             HHhcCCC--CCCceEEecCCc
Q 025702          201 QVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (249)
                      .++....  ..|+.+++.++.
T Consensus       228 ~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        228 FLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHcCcccCCccCcEEEeCCCC
Confidence            9886632  247788887653

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.68  E-value=8.3e-16  Score=120.52  Aligned_cols=194  Identities=15%  Similarity=0.154  Sum_probs=125.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++..... +    ..++.....++.++.+|++|.+++.++++..     ++|+
T Consensus        11 tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890         11 SGVGPGLGRTLAVRAARAGADVVLAARTAERLDE-V----AAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H----HHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            7999999999999999999999999998654211 1    1111111346789999999999888777642     6899


Q ss_pred             EEecCCCChh---------------------hhHHHHHhC----C-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD---------------------EVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~~~~~~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++....                     +...+++++    . ...++|++||...+.           +..+...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~~~~~~Y  154 (258)
T PRK07890         86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH-----------SQPKYGAY  154 (258)
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc-----------CCCCcchh
Confidence            9999975210                     123344443    2 345899999876532           11233345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch----------HHHHHHHHHcCCCeeecCCCcceEeeee
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                       .+|...+.+++       ..++++++++|+.++++.....+          .........+..         ....+.+
T Consensus       155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  225 (258)
T PRK07890        155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS---------DLKRLPT  225 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC---------CccccCC
Confidence             88988877653       24799999999999998421100          011111111111         1124678


Q ss_pred             HHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          192 VKDLARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++|++++++.+++..  ...|+.+.+.++.
T Consensus       226 ~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        226 DDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             HHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            899999999988753  2356677676654

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.5e-16  Score=121.14  Aligned_cols=199  Identities=18%  Similarity=0.195  Sum_probs=123.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|++...... .    ....  ..++.++.+|+.|++.+..+++.     .++|+
T Consensus        17 tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~-~----~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (264)
T PRK12829         17 TGGASGIGRAIAEAFAEAGARVHVCDVSEAALAAT-A----ARLP--GAKVTATVADVADPAQVERVFDTAVERFGGLDV   89 (264)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H----HHHh--cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999976542110 0    0000  12568899999999988887764     27999


Q ss_pred             EEecCCCC-h--------------------hhhHHHHHh----CC--CC-CeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGRE-A--------------------DEVEPILDA----LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~-~--------------------~~~~~~~~a----~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |||+++.. .                    .++..++++    +.  +. ++++++||.....           ...+..
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~-----------~~~~~~  158 (264)
T PRK12829         90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL-----------GYPGRT  158 (264)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc-----------CCCCCc
Confidence            99998864 1                    112233333    23  33 5688877754321           111223


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeec---CCCcceEeeeeHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP---GSGIQVTQLGHVKDLA  196 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~D~a  196 (249)
                      .| .+|...|.+++       ..+++++++||+++++++.. ............+. ....   ........+++++|++
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a  236 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR-RVIEARAQQLGIGL-DEMEQEYLEKISLGRMVEPEDIA  236 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH-HHhhhhhhccCCCh-hHHHHHHHhcCCCCCCCCHHHHH
Confidence            35 88888777653       24789999999999998521 11111000000000 0000   0000123589999999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++..++...  ...++.|++.++.
T Consensus       237 ~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        237 ATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             HHHHHHcCccccCccCcEEEeCCCc
Confidence            9999988642  3357889998875

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.67  E-value=2.6e-15  Score=117.11  Aligned_cols=194  Identities=18%  Similarity=0.204  Sum_probs=126.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|+.......     ...+.+...++.++.+|+.|.+++.++++.     .++|+
T Consensus         9 tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         9 TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKV-----AADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999886542111     011112235688999999999988887763     25899


Q ss_pred             EEecCCCCh--------------------hhhHHH----HHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~----~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+...+    ++.++  +..++|++||...+....           ....|
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~-----------~~~~Y  152 (250)
T TIGR03206        84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS-----------GEAVY  152 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC-----------CCchH
Confidence            999997421                    112223    33333  567899999987764321           12235


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-----hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                       .+|...+.+.+       ..++++++++|+.++++.....     ....+........+.         ..+...+|+|
T Consensus       153 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  223 (250)
T TIGR03206       153 AACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL---------GRLGQPDDLP  223 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------cCCcCHHHHH
Confidence             88877666542       2479999999999998741110     000111122222111         1245679999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++..++..+.  ..|+.+++.++.
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       224 GAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             HHHHHHcCcccCCCcCcEEEeCCCc
Confidence            99999887643  257899987764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.1e-15  Score=116.58  Aligned_cols=194  Identities=20%  Similarity=0.186  Sum_probs=122.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||.+++++|+++|++|++..++........    ...+......+.++.+|++|.+++.++++..     .+|+
T Consensus         8 tG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          8 TGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAV----VQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHH----HHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999887765432211100    0111112345778999999999888877632     6899


Q ss_pred             EEecCCCChh---------------------hhHHHHHhCC-----C----CCeEEEeecccc-ccCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD---------------------EVEPILDALP-----N----LEQFIYCSSAGV-YLKSDLLPHCETDTVD  124 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~~~~~~~a~~-----~----~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~  124 (249)
                      |||+++....                     +...+++++.     .    ..++|++||... ++..           .
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~  152 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP-----------G  152 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-----------C
Confidence            9999886311                     1222333321     1    236999998654 3221           1


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ....| .+|...+.+++       ..+++++++||+.++++.......+..........++..         +.+++|++
T Consensus       153 ~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~d~a  223 (248)
T PRK06123        153 EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGR---------GGTAEEVA  223 (248)
T ss_pred             CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCC---------CcCHHHHH
Confidence            11125 88988887653       247999999999999985322212222323333222211         23689999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCC
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~  218 (249)
                      ++++.+++...  ..|+.|++.++
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        224 RAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHhCccccCccCCEEeecCC
Confidence            99999887542  35788988765

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.66  E-value=5.5e-15  Score=117.73  Aligned_cols=196  Identities=19%  Similarity=0.229  Sum_probs=128.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||.++++.|+++|++|+++.|+........    ...+.....++.++.+|+.|.+.+.++++..     ++|+
T Consensus        52 tGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~  127 (290)
T PRK06701         52 TGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANET----KQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDI  127 (290)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHH----HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999998764311110    0111112346788999999999888877642     6899


Q ss_pred             EEecCCCCh---------------------hhhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||+++...                     .+...+++++    +...++|++||...+....           ....| 
T Consensus       128 lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y~  196 (290)
T PRK06701        128 LVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE-----------TLIDYS  196 (290)
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC-----------CcchhH
Confidence            999988521                     1233334442    2335899999988764321           11235 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|...+.+++       ..+++++.++||.++.+.................         .....+.+++|+|++++++
T Consensus       197 ~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l  267 (290)
T PRK06701        197 ATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN---------TPMQRPGQPEELAPAYVFL  267 (290)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhc---------CCcCCCcCHHHHHHHHHHH
Confidence            88887776642       2479999999999988743221111111111111         1123467899999999999


Q ss_pred             hcCCC--CCCceEEecCCcc
Q 025702          203 LGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~  220 (249)
                      +....  ..|..+++.++..
T Consensus       268 l~~~~~~~~G~~i~idgg~~  287 (290)
T PRK06701        268 ASPDSSYITGQMLHVNGGVI  287 (290)
T ss_pred             cCcccCCccCcEEEeCCCcc
Confidence            97642  3578888887653

>PRK06182 short chain dehydrogenase; Validated

Probab=99.66  E-value=3e-15  Score=118.34  Aligned_cols=193  Identities=16%  Similarity=0.134  Sum_probs=123.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|+...... +.          ..+++++.+|++|.+++.++++..     ++|+
T Consensus         9 tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~----------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          9 TGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LA----------SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654211 11          135888999999999888877632     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|....                    +    ++.++..++  +..++|++||...+..           ......|
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  146 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY-----------TPLGAWY  146 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC-----------CCCccHh
Confidence            9999985311                    1    344555554  5679999998654211           1112235


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCe--------eecCCCcceEeeeeHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI--------PIPGSGIQVTQLGHVK  193 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~  193 (249)
                       .+|...+.+.       ...++++++++|+.+.++..... ...+. ....+...        ...........+.+++
T Consensus       147 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (273)
T PRK06182        147 HATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIA-ADHLL-KTSGNGAYAEQAQAVAASMRSTYGSGRLSDPS  224 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhh-hhhhc-ccccccchHHHHHHHHHHHHHhhccccCCCHH
Confidence             8898887653       24589999999999988742100 00000 00000000        0000001123467899


Q ss_pred             HHHHHHHHHhcCCCCCCceEEecCC
Q 025702          194 DLARAFVQVLGNEKASRQVFNISGE  218 (249)
Q Consensus       194 D~a~~~~~~~~~~~~~~~~~~i~~~  218 (249)
                      |+|++++.++..... ...|+++.+
T Consensus       225 ~vA~~i~~~~~~~~~-~~~~~~g~~  248 (273)
T PRK06182        225 VIADAISKAVTARRP-KTRYAVGFG  248 (273)
T ss_pred             HHHHHHHHHHhCCCC-CceeecCcc
Confidence            999999999987542 346765543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.66  E-value=3.8e-15  Score=116.35  Aligned_cols=186  Identities=16%  Similarity=0.132  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|+...   .           ....+.++.+|+.|.+++.+++++     .++|+
T Consensus        14 tGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220         14 TGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---Q-----------EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecchhh---h-----------cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998611   0           034688899999999999888763     25899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .....++++    ++  +..++|++||.....           +..+...|
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~~~~~Y  148 (252)
T PRK08220         80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----------PRIGMAAY  148 (252)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----------CCCCCchh
Confidence            999988521                    112223433    22  446899999865421           22233455


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH----H-----HHHHHHcCCCeeecCCCcceEeeeeH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE----W-----FFHRLKAGRPIPIPGSGIQVTQLGHV  192 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (249)
                       .+|...+.+++       ..++++++++|+.++++.....+..    .     .......         ......++++
T Consensus       149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  219 (252)
T PRK08220        149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKL---------GIPLGKIARP  219 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhh---------cCCCcccCCH
Confidence             88888777652       3578999999999999852110000    0     0011111         1122357889


Q ss_pred             HHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          193 KDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +|+|+++++++...  ...++.+.+.+|..
T Consensus       220 ~dva~~~~~l~~~~~~~~~g~~i~~~gg~~  249 (252)
T PRK08220        220 QEIANAVLFLASDLASHITLQDIVVDGGAT  249 (252)
T ss_pred             HHHHHHHHHHhcchhcCccCcEEEECCCee
Confidence            99999999998753  33577777777643

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.66  E-value=6.2e-15  Score=114.64  Aligned_cols=194  Identities=21%  Similarity=0.272  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|+++|++|+++.|+.......+    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        11 tG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937         11 TGASRGIGAAIARRLAADGFAVAVNYAGSAAAADEL----VAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHH----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999988887654311110    1112222457889999999999888887742     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      |||+++...                    .+...+++++    +...++|++||...+.           +..+...| .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~~~~~~Y~~  155 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL-----------PLPGYGPYAA  155 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-----------CCCCCchhHH
Confidence            999998521                    1122333332    2335899999866531           11223345 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|...+.+++       ..++.++.++|+.+-.+.......+.....+....++         ..+.+++|+++++.+++
T Consensus       156 sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~  226 (245)
T PRK12937        156 SKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPL---------ERLGTPEEIAAAVAFLA  226 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHc
Confidence            8988887663       2478899999998877642111112223333332222         12346799999999998


Q ss_pred             cCCC--CCCceEEecCC
Q 025702          204 GNEK--ASRQVFNISGE  218 (249)
Q Consensus       204 ~~~~--~~~~~~~i~~~  218 (249)
                      +.+.  ..|+.+++.++
T Consensus       227 ~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        227 GPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             CccccCccccEEEeCCC
Confidence            7643  24778887664

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.4e-15  Score=118.03  Aligned_cols=211  Identities=14%  Similarity=0.111  Sum_probs=129.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+........     ..+......+.++.+|++|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   86 (275)
T PRK05876         12 TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-----NHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDV   86 (275)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998865422110     111111345788899999999998887642     5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||++|...                    .+...++++    +.  + ..++|++||...+..           ..+...
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-----------~~~~~~  155 (275)
T PRK05876         87 VFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-----------NAGLGA  155 (275)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-----------CCCCch
Confidence            999998521                    122333433    22  2 468999999776522           123344


Q ss_pred             c-cchHHHHHH----H---hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESV----L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~----~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+    .   ...++++++++|+.+.++...... ................+......++++++|+|++++
T Consensus       156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (275)
T PRK05876        156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE-RIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTA  234 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh-hhcCccccccccccccccccccccCCCHHHHHHHHH
Confidence            5 888764433    2   235899999999998887421110 000000001111112232233467899999999999


Q ss_pred             HHhcCCCCCCceEEecCCccccHHHHHHHHHHHh
Q 025702          201 QVLGNEKASRQVFNISGEKYVTFDGLARACAKVT  234 (249)
Q Consensus       201 ~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~  234 (249)
                      .++.+.    +.+.+.+  +..+..+.+.+.+..
T Consensus       235 ~ai~~~----~~~~~~~--~~~~~~~~~~~~~~~  262 (275)
T PRK05876        235 DAILAN----RLYVLPH--AASRASIRRRFERID  262 (275)
T ss_pred             HHHHcC----CeEEecC--hhhHHHHHHHHHHHH
Confidence            999764    3444443  234444555444444

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.66  E-value=6.6e-15  Score=114.66  Aligned_cols=194  Identities=18%  Similarity=0.188  Sum_probs=125.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|+++|++|+++.+.........    ...+.....++.++.+|+.|++++.++++.     ..+|+
T Consensus        12 tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935         12 TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENL----VNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHH----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999987665432211110    011111234688899999999998888874     25899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+...+++++    .  +..++|++||...+..           ..+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  156 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG-----------GFGQTNY  156 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC-----------CCCCcch
Confidence            999988621                    1223334442    1  3568999998654321           1223345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..++++++++|+.+.++.... ............         .....+.+++|++++++.
T Consensus       157 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~  226 (247)
T PRK12935        157 SAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQKIVAK---------IPKKRFGQADEIAKGVVY  226 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHH
Confidence             88887666542       248899999999998763211 111111111111         112357899999999999


Q ss_pred             HhcCCC-CCCceEEecCCc
Q 025702          202 VLGNEK-ASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~~-~~~~~~~i~~~~  219 (249)
                      +++... ..++.|++.++.
T Consensus       227 ~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        227 LCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HcCcccCccCCEEEeCCCc
Confidence            986542 367899998874

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.66  E-value=3.4e-15  Score=110.05  Aligned_cols=221  Identities=16%  Similarity=0.099  Sum_probs=158.0

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      ||+-|.+|..+++.|... |-+-++++.-..+....+            ..-.++..|+.|...++++.-..+.|++||+
T Consensus        50 TG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~------------~~GPyIy~DILD~K~L~eIVVn~RIdWL~Hf  117 (366)
T KOG2774|consen   50 TGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT------------DVGPYIYLDILDQKSLEEIVVNKRIDWLVHF  117 (366)
T ss_pred             ecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc------------ccCCchhhhhhccccHHHhhcccccceeeeH
Confidence            799999999999999876 655444443222211111            2335678899999999999888899999998


Q ss_pred             CCC---------------ChhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCC-CCCCCCCcc-cchHHHHHHH--
Q 025702           80 NGR---------------EADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-DTVDPKSRH-KGKLNTESVL--  139 (249)
Q Consensus        80 ~~~---------------~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~-~~~~~~~~~-~~k~~~e~~~--  139 (249)
                      ++.               |..+..|+++.+. ..-++...||.++||+......+.+ .-..|...| .+|..+|.+-  
T Consensus       118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy  197 (366)
T KOG2774|consen  118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEY  197 (366)
T ss_pred             HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHH
Confidence            542               4567889999876 3447777899999997554322222 223577777 8898777653  


Q ss_pred             --hhcCCcEEEeecceeeCC---C-CCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC--CCc
Q 025702          140 --ESKGVNWTSLRPVYIYGP---L-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--SRQ  211 (249)
Q Consensus       140 --~~~~~~~~~~r~~~v~g~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~  211 (249)
                        .+.++++-.+|++.++..   + ....+....+..+.+++....+-.++.+.++++.+|+-++++.++..+..  ..+
T Consensus       198 ~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr  277 (366)
T KOG2774|consen  198 FNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRR  277 (366)
T ss_pred             HHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhh
Confidence              567899999999888863   2 22333334444444444445556677888999999999999999987643  457


Q ss_pred             eEEecCCccccHHHHHHHHHHHh
Q 025702          212 VFNISGEKYVTFDGLARACAKVT  234 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~  234 (249)
                      +||+++ ...|-.|+++.+.+++
T Consensus       278 ~ynvt~-~sftpee~~~~~~~~~  299 (366)
T KOG2774|consen  278 TYNVTG-FSFTPEEIADAIRRVM  299 (366)
T ss_pred             eeeece-eccCHHHHHHHHHhhC
Confidence            899876 7799999999999987

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.65  E-value=7.8e-15  Score=114.18  Aligned_cols=193  Identities=20%  Similarity=0.252  Sum_probs=123.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|+++|++|+++.|+..+......    ..+......+.++.+|+.|.+++.++++.     .++|+
T Consensus        11 tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (248)
T PRK05557         11 TGASRGIGRAIAERLAAQGANVVINYASSEAGAEALV----AEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDI   86 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999887653211100    01111135688889999999988887763     26899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeecccc-ccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                    .....+++++    .  +.+++|++||... ++..            ....
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~------------~~~~  154 (248)
T PRK05557         87 LVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP------------GQAN  154 (248)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC------------CCch
Confidence            999987521                    1223334332    2  4568999998643 3221            1233


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+++       ..++++++++|+.+.++... ..............+         ...+.+++|+++++.
T Consensus       155 y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~  224 (248)
T PRK05557        155 YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD-ALPEDVKEAILAQIP---------LGRLGQPEEIASAVA  224 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc-ccChHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            5 78877765442       35789999999988665321 111222222222211         123568899999999


Q ss_pred             HHhcC--CCCCCceEEecCCc
Q 025702          201 QVLGN--EKASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~--~~~~~~~~~i~~~~  219 (249)
                      .++..  ....++.|++.++.
T Consensus       225 ~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        225 FLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HHcCcccCCccccEEEecCCc
Confidence            88865  33367889998764

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.2e-15  Score=117.14  Aligned_cols=189  Identities=17%  Similarity=0.208  Sum_probs=126.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|++|+++++.|+++|++|++++|++..... +        .. ..+..++.+|++|.+.+.++++.. ++|+|||+
T Consensus        15 tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~--------~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060         15 TGASSGIGRACAVALAQRGARVVAAARNAAALDR-L--------AG-ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H--------HH-HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            6999999999999999999999999998654211 0        00 124677889999999888888743 58999999


Q ss_pred             CCCCh--------------------hhhHHHHHhCC-----C--CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           80 NGREA--------------------DEVEPILDALP-----N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        80 ~~~~~--------------------~~~~~~~~a~~-----~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      ++...                    .....+++++.     .  ..++|++||...+...           .+...| .+
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~y~~s  153 (245)
T PRK07060         85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL-----------PDHLAYCAS  153 (245)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC-----------CCCcHhHHH
Confidence            98521                    12233444322     1  3689999997764321           122345 88


Q ss_pred             hHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH-HHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       132 k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      |..+|.+++       ..+++++.+||+.++++.....+.. ..........         ....+++++|+++++..++
T Consensus       154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~a~~~~~l~  224 (245)
T PRK07060        154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI---------PLGRFAEVDDVAAPILFLL  224 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHc
Confidence            988887653       3478999999999998853211100 0111111111         1235789999999999999


Q ss_pred             cCCC--CCCceEEecCCc
Q 025702          204 GNEK--ASRQVFNISGEK  219 (249)
Q Consensus       204 ~~~~--~~~~~~~i~~~~  219 (249)
                      +.+.  ..|+.+++.+|.
T Consensus       225 ~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        225 SDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             CcccCCccCcEEeECCCc
Confidence            7643  257888887764

>PRK06194 hypothetical protein; Provisional

Probab=99.65  E-value=2.6e-15  Score=119.60  Aligned_cols=210  Identities=13%  Similarity=0.138  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+........     ..+.....++.++.+|++|.+++.++++..     .+|+
T Consensus        12 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   86 (287)
T PRK06194         12 TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAV-----AELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHL   86 (287)
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999754421110     111111246788999999999998887632     5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C------CCeEEEeeccccccCCCCCCCCCCCCC
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~------~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (249)
                      |||++|...                    .+..+++++    +.  .      ..++|++||...+...           
T Consensus        87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  155 (287)
T PRK06194         87 LFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-----------  155 (287)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----------
Confidence            999998631                    112222222    22  1      2589999997765321           


Q ss_pred             CCCCcc-cchHHHHHHHhh---------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEe-----
Q 025702          124 DPKSRH-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQ-----  188 (249)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~~---------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  188 (249)
                      .+...| .+|...+.+++.         .++++..+.|+.+..+..          ....+.+..+.+++.+.++     
T Consensus       156 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  225 (287)
T PRK06194        156 PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIW----------QSERNRPADLANTAPPTRSQLIAQ  225 (287)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccc----------cccccCchhcccCccccchhhHHH
Confidence            123346 889888876532         235667777777654321          0001112222222222222     


Q ss_pred             ----------eeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCCccccc
Q 025702          189 ----------LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSV  242 (249)
Q Consensus       189 ----------~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~  242 (249)
                                .++++|+|+.++..+....    .+....  .....++...+....+.+.+.+.
T Consensus       226 ~~~~~~~~~~~~s~~dva~~i~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  283 (287)
T PRK06194        226 AMSQKAVGSGKVTAEEVAQLVFDAIRAGR----FYIYSH--PQALASVRTRMEDIVQQRNPSDP  283 (287)
T ss_pred             HHHHhhhhccCCCHHHHHHHHHHHHHcCC----eEEEcC--HHHHHHHHHHHHHHHHhcCCccc
Confidence                      2577888888888775332    222222  23456666667776665555543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.4e-15  Score=116.86  Aligned_cols=181  Identities=15%  Similarity=0.148  Sum_probs=120.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|++|+++++.|+++ ++|++++|++.+...         +.+..++++++.+|+.|.+.+.++++.. ++|.|||+
T Consensus         9 tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          9 TGASRGIGAAIARELAPT-HTLLLGGRPAERLDE---------LAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH---------HHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            699999999999999999 999999998654211         0101246889999999999999888743 59999999


Q ss_pred             CCCChh------------------------hhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchH
Q 025702           80 NGREAD------------------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (249)
Q Consensus        80 ~~~~~~------------------------~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~  133 (249)
                      ++....                        .+..++++++ ...++|++||...++..           .+...| .+|.
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~-----------~~~~~y~~~K~  147 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRAN-----------PGWGSYAASKF  147 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcC-----------CCCchHHHHHH
Confidence            875211                        1344555555 56789999987765321           122335 7888


Q ss_pred             HHHHHHhh-----cC-CcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC
Q 025702          134 NTESVLES-----KG-VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       134 ~~e~~~~~-----~~-~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (249)
                      ..+.+++.     .. +++..++|+.+.++..     ..+..  ..+..       .....+++++|++++++.+++++.
T Consensus       148 a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~-----~~~~~--~~~~~-------~~~~~~~~~~dva~~~~~~l~~~~  213 (227)
T PRK08219        148 ALRALADALREEEPGNVRVTSVHPGRTDTDMQ-----RGLVA--QEGGE-------YDPERYLRPETVAKAVRFAVDAPP  213 (227)
T ss_pred             HHHHHHHHHHHHhcCCceEEEEecCCccchHh-----hhhhh--hhccc-------cCCCCCCCHHHHHHHHHHHHcCCC
Confidence            77765431     23 7888888887665421     11110  01111       112357999999999999998865


Q ss_pred             CCCceEEecC
Q 025702          208 ASRQVFNISG  217 (249)
Q Consensus       208 ~~~~~~~i~~  217 (249)
                       .+.++++.-
T Consensus       214 -~~~~~~~~~  222 (227)
T PRK08219        214 -DAHITEVVV  222 (227)
T ss_pred             -CCccceEEE
Confidence             355666543

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.4e-15  Score=113.92  Aligned_cols=195  Identities=17%  Similarity=0.194  Sum_probs=128.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|++|+++++.|+++|++|++++|++.......     ..+. ...+++++.+|++|.+++.++++.. ++|++||+
T Consensus         3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAA-----RALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999999999999854421100     0010 1346889999999999999988753 47999999


Q ss_pred             CCCChh--------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHH
Q 025702           80 NGREAD--------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        80 ~~~~~~--------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (249)
                      ++....                    ....++++..  +..++|++||...+..           ..+.+.| .+|...+
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~~~Y~~sK~a~~  145 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP-----------SASGVLQGAINAALE  145 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC-----------CCcchHHHHHHHHHH
Confidence            875211                    1223444322  5679999998877532           1233446 8898888


Q ss_pred             HHHhh-----cCCcEEEeecceeeCCCCCc---chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          137 SVLES-----KGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       137 ~~~~~-----~~~~~~~~r~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      .+.+.     .+++++.++|+.+-.+....   .....+........+.         ..+...+|+|++++.++.....
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~  216 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA---------RRVGQPEDVANAILFLAANGFT  216 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhcCCCc
Confidence            77643     24678888888876653110   0001111122221111         1234679999999999987655


Q ss_pred             CCceEEecCCccc
Q 025702          209 SRQVFNISGEKYV  221 (249)
Q Consensus       209 ~~~~~~i~~~~~~  221 (249)
                      .|+.|++.++..+
T Consensus       217 ~G~~~~v~gg~~~  229 (230)
T PRK07041        217 TGSTVLVDGGHAI  229 (230)
T ss_pred             CCcEEEeCCCeec
Confidence            6889999887653

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3e-14  Score=110.08  Aligned_cols=182  Identities=20%  Similarity=0.231  Sum_probs=121.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----CCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~~~d~V   76 (249)
                      |||+|++|++++++|+++|++|++++|++...                ...+++.+|+.|.+++.++++.    .++|+|
T Consensus         9 tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v   72 (234)
T PRK07577          9 TGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FPGELFACDLADIEQTAATLAQINEIHPVDAI   72 (234)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence            69999999999999999999999999987541                1225678999999887776652    368999


Q ss_pred             EecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           77 YDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        77 i~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      ||+++....                    +    ...++.+++  +.+++|++||...|+..            ....| 
T Consensus        73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~Y~  140 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL------------DRTSYS  140 (234)
T ss_pred             EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC------------CchHHH
Confidence            999885211                    1    222344443  56799999998765331            12345 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc--chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .+|...+.+.+       +.+++++.++||.+..+....  ..............+.         ......+|+|++++
T Consensus       141 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~  211 (234)
T PRK07577        141 AAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM---------RRLGTPEEVAAAIA  211 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC---------CCCcCHHHHHHHHH
Confidence            88887776542       358999999999998774211  1011111111111111         12346899999999


Q ss_pred             HHhcCCC--CCCceEEecCCc
Q 025702          201 QVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (249)
                      .++..+.  ..|+.+.+.++.
T Consensus       212 ~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        212 FLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHhCcccCCccceEEEecCCc
Confidence            9997643  357788887654

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.1e-14  Score=113.46  Aligned_cols=195  Identities=15%  Similarity=0.134  Sum_probs=128.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.+|+++++.|+++|++|++++|++.+.....     ..+.....++.++.+|++|.+++.++++.     .++|+
T Consensus        13 tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939         13 TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELA-----AALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999988765421110     11111134688999999999998888764     26999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+...+++++    .  +..++|++||...+...           .....|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~y  156 (250)
T PRK12939         88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA-----------PKLGAY  156 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC-----------CCcchH
Confidence            999998631                    1122333332    2  34599999996653221           122335


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+++       ..++.++.++||.+..+.........+........         ....+++++|++++++.
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~  227 (250)
T PRK12939        157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGR---------ALERLQVPDDVAGAVLF  227 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcC---------CCCCCCCHHHHHHHHHH
Confidence             88888877653       35789999999998777421110001222222221         12346789999999999


Q ss_pred             HhcCCC--CCCceEEecCCcc
Q 025702          202 VLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++..+.  ..|+.+.+.++..
T Consensus       228 l~~~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        228 LLSDAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             HhCccccCccCcEEEECCCcc
Confidence            997642  3678888888653

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.64  E-value=1.3e-15  Score=124.64  Aligned_cols=233  Identities=15%  Similarity=0.168  Sum_probs=155.9

Q ss_pred             CCCcccchHHHHHHHHHcC---CeEEEEecCCCccccC------CCCCCchhhh----hccCceEEEEeccCCH------
Q 025702            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQ------LPGESDQEFA----EFSSKILHLKGDRKDY------   61 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~------~~~~~~~~~~----~~~~~v~~~~~d~~d~------   61 (249)
                      ||||||+|.-++..|+..-   .+++.+.|.+......      +.+..-..+.    +...++..+.+|+.++      
T Consensus        18 TG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~   97 (467)
T KOG1221|consen   18 TGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGISE   97 (467)
T ss_pred             EcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCCCh
Confidence            7999999999999999863   4899999987764211      1111101111    1236788899999863      


Q ss_pred             HHHHHhhhhCCCcEEEecCCC-------------ChhhhHHHHHhCC---CCCeEEEeeccccccCC---CCCCCCCCC-
Q 025702           62 DFVKSSLSAKGFDVVYDINGR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKS---DLLPHCETD-  121 (249)
Q Consensus        62 ~~l~~~~~~~~~d~Vi~~~~~-------------~~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~---~~~~~~e~~-  121 (249)
                      ..+..+.+  ++++|||+|+.             |..+++++++.|+   +.+-++|+||..+.-..   .+.++.+.. 
T Consensus        98 ~D~~~l~~--eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~  175 (467)
T KOG1221|consen   98 SDLRTLAD--EVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPET  175 (467)
T ss_pred             HHHHHHHh--cCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCcccc
Confidence            44554555  99999999886             4557888888876   78899999998875211   111111111 


Q ss_pred             --------------------------CCCCCCcccchHHHHHHHh--hcCCcEEEeecceeeCCCC--Ccch------HH
Q 025702          122 --------------------------TVDPKSRHKGKLNTESVLE--SKGVNWTSLRPVYIYGPLN--YNPV------EE  165 (249)
Q Consensus       122 --------------------------~~~~~~~~~~k~~~e~~~~--~~~~~~~~~r~~~v~g~~~--~~~~------~~  165 (249)
                                                ..-|..|.-+|+.+|.++.  ..+++.+|+||+.|.+...  ..++      ..
T Consensus       176 ~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~  255 (467)
T KOG1221|consen  176 CNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPD  255 (467)
T ss_pred             CCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCc
Confidence                                      0013444488999999984  3579999999999987431  1111      11


Q ss_pred             HHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC----CC-CCCceEEecCCc--cccHHHHHHHHHHHhC
Q 025702          166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN----EK-ASRQVFNISGEK--YVTFDGLARACAKVTG  235 (249)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~----~~-~~~~~~~i~~~~--~~s~~~l~~~~~~~~g  235 (249)
                      .++....+|.--.+..+.+...++|.+|.++.+++.+.-.    .. ....+||+++++  +++|.++.+...+.+-
T Consensus       256 g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  256 GVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             eEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence            1122223333334556778889999999999999977621    11 224599999976  6999999999998875

>PRK08324 short chain dehydrogenase; Validated

Probab=99.63  E-value=3.2e-15  Score=131.90  Aligned_cols=204  Identities=14%  Similarity=0.111  Sum_probs=132.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.. ..++.++.+|++|.+++.++++..     ++|+
T Consensus       428 TGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~-----~~l~~-~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv  501 (681)
T PRK08324        428 TGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAA-----AELGG-PDRALGVACDVTDEAAVQAAFEEAALAFGGVDI  501 (681)
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-----HHHhc-cCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999875421110     00000 137889999999999888877632     6999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||++|...                    .+...++++    ++  + ..+||++||...+..           ......
T Consensus       502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~-----------~~~~~~  570 (681)
T PRK08324        502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP-----------GPNFGA  570 (681)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC-----------CCCcHH
Confidence            999998421                    123334333    33  3 368999999765421           112334


Q ss_pred             c-cchHHHHHHHhh-------cCCcEEEeecceee-CCCCCcchHHHHHHHHHcCCCe----eecCCCcceEeeeeHHHH
Q 025702          129 H-KGKLNTESVLES-------KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPI----PIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       129 ~-~~k~~~e~~~~~-------~~~~~~~~r~~~v~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~D~  195 (249)
                      | .+|...+.+++.       .++++++++|+.+| +.+....... .......+...    ..+.++.....+++++|+
T Consensus       571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~Dv  649 (681)
T PRK08324        571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWI-EARAAAYGLSEEELEEFYRARNLLKREVTPEDV  649 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhh-hhhhhhccCChHHHHHHHHhcCCcCCccCHHHH
Confidence            5 889888877632       46899999999998 5542221110 00001111110    012333445678999999


Q ss_pred             HHHHHHHhc--CCCCCCceEEecCCcccc
Q 025702          196 ARAFVQVLG--NEKASRQVFNISGEKYVT  222 (249)
Q Consensus       196 a~~~~~~~~--~~~~~~~~~~i~~~~~~s  222 (249)
                      |++++.++.  .....|.++++.+|....
T Consensus       650 A~a~~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        650 AEAVVFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             HHHHHHHhCccccCCcCCEEEECCCchhc
Confidence            999999984  344468899999887543

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.63  E-value=2.3e-14  Score=111.02  Aligned_cols=192  Identities=20%  Similarity=0.260  Sum_probs=123.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      ||++|++|+++++.|+++|++|++++|+..+....+.    ..+......+.++.+|++|.+++.+++++.     .+|.
T Consensus         4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVV----EELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999987632111110    111112345788999999999888887632     5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhCC------CCCeEEEeeccc-cccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~~------~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                    .....+++++.      +.++||++||.. .++..            +...
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~------------~~~~  147 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA------------GQAN  147 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC------------CCch
Confidence            999988631                    11333444432      356899999964 44321            1233


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..++.+++++|+.+.++.. ...............+.         .-+.+++|++++++
T Consensus       148 y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~  217 (239)
T TIGR01830       148 YAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMT-DKLSEKVKKKILSQIPL---------GRFGTPEEVANAVA  217 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhh-hhcChHHHHHHHhcCCc---------CCCcCHHHHHHHHH
Confidence            5 78876665542       3588999999998866531 11111222222222111         12557899999999


Q ss_pred             HHhcCC--CCCCceEEecCC
Q 025702          201 QVLGNE--KASRQVFNISGE  218 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~  218 (249)
                      .++..+  ...++.|++.++
T Consensus       218 ~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       218 FLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHhCcccCCcCCCEEEeCCC
Confidence            988553  236788998765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.63  E-value=5.9e-15  Score=116.03  Aligned_cols=181  Identities=20%  Similarity=0.261  Sum_probs=120.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|++.......     ..+......+.++.+|+.|.+++.++++..     ++|+
T Consensus         7 tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          7 TGASEGIGRALAVRLARAGAQLVLAARNETRLASLA-----QELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865421110     111112356888999999999888877643     6899


Q ss_pred             EEecCCCCh---------------------hhhHHHHHhC----C-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA---------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                     .+..++++++    . +..++|++||...+..           ..+...|
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  150 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG-----------VPTRSGY  150 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC-----------CCCccHH
Confidence            999987521                     1122334442    2 4578999999776532           1223445


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++|+.+..+......     .  ..+....  ..+.....+++++|+|++++.
T Consensus       151 ~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~-----~--~~~~~~~--~~~~~~~~~~~~~dva~~i~~  221 (263)
T PRK06181        151 AASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRAL-----D--GDGKPLG--KSPMQESKIMSAEECAEAILP  221 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhc-----c--ccccccc--cccccccCCCCHHHHHHHHHH
Confidence             88988777653       35789999999998876321100     0  0111111  111222378999999999999


Q ss_pred             HhcCC
Q 025702          202 VLGNE  206 (249)
Q Consensus       202 ~~~~~  206 (249)
                      +++..
T Consensus       222 ~~~~~  226 (263)
T PRK06181        222 AIARR  226 (263)
T ss_pred             HhhCC
Confidence            99864

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.63  E-value=4.6e-14  Score=110.79  Aligned_cols=190  Identities=16%  Similarity=0.179  Sum_probs=125.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||++++++|.++|++|++++|+.....              ..++.++.+|+.|.+++.++++.     .++|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523         15 TGGTKGIGAATVARLLEAGARVVTTARSRPDDL--------------PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             ECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc--------------CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865411              24678899999999888766542     26899


Q ss_pred             EEecCCCCh----------------------hhh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA----------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~----------------------~~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |||++|...                      .+.    +.++..++  +..++|++||...+..          ...+..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----------~~~~~~  150 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP----------LPESTT  150 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC----------CCCCcc
Confidence            999998420                      011    22334443  4568999998765321          011234


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHH-----------HHHHHcC-CCeeecCCCcceE
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF-----------FHRLKAG-RPIPIPGSGIQVT  187 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~~~  187 (249)
                      .| .+|...+.+.+       ..++++++++||.+.++.... ....+           ...+.+. ..+       ...
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~  222 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA-LAERLAEAAGTDYEGAKQIIMDSLGGI-------PLG  222 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH-HHHHHHhhcCCCHHHHHHHHHHHhccC-------ccC
Confidence            46 88988776653       357999999999998874211 11100           0000000 001       112


Q ss_pred             eeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      .+..++|+++++.+++...  ...|+.+.+.+|...|
T Consensus       223 ~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        223 RPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             CCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            2456899999999999763  3357889888876554

>PRK05717 oxidoreductase; Validated

Probab=99.63  E-value=1.4e-14  Score=113.47  Aligned_cols=191  Identities=16%  Similarity=0.128  Sum_probs=123.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+..+....        ..+....+.++.+|++|.+++.+++++.     ++|+
T Consensus        16 tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717         16 TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKV--------AKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH--------HHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999998876442111        0111346888999999998876665432     5899


Q ss_pred             EEecCCCCh----------------------hhhHHHHHhC----C-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA----------------------DEVEPILDAL----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~----------------------~~~~~~~~a~----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                      .++..+++++    . ...++|++||...+...           .....
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~-----------~~~~~  156 (255)
T PRK05717         88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE-----------PDTEA  156 (255)
T ss_pred             EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC-----------CCCcc
Confidence            999998531                      1233455553    2 34689999987653211           11234


Q ss_pred             c-cchHHHHHHHh----h--cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       129 ~-~~k~~~e~~~~----~--~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      | .+|...+.+.+    +  .+++++.++|+.+.++.........+........+         ...+.+++|++.++..
T Consensus       157 Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~  227 (255)
T PRK05717        157 YAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHP---------AGRVGTVEDVAAMVAW  227 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCC---------CCCCcCHHHHHHHHHH
Confidence            5 89988887653    2  25889999999999875221111111111111111         1135678999999999


Q ss_pred             HhcCCC--CCCceEEecCCc
Q 025702          202 VLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++...  ..|+.+.+.++.
T Consensus       228 l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        228 LLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             HcCchhcCccCcEEEECCCc
Confidence            886532  257788887654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.62  E-value=4.8e-14  Score=109.76  Aligned_cols=194  Identities=19%  Similarity=0.239  Sum_probs=119.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEe-cCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      |||+|++|++++++|+++|++|+++. |++......     ...+......+.++.+|+.|++++.++++.     .++|
T Consensus         7 tGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          7 TGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEV-----VNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHH-----HHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            79999999999999999999998754 443321110     011111234688899999999999888763     2578


Q ss_pred             EEEecCCCChh---------------------hhHH----HHHhCC-----CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREAD---------------------EVEP----ILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        75 ~Vi~~~~~~~~---------------------~~~~----~~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      +|||+++....                     +...    ++..+.     +..+||++||...+...          +.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~----------~~  151 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA----------PG  151 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC----------CC
Confidence            99999985210                     0111    122211     23579999997653211          01


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ....| .+|...+.+++       +.+++++++||+.+++|.......+..........++.         -..+++|++
T Consensus       152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva  222 (247)
T PRK09730        152 EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------RGGQPEEVA  222 (247)
T ss_pred             cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            11124 88887776543       35799999999999998532221122222222222211         123689999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCC
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~  218 (249)
                      +++++++....  ..++.+.+.++
T Consensus       223 ~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        223 QAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHHhhcChhhcCccCcEEecCCC
Confidence            99999887542  34667776654

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1e-14  Score=114.35  Aligned_cols=193  Identities=18%  Similarity=0.194  Sum_probs=126.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.+|+++++.|+++|++|++++|++... . .    ...+.....++.++.+|+++.+++..+++.     .++|+
T Consensus        13 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (258)
T PRK08628         13 TGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-E-F----AEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG   86 (258)
T ss_pred             eCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-H-H----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999986542 1 0    111222245788999999999988887764     26899


Q ss_pred             EEecCCCCh-------------------hhhHHHHH----hCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA-------------------DEVEPILD----ALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~-------------------~~~~~~~~----a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      |||++|...                   .....+.+    .++ ...++|++||...+..           ..+...| .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y~~  155 (258)
T PRK08628         87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-----------QGGTSGYAA  155 (258)
T ss_pred             EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC-----------CCCCchhHH
Confidence            999998421                   11112222    233 3468999998765421           1233456 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH------HHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE------WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      +|...+.+++       ..+++++.++|+.++++.... ++.      ..........+.   +     ..++.++|+|+
T Consensus       156 sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~dva~  226 (258)
T PRK08628        156 AKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN-WIATFDDPEAKLAAITAKIPL---G-----HRMTTAEEIAD  226 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH-HhhhccCHHHHHHHHHhcCCc---c-----ccCCCHHHHHH
Confidence            8988887763       347899999999999984211 000      001111111110   0     14677899999


Q ss_pred             HHHHHhcCC--CCCCceEEecCCc
Q 025702          198 AFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++++++...  ...++.+.+.++.
T Consensus       227 ~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        227 TAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHHHHhChhhccccCceEEecCCc
Confidence            999999764  3357778776654

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.2e-14  Score=115.20  Aligned_cols=136  Identities=15%  Similarity=0.233  Sum_probs=100.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC------CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~------~~d   74 (249)
                      |||+|++|+++++.|.++|++|++++|++..... +.          ..+++++.+|++|.+++..+++..      .+|
T Consensus        10 tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-l~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993         10 TGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-LE----------AEGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----------HCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            7999999999999999999999999998655211 11          136788999999998887777632      589


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||+++....                    +    ++.++..++  +..++|++||...+.           +..+...
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~  147 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----------PMKYRGA  147 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----------CCCccch
Confidence            99999875211                    1    455666665  567999999865431           1223344


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCC
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL  158 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~  158 (249)
                      | .+|...+.+.       +..++++++++||.+-.+.
T Consensus       148 Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~  185 (277)
T PRK05993        148 YNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF  185 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence            6 8999888765       3468999999999987763

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.62  E-value=2.6e-14  Score=112.11  Aligned_cols=197  Identities=16%  Similarity=0.197  Sum_probs=127.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||.++++.|+++|++|++++|+..+.....     ..+......+.++.+|++|.+++.++++.     .++|+
T Consensus        18 tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         18 TGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAA-----AHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999999765421100     11111134678899999999998776653     26899


Q ss_pred             EEecCCCC--------------------hhhhHHHHHhC-----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGRE--------------------ADEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~--------------------~~~~~~~~~a~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++..                    ..+...+++++     .  +..++|++||...+.....       ...+...
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-------~~~~~~~  165 (259)
T PRK08213         93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-------EVMDTIA  165 (259)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-------cccCcch
Confidence            99998852                    11233444432     2  4568999999765432211       1123344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...|.+++       ..++++++++|+.+-.+... ...+.+........++.         .+...+|+++++.
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~va~~~~  235 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR-GTLERLGEDLLAHTPLG---------RLGDDEDLKGAAL  235 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh-hhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHH
Confidence            6 88988887653       24788999999988765321 22333333333333222         2334799999999


Q ss_pred             HHhcCC--CCCCceEEecCCc
Q 025702          201 QVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++...  ...|..+++.++.
T Consensus       236 ~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        236 LLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             HHhCccccCccCCEEEECCCe
Confidence            888654  2357788877654

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.62  E-value=5.5e-14  Score=109.96  Aligned_cols=197  Identities=13%  Similarity=0.169  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||++++++|.++|++|++++|+.......+    ...+.....++.++.+|+.|++++.++++.     .++|+
T Consensus        14 tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         14 TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAET----AEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999764321111    011122234678899999999988887763     25799


Q ss_pred             EEecCCCCh--------------------hhh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+++...                    .+.    +.++..+.  +..++|++||...+...         +..+...|
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~~Y  160 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN---------RGLLQAHY  160 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---------CCCCcchH
Confidence            999998521                    112    22333333  45689999986643211         00112345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..++++++++||.+.++..................++         ..+..++|+++++++
T Consensus       161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~  231 (254)
T PRK06114        161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM---------QRMAKVDEMVGPAVF  231 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             88887776542       3578999999999988753211111111122222111         124568999999999


Q ss_pred             HhcCC--CCCCceEEecCCc
Q 025702          202 VLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++...  ...|+++.+.+|.
T Consensus       232 l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        232 LLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HcCccccCcCCceEEECcCE
Confidence            98753  3367788887764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.61  E-value=3.1e-14  Score=110.71  Aligned_cols=196  Identities=17%  Similarity=0.238  Sum_probs=127.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|.++|++|+++.|++......+.    .........+.++.+|+.|.+.+.++++.     ..+|+
T Consensus         8 tG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          8 TGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWF----EEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHH----HHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998542111000    00011134688999999999988887763     25999


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+    .+.+++.++  +..++|++||...+...           .....|
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~Y  152 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ-----------FGQTNY  152 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC-----------CCChHH
Confidence            999987531                    11    222344444  56799999997765321           122345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+++       ..++++++++|+.+.++.... .............++         ..+...+|+++++..
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~  222 (245)
T PRK12824        153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ-MGPEVLQSIVNQIPM---------KRLGTPEEIAAAVAF  222 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-cCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             88876665542       357899999999998874221 111122222222221         224468999999998


Q ss_pred             HhcCCC--CCCceEEecCCccc
Q 025702          202 VLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      ++....  -.|+.+++.++..+
T Consensus       223 l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        223 LVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             HcCccccCccCcEEEECCCeec
Confidence            886532  35889999888654

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.6e-14  Score=111.86  Aligned_cols=192  Identities=15%  Similarity=0.174  Sum_probs=124.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+...... .     ...  ....+..+.+|+.+.+++.++++..     ++|+
T Consensus        21 tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~-~-----~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         21 TGGASGIGHAIAELFAAKGARVALLDRSEDVAEV-A-----AQL--LGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H-----HHh--hCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999997643110 0     000  0235678899999999888877642     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+...++++    +.  +..++|++||......           ......|
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  161 (255)
T PRK06841         93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA-----------LERHVAY  161 (255)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC-----------CCCCchH
Confidence            999998521                    122333333    22  4579999998654211           1112335


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++|+.+..+.....+.........+..+         ...+.+++|++++++.
T Consensus       162 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~  232 (255)
T PRK06841        162 CASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIP---------AGRFAYPEEIAAAALF  232 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence             88887766542       357899999999998774221111111111111111         1246789999999999


Q ss_pred             HhcCCC--CCCceEEecCCcc
Q 025702          202 VLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++..+.  -.|+.+.+.+|..
T Consensus       233 l~~~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        233 LASDAAAMITGENLVIDGGYT  253 (255)
T ss_pred             HcCccccCccCCEEEECCCcc
Confidence            997643  2578888887753

>PRK07985 oxidoreductase; Provisional

Probab=99.61  E-value=3.5e-14  Score=113.33  Aligned_cols=196  Identities=19%  Similarity=0.232  Sum_probs=124.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++..|+......   +............+.++.+|++|.+++.++++..     ++|+
T Consensus        55 TGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  131 (294)
T PRK07985         55 TGGDSGIGRAAAIAYAREGADVAISYLPVEEEDA---QDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDI  131 (294)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhH---HHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999988765432110   0000111112346778899999998887776532     5899


Q ss_pred             EEecCCCCh---------------------hhhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA---------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||+++...                     .+...+++++    +...++|++||...+...           .....| 
T Consensus       132 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~-----------~~~~~Y~  200 (294)
T PRK07985        132 MALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS-----------PHLLDYA  200 (294)
T ss_pred             EEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC-----------CCcchhH
Confidence            999987521                     1122344442    233689999998775321           112235 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      .+|...+.+.+       ..+++++.++|+++.++.... ..............+.         ..+..++|+|+++.+
T Consensus       201 asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~r~~~pedva~~~~f  271 (294)
T PRK07985        201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM---------KRAGQPAELAPVYVY  271 (294)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC---------CCCCCHHHHHHHHHh
Confidence            88988776652       358999999999999985211 1111111122221111         124568999999999


Q ss_pred             HhcCCC--CCCceEEecCCc
Q 025702          202 VLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++....  ..|+.+.+.+|.
T Consensus       272 L~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        272 LASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             hhChhcCCccccEEeeCCCe
Confidence            987643  357888888765

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.61  E-value=9.2e-15  Score=115.39  Aligned_cols=186  Identities=17%  Similarity=0.097  Sum_probs=120.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++.....             ..+++++.+|++|.+++.++++..     .+|+
T Consensus        10 tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179         10 TGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998654211             246889999999999998888742     5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|...                    .+...++++    ++  +.+++|++||...+..           ......|
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  145 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP-----------APYMALY  145 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC-----------CCCccHH
Confidence            999998631                    122233333    33  5789999999765421           1112335


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-----hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                       .+|...+.+.+       ..++++++++|+.+.++.....     ....+.. .... ......  .........+|++
T Consensus       146 ~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~--~~~~~~~~~~~va  221 (270)
T PRK06179        146 AASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDR-ERAV-VSKAVA--KAVKKADAPEVVA  221 (270)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHH-HHHH-HHHHHH--hccccCCCHHHHH
Confidence             88988876643       4689999999999988742111     0000000 0000 000000  0011235679999


Q ss_pred             HHHHHHhcCCCCCCceEEe
Q 025702          197 RAFVQVLGNEKASRQVFNI  215 (249)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~i  215 (249)
                      +.++.++..+.. ...|..
T Consensus       222 ~~~~~~~~~~~~-~~~~~~  239 (270)
T PRK06179        222 DTVVKAALGPWP-KMRYTA  239 (270)
T ss_pred             HHHHHHHcCCCC-CeeEec
Confidence            999999987642 345533

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.61  E-value=4.3e-14  Score=110.85  Aligned_cols=196  Identities=16%  Similarity=0.170  Sum_probs=126.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||+++++.|++.|++|+++.+........+.    ..+......+.++.+|++|.+++.++++.     .++|+
T Consensus        15 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~   90 (258)
T PRK09134         15 TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALA----AEIRALGRRAVALQADLADEAEVRALVARASAALGPITL   90 (258)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988775432111100    11111134688899999999988887763     25899


Q ss_pred             EEecCCCC--------------------hhhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCC-CCc
Q 025702           76 VYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSR  128 (249)
Q Consensus        76 Vi~~~~~~--------------------~~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~  128 (249)
                      |||+++..                    ..+...++++    +.  ...++|+++|...+..            .| ...
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~------------~p~~~~  158 (258)
T PRK09134         91 LVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL------------NPDFLS  158 (258)
T ss_pred             EEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC------------CCCchH
Confidence            99999852                    1122334433    22  2357888877554321            12 224


Q ss_pred             c-cchHHHHHHHhh------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       129 ~-~~k~~~e~~~~~------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      | .+|...|.+.+.      ..++++.++||.+.......  ...+ .........   +      ...+++|+|++++.
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~--~~~~-~~~~~~~~~---~------~~~~~~d~a~~~~~  226 (258)
T PRK09134        159 YTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS--PEDF-ARQHAATPL---G------RGSTPEEIAAAVRY  226 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC--hHHH-HHHHhcCCC---C------CCcCHHHHHHHHHH
Confidence            6 999887766532      23788999999887653211  1111 111111111   1      23668999999999


Q ss_pred             HhcCCCCCCceEEecCCccccHH
Q 025702          202 VLGNEKASRQVFNISGEKYVTFD  224 (249)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~  224 (249)
                      +++.+...++.|++.++..++|.
T Consensus       227 ~~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        227 LLDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             HhcCCCcCCCEEEECCCeecccc
Confidence            99987667889999988866654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.61  E-value=7.7e-15  Score=114.39  Aligned_cols=179  Identities=16%  Similarity=0.092  Sum_probs=117.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|.++++.|+++|++|++++|++.+....        ......++.++.+|+.|.+++.++++..     ++|.
T Consensus         6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQEL--------KDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542111        0111346888999999999888777532     6999


Q ss_pred             EEecCCCCh---------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA---------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||++|...                     .+    ++.++.++.  +.+++|++||...+.           +..+...
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~  146 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAGGNV  146 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------CCCCCch
Confidence            999987521                     01    333455544  567999999876431           1223344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..++.+++++||.+.|+......+..-......     .+.    ...++..+|+|++++
T Consensus       147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~dvA~~~~  217 (248)
T PRK10538        147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK-----TYQ----NTVALTPEDVSEAVW  217 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHh-----hcc----ccCCCCHHHHHHHHH
Confidence            6 88888777652       247899999999998663211000000000000     000    113468999999999


Q ss_pred             HHhcCCC
Q 025702          201 QVLGNEK  207 (249)
Q Consensus       201 ~~~~~~~  207 (249)
                      +++..+.
T Consensus       218 ~l~~~~~  224 (248)
T PRK10538        218 WVATLPA  224 (248)
T ss_pred             HHhcCCC
Confidence            9997654

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.5e-14  Score=111.51  Aligned_cols=189  Identities=21%  Similarity=0.244  Sum_probs=121.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|+......        ...+....+.++.+|+.|.+++..+++.     .++|+
T Consensus        12 tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500         12 TGGTSGIGLETARQFLAEGARVAITGRDPASLEA--------ARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHH--------HHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999987543211        0111134678889999998877666542     26899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----CCCCeEEEeeccc-cccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||+++...                    .++..+++++    +...++|++||.. .++.            .....| 
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~------------~~~~~Y~  151 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM------------PNSSVYA  151 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC------------CCccHHH
Confidence            999988521                    1233455553    2335777777743 3321            123456 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCC-----cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      .+|...|.+++       ..++++++++|+.+++|...     ......+........++.         -+..++|+++
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~  222 (249)
T PRK06500        152 ASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFGTPEEIAK  222 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCcCHHHHHH
Confidence            88988887762       24789999999999987411     111122222232222221         1346899999


Q ss_pred             HHHHHhcCCC--CCCceEEecCC
Q 025702          198 AFVQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (249)
                      ++.+++....  ..|..+.+.++
T Consensus       223 ~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        223 AVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHcCccccCccCCeEEECCC
Confidence            9999887533  24666666665

>PRK06196 oxidoreductase; Provisional

Probab=99.61  E-value=3e-14  Score=114.91  Aligned_cols=220  Identities=19%  Similarity=0.093  Sum_probs=133.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++........        . ..++.++.+|++|.++++++++.     .++|+
T Consensus        32 TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~--------~-l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         32 TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALA--------G-IDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------H-hhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            7999999999999999999999999998654221110        0 12478899999999988877753     36999


Q ss_pred             EEecCCCCh------------------hh----hHHHHHhCC--CCCeEEEeeccccccCC-CCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-  129 (249)
                      |||++|...                  .+    ++.++..++  +..++|++||....... .........+..+...| 
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~  182 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYG  182 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHH
Confidence            999998521                  01    333444444  34799999997543211 10000011122233446 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHH--HHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF--HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .+|...+.+.+       ..++++++++||++.++...........  ....... .++ .     ..+..++|.|..++
T Consensus       183 ~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~a~~~~  255 (315)
T PRK06196        183 QSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG-NPI-D-----PGFKTPAQGAATQV  255 (315)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh-hhh-h-----hhcCCHhHHHHHHH
Confidence            89988776542       3579999999999998853211100000  0000000 000 0     02456899999999


Q ss_pred             HHhcCCCC--CCceEEecC-------------------CccccHHHHHHHHHHHhCC
Q 025702          201 QVLGNEKA--SRQVFNISG-------------------EKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       201 ~~~~~~~~--~~~~~~i~~-------------------~~~~s~~~l~~~~~~~~g~  236 (249)
                      +++..+..  .++.|....                   .+.-...++|++..+.+|.
T Consensus       256 ~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~~  312 (315)
T PRK06196        256 WAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTGV  312 (315)
T ss_pred             HHhcCCccCCCCCeEeCCCcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHCC
Confidence            99976432  344443211                   0123356788888888774

>PRK06398 aldose dehydrogenase; Validated

Probab=99.61  E-value=1.5e-13  Score=107.83  Aligned_cols=187  Identities=15%  Similarity=0.159  Sum_probs=122.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+...                ...+.++.+|++|++++.++++..     ++|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398         12 TGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCccc----------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998644                135788999999999888777642     6999


Q ss_pred             EEecCCCCh--------------------hhhHHH----HHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~----~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|...                    .+...+    +..+.  +..++|++||...+..           ..+...|
T Consensus        76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  144 (258)
T PRK06398         76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-----------TRNAAAY  144 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-----------CCCCchh
Confidence            999988521                    112223    33332  4579999999766422           1233445


Q ss_pred             -cchHHHHHHHhh------cCCcEEEeecceeeCCCCCcc-------hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          130 -KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP-------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       130 -~~k~~~e~~~~~------~~~~~~~~r~~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                       .+|...+.+.+.      ..++++.++||.+-.+.....       -..........      .........+..++|+
T Consensus       145 ~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~ev  218 (258)
T PRK06398        145 VTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKRVGKPEEV  218 (258)
T ss_pred             hhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCCCcCHHHH
Confidence             889888877642      237889999998876531100       00000000000      0000111235678999


Q ss_pred             HHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      |+++++++....  ..|+.+.+.+|..
T Consensus       219 a~~~~~l~s~~~~~~~G~~i~~dgg~~  245 (258)
T PRK06398        219 AYVVAFLASDLASFITGECVTVDGGLR  245 (258)
T ss_pred             HHHHHHHcCcccCCCCCcEEEECCccc
Confidence            999999987542  3677888877753

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.60  E-value=6.2e-14  Score=109.76  Aligned_cols=191  Identities=17%  Similarity=0.208  Sum_probs=125.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|.++|++|+++.|+.......+.          ..++.++.+|++|++++.++++..     ++|+
T Consensus        13 tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463         13 TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----------EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----------hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999988776543221111          125788999999999888877642     6899


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+    ++.++..++  +..++|++||...++..          ......|
T Consensus        83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y  152 (255)
T PRK06463         83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA----------AEGTTFY  152 (255)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC----------CCCccHh
Confidence            999997621                    01    233444444  45799999997765321          1123346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                       .+|...+.+.+       ..+++++.++|+++-.+....    .....+........+         ...+..++|+++
T Consensus       153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~  223 (255)
T PRK06463        153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV---------LKTTGKPEDIAN  223 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC---------cCCCcCHHHHHH
Confidence             88988776653       357899999999886653111    000111111111111         123466899999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCcc
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++++++....  ..|..+.+.+|..
T Consensus       224 ~~~~l~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        224 IVLFLASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             HHHHHcChhhcCCCCCEEEECCCee
Confidence            9999987643  3578888887763

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=6.1e-14  Score=109.59  Aligned_cols=192  Identities=15%  Similarity=0.192  Sum_probs=124.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC------CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~------~~d   74 (249)
                      |||+|+||+++++.|+++|++|+++.++.......+       ......++.++.+|+.|.+++.++++..      .+|
T Consensus        11 tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642         11 TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEAL-------ADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH-------HHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            799999999999999999999998766543211111       0111246888999999999888877642      289


Q ss_pred             EEEecCCCC--------------------------hhhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCC
Q 025702           75 VVYDINGRE--------------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (249)
Q Consensus        75 ~Vi~~~~~~--------------------------~~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (249)
                      ++||+++..                          ..+...++++    +.  +..++|++||....           .+
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------~~  152 (253)
T PRK08642         84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-----------NP  152 (253)
T ss_pred             EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc-----------CC
Confidence            999998641                          0112233333    22  45789999985432           12


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      ..+.+.| .+|...|.+++       ..+++++.++||.+..+...............+..+         ...+.+++|
T Consensus       153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  223 (253)
T PRK08642        153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTP---------LRKVTTPQE  223 (253)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCC---------cCCCCCHHH
Confidence            2334456 99999888764       246889999999887653211111122222222211         123678999


Q ss_pred             HHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++++.+++...  ...|+.+.+.++.
T Consensus       224 va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        224 FADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            999999999753  3468888887764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.59  E-value=1.7e-14  Score=112.57  Aligned_cols=194  Identities=20%  Similarity=0.209  Sum_probs=122.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|++|+++++.|+++|++|++++|++.+....+.    ..+...  ...+..+.+|+.|.+++.++++.     .++
T Consensus         5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFA----AEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH----HHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            7999999999999999999999999998432111110    001000  12345678999999988877753     268


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |+|||+++....                        .++.++.+++  +.+++|++||...+...           ....
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~-----------~~~~  149 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE-----------PDYT  149 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC-----------CCCc
Confidence            999999885210                        2445566655  56799999998765332           1222


Q ss_pred             cc-cchHHHHHHHhh---------cCCcEEEeecceeeCCCCCcch----HHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          128 RH-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       128 ~~-~~k~~~e~~~~~---------~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      .| .+|...+.+.+.         .+++++.++|+.+.++......    .......+.++.+         ...+.+++
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  220 (251)
T PRK07069        150 AYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP---------LGRLGEPD  220 (251)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC---------CCCCcCHH
Confidence            35 888777766531         2478899999999887521110    0011111111111         12345789


Q ss_pred             HHHHHHHHHhcCC--CCCCceEEecCC
Q 025702          194 DLARAFVQVLGNE--KASRQVFNISGE  218 (249)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (249)
                      |++++++.++..+  ...|+.+.+.++
T Consensus       221 ~va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        221 DVAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHHHcCccccCccCCEEEECCC
Confidence            9999999987653  235667766655

>PRK12743 oxidoreductase; Provisional

Probab=99.59  E-value=1.2e-13  Score=108.26  Aligned_cols=195  Identities=15%  Similarity=0.117  Sum_probs=124.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||+++++.|+++|++|+++.++.......+.    ..+......+.++.+|++|.+++++++++     ..+|+
T Consensus         8 tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          8 TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA----EEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999998765443211111    11112235688999999999888777763     25899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC---CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                    .+...++++    +.   +..++|++||....           .+..+...
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~~~~~  152 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPLPGASA  152 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCCCCcch
Confidence            999988521                    112223333    21   13589999986431           12233344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+++       ..+++++.++||.+.++..... ............++         ..+.+.+|+++++.
T Consensus       153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~dva~~~~  222 (256)
T PRK12743        153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDVKPDSRPGIPL---------GRPGDTHEIASLVA  222 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHHHHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence            5 88888776643       3578999999999998742111 11111111111111         12347899999999


Q ss_pred             HHhcCCC--CCCceEEecCCcc
Q 025702          201 QVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      .+++...  ..|..+.+.++..
T Consensus       223 ~l~~~~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        223 WLCSEGASYTTGQSLIVDGGFM  244 (256)
T ss_pred             HHhCccccCcCCcEEEECCCcc
Confidence            9887543  3578888887754

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.59  E-value=7.1e-14  Score=109.42  Aligned_cols=196  Identities=13%  Similarity=0.106  Sum_probs=127.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||.++++.|.++|++|++++|+.......     ..++.....++.++.+|++|.+++.++++.     .++|+
T Consensus        17 tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   91 (255)
T PRK06113         17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHV-----VDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI   91 (255)
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999875542110     011111134678889999999988877653     26899


Q ss_pred             EEecCCCCh-------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA-------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~-------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||+++...                   .+...+++++    .  +..++|++||.....           +..+...| 
T Consensus        92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~Y~  160 (255)
T PRK06113         92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNINMTSYA  160 (255)
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------CCCCcchhH
Confidence            999988521                   1223334442    2  345899999866421           11223345 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|...+.+++       ..+++++++.||.+..+.......+.+.....+..++         ..+..++|+++++.++
T Consensus       161 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l  231 (255)
T PRK06113        161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFL  231 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHH
Confidence            88988887763       2468899999998877642211112222222222111         1245789999999999


Q ss_pred             hcCCC--CCCceEEecCCccc
Q 025702          203 LGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~  221 (249)
                      +....  -.|+.+++.++...
T Consensus       232 ~~~~~~~~~G~~i~~~gg~~~  252 (255)
T PRK06113        232 CSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_pred             cCccccCccCCEEEECCCccc
Confidence            87532  25788998887543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=1.4e-13  Score=107.41  Aligned_cols=192  Identities=15%  Similarity=0.228  Sum_probs=127.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|++.+.....     ..+......+.++.+|+.|.+++.++++.     .++|+
T Consensus        11 tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (253)
T PRK08217         11 TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAV-----AECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG   85 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865421110     11111234678899999998888777764     25899


Q ss_pred             EEecCCCChh-----------------------------hh----HHHHHhCC---CCCeEEEeeccccccCCCCCCCCC
Q 025702           76 VYDINGREAD-----------------------------EV----EPILDALP---NLEQFIYCSSAGVYLKSDLLPHCE  119 (249)
Q Consensus        76 Vi~~~~~~~~-----------------------------~~----~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e  119 (249)
                      |||+++....                             +.    +.++..+.   ...++|++||...++..       
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-------  158 (253)
T PRK08217         86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM-------  158 (253)
T ss_pred             EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC-------
Confidence            9999874210                             01    11222221   23478999987665331       


Q ss_pred             CCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeee
Q 025702          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       120 ~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                           +...| .+|...+.+++       ..+++++.++|+.+.++.... ..+..........+.         ..+.+
T Consensus       159 -----~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~  223 (253)
T PRK08217        159 -----GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEKMIPV---------GRLGE  223 (253)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-cCHHHHHHHHhcCCc---------CCCcC
Confidence                 23345 88988776642       357999999999998875321 222233333222221         23567


Q ss_pred             HHHHHHHHHHHhcCCCCCCceEEecCCc
Q 025702          192 VKDLARAFVQVLGNEKASRQVFNISGEK  219 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~i~~~~  219 (249)
                      ++|+++++..++......|++|++.++-
T Consensus       224 ~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        224 PEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            8999999999997655578899988764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.58  E-value=9.2e-14  Score=108.30  Aligned_cols=192  Identities=15%  Similarity=0.150  Sum_probs=124.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||.+++++|+++|++|++++|+.....       ..........+.++.+|+++.+++..+++.     .++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832        11 TGANTGLGQGIAVGLAEAGADIVGAGRSEPSET-------QQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHH-------HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998652210       111122235688999999999988877753     26999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++...                    .....++++    +.  + ..++|++||...+....           ....
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~~~~  152 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI-----------RVPS  152 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-----------CCch
Confidence            999987521                    112223333    22  2 46899999987664321           1223


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH-HHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.+       ..+++++.++||.+..+....... ..........  +       ....++.++|+|+++
T Consensus       153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~  223 (248)
T TIGR01832       153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER--I-------PAGRWGTPDDIGGPA  223 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc--C-------CCCCCcCHHHHHHHH
Confidence            5 88988777653       247999999999998774211000 0000111111  1       113578899999999


Q ss_pred             HHHhcCCC--CCCceEEecCCc
Q 025702          200 VQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++++....  ..|..+.+.++.
T Consensus       224 ~~l~s~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       224 VFLASSASDYVNGYTLAVDGGW  245 (248)
T ss_pred             HHHcCccccCcCCcEEEeCCCE
Confidence            99997533  246677766653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2.8e-14  Score=111.82  Aligned_cols=188  Identities=14%  Similarity=0.053  Sum_probs=117.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|++|+++++.|+++|++|++++|++..... +.    ........++.++.+|+.|.+.+...+. .++|+|||++
T Consensus         8 tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~vi~~a   81 (257)
T PRK09291          8 TGAGSGFGREVALRLARKGHNVIAGVQIAPQVTA-LR----AEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDVLLNNA   81 (257)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCEEEECC
Confidence            7999999999999999999999999997643211 00    0011113468899999999999988775 3899999998


Q ss_pred             CCCh--------------------h----hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchH
Q 025702           81 GREA--------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (249)
Q Consensus        81 ~~~~--------------------~----~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~  133 (249)
                      +...                    .    .++.++..+.  +.+++|++||...+..           ......| .+|.
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-----------~~~~~~Y~~sK~  150 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT-----------GPFTGAYCASKH  150 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC-----------CCCcchhHHHHH
Confidence            8521                    1    1223344433  5579999998654311           1112345 8898


Q ss_pred             HHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCC-CeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          134 NTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       134 ~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      ..|.+.       +..+++++++||+.+..+... .....+........ .+.. .......+.+..+|+++.++.++..
T Consensus       151 a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        151 ALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND-TMAETPKRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEEecCcccccchh-hhhhhhhhhcchhhHHHhh-hhhhccccCCCHHHHHHHHHHHhcC
Confidence            887654       246899999999987543211 11111111000000 0110 1112233557899999999998876


Q ss_pred             CC
Q 025702          206 EK  207 (249)
Q Consensus       206 ~~  207 (249)
                      +.
T Consensus       229 ~~  230 (257)
T PRK09291        229 DT  230 (257)
T ss_pred             CC
Confidence            54

>PLN02253 xanthoxin dehydrogenase

Probab=99.58  E-value=1.9e-14  Score=114.16  Aligned_cols=199  Identities=16%  Similarity=0.104  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++|+........     ..+ ....++.++.+|++|.+++.++++.     .++|+
T Consensus        24 tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         24 TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVC-----DSL-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHh-cCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999998754321100     001 1124688999999999988887763     26999


Q ss_pred             EEecCCCChh----------------------hhHHHHHh----CC--CCCeEEEeecccc-ccCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD----------------------EVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        76 Vi~~~~~~~~----------------------~~~~~~~a----~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~  126 (249)
                      |||+++....                      +...++++    +.  +..++|++||... ++.           +.+.
T Consensus        98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~~  166 (280)
T PLN02253         98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-----------LGPH  166 (280)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-----------CCCc
Confidence            9999875210                      12223333    21  3457888887554 221           1112


Q ss_pred             CcccchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-----HHHHH----HHHHcCCCeeecCCCcceEeee
Q 025702          127 SRHKGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFF----HRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       127 ~~~~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                      .|..+|...|.+.+       ..++++..++|+.+.++......     ....+    .....+.++        ....+
T Consensus       167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~  238 (280)
T PLN02253        167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL--------KGVEL  238 (280)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC--------cCCCC
Confidence            23389998887763       24789999999999876321100     00011    111111110        11246


Q ss_pred             eHHHHHHHHHHHhcCCC--CCCceEEecCCccccHH
Q 025702          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFD  224 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~~  224 (249)
                      +++|+++++++++....  ..|..+++.+|...+..
T Consensus       239 ~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        239 TVDDVANAVLFLASDEARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             CHHHHHHHHHhhcCcccccccCcEEEECCchhhccc
Confidence            79999999999987542  25788888887654433

>PRK08643 acetoin reductase; Validated

Probab=99.58  E-value=1.1e-13  Score=108.32  Aligned_cols=199  Identities=17%  Similarity=0.262  Sum_probs=123.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||.++++.|+++|++|++++|+........     ..+.....++.++.+|++|++++.++++..     ++|+
T Consensus         8 tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (256)
T PRK08643          8 TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAA-----DKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV   82 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865421110     111111346788999999999888877642     6899


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC---CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++....                    +    ++.+++.++   ...++|++||...+...           .....
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  151 (256)
T PRK08643         83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN-----------PELAV  151 (256)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC-----------CCCch
Confidence            9999975211                    1    122233332   23589999986543111           12234


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHc--CCCeee----cCCCcceEeeeeHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPI----PGSGIQVTQLGHVKD  194 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~i~~~D  194 (249)
                      | .+|...+.+.+       ..+++++.++|+.+.++...     ........  +.+...    .........+...+|
T Consensus       152 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (256)
T PRK08643        152 YSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMF-----DIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPED  226 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhh-----HHHhhhccccCCCchHHHHHHhccCCCCCCcCHHH
Confidence            5 88988776542       35789999999999887311     11111000  000000    000001113457899


Q ss_pred             HHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          195 LARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++++.+++...  ..+|+.+.+.+|..
T Consensus       227 va~~~~~L~~~~~~~~~G~~i~vdgg~~  254 (256)
T PRK08643        227 VANCVSFLAGPDSDYITGQTIIVDGGMV  254 (256)
T ss_pred             HHHHHHHHhCccccCccCcEEEeCCCee
Confidence            999999998754  34678888877653

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.4e-13  Score=107.73  Aligned_cols=195  Identities=15%  Similarity=0.202  Sum_probs=125.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||.++++.|.++|++|++++|++.+....     ..++.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        12 tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (254)
T PRK07478         12 TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQL-----VAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI   86 (254)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999986542211     1122222346888999999999888777632     6899


Q ss_pred             EEecCCCCh----------h---------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA----------D---------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~----------~---------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++...          .               ..+.++..+.  +..++|++||...+..          +......
T Consensus        87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~----------~~~~~~~  156 (254)
T PRK07478         87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA----------GFPGMAA  156 (254)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc----------CCCCcch
Confidence            999998521          0               1222344443  4578999999765421          1112334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.+       ..+++++.++||.+-.+..... ..+..........+         ...+..++|+++++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~  227 (254)
T PRK07478        157 YAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA---------LKRMAQPEEIAQAA  227 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            5 88988776653       3478999999999977632110 00111111111111         12345689999999


Q ss_pred             HHHhcCCC--CCCceEEecCCc
Q 025702          200 VQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++++..+.  ..|+.+.+.++.
T Consensus       228 ~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        228 LFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHHcCchhcCCCCCeEEeCCch
Confidence            99987643  357788877664

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.58  E-value=6.7e-14  Score=109.69  Aligned_cols=193  Identities=16%  Similarity=0.177  Sum_probs=121.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|.++|++|+++.|++.......     ..+.....++.++.+|+.+.+.+.++++..     ++|+
T Consensus        15 tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         15 TGASSGLGARFAQVLAQAGAKVVLASRRVERLKELR-----AEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999865421110     111111346889999999999888877632     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC----------CCCeEEEeeccccccCCCCCCCCCCC
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP----------NLEQFIYCSSAGVYLKSDLLPHCETD  121 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~----------~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (249)
                      |||+++...                    .+...++++    +.          ...++|++||...+..          
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------  159 (258)
T PRK06949         90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV----------  159 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC----------
Confidence            999988421                    011222222    11          1358999998766421          


Q ss_pred             CCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                       ..+...| .+|...+.+++       ..++++++++||+++++.....+.......+.+..+         ...+...+
T Consensus       160 -~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~  229 (258)
T PRK06949        160 -LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLP---------RKRVGKPE  229 (258)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCC---------CCCCcCHH
Confidence             1223345 78877776553       257999999999999885322111111111111111         11344579


Q ss_pred             HHHHHHHHHhcCC--CCCCceEEecCC
Q 025702          194 DLARAFVQVLGNE--KASRQVFNISGE  218 (249)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (249)
                      |+++++.+++...  ...|..+.+.++
T Consensus       230 ~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        230 DLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            9999999998753  235666666554

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.6e-13  Score=106.02  Aligned_cols=190  Identities=16%  Similarity=0.099  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+....   ..          ..++.++.+|+.|.+++.++++..     ++|+
T Consensus        12 tGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856         12 TGGTRGIGAGIARAFLAAGATVVVCGRRAPET---VD----------GRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---hc----------CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986431   00          346888999999999888877632     5799


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC---CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||++|...                    .+...++++    +.   +..++|++||...+..           ......
T Consensus        79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------~~~~~~  147 (252)
T PRK07856         79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP-----------SPGTAA  147 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC-----------CCCCch
Confidence            999987521                    112223333    21   2368999998765321           112334


Q ss_pred             c-cchHHHHHHHhh------cCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~~------~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+++.      ..++++.++|+.+..+...... ............+         ...+..++|++++++
T Consensus       148 Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~va~~~~  218 (252)
T PRK07856        148 YGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP---------LGRLATPADIAWACL  218 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCC---------CCCCcCHHHHHHHHH
Confidence            5 889888877632      2378899999998776321100 0011111111111         123456899999999


Q ss_pred             HHhcCC--CCCCceEEecCCccccH
Q 025702          201 QVLGNE--KASRQVFNISGEKYVTF  223 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~s~  223 (249)
                      +++...  ...|..+.+.+|...+.
T Consensus       219 ~L~~~~~~~i~G~~i~vdgg~~~~~  243 (252)
T PRK07856        219 FLASDLASYVSGANLEVHGGGERPA  243 (252)
T ss_pred             HHcCcccCCccCCEEEECCCcchHH
Confidence            998753  23688888888765443

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.57  E-value=8.6e-14  Score=107.71  Aligned_cols=184  Identities=18%  Similarity=0.190  Sum_probs=119.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|++++++|+++|++|++++|++.......     ..+.. ..+++++.+|+.|.+++...++..     ++|+
T Consensus        12 tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326         12 TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAA-----AELNN-KGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHH-----HHHhc-cCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999865421110     01111 146888999999999888777642     7999


Q ss_pred             EEecCCCChh--------------------hhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREAD--------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||+++....                    +...++++    ++ +.+++|++||...+..           ..+...| 
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~y~  154 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-----------FAGGAAYN  154 (237)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-----------CCCCchHH
Confidence            9999875211                    12223333    32 4568999998765321           1223335 


Q ss_pred             cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|...+.+.       +..+++++.+||+.+.++.....             +    ..  .....+..+|++++++++
T Consensus       155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-------------~----~~--~~~~~~~~~d~a~~~~~~  215 (237)
T PRK07326        155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-------------P----SE--KDAWKIQPEDIAQLVLDL  215 (237)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-------------c----ch--hhhccCCHHHHHHHHHHH
Confidence            7787665544       23588999999999877631100             0    00  001136789999999999


Q ss_pred             hcCCCC-CCceEEecCCcc
Q 025702          203 LGNEKA-SRQVFNISGEKY  220 (249)
Q Consensus       203 ~~~~~~-~~~~~~i~~~~~  220 (249)
                      +..+.. ....+.+..+.+
T Consensus       216 l~~~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        216 LKMPPRTLPSKIEVRPSRP  234 (237)
T ss_pred             HhCCccccccceEEecCCC
Confidence            987643 344555555443

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.57  E-value=1.4e-13  Score=107.67  Aligned_cols=194  Identities=14%  Similarity=0.146  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++|++.......     .++......+.++.+|+.|.+++.++++.     .++|+
T Consensus        15 tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   89 (254)
T PRK08085         15 TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAV-----AKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV   89 (254)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421110     11111124577889999999988887753     25899


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+    .+.++..+.  +..++|++||.....           +..+...|
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~Y  158 (254)
T PRK08085         90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-----------GRDTITPY  158 (254)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc-----------CCCCCcch
Confidence            999998521                    01    122233332  456899999865421           11223345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|...+.+.+       ..+++++.++||++.++...... ...+........+         ...+...+|+++++.
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~  229 (254)
T PRK08085        159 AASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP---------AARWGDPQELIGAAV  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             88988877653       35899999999999887421100 0111222222211         123567899999999


Q ss_pred             HHhcCC--CCCCceEEecCCc
Q 025702          201 QVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++...  .-.|..+.+.+|.
T Consensus       230 ~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        230 FLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HHhCccccCCcCCEEEECCCe
Confidence            998753  3367777777765

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.57  E-value=1e-13  Score=109.92  Aligned_cols=194  Identities=14%  Similarity=0.201  Sum_probs=125.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.+|+++++.|+++|++|++++|+.......     ...+.....++.++.+|+.|.+++..+++.     .++|+
T Consensus        16 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   90 (278)
T PRK08277         16 TGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAV-----VAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI   90 (278)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976432110     011111134678899999999888877653     27999


Q ss_pred             EEecCCCChh------------------------h---------------hHHHHHhCC--CCCeEEEeeccccccCCCC
Q 025702           76 VYDINGREAD------------------------E---------------VEPILDALP--NLEQFIYCSSAGVYLKSDL  114 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~---------------~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~  114 (249)
                      +||+++....                        .               .+.++..+.  +..++|++||...+..   
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~---  167 (278)
T PRK08277         91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP---  167 (278)
T ss_pred             EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC---
Confidence            9999884210                        0               122334443  4578999999876532   


Q ss_pred             CCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch------HHHHHHHHHcCCCeeec
Q 025702          115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIP  180 (249)
Q Consensus       115 ~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~  180 (249)
                              ..+...| .+|...+.+.+       ..+++++.++|+.+.++......      ............+    
T Consensus       168 --------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p----  235 (278)
T PRK08277        168 --------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTP----  235 (278)
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCC----
Confidence                    1223345 88988877653       24789999999999887421100      0011111111111    


Q ss_pred             CCCcceEeeeeHHHHHHHHHHHhcC-C--CCCCceEEecCCc
Q 025702          181 GSGIQVTQLGHVKDLARAFVQVLGN-E--KASRQVFNISGEK  219 (249)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~-~--~~~~~~~~i~~~~  219 (249)
                           ...+...+|+|+++++++.. .  ...|..+.+.+|.
T Consensus       236 -----~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        236 -----MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             -----ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence                 12355689999999998876 3  2367788887764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.57  E-value=8e-14  Score=109.24  Aligned_cols=204  Identities=14%  Similarity=0.120  Sum_probs=121.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||.++++.|+++|++|++++++......... .....+......++++.+|++|.+++.+++++     .++|+
T Consensus        14 tGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   92 (257)
T PRK12744         14 AGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAE-ETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDI   92 (257)
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHH-HHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCE
Confidence            6999999999999999999998888776433211110 00011111234688899999999999888764     26899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||+++...                    .+...++++    ++...++++++|..+....           .....| .
T Consensus        93 li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-----------~~~~~Y~~  161 (257)
T PRK12744         93 AINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-----------PFYSAYAG  161 (257)
T ss_pred             EEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------CCcccchh
Confidence            999998521                    112223333    2223466665433221110           112335 9


Q ss_pred             chHHHHHHHhh-------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~~~-------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|...|.+.+.       .+++++.++||.+.++............. .....   ...+.....+.+++|+++++..++
T Consensus       162 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~dva~~~~~l~  237 (257)
T PRK12744        162 SKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAY-HKTAA---ALSPFSKTGLTDIEDIVPFIRFLV  237 (257)
T ss_pred             hHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhc-ccccc---cccccccCCCCCHHHHHHHHHHhh
Confidence            99988887642       36899999999997763211000000000 00000   011111124778999999999999


Q ss_pred             cCCC-CCCceEEecCCcc
Q 025702          204 GNEK-ASRQVFNISGEKY  220 (249)
Q Consensus       204 ~~~~-~~~~~~~i~~~~~  220 (249)
                      +... ..|+++++.++..
T Consensus       238 ~~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        238 TDGWWITGQTILINGGYT  255 (257)
T ss_pred             cccceeecceEeecCCcc
Confidence            8532 2578898887653

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=1.4e-13  Score=107.06  Aligned_cols=193  Identities=16%  Similarity=0.165  Sum_probs=122.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEE-ecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|++|.++++.|++.|++|+++ +|++.......     ..+......+.++.+|++|.+.+.++++..     ++|
T Consensus        11 ~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (247)
T PRK05565         11 TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELL-----EEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKID   85 (247)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-----HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999999 88754421110     011111346888999999999888877632     699


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||+++...                    .+...++++    +.  +.+++|++||...+...           .....
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~~~~~  154 (247)
T PRK05565         86 ILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA-----------SCEVL  154 (247)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC-----------CCccH
Confidence            9999988631                    112223333    32  45689999986654221           11223


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.++       ...+++++.++|+.+..+..... .+..........         ....+...+|++++++
T Consensus       155 y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~va~~~~  224 (247)
T PRK05565        155 YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSF-SEEDKEGLAEEI---------PLGRLGKPEEIAKVVL  224 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccccc-ChHHHHHHHhcC---------CCCCCCCHHHHHHHHH
Confidence            4 7776655543       23589999999999876532111 111111111110         1123567899999999


Q ss_pred             HHhcCCC--CCCceEEecCCc
Q 025702          201 QVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (249)
                      .++....  ..|+.+++.++.
T Consensus       225 ~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        225 FLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HHcCCccCCccCcEEEecCCc
Confidence            9997643  257777777653

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.56  E-value=4.2e-14  Score=111.82  Aligned_cols=195  Identities=17%  Similarity=0.135  Sum_probs=125.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|++........        . ...+.++.+|++|++++.++++.     .++|+
T Consensus        11 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~--------~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825         11 TGGARGIGLATARALAALGARVAIGDLDEALAKETAA--------E-LGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------H-hccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999997654211100        0 12578889999999988776653     26899


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|....                    +    ++.++..+.  +..++|++||...+..           ......|
T Consensus        82 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  150 (273)
T PRK07825         82 LVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP-----------VPGMATY  150 (273)
T ss_pred             EEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC-----------CCCCcch
Confidence            9999985211                    1    222344443  5678999999765421           1223335


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.       +..++++++++|+.+-.+...             +..      ......+++++|+|++++.
T Consensus       151 ~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------------~~~------~~~~~~~~~~~~va~~~~~  211 (273)
T PRK07825        151 CASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA-------------GTG------GAKGFKNVEPEDVAAAIVG  211 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc-------------ccc------cccCCCCCCHHHHHHHHHH
Confidence             8887665443       346899999999987655210             000      0112246889999999999


Q ss_pred             HhcCCCCCCceEEecC---C----ccccHHHHHHHHHHHhCCC
Q 025702          202 VLGNEKASRQVFNISG---E----KYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       202 ~~~~~~~~~~~~~i~~---~----~~~s~~~l~~~~~~~~g~~  237 (249)
                      ++.++..  ..+ +..   .    ..+.-..+.+.+.+.++..
T Consensus       212 ~l~~~~~--~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  251 (273)
T PRK07825        212 TVAKPRP--EVR-VPRALGPLAQAQRLLPRRVREALNRLLGGD  251 (273)
T ss_pred             HHhCCCC--EEe-ccHHHHHHHHHHHhCcHHHHHHHHHHhccc
Confidence            9988653  111 111   0    1122245666677777654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.56  E-value=2e-13  Score=106.39  Aligned_cols=194  Identities=17%  Similarity=0.161  Sum_probs=117.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+.+++.|+++|++|+++.+++.......    ...+.....++.++.+|+.|.+++.++++..     .+|+
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          8 TGASRGIGRATAVLAAARGWSVGINYARDAAAAEET----ADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999988765433211110    0111122346889999999998887776532     6899


Q ss_pred             EEecCCCChh---------------------hhHHHHHh-CC----C----CCeEEEeeccccc-cCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD---------------------EVEPILDA-LP----N----LEQFIYCSSAGVY-LKSDLLPHCETDTVD  124 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~~~~~~~a-~~----~----~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~  124 (249)
                      |||+++....                     +...++.+ ++    .    ..++|++||...+ +..           .
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------~  152 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP-----------N  152 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-----------C
Confidence            9999985211                     11222222 21    1    2369999986542 211           1


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ....| .+|...+.+.+       ..++++++++||.+..+.....-.+..........+.         .....++|++
T Consensus       153 ~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~e~va  223 (248)
T PRK06947        153 EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPL---------GRAGEADEVA  223 (248)
T ss_pred             CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCC---------CCCcCHHHHH
Confidence            11235 88988775542       3479999999999988742110011111111111111         1135689999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCC
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~  218 (249)
                      +.+++++.++.  ..|+.+.+.++
T Consensus       224 ~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        224 ETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHcCccccCcCCceEeeCCC
Confidence            99999987653  35667766553

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.56  E-value=2e-13  Score=107.07  Aligned_cols=193  Identities=13%  Similarity=0.153  Sum_probs=124.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||.++++.|+++|++|+++.|+. .... +    ..........+.++.+|+.|.+++.+++++.     ++|+
T Consensus        21 tGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~-~----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   94 (258)
T PRK06935         21 TGGNTGLGQGYAVALAKAGADIIITTHGT-NWDE-T----RRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI   94 (258)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHH-H----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999972 2111 1    0111122356889999999999888877643     6899


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+++...                    .+    ++.++..++  +..++|++||...+...           .....|
T Consensus        95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  163 (258)
T PRK06935         95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG-----------KFVPAY  163 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC-----------CCchhh
Confidence            999988521                    01    222334443  45789999997764221           112245


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|...+.+.+       ..+++++.++||.+..+...... ............+         ...+...+|+++++.
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  234 (258)
T PRK06935        164 TASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIP---------AGRWGEPDDLMGAAV  234 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence             88988877653       35789999999998876421000 0011111111111         123566899999999


Q ss_pred             HHhcCCC--CCCceEEecCCc
Q 025702          201 QVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++....  ..|.++.+.+|.
T Consensus       235 ~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        235 FLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HHcChhhcCCCCCEEEECCCe
Confidence            9887532  367788887764

>PRK12742 oxidoreductase; Provisional

Probab=99.56  E-value=2.1e-13  Score=105.56  Aligned_cols=188  Identities=18%  Similarity=0.195  Sum_probs=119.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|.||+++++.|+++|++|+++.|+.....+.+.       .  ..++.++.+|++|.+++.+.++.. ++|++||+
T Consensus        12 tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-------~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   82 (237)
T PRK12742         12 LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA-------Q--ETGATAVQTDSADRDAVIDVVRKSGALDILVVN   82 (237)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH-------H--HhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence            7999999999999999999999887764332111110       0  124677889999998888877643 48999999


Q ss_pred             CCCChh--------------------hhHHH----HHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHH
Q 025702           80 NGREAD--------------------EVEPI----LDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (249)
Q Consensus        80 ~~~~~~--------------------~~~~~----~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (249)
                      ++....                    +...+    +..+++..++|++||....          ..+..+...| .+|..
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~~Y~~sKaa  152 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------RMPVAGMAAYAASKSA  152 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------cCCCCCCcchHHhHHH
Confidence            876311                    11112    2223345689999986531          1122233446 89988


Q ss_pred             HHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC
Q 025702          135 TESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       135 ~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (249)
                      .+.+++       ..+++++.++||.+..+......  ..........++         ..+..++|+++++.+++....
T Consensus       153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~---------~~~~~p~~~a~~~~~l~s~~~  221 (237)
T PRK12742        153 LQGMARGLARDFGPRGITINVVQPGPIDTDANPANG--PMKDMMHSFMAI---------KRHGRPEEVAGMVAWLAGPEA  221 (237)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc--HHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCccc
Confidence            887653       35799999999999876422111  111111111111         124578999999999987643


Q ss_pred             --CCCceEEecCC
Q 025702          208 --ASRQVFNISGE  218 (249)
Q Consensus       208 --~~~~~~~i~~~  218 (249)
                        ..|..+.+.++
T Consensus       222 ~~~~G~~~~~dgg  234 (237)
T PRK12742        222 SFVTGAMHTIDGA  234 (237)
T ss_pred             CcccCCEEEeCCC
Confidence              25777777665

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1e-13  Score=108.83  Aligned_cols=196  Identities=18%  Similarity=0.224  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|.||+++++.|+++|++|++++|++.......     .++..  ....+.++.+|++|++++.++++.     .++
T Consensus        13 tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   87 (260)
T PRK07063         13 TGAAQGIGAAIARAFAREGAAVALADLDAALAERAA-----AAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL   87 (260)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999765421110     11111  134678899999999988887763     269


Q ss_pred             cEEEecCCCCh--------------------hhh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~--------------------~~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |++||++|...                    .+.    +.++..+.  +..++|++||...+..           .....
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  156 (260)
T PRK07063         88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI-----------IPGCF  156 (260)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC-----------CCCch
Confidence            99999998521                    111    22233332  4568999998765321           11223


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-----HHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      .| .+|...+.+.+       ..+++++.++||.+-.+.....+     ............+.         ..+..++|
T Consensus       157 ~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~r~~~~~~  227 (260)
T PRK07063        157 PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM---------KRIGRPEE  227 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC---------CCCCCHHH
Confidence            35 88988777653       34789999999998766311100     00001111111111         12456899


Q ss_pred             HHHHHHHHhcCCC--CCCceEEecCCccc
Q 025702          195 LARAFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      +++++++++....  ..|+.+.+.+|..+
T Consensus       228 va~~~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        228 VAMTAVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             HHHHHHHHcCccccccCCcEEEECCCeee
Confidence            9999999987642  36788888777543

>PRK08017 oxidoreductase; Provisional

Probab=99.56  E-value=6.7e-14  Score=109.58  Aligned_cols=178  Identities=15%  Similarity=0.142  Sum_probs=116.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh------CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~------~~~d   74 (249)
                      |||+|++|+++++.|+++|++|++++|+...... +.          ..+++.+.+|+.|.+++..+++.      ..+|
T Consensus         8 tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~~----------~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          8 TGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-MN----------SLGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-HH----------hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            7999999999999999999999999998654211 11          13578889999998877665542      2578


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      .++|+++....                    +    ...+++++.  +.+++|++||...+..           ......
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~  145 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS-----------TPGRGA  145 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC-----------CCCccH
Confidence            99999885321                    1    122455554  5678999998644211           122334


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...|.+.       ...++++++++|+.+..+..     .. +.......+  ....+...+.+++++|+++++.
T Consensus       146 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~-----~~-~~~~~~~~~--~~~~~~~~~~~~~~~d~a~~~~  217 (256)
T PRK08017        146 YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT-----DN-VNQTQSDKP--VENPGIAARFTLGPEAVVPKLR  217 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh-----hc-ccchhhccc--hhhhHHHhhcCCCHHHHHHHHH
Confidence            5 8898887654       34678999999987755421     00 000001111  1111222345799999999999


Q ss_pred             HHhcCCCC
Q 025702          201 QVLGNEKA  208 (249)
Q Consensus       201 ~~~~~~~~  208 (249)
                      .+++.+..
T Consensus       218 ~~~~~~~~  225 (256)
T PRK08017        218 HALESPKP  225 (256)
T ss_pred             HHHhCCCC
Confidence            99987653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.56  E-value=2.7e-13  Score=105.49  Aligned_cols=194  Identities=19%  Similarity=0.249  Sum_probs=122.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++..+.........    ...+......+..+.+|+.|.+++.+++++     .++|+
T Consensus         9 tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   84 (246)
T PRK12938          9 TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKW----LEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDV   84 (246)
T ss_pred             ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999988664322211000    011111134577789999999988877753     26899


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++....                    +    ++.++..+.  +..++|++||.....           +......|
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~y  153 (246)
T PRK12938         85 LVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-----------GQFGQTNY  153 (246)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC-----------CCCCChhH
Confidence            9999986311                    1    223444443  457999999865421           11233345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++|+.+.++.... ..+..........+         ...+...+|+++++.+
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~  223 (246)
T PRK12938        154 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIP---------VRRLGSPDEIGSIVAW  223 (246)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCC---------ccCCcCHHHHHHHHHH
Confidence             88887665542       357899999999998874211 11222222222221         1234568999999999


Q ss_pred             HhcCC--CCCCceEEecCCc
Q 025702          202 VLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++..+  ...++.+.+.++.
T Consensus       224 l~~~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        224 LASEESGFSTGADFSLNGGL  243 (246)
T ss_pred             HcCcccCCccCcEEEECCcc
Confidence            88654  2367788877653

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.55  E-value=2.5e-13  Score=106.81  Aligned_cols=194  Identities=13%  Similarity=0.132  Sum_probs=122.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||.++++.|+++|++|++++|++..... +    ...+.....++.++.+|+++++++.++++..     ++|+
T Consensus        16 tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~-~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         16 TGAGRGLGAAIALAFAEAGADVLIAARTESQLDE-V----AEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998654211 0    0111112356888999999999988777632     7899


Q ss_pred             EEecCCCC--------------------hhhhHHHHHhC-------CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGRE--------------------ADEVEPILDAL-------PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~--------------------~~~~~~~~~a~-------~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++..                    ..+...+.+++       .+..++|++||.....           +..+...
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~~  159 (263)
T PRK07814         91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------AGRGFAA  159 (263)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------CCCCCch
Confidence            99998742                    11233344443       1346899999854321           1123344


Q ss_pred             c-cchHHHHHHHhh------cCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~~------~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|..++.+.+.      ..++++.++|+.+..+.... .-...+........+         ...+...+|++++++
T Consensus       160 Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~  230 (263)
T PRK07814        160 YGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATP---------LRRLGDPEDIAAAAV  230 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            6 899888877642      24688899998886653110 000111111111111         112456899999999


Q ss_pred             HHhcCC--CCCCceEEecCCc
Q 025702          201 QVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++...  ...++.+.+.++.
T Consensus       231 ~l~~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        231 YLASPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             HHcCccccCcCCCEEEECCCc
Confidence            998753  2356777776653

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.4e-13  Score=108.13  Aligned_cols=197  Identities=12%  Similarity=0.194  Sum_probs=127.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhh----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~----~~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+..+.....     ..+.. ...++.++.+|++|+++++++++.    -++|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~   88 (263)
T PRK08339         14 TASSKGIGFGVARVLARAGADVILLSRNEENLKKAR-----EKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDI   88 (263)
T ss_pred             eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcE
Confidence            799999999999999999999999999865421110     01111 124688999999999988887763    25899


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|....                        .++.++..++  +..++|++||...+..           ......|
T Consensus        89 lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~-----------~~~~~~y  157 (263)
T PRK08339         89 FFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP-----------IPNIALS  157 (263)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC-----------CCcchhh
Confidence            9999885211                        1344455554  4579999999775311           1112335


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch----------HHHHHHHHHcCCCeeecCCCcceEeeee
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                       .+|...+.+.+       ..++++..+.||.+..+......          .........+..         ....+..
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~  228 (263)
T PRK08339        158 NVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPI---------PLGRLGE  228 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccC---------CcccCcC
Confidence             77877766542       35789999999998766210000          001111111111         1123566


Q ss_pred             HHHHHHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          192 VKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      ++|+++++.+++...  ...|+.+.+.+|...|
T Consensus       229 p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        229 PEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            899999999998753  2367888888776554

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=8.4e-14  Score=107.92  Aligned_cols=173  Identities=21%  Similarity=0.223  Sum_probs=115.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|.+++++|+++|++|++++|++.+.....     ..+.....++.++.+|+++.+++.++++..     ++|+
T Consensus        13 tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (239)
T PRK07666         13 TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVA-----EEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI   87 (239)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence            699999999999999999999999999865421110     111112346888999999999988887632     7999


Q ss_pred             EEecCCCChh--------------------hhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++....                    +...++++    +.  +.+++|++||...+..           ..+...|
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y  156 (239)
T PRK07666         88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG-----------AAVTSAY  156 (239)
T ss_pred             EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC-----------CCCCcch
Confidence            9999875321                    11223333    22  4578999998765422           1223345


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.++       ++.+++++++||+.+.++.....           ....   +.   ...++..+|+|++++.
T Consensus       157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-----------~~~~---~~---~~~~~~~~~~a~~~~~  219 (239)
T PRK07666        157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-----------GLTD---GN---PDKVMQPEDLAEFIVA  219 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-----------cccc---cC---CCCCCCHHHHHHHHHH
Confidence             7787766554       23589999999999887732100           0000   11   1235778999999999


Q ss_pred             HhcCC
Q 025702          202 VLGNE  206 (249)
Q Consensus       202 ~~~~~  206 (249)
                      +++.+
T Consensus       220 ~l~~~  224 (239)
T PRK07666        220 QLKLN  224 (239)
T ss_pred             HHhCC
Confidence            99876

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.2e-13  Score=107.11  Aligned_cols=175  Identities=14%  Similarity=0.130  Sum_probs=117.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.+|+++++.|+++|++|++++|++.+... +.    ....+...++.++.+|++|.+++..+++.     .++|+
T Consensus        12 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (241)
T PRK07454         12 TGASSGIGKATALAFAKAGWDLALVARSQDALEA-LA----AELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDV   86 (241)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998654211 10    01111134688899999999988777763     25999


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+    .+.++..+.  +..++|++||...++..           .+...|
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  155 (241)
T PRK07454         87 LINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF-----------PQWGAY  155 (241)
T ss_pred             EEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC-----------CCccHH
Confidence            999998521                    11    122333333  45789999998775321           123345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++++||+.+-.+.....            . ..  . ......++..+|+|+++++
T Consensus       156 ~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~------------~-~~--~-~~~~~~~~~~~~va~~~~~  219 (241)
T PRK07454        156 CVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE------------T-VQ--A-DFDRSAMLSPEQVAQTILH  219 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc------------c-cc--c-ccccccCCCHHHHHHHHHH
Confidence             88887776542       3589999999999877631110            0 00  0 0001235789999999999


Q ss_pred             HhcCCC
Q 025702          202 VLGNEK  207 (249)
Q Consensus       202 ~~~~~~  207 (249)
                      ++.++.
T Consensus       220 l~~~~~  225 (241)
T PRK07454        220 LAQLPP  225 (241)
T ss_pred             HHcCCc
Confidence            998774

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.55  E-value=5.2e-13  Score=103.30  Aligned_cols=187  Identities=13%  Similarity=0.092  Sum_probs=121.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|++.+...        .+.  ..+++++.+|+.|.+++.++++..     ++|+
T Consensus         8 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          8 TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID--------GLR--QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH--------HHH--HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            7999999999999999999999999998654211        111  124778899999998888777642     5899


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--C--CCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||+++....                    .    .+.++..++  +  ..++|++||.....           +.....
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~~~~  146 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK-----------GSDKHI  146 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-----------CCCCCc
Confidence            9999885211                    0    112233333  2  35899998855321           111223


Q ss_pred             cc-cchHHHHHHHhh------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          128 RH-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       128 ~~-~~k~~~e~~~~~------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .| .+|...+.+.+.      .++++..++||.+..+....   ...........++.         -+...+|+++++.
T Consensus       147 ~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~va~~~~  214 (236)
T PRK06483        147 AYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLLK---------IEPGEEEIIDLVD  214 (236)
T ss_pred             cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCccc---------cCCCHHHHHHHHH
Confidence            45 999988877632      25899999999875432111   11111222222211         1235799999999


Q ss_pred             HHhcCCCCCCceEEecCCcc
Q 025702          201 QVLGNEKASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~~~~~~~~~i~~~~~  220 (249)
                      ++++.....|+.+.+.+|..
T Consensus       215 ~l~~~~~~~G~~i~vdgg~~  234 (236)
T PRK06483        215 YLLTSCYVTGRSLPVDGGRH  234 (236)
T ss_pred             HHhcCCCcCCcEEEeCcccc
Confidence            99986656788888877653

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.54  E-value=2.6e-13  Score=106.11  Aligned_cols=194  Identities=16%  Similarity=0.162  Sum_probs=126.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|.++++.|+++|++|++++|++......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        13 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   87 (253)
T PRK06172         13 TGGAAGIGRATALAFAREGAKVVVADRDAAGGEET-----VALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY   87 (253)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            69999999999999999999999999986542111     0112222456889999999999888877632     6799


Q ss_pred             EEecCCCChh---------------------hh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD---------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++....                     ..    +.++..+.  +..++|++||...+...           .....
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~  156 (253)
T PRK06172         88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA-----------PKMSI  156 (253)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----------CCCch
Confidence            9999885210                     01    12233332  45789999997765321           22344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch--HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+       ..++++..+.||.+-.+......  .+..........+.         ..+..++|+++.
T Consensus       157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~~ia~~  227 (253)
T PRK06172        157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV---------GRIGKVEEVASA  227 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC---------CCccCHHHHHHH
Confidence            6 88988776653       24689999999988766321100  01111111111111         124568999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCc
Q 025702          199 FVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++++...  ...|+.+.+.+|.
T Consensus       228 ~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        228 VLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHhCccccCcCCcEEEECCCc
Confidence            99999764  3367888888765

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.54  E-value=6.1e-13  Score=105.02  Aligned_cols=180  Identities=13%  Similarity=0.123  Sum_probs=116.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+........     ..+......+.++.+|+.|.+++.++++.     .++|+
T Consensus         6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETL-----KLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865422111     01111235688899999999888877753     26999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|....                        .++.++..++  +..++|++||...+..           ......|
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~Y  149 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ-----------GPAMSSY  149 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-----------CCCchHH
Confidence            9999885311                        1222344444  4579999998766422           1123345


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcc--hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP--VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                       .+|...+.+.       ...++++++++|+.+.++.....  ..+........          .....+++++|+|+.+
T Consensus       150 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~vA~~i  219 (270)
T PRK05650        150 NVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGK----------LLEKSPITAADIADYI  219 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHH----------HhhcCCCCHHHHHHHH
Confidence             7887755443       23578999999999987742110  00111100000          0012357899999999


Q ss_pred             HHHhcCC
Q 025702          200 VQVLGNE  206 (249)
Q Consensus       200 ~~~~~~~  206 (249)
                      +.++++.
T Consensus       220 ~~~l~~~  226 (270)
T PRK05650        220 YQQVAKG  226 (270)
T ss_pred             HHHHhCC
Confidence            9999864

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.54  E-value=3.6e-13  Score=105.24  Aligned_cols=196  Identities=17%  Similarity=0.219  Sum_probs=120.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----------
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----------   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----------   70 (249)
                      |||+|+||.+++++|.++|++|++..+..........    .++......+..+.+|+.+.+.+..+++.          
T Consensus        10 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g   85 (252)
T PRK12747         10 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV----YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   85 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH----HHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcC
Confidence            7999999999999999999999887543322111000    11111134567788999998766655432          


Q ss_pred             -CCCcEEEecCCCChh--------------------hhHH----HHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           71 -KGFDVVYDINGREAD--------------------EVEP----ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        71 -~~~d~Vi~~~~~~~~--------------------~~~~----~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                       .++|++||++|....                    +...    ++..+++..++|++||...+..           ...
T Consensus        86 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  154 (252)
T PRK12747         86 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----------LPD  154 (252)
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-----------CCC
Confidence             169999999985211                    1222    2333333469999999876422           112


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ...| .+|...+.+.+       ..+++++.+.||.+.++..................        .....+.+++|+++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~  226 (252)
T PRK12747        155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTI--------SAFNRLGEVEDIAD  226 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhc--------CcccCCCCHHHHHH
Confidence            2346 89988887653       35799999999999887421100000011111100        01124677999999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCc
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++.+++....  ..|+.+.+.+|.
T Consensus       227 ~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        227 TAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HHHHHcCccccCcCCcEEEecCCc
Confidence            9999886532  357778777654

>PRK08264 short chain dehydrogenase; Validated

Probab=99.54  E-value=2e-13  Score=105.73  Aligned_cols=160  Identities=17%  Similarity=0.169  Sum_probs=113.3

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~   78 (249)
                      |||+|++|+++++.|+++|+ +|++++|++.+...            ...++.++.+|+.|.+.+.++++.. .+|+|||
T Consensus        12 tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264         12 TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------LGPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            79999999999999999998 99999998765321            1357889999999999998888743 4899999


Q ss_pred             cCCC-C--------------------hhhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           79 INGR-E--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        79 ~~~~-~--------------------~~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +++. .                    ......++++    +.  +..++|++||...+..           ..+...| .
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----------~~~~~~y~~  148 (238)
T PRK08264         80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN-----------FPNLGTYSA  148 (238)
T ss_pred             CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC-----------CCCchHhHH
Confidence            9986 1                    1123334444    22  4678999998776532           1223345 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|...|.+.+       ..+++++++||+.+.++...             +.      .    ...+..+|+++.++..+
T Consensus       149 sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~-------------~~------~----~~~~~~~~~a~~~~~~~  205 (238)
T PRK08264        149 SKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA-------------GL------D----APKASPADVARQILDAL  205 (238)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc-------------cC------C----cCCCCHHHHHHHHHHHH
Confidence            8888876643       24789999999988776210             00      0    01466788888888887


Q ss_pred             cCC
Q 025702          204 GNE  206 (249)
Q Consensus       204 ~~~  206 (249)
                      ...
T Consensus       206 ~~~  208 (238)
T PRK08264        206 EAG  208 (238)
T ss_pred             hCC
Confidence            754

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.54  E-value=2.9e-13  Score=106.40  Aligned_cols=194  Identities=14%  Similarity=0.163  Sum_probs=122.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+... ....     ..+.....++.++.+|+.+.+++.++++..     .+|+
T Consensus        12 tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226         12 TGALQGIGEGIARVFARHGANLILLDISPEI-EKLA-----DELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHH-----HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987532 1100     011111346788999999999888877642     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+...++++    +.  +..++|++||.....          .+......|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------~~~~~~~~Y  155 (263)
T PRK08226         86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM----------VADPGETAY  155 (263)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------cCCCCcchH
Confidence            999998521                    122223333    32  356899998854310          011122345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-------chHHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                       .+|...+.+.+       ..+++++.++||.+.++....       .........+.+..++         ..+..++|
T Consensus       156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~~  226 (263)
T PRK08226        156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL---------RRLADPLE  226 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC---------CCCCCHHH
Confidence             88887776653       247899999999998873110       0011122222222211         12457899


Q ss_pred             HHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++++..++...  ...|+.+.+.++.
T Consensus       227 va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        227 VGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHHHHHcCchhcCCcCceEeECCCc
Confidence            999999988643  3367777777764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=8.9e-13  Score=101.90  Aligned_cols=183  Identities=14%  Similarity=0.162  Sum_probs=118.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|+||+++++.|+++|++|++++|++....              ..++.++.+|+.++  +.++++.. ++|+|||+
T Consensus        11 tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~--~~~~~~~~~~id~lv~~   74 (235)
T PRK06550         11 TGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------------SGNFHFLQLDLSDD--LEPLFDWVPSVDILCNT   74 (235)
T ss_pred             cCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------------CCcEEEEECChHHH--HHHHHHhhCCCCEEEEC
Confidence            799999999999999999999999999764311              24688899999887  44444322 78999999


Q ss_pred             CCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           80 NGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        80 ~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      ++...                     .+...++++    +.  +..++|++||...+...           .....| .+
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s  143 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG-----------GGGAAYTAS  143 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCCcccHHH
Confidence            88420                     112223333    22  34689999987653211           112234 78


Q ss_pred             hHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH-HHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       132 k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      |...+.+.+       ..+++++.++|+++.++.....+. ........+..+         ...+...+|+|+++++++
T Consensus       144 K~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~  214 (235)
T PRK06550        144 KHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEVAELTLFLA  214 (235)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHHHHHHHHHc
Confidence            877666542       357999999999998875322111 111112222211         123567899999999999


Q ss_pred             cCC--CCCCceEEecCCc
Q 025702          204 GNE--KASRQVFNISGEK  219 (249)
Q Consensus       204 ~~~--~~~~~~~~i~~~~  219 (249)
                      ...  ...+..+.+.+|.
T Consensus       215 s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        215 SGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             ChhhccCCCcEEEECCce
Confidence            753  3357777777653

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.54  E-value=2e-13  Score=107.24  Aligned_cols=192  Identities=13%  Similarity=0.179  Sum_probs=122.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+.......        ..+...++.++.+|+.|++++.++++..     .+|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265         12 TGGATLIGAAVARALVAAGARVAIVDIDADNGAAV--------AASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986542111        0111346889999999999888877642     6899


Q ss_pred             EEecCCCCh-------------------hhh----HHHHHhC-CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA-------------------DEV----EPILDAL-PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~-------------------~~~----~~~~~a~-~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||+++...                   .+.    +.++..+ ++..++|++||...+...           .....| .
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~~~Y~a  152 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ-----------TGRWLYPA  152 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----------CCCchhHH
Confidence            999988521                   111    2223333 244689999986653111           112335 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch--HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      +|...+.+.+       ..+++++.++||.+..+......  ...........  .      .....+...+|+|+++.+
T Consensus       153 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~--~------~p~~r~~~p~dva~~~~~  224 (261)
T PRK08265        153 SKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP--F------HLLGRVGDPEEVAQVVAF  224 (261)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc--c------CCCCCccCHHHHHHHHHH
Confidence            8887776653       24789999999988776311000  00000011000  0      011124568999999999


Q ss_pred             HhcCCC--CCCceEEecCCc
Q 025702          202 VLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++...  ..|+.+.+.++.
T Consensus       225 l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        225 LCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             HcCccccCccCcEEEECCCe
Confidence            997532  367788888775

>PRK09242 tropinone reductase; Provisional

Probab=99.54  E-value=4.3e-13  Score=105.09  Aligned_cols=194  Identities=18%  Similarity=0.255  Sum_probs=125.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|.||+++++.|.++|++|++++|+.+.....     ..++...  ..++.++.+|+.+++++.++++.     .++
T Consensus        15 tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   89 (257)
T PRK09242         15 TGASKGIGLAIAREFLGLGADVLIVARDADALAQA-----RDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL   89 (257)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----HHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            69999999999999999999999999986542110     0111111  24688889999999888777753     268


Q ss_pred             cEEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |+|||+++...                    .+...++++    ++  +..++|++||...+...           .+..
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~  158 (257)
T PRK09242         90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----------RSGA  158 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----------CCCc
Confidence            99999998521                    122233333    33  45789999997664321           2233


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      .| .+|...+.+++       ..+++++.++|+.+.++...... ...+.....+..++         .-+...+|++.+
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~  229 (257)
T PRK09242        159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAA  229 (257)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            45 88887776653       35789999999999887532111 11222222222221         123457999999


Q ss_pred             HHHHhcCCC--CCCceEEecCCc
Q 025702          199 FVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +..++....  ..|+.+.+.++.
T Consensus       230 ~~~l~~~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        230 VAFLCMPAASYITGQCIAVDGGF  252 (257)
T ss_pred             HHHHhCcccccccCCEEEECCCe
Confidence            999987542  257778777654

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.3e-13  Score=111.92  Aligned_cols=186  Identities=16%  Similarity=0.177  Sum_probs=122.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+.......     ...+.....++.++.+|++|.++++++++..     ++|+
T Consensus        14 TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~-----~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (334)
T PRK07109         14 TGASAGVGRATARAFARRGAKVVLLARGEEGLEAL-----AAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT   88 (334)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            79999999999999999999999999986542111     1112222356888999999999888876532     6999


Q ss_pred             EEecCCCCh------------------------hhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA------------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~------------------------~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+++...                        ..++.++..+.  +..++|++||...+...           .....|
T Consensus        89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~-----------~~~~~Y  157 (334)
T PRK07109         89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI-----------PLQSAY  157 (334)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC-----------CcchHH
Confidence            999998521                        12334455554  45789999998876321           122345


Q ss_pred             -cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       130 -~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                       .+|...+.+.+         ..++++++++|+.+.+|..     ... .......       ......+..++|+|+++
T Consensus       158 ~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~-----~~~-~~~~~~~-------~~~~~~~~~pe~vA~~i  224 (334)
T PRK07109        158 CAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF-----DWA-RSRLPVE-------PQPVPPIYQPEVVADAI  224 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh-----hhh-hhhcccc-------ccCCCCCCCHHHHHHHH
Confidence             88877665432         2368999999999877631     111 0000000       01122456799999999


Q ss_pred             HHHhcCCCCCCceEEecCC
Q 025702          200 VQVLGNEKASRQVFNISGE  218 (249)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~  218 (249)
                      ++++.++.   +.+.+++.
T Consensus       225 ~~~~~~~~---~~~~vg~~  240 (334)
T PRK07109        225 LYAAEHPR---RELWVGGP  240 (334)
T ss_pred             HHHHhCCC---cEEEeCcH
Confidence            99998863   35556553

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.53  E-value=5.6e-13  Score=104.23  Aligned_cols=194  Identities=18%  Similarity=0.170  Sum_probs=123.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||.++++.|+++|++|++++|+.......     ..++.....++..+.+|++|++++.++++.     .++|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T PRK05867         15 TGASTGIGKRVALAYVEAGAQVAIAARHLDALEKL-----ADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI   89 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999976542111     011111134678889999999988887753     27999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC-C--CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~-~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++...                    .+...+.++    +. +  ..++|++||....-.         ..+.....
T Consensus        90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~~~~~~~~  160 (253)
T PRK05867         90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------NVPQQVSH  160 (253)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------CCCCCccc
Confidence            999988521                    112222333    22 1  357889887653200         00112234


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++.++||.+-.+.... . ...........+.         ..+..++|+|++++
T Consensus       161 Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~-~-~~~~~~~~~~~~~---------~r~~~p~~va~~~~  229 (253)
T PRK05867        161 YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP-Y-TEYQPLWEPKIPL---------GRLGRPEELAGLYL  229 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc-c-hHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            5 88988877653       357899999999997764211 1 1111122222111         12567899999999


Q ss_pred             HHhcCCC--CCCceEEecCCc
Q 025702          201 QVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++....  ..|+.+.+.+|.
T Consensus       230 ~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        230 YLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHcCcccCCcCCCeEEECCCc
Confidence            9997532  367888887764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.53  E-value=5.1e-13  Score=103.65  Aligned_cols=194  Identities=20%  Similarity=0.277  Sum_probs=122.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|+++|++|+++.|........+.    ........++.++.+|+.|++++.++++.     ..+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (242)
T TIGR01829         6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWL----QEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV   81 (242)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence            7999999999999999999999999883222111000    01111134688999999999888877753     25899


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    ..    .+.++..++  +.+++|++||......           ......|
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y  150 (242)
T TIGR01829        82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKG-----------QFGQTNY  150 (242)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC-----------CCCcchh
Confidence            999997521                    11    122344444  5678999998654211           1122335


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+++       ..+++++.++|+.+.++... ...+..........+.         ..+...+|+++++.+
T Consensus       151 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~  220 (242)
T TIGR01829       151 SAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM-AMREDVLNSIVAQIPV---------GRLGRPEEIAAAVAF  220 (242)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc-ccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             78876655432       35789999999999887432 1122222222222221         123457899999988


Q ss_pred             HhcCCC--CCCceEEecCCc
Q 025702          202 VLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++.++.  ..|+.+.+.++.
T Consensus       221 l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       221 LASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HcCchhcCccCCEEEecCCc
Confidence            876532  357888887764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.53  E-value=5.1e-13  Score=104.38  Aligned_cols=193  Identities=13%  Similarity=0.136  Sum_probs=123.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||.++++.|+++|++|++++|+.......     ...+......+.++.+|+.|.+++.++++..     ++|+
T Consensus        14 tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   88 (252)
T PRK07035         14 TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAV-----ADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI   88 (252)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999976542111     0111112345788899999998887776532     5899


Q ss_pred             EEecCCCCh---------------------hhh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA---------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++...                     .+.    +.+++.++  +..++|++||...+.           +..+...
T Consensus        89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~  157 (252)
T PRK07035         89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS-----------PGDFQGI  157 (252)
T ss_pred             EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC-----------CCCCCcc
Confidence            999997421                     012    22333333  457899999865421           1123345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|..++.+++       ..+++++.+.||.+..+...... ............+.         ..+..++|+|+++
T Consensus       158 Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~  228 (252)
T PRK07035        158 YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL---------RRHAEPSEMAGAV  228 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCC---------CCcCCHHHHHHHH
Confidence            6 89998887763       24789999999988765311100 01112222221111         1245689999999


Q ss_pred             HHHhcCCC--CCCceEEecCC
Q 025702          200 VQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~  218 (249)
                      .+++.+..  ..|+.+.+.++
T Consensus       229 ~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        229 LYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHhCccccCccCCEEEeCCC
Confidence            99997643  36777877665

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.53  E-value=8.9e-13  Score=102.96  Aligned_cols=192  Identities=13%  Similarity=0.105  Sum_probs=123.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++|+.....       ...+.....++.++.+|++|++++.++++.     .++|+
T Consensus        14 tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481         14 TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPET-------QAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEecCchHHHH-------HHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999888643211       111222235688899999999999888864     26899


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||++|....                    +    .+.++..+.  + ..++|++||...+....           ....
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~  155 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI-----------RVPS  155 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC-----------CCcc
Confidence            9999985211                    1    122233332  2 36899999977653211           1123


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.+       ..++++..++||.+-.+...... ............+.         ..+..++|+|+++
T Consensus       156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~peeva~~~  226 (251)
T PRK12481        156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA---------SRWGTPDDLAGPA  226 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            5 88988776653       46899999999998766311100 00111111111111         1246789999999


Q ss_pred             HHHhcCC--CCCCceEEecCCc
Q 025702          200 VQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      .+++...  ...|+.+.+.+|.
T Consensus       227 ~~L~s~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        227 IFLSSSASDYVTGYTLAVDGGW  248 (251)
T ss_pred             HHHhCccccCcCCceEEECCCE
Confidence            9999753  2357777777653

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.53  E-value=9.4e-13  Score=103.66  Aligned_cols=194  Identities=16%  Similarity=0.184  Sum_probs=124.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.+|.+++++|+++|++|+++.|++.......     ..+.....++.++.+|++|.+++.++++.     .++|+
T Consensus        16 tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (265)
T PRK07097         16 TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL-----AAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI   90 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999988765422110     11112234688899999999998888764     25899


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|....                    +    .+.++..++  +..++|++||.....           +..+...|
T Consensus        91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y  159 (265)
T PRK07097         91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL-----------GRETVSAY  159 (265)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC-----------CCCCCccH
Confidence            9999986210                    1    122333333  467899999864311           11223445


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-------HHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                       .+|...+.+.+       ..+++++.++||.+.++......       ...+...+....+         ...+...+|
T Consensus       160 ~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d  230 (265)
T PRK07097        160 AAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP---------AARWGDPED  230 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC---------ccCCcCHHH
Confidence             88988777653       35799999999999887421100       0011111111111         113556899


Q ss_pred             HHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          195 LARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +|+.+..++...  ...|+.+.+.++.
T Consensus       231 va~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        231 LAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            999999999763  2357777777764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.53  E-value=4.9e-13  Score=103.94  Aligned_cols=189  Identities=17%  Similarity=0.200  Sum_probs=119.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|++|+++++.|+++|+.|++..|+..+....        ......+++++.+|+.|.+++.+++++     .++|+
T Consensus        12 tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936         12 TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEAL--------AAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999998888875442111        011124688899999999988877653     26899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccc-cCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                    .+...++++    +.  +..++|++||...+ +..            ....
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~  151 (245)
T PRK12936         84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP------------GQAN  151 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC------------CCcc
Confidence            999998521                    112223333    21  45689999996543 221            1122


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.       ...+++++.++|+.+..+.... .............+         ...+.+.+|+++++.
T Consensus       152 Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~ia~~~~  221 (245)
T PRK12936        152 YCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LNDKQKEAIMGAIP---------MKRMGTGAEVASAVA  221 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cChHHHHHHhcCCC---------CCCCcCHHHHHHHHH
Confidence            4 7776555443       2357899999999876653211 11111111111111         122456899999999


Q ss_pred             HHhcCCCC--CCceEEecCCc
Q 025702          201 QVLGNEKA--SRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~~--~~~~~~i~~~~  219 (249)
                      +++.....  .|+.+++.+|.
T Consensus       222 ~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        222 YLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HHcCccccCcCCCEEEECCCc
Confidence            88865432  57889888764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.52  E-value=9.7e-13  Score=101.94  Aligned_cols=192  Identities=15%  Similarity=0.153  Sum_probs=120.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||.++++.|.++|++|++++|........+    ...+.....++.++.+|++|.+++.++++.     ...|.
T Consensus         4 tGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         4 TGASRGIGRAIANRLAADGFEICVHYHSGRSDAESV----VSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999987654321111    111222235688999999999988777653     15799


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC-----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL-----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~-----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++...                    .+...+++++     +  +..++|++||...+...           .....
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~  148 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN-----------RGQVN  148 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC-----------CCCcc
Confidence            999987421                    1233344432     2  44689999986543111           11223


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.       ...+++++.++|+.+.++.... .... .....+..++         ..+...+|+++++.
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~-~~~~~~~~~~---------~~~~~~~~va~~~~  217 (239)
T TIGR01831       149 YSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VEHD-LDEALKTVPM---------NRMGQPAEVASLAG  217 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hhHH-HHHHHhcCCC---------CCCCCHHHHHHHHH
Confidence            4 7887665543       2357999999999998774321 1111 1122221111         12345799999999


Q ss_pred             HHhcCCC--CCCceEEecCC
Q 025702          201 QVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~  218 (249)
                      +++....  ..|....+.++
T Consensus       218 ~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       218 FLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HHcCchhcCccCCEEEecCC
Confidence            9987642  35666666654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.52  E-value=2.2e-13  Score=105.63  Aligned_cols=167  Identities=19%  Similarity=0.157  Sum_probs=113.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC--CCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--~~d~Vi~   78 (249)
                      |||+|++|+++++.|+++|++|++++|++......         .+...++.++.+|++|.+++.++++..  .+|.++|
T Consensus         7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL---------HTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH---------HHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            79999999999999999999999999986442111         111246888999999999999988742  4788898


Q ss_pred             cCCCC--------------------hhhhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchH
Q 025702           79 INGRE--------------------ADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (249)
Q Consensus        79 ~~~~~--------------------~~~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~  133 (249)
                      +++..                    ..+..++++++    ++..++|++||....-           +......| .+|.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~Y~asK~  146 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL-----------ALPRAEAYGASKA  146 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc-----------CCCCCchhhHHHH
Confidence            88631                    11233344442    2345789988854321           11122235 8898


Q ss_pred             HHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          134 NTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       134 ~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                      ..+.+.+       ..++++++++|+.++++.....             ...       ....+..+|+++.++..++..
T Consensus       147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-------------~~~-------~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-------------TFA-------MPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-------------CCC-------CCcccCHHHHHHHHHHHHhcC
Confidence            8877653       4589999999999998742110             000       012367899999999999885


Q ss_pred             C
Q 025702          207 K  207 (249)
Q Consensus       207 ~  207 (249)
                      .
T Consensus       207 ~  207 (240)
T PRK06101        207 K  207 (240)
T ss_pred             C
Confidence            4

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.52  E-value=2.8e-13  Score=106.02  Aligned_cols=191  Identities=17%  Similarity=0.174  Sum_probs=118.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||.+++++|+++|++|++++|+........        .  ..+..++.+|++|+++++++++.     .++|+
T Consensus        13 tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~--------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057         13 TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAA--------D--EVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------H--HcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999765421100        0  01235788999999998888864     26899


Q ss_pred             EEecCCCChh----------------------h----hHHHHHhCC--CCCeEEEeeccc-cccCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        76 Vi~~~~~~~~----------------------~----~~~~~~a~~--~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~  126 (249)
                      |||+++....                      +    ++.++..+.  +..++|++||.. +++..           .+.
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~-----------~~~  151 (255)
T PRK06057         83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA-----------TSQ  151 (255)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC-----------CCC
Confidence            9999875210                      0    112333332  456899988853 44321           112


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      ..| .+|...+.+.+       ..+++++.++||++.++.....+. .......+ .....+     ...+..++|++++
T Consensus       152 ~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~~~-~~~~~~-----~~~~~~~~~~a~~  224 (255)
T PRK06057        152 ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFA-KDPERAAR-RLVHVP-----MGRFAEPEEIAAA  224 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhcc-CCHHHHHH-HHhcCC-----CCCCcCHHHHHHH
Confidence            235 88865554432       357999999999998874211110 00000000 000111     1146789999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCc
Q 025702          199 FVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +..++...  ...++.+.+.++.
T Consensus       225 ~~~l~~~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        225 VAFLASDDASFITASTFLVDGGI  247 (255)
T ss_pred             HHHHhCccccCccCcEEEECCCe
Confidence            99888653  2346777777654

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.52  E-value=2.3e-13  Score=100.00  Aligned_cols=198  Identities=19%  Similarity=0.248  Sum_probs=133.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      .|+.||.|+++++.....++.|-++.|+..+.....          +...+.++.+|....+-+...+.  ++..++.+.
T Consensus        58 lggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~s----------w~~~vswh~gnsfssn~~k~~l~--g~t~v~e~~  125 (283)
T KOG4288|consen   58 LGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSS----------WPTYVSWHRGNSFSSNPNKLKLS--GPTFVYEMM  125 (283)
T ss_pred             hcCCCcchHHHHHHHHhhceeeeEeecccCcchhhC----------CCcccchhhccccccCcchhhhc--CCcccHHHh
Confidence            489999999999999999999999999987632211          13577777887766554555565  888888876


Q ss_pred             CCC----------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHH-hhcCCcEE
Q 025702           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWT  147 (249)
Q Consensus        81 ~~~----------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~-~~~~~~~~  147 (249)
                      +..          .....+.++++.  ++++|+|+|-.. ||         -.+..|..|+.+|+++|.-+ ...+++.+
T Consensus       126 ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~---------~~~~i~rGY~~gKR~AE~Ell~~~~~rgi  195 (283)
T KOG4288|consen  126 GGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FG---------LPPLIPRGYIEGKREAEAELLKKFRFRGI  195 (283)
T ss_pred             cCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cC---------CCCccchhhhccchHHHHHHHHhcCCCce
Confidence            642          122233344443  899999999532 21         12445667779999999766 55778999


Q ss_pred             EeecceeeCCCCCcc------hHHHHHHHHHcCC-----CeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEec
Q 025702          148 SLRPVYIYGPLNYNP------VEEWFFHRLKAGR-----PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (249)
Q Consensus       148 ~~r~~~v~g~~~~~~------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~  216 (249)
                      ++|||++||.....+      .+...+.+..+..     .+++.  +....+++.++++|.+.+.++++|.-.       
T Consensus       196 ilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~aal~ai~dp~f~-------  266 (283)
T KOG4288|consen  196 ILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVALAALKAIEDPDFK-------  266 (283)
T ss_pred             eeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHHHHHHhccCCCcC-------
Confidence            999999999753222      1222222222221     23333  446678999999999999999998643       


Q ss_pred             CCccccHHHHHHHHH
Q 025702          217 GEKYVTFDGLARACA  231 (249)
Q Consensus       217 ~~~~~s~~~l~~~~~  231 (249)
                        .++++.++.++-.
T Consensus       267 --Gvv~i~eI~~~a~  279 (283)
T KOG4288|consen  267 --GVVTIEEIKKAAH  279 (283)
T ss_pred             --ceeeHHHHHHHHH
Confidence              2355566655544

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1e-12  Score=102.66  Aligned_cols=195  Identities=15%  Similarity=0.186  Sum_probs=122.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.+|+++++.|+++|++|++++|+.......     ...+......+.++.+|++|++++.++++..     .+|+
T Consensus         7 tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          7 TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEA-----KLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            79999999999999999999999999986542111     0111112357889999999999888877642     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC-----C-C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL-----P-N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~-----~-~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                    .+...+++++     . + ..++|++||...+...          .....|
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~Y  151 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG----------PGVIHS  151 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC----------CCCcch
Confidence            999987421                    1122233332     2 2 3689999986542111          111223


Q ss_pred             ccchHHHHHHHh--------hcCCcEEEeecceeeCCCCCcch--HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 HKGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~~~k~~~e~~~~--------~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      ..+|...+.+.+        ..+++++.++||.+.++......  .........+..++         ..+...+|++++
T Consensus       152 ~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~  222 (252)
T PRK07677        152 AAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL---------GRLGTPEEIAGL  222 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC---------CCCCCHHHHHHH
Confidence            378877665542        24789999999998854311111  11222222222111         124568999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCc
Q 025702          199 FVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +.+++...  ...|+.+.+.++.
T Consensus       223 ~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        223 AYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHcCccccccCCCEEEECCCe
Confidence            99988753  2367778887764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.51  E-value=8.5e-13  Score=103.35  Aligned_cols=194  Identities=15%  Similarity=0.177  Sum_probs=125.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|+++.|++......     ...+.....++.++.+|++|++.+.++++..     ++|+
T Consensus        17 tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         17 TGSARGLGFEIARALAGAGAHVLVNGRNAATLEAA-----VAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            69999999999999999999999999986442110     0111122346889999999999888777632     5799


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++....                    +    .+.+++.+.  +..++|++||...+...           .....|
T Consensus        92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~~Y  160 (256)
T PRK06124         92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR-----------AGDAVY  160 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-----------CCccHh
Confidence            9999885211                    1    222334443  56789999987653111           112345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|...+.+.+       ..+++++.++|+.+.++...... ...+........+         ...+++++|++++++
T Consensus       161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~  231 (256)
T PRK06124        161 PAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTP---------LGRWGRPEEIAGAAV  231 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence             77877766542       24789999999999987521111 1111222222111         123678999999999


Q ss_pred             HHhcCCC--CCCceEEecCCc
Q 025702          201 QVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (249)
                      .++....  -.|+.+.+.++.
T Consensus       232 ~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        232 FLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HHcCcccCCcCCCEEEECCCc
Confidence            9998653  247777776654

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.50  E-value=3.2e-13  Score=105.85  Aligned_cols=170  Identities=16%  Similarity=0.213  Sum_probs=114.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|++........     .+.. ..++.++.+|++|.+++.++++..     .+|+
T Consensus         8 tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          8 TGASSGIGQALAREYARQGATLGLVARRTDALQAFAA-----RLPK-AARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----hccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998654211100     0000 126889999999999888776531     4899


Q ss_pred             EEecCCCCh---------------------hhhHH----HHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA---------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~----~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++...                     .+...    ++.+++  +..++|++||...+..           ......
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~  150 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG-----------LPGAGA  150 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----------CCCCcc
Confidence            999987521                     01222    333443  4578999998665311           112233


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.       +..++++++++|+.+.++....             ....       ...++..+++++.++
T Consensus       151 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~-------~~~~~~~~~~a~~~~  210 (257)
T PRK07024        151 YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH-------------NPYP-------MPFLMDADRFAARAA  210 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc-------------CCCC-------CCCccCHHHHHHHHH
Confidence            5 8898887765       3458999999999998873100             0000       001357899999999


Q ss_pred             HHhcCCC
Q 025702          201 QVLGNEK  207 (249)
Q Consensus       201 ~~~~~~~  207 (249)
                      .++.+..
T Consensus       211 ~~l~~~~  217 (257)
T PRK07024        211 RAIARGR  217 (257)
T ss_pred             HHHhCCC
Confidence            9998753

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.1e-12  Score=102.99  Aligned_cols=194  Identities=13%  Similarity=0.160  Sum_probs=125.5

Q ss_pred             CCCcccchHHHHHHHHHcCCe-EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|.||+++++.|+++|++ |++++|++.+....     ...+......+.++.+|+++++++.++++..     ++|
T Consensus        12 tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   86 (260)
T PRK06198         12 TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQ-----AAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLD   86 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-----HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            699999999999999999998 99999875442110     0111112346778899999999888877642     689


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC---CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      .|||+++...                    .+..+++++    +.   ...++|++||...++..           ....
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----------~~~~  155 (260)
T PRK06198         87 ALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-----------PFLA  155 (260)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----------CCcc
Confidence            9999988521                    112233333    22   23579999998775432           1123


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc------chHHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      .| .+|...|.+.+       ..+++++.++|++++++....      .....+........         ....+++++
T Consensus       156 ~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  226 (260)
T PRK06198        156 AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------PFGRLLDPD  226 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------CccCCcCHH
Confidence            35 88988887654       246889999999999875211      00011111111111         123467899


Q ss_pred             HHHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          194 DLARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      |+++++.+++....  ..|+.+.+.++.
T Consensus       227 ~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        227 EVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHHHHHHHHcChhhCCccCceEeECCcc
Confidence            99999999986543  357788877654

>PRK08589 short chain dehydrogenase; Validated

Probab=99.49  E-value=1.2e-12  Score=103.47  Aligned_cols=197  Identities=17%  Similarity=0.152  Sum_probs=123.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+ .......     ..+.....++.++.+|++|.+++..+++..     ++|+
T Consensus        12 tGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   85 (272)
T PRK08589         12 TGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETV-----DKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV   85 (272)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHH-----HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence            7999999999999999999999999998 3321110     111112346889999999998887777532     5899


Q ss_pred             EEecCCCChh---------------------h----hHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~----~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+++....                     +    .+.++..+. +..++|++||...+...           .....|
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  154 (272)
T PRK08589         86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAAD-----------LYRSGY  154 (272)
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCC-----------CCCchH
Confidence            9999885311                     0    112333333 33689999987654221           112345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch---HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                       .+|...+.+++       ..+++++.+.||.+..+......   ...+............     ....+..++|++++
T Consensus       155 ~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~  229 (272)
T PRK08589        155 NAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT-----PLGRLGKPEEVAKL  229 (272)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC-----CCCCCcCHHHHHHH
Confidence             88988877653       35799999999998876321100   0000001111000000     11124678999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCc
Q 025702          199 FVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++++...  ...|+.+.+.++.
T Consensus       230 ~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        230 VVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHHcCchhcCcCCCEEEECCCc
Confidence            99998753  2367788887764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.49  E-value=1.7e-12  Score=102.20  Aligned_cols=187  Identities=17%  Similarity=0.144  Sum_probs=120.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||.++++.|+++|++|++++|++....              ...+.++.+|++|++++.++++.     .++|+
T Consensus        15 tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171         15 TGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998875521              23678889999999988887764     26899


Q ss_pred             EEecCCCChh-----------------------------hhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCC
Q 025702           76 VYDINGREAD-----------------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCET  120 (249)
Q Consensus        76 Vi~~~~~~~~-----------------------------~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (249)
                      |||+++....                             +...++++    +.  +..++|++||...+..         
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------  151 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG---------  151 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC---------
Confidence            9999885210                             11223333    22  3458999998765421         


Q ss_pred             CCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceee-CCCCCcchH-----------HHHHHHHHcCCCeeec
Q 025702          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVE-----------EWFFHRLKAGRPIPIP  180 (249)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~-g~~~~~~~~-----------~~~~~~~~~~~~~~~~  180 (249)
                        ......| .+|...+.+.+       ..+++++.++||.+. .+.......           ..+.....+....+  
T Consensus       152 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  227 (266)
T PRK06171        152 --SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP--  227 (266)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc--
Confidence              1123345 88888776653       357899999999875 221110000           01111111100111  


Q ss_pred             CCCcceEeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          181 GSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                           ...+...+|+|+++.+++....  -.|+++++.+|.
T Consensus       228 -----~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        228 -----LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             -----CCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence                 1234668999999999987532  357778877654

>TIGR02415 23BDH acetoin reductases

Probab=99.49  E-value=4.7e-13  Score=104.68  Aligned_cols=197  Identities=20%  Similarity=0.189  Sum_probs=120.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||.++++.|++.|++|+++.|+........     ..+......+.++.+|++|++++.++++..     .+|+
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA-----KEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999998754321110     111122346888999999999888776532     5899


Q ss_pred             EEecCCCChh--------------------hhH----HHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------EVE----PILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~~----~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++....                    ...    .++..+.  + ..++|++||......           ......
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~  149 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG-----------NPILSA  149 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC-----------CCCCcc
Confidence            9999875211                    111    2233332  2 368999998654311           112334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeec------CCCcceEeeeeHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP------GSGIQVTQLGHVKD  194 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D  194 (249)
                      | .+|...+.+.+       ..++++++++|+.+..+..     ..+..........+..      ........+.+++|
T Consensus       150 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (254)
T TIGR02415       150 YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMW-----EEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPED  224 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhh-----hhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHH
Confidence            5 88988877653       2468999999998866531     0110000000000000      00001123677899


Q ss_pred             HHHHHHHHhcCCCC--CCceEEecCC
Q 025702          195 LARAFVQVLGNEKA--SRQVFNISGE  218 (249)
Q Consensus       195 ~a~~~~~~~~~~~~--~~~~~~i~~~  218 (249)
                      +++++.++++....  .|..+.+.++
T Consensus       225 ~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       225 VAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             HHHHHHhhcccccCCccCcEEEecCC
Confidence            99999999987532  4666666554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.49  E-value=6.7e-12  Score=100.89  Aligned_cols=153  Identities=15%  Similarity=0.059  Sum_probs=99.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||++++++|+++|++|++++|+..+.....     ..+..  ....+.++.+|+.|.+++.++++..     ++
T Consensus        22 tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i   96 (306)
T PRK06197         22 TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAA-----ARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI   96 (306)
T ss_pred             cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence            799999999999999999999999999865421110     00110  1246888999999999888777632     58


Q ss_pred             cEEEecCCCCh------------------hh----hHHHHHhCC--CCCeEEEeeccccc--cCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA------------------DE----VEPILDALP--NLEQFIYCSSAGVY--LKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~--~~~~~~~~~e~~~~~~~~  127 (249)
                      |+|||++|...                  .+    +..++..++  +..++|++||...+  +...........+..+..
T Consensus        97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~  176 (306)
T PRK06197         97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVA  176 (306)
T ss_pred             CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHH
Confidence            99999997521                  11    445666655  45799999997643  221111111112233444


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEE--EeecceeeCCC
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWT--SLRPVYIYGPL  158 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~--~~r~~~v~g~~  158 (249)
                      .| .+|...+.+.+       ..+++++  .+.||.+..+.
T Consensus       177 ~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        177 AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            56 99988776653       2344444  45799887764

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.2e-12  Score=101.41  Aligned_cols=193  Identities=13%  Similarity=0.134  Sum_probs=122.2

Q ss_pred             CCCcc-cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-c-cCceEEEEeccCCHHHHHHhhhh-----CC
Q 025702            1 MGGTR-FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (249)
Q Consensus         1 ~G~tG-~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~d~~d~~~l~~~~~~-----~~   72 (249)
                      |||+| -||+++++.|+++|++|++++|+........     ..+.. . ...+.++.+|+.+++++.++++.     .+
T Consensus        23 tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   97 (262)
T PRK07831         23 TAAAGTGIGSATARRALEEGARVVISDIHERRLGETA-----DELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR   97 (262)
T ss_pred             ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            69987 5999999999999999999988765421110     01111 1 13678899999999988887763     26


Q ss_pred             CcEEEecCCCCh--------------------hhhHHH----HHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA--------------------DEVEPI----LDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        73 ~d~Vi~~~~~~~--------------------~~~~~~----~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +|++||+++...                    .+...+    +..+.  + ..++|++||...+.           +..+
T Consensus        98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~~  166 (262)
T PRK07831         98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR-----------AQHG  166 (262)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------CCCC
Confidence            899999998521                    111112    22222  2 45788888755421           1123


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ...| .+|...+.+.+       ..+++++.++|+.+..+.............+.+..++         ..+..++|+++
T Consensus       167 ~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~va~  237 (262)
T PRK07831        167 QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF---------GRAAEPWEVAN  237 (262)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            3345 89988887753       3578999999999988753211112222233332221         12455799999


Q ss_pred             HHHHHhcCCC--CCCceEEecCC
Q 025702          198 AFVQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (249)
                      ++++++....  ..|+.+.+.++
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCCC
Confidence            9999887642  35677766653

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.48  E-value=5.9e-13  Score=103.46  Aligned_cols=172  Identities=15%  Similarity=0.134  Sum_probs=113.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCCHHHHHHhhhhC--CCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~~l~~~~~~~--~~d~Vi   77 (249)
                      |||+|++|.++++.|+++|++|++++|++.+.....     ..+. ....+++++.+|+.|.+++.++++..  .+|.||
T Consensus         7 tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          7 IGATSDIARACARRYAAAGARLYLAARDVERLERLA-----DDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-----HHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            799999999999999999999999999875421110     0000 11347889999999999888877632  579999


Q ss_pred             ecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccc
Q 025702           78 DINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG  131 (249)
Q Consensus        78 ~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  131 (249)
                      |+++...                    .+...++++    +.  +..++|++||......          ......|..+
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~~Y~~s  151 (243)
T PRK07102         82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG----------RASNYVYGSA  151 (243)
T ss_pred             ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC----------CCCCcccHHH
Confidence            9987521                    122223333    32  4678999998653211          0111223388


Q ss_pred             hHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          132 KLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       132 k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      |...+.+.       .+.+++++.++|+.+.++...             +.  ..+     ....+.++|+++.++.+++
T Consensus       152 K~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~-------------~~--~~~-----~~~~~~~~~~a~~i~~~~~  211 (243)
T PRK07102        152 KAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA-------------GL--KLP-----GPLTAQPEEVAKDIFRAIE  211 (243)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh-------------cc--CCC-----ccccCCHHHHHHHHHHHHh
Confidence            87766554       245789999999999887210             00  011     1134678999999999998


Q ss_pred             CCC
Q 025702          205 NEK  207 (249)
Q Consensus       205 ~~~  207 (249)
                      ++.
T Consensus       212 ~~~  214 (243)
T PRK07102        212 KGK  214 (243)
T ss_pred             CCC
Confidence            753

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.48  E-value=3.1e-12  Score=100.05  Aligned_cols=191  Identities=15%  Similarity=0.122  Sum_probs=121.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||++++++|.+.|++|+++++......       ...+......+..+.+|+.|.+++.+++++     .++|+
T Consensus        16 tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         16 TGCDTGLGQGMALGLAEAGCDIVGINIVEPTET-------IEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEecCcchHHH-------HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999998876532210       011122234678889999999988888864     26999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||++|...                    .+...++++    +.  + ..++|++||...+....           ....
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~  157 (253)
T PRK08993         89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI-----------RVPS  157 (253)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC-----------CCcc
Confidence            999998521                    112223333    22  1 35899999987653321           1224


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.+       ..+++++.++||.+-.+...... .........+.  ++       ..-+...+|+++.+
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~eva~~~  228 (253)
T PRK08993        158 YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDR--IP-------AGRWGLPSDLMGPV  228 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhc--CC-------CCCCcCHHHHHHHH
Confidence            5 88988777653       35789999999999776421100 00111111111  11       11255689999999


Q ss_pred             HHHhcCCC--CCCceEEecCC
Q 025702          200 VQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~  218 (249)
                      .+++....  ..|..+.+.++
T Consensus       229 ~~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        229 VFLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHHhCccccCccCcEEEECCC
Confidence            99997642  25667766654

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.48  E-value=4.7e-13  Score=105.28  Aligned_cols=194  Identities=16%  Similarity=0.235  Sum_probs=122.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||.++++.|++.|++|++++|++......     ...+.....++.++.+|++|++++.++++..     ++|+
T Consensus        15 tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~   89 (264)
T PRK07576         15 VGGTSGINLGIAQAFARAGANVAVASRSQEKVDAA-----VAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV   89 (264)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999986542111     0111122346778899999999888877642     5899


Q ss_pred             EEecCCCC--------------------hhhhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGRE--------------------ADEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~--------------------~~~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||+++..                    ..+..+++.+    ++ ...++|++||...+.           +......| 
T Consensus        90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~-----------~~~~~~~Y~  158 (264)
T PRK07576         90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV-----------PMPMQAHVC  158 (264)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc-----------CCCCccHHH
Confidence            99998631                    1123334433    22 235899999865431           11223345 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH-HHHH-HHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .+|...+.+++       ..+++++.++|+.+.+........+ .... .....  .+       ...+...+|++++++
T Consensus       159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~  229 (264)
T PRK07576        159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS--VP-------LKRNGTKQDIANAAL  229 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc--CC-------CCCCCCHHHHHHHHH
Confidence            88988887764       2568899999998875321100100 0000 11111  11       123466899999999


Q ss_pred             HHhcCCC--CCCceEEecCCc
Q 025702          201 QVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++..+.  ..|..+.+.++.
T Consensus       230 ~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        230 FLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHcChhhcCccCCEEEECCCc
Confidence            9997532  257777777764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.48  E-value=3.8e-12  Score=100.00  Aligned_cols=195  Identities=16%  Similarity=0.154  Sum_probs=122.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||.++++.|.++|+.|+++.|+..+......    ..+.....++.++.+|++|.+++.++++..     .+|+
T Consensus        13 tGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~----~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936         13 TGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVA----EEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH----HHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999998886533211110    111111346778899999999888777532     5899


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++....                        ..+.++..+.  + ..++|++||...+           .+..+...
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~  157 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-----------IPWPLFVH  157 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------CCCCCCcc
Confidence            9999985211                        0122344443  2 3689999985432           12223344


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.       ...+++++.++|+.+..+.....+ .+..........+         ...+...+|+++++
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~  228 (261)
T PRK08936        158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP---------MGYIGKPEEIAAVA  228 (261)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            5 8887666544       235799999999999887532111 1111111111111         11356689999999


Q ss_pred             HHHhcCC--CCCCceEEecCCc
Q 025702          200 VQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      .+++...  ...|..+.+.++.
T Consensus       229 ~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        229 AWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             HHHcCcccCCccCcEEEECCCc
Confidence            9988753  2356667666654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.48  E-value=1.3e-12  Score=102.61  Aligned_cols=195  Identities=15%  Similarity=0.145  Sum_probs=120.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||++.||+++++.|+++|++|+++.|+.........    ..+. .....+.++.+|++|+++++++++..     ++|
T Consensus        14 tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         14 SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIA----EDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            7999999999999999999999888765432111110    0111 11346889999999999888877642     689


Q ss_pred             EEEecCCCCh---------------hh---------------hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCC
Q 025702           75 VVYDINGREA---------------DE---------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (249)
Q Consensus        75 ~Vi~~~~~~~---------------~~---------------~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (249)
                      ++||+++...               ..               ++.++..++  +..++|++||...+.           +
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~  158 (260)
T PRK08416         90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV-----------Y  158 (260)
T ss_pred             EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc-----------C
Confidence            9999986310               01               222333444  346899999865421           1


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      ......| .+|...+.+.+       ..+++++.+.||.+-.+..... -............+.         ..+..++
T Consensus       159 ~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~  229 (260)
T PRK08416        159 IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL---------NRMGQPE  229 (260)
T ss_pred             CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC---------CCCCCHH
Confidence            1112235 88988877653       3578999999998866531100 001111111111111         1256689


Q ss_pred             HHHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          194 DLARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      |+++++++++....  ..|+.+.+.++.
T Consensus       230 ~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        230 DLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             HHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            99999999987532  357777776654

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.47  E-value=5.6e-13  Score=105.45  Aligned_cols=136  Identities=18%  Similarity=0.138  Sum_probs=95.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|+...... +.          ..++.++.+|+.|.+.+.++++..     ++|+
T Consensus         7 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          7 TGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LA----------AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654211 10          135778899999999888777542     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||++|...                    .+...++++    ++ +..++|++||...+..           ......| 
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  144 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV-----------TPFAGAYC  144 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC-----------CCCccHHH
Confidence            999998521                    112233333    33 4468999988654311           1112345 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCC
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL  158 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~  158 (249)
                      .+|...+.+.+       ..+++++.++||.+..+.
T Consensus       145 ~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~  180 (274)
T PRK05693        145 ASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF  180 (274)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence            88887776542       368999999999997763

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.46  E-value=1.1e-11  Score=97.13  Aligned_cols=195  Identities=15%  Similarity=0.107  Sum_probs=121.8

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCC-CC-----CchhhhhccCceEEEEeccCCHHHHHHhhhh--
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GE-----SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~-----~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~--   70 (249)
                      |||+|  .+|.++++.|+++|++|++++|++.+...... ..     ....+......++++.+|+++.+++.++++.  
T Consensus        11 tGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   90 (256)
T PRK12748         11 TGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVS   90 (256)
T ss_pred             eCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            69985  69999999999999999999997432110000 00     0011111234688999999999888777763  


Q ss_pred             ---CCCcEEEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCC
Q 025702           71 ---KGFDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (249)
Q Consensus        71 ---~~~d~Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (249)
                         ..+|+|||+++...                    .+...+++++    .  ...++|++||...++..         
T Consensus        91 ~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------  161 (256)
T PRK12748         91 ERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM---------  161 (256)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC---------
Confidence               26899999987521                    1223333332    2  34589999987664321         


Q ss_pred             CCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                        .....| .+|...+.+++       ..+++++.++|+.+..+.....    .........+    .     ..+...+
T Consensus       162 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~----~~~~~~~~~~----~-----~~~~~~~  226 (256)
T PRK12748        162 --PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE----LKHHLVPKFP----Q-----GRVGEPV  226 (256)
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh----HHHhhhccCC----C-----CCCcCHH
Confidence              122346 89998888753       2478999999998876632111    1111111111    1     1234579


Q ss_pred             HHHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          194 DLARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      |+++++.+++...  ...++.+++.++.
T Consensus       227 ~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        227 DAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             HHHHHHHHHhCcccccccCCEEEecCCc
Confidence            9999999888653  2357788887653

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.9e-12  Score=101.19  Aligned_cols=171  Identities=19%  Similarity=0.143  Sum_probs=113.0

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhh----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~----~~~d   74 (249)
                      |||+|.+|++++++|+++| ++|++++|+++.....+.    .++... ..+++++.+|+.|.+++.++++.    .++|
T Consensus        14 tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~----~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~id   89 (253)
T PRK07904         14 LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAV----AQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDVD   89 (253)
T ss_pred             EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHH----HHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCCC
Confidence            7999999999999999995 999999998764111110    011111 23688999999998876655542    3799


Q ss_pred             EEEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||++|....                        ..+.++..+.  +..++|++||...+..           ..+...
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~-----------~~~~~~  158 (253)
T PRK07904         90 VAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV-----------RRSNFV  158 (253)
T ss_pred             EEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC-----------CCCCcc
Confidence            99998775311                        0123455554  5679999999764311           112223


Q ss_pred             c-cchHHHHHH-------HhhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~-------~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|.....+       ++..++++++++||.+..+...            ....       .  ...+..+|+|+.++
T Consensus       159 Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~------------~~~~-------~--~~~~~~~~~A~~i~  217 (253)
T PRK07904        159 YGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA------------HAKE-------A--PLTVDKEDVAKLAV  217 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc------------cCCC-------C--CCCCCHHHHHHHHH
Confidence            5 888766543       2456899999999999876210            0000       0  11367899999999


Q ss_pred             HHhcCCC
Q 025702          201 QVLGNEK  207 (249)
Q Consensus       201 ~~~~~~~  207 (249)
                      ..+.++.
T Consensus       218 ~~~~~~~  224 (253)
T PRK07904        218 TAVAKGK  224 (253)
T ss_pred             HHHHcCC
Confidence            9998764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.45  E-value=1.8e-12  Score=100.32  Aligned_cols=187  Identities=16%  Similarity=0.222  Sum_probs=117.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|++|+++++.|+++|++|++++|++.......     ..... ..+++++.+|+.+.+.+.++++..     ++|.
T Consensus        11 tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786         11 IGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMK-----KTLSK-YGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999999865421100     00111 135788999999998888776532     4699


Q ss_pred             EEecCCCCh------------------hh----hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           76 VYDINGREA------------------DE----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        76 Vi~~~~~~~------------------~~----~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      ++|+++...                  ..    .+.++..+++..++|++||......          +..+...| .+|
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~~~~~~Y~~sK  154 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----------ASPDQLSYAVAK  154 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----------CCCCchHHHHHH
Confidence            999987421                  01    1112222333467999998654110          11223335 888


Q ss_pred             HHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          133 LNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       133 ~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      ...+.++       ...+++++++||++++++.....    ....      ..  ..   ...++..+|+++++++++..
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~~~~------~~--~~---~~~~~~~~~va~~~~~~~~~  219 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER----NWKK------LR--KL---GDDMAPPEDFAKVIIWLLTD  219 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----hhhh------hc--cc---cCCCCCHHHHHHHHHHHhcc
Confidence            7766543       23589999999999998742110    0000      00  00   11346789999999999975


Q ss_pred             CC--CCCceEEecCC
Q 025702          206 EK--ASRQVFNISGE  218 (249)
Q Consensus       206 ~~--~~~~~~~i~~~  218 (249)
                      +.  ..|+.+.+.++
T Consensus       220 ~~~~~~g~~~~~~~~  234 (238)
T PRK05786        220 EADWVDGVVIPVDGG  234 (238)
T ss_pred             cccCccCCEEEECCc
Confidence            33  24666666543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.45  E-value=2.1e-12  Score=101.55  Aligned_cols=191  Identities=17%  Similarity=0.175  Sum_probs=122.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|++..... +       ..+...++.++.+|+.|.+++..+++..     ++|+
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200         12 TGGGSGIGRALVERFLAEGARVAVLERSAEKLAS-L-------RQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H-------HHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654211 0       0111346788999999998888777532     6999


Q ss_pred             EEecCCCCh----------h---------------hhHHHHH----hCC-CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA----------D---------------EVEPILD----ALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        76 Vi~~~~~~~----------~---------------~~~~~~~----a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +||+++...          .               +...+++    .++ ...++|++||...+...           .+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  152 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG-----------GG  152 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----------CC
Confidence            999998521          0               0111222    233 34579999987764221           12


Q ss_pred             CCcc-cchHHHHHHHhh------cCCcEEEeecceeeCCCCCcch----------HHHHHHHHHcCCCeeecCCCcceEe
Q 025702          126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQ  188 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~~------~~~~~~~~r~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~  188 (249)
                      ...| .+|...+.+.+.      .++++..+.||.+..+......          .+.......+..+         ...
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r  223 (263)
T PRK06200        153 GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITP---------LQF  223 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCC---------CCC
Confidence            2345 899888776532      2489999999998766321100          0001111111111         123


Q ss_pred             eeeHHHHHHHHHHHhcCC-C--CCCceEEecCCc
Q 025702          189 LGHVKDLARAFVQVLGNE-K--ASRQVFNISGEK  219 (249)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~-~--~~~~~~~i~~~~  219 (249)
                      +...+|+++++++++... .  ..|+.+.+.+|.
T Consensus       224 ~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        224 APQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             CCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence            566899999999998754 2  367788887764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.45  E-value=2.3e-12  Score=110.97  Aligned_cols=191  Identities=16%  Similarity=0.231  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||.++++.|.++|++|++++|+.......        .......+..+.+|++|++++.++++.     -.+|+
T Consensus       275 tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        275 TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKL--------AEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976542111        011134567789999999988887764     25899


Q ss_pred             EEecCCCCh---------------------hhhHHHHH----hCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA---------------------DEVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~----a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||++|...                     .+...+.+    .+++..++|++||...+..           ..+...| 
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  415 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA-----------LPPRNAYC  415 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC-----------CCCCchhH
Confidence            999988521                     01222222    3334468999999765421           1223446 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch--HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .+|...+.+.+       ..+++++.+.||.+.++......  .........+..+.         ..+..++|+|++++
T Consensus       416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dia~~~~  486 (520)
T PRK06484        416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL---------GRLGDPEEVAEAIA  486 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            89988876653       34789999999999887421100  00111112221111         12457899999999


Q ss_pred             HHhcCC--CCCCceEEecCCc
Q 025702          201 QVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++...  ...|+.+.+.++.
T Consensus       487 ~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        487 FLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHhCccccCccCcEEEECCCc
Confidence            998754  2367888887764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.45  E-value=3e-12  Score=100.52  Aligned_cols=175  Identities=18%  Similarity=0.145  Sum_probs=112.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh------CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~------~~~d   74 (249)
                      |||+|++|+++++.|+++|++|++++|++........     ...  ...+.++.+|+.|.+++.++++.      .++|
T Consensus         7 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          7 TGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAA-----ELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----Hhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            7999999999999999999999999998764221100     000  24688999999999888877652      2679


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeecccc-ccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~  127 (249)
                      +|||+++...                    .+...++++    ++  +..++|++||... ++..            ...
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~  147 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP------------GLA  147 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC------------Cch
Confidence            9999998631                    112223333    33  4578999998654 3221            123


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++.++|+.+..+...... .........           ...-.+..+|+++++
T Consensus       148 ~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~va~~~  215 (260)
T PRK08267        148 VYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS-NEVDAGSTK-----------RLGVRLTPEDVAEAV  215 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc-chhhhhhHh-----------hccCCCCHHHHHHHH
Confidence            45 88887766542       34789999999998765321100 000000000           011135579999999


Q ss_pred             HHHhcCC
Q 025702          200 VQVLGNE  206 (249)
Q Consensus       200 ~~~~~~~  206 (249)
                      +.+++..
T Consensus       216 ~~~~~~~  222 (260)
T PRK08267        216 WAAVQHP  222 (260)
T ss_pred             HHHHhCC
Confidence            9999764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.44  E-value=4.9e-12  Score=98.57  Aligned_cols=171  Identities=18%  Similarity=0.186  Sum_probs=113.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|.+|+++++.|+++|++|++++|++.......     ..+...  ...+.++.+|++|.+++.++++..     ++
T Consensus         8 tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (248)
T PRK08251          8 TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELK-----AELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL   82 (248)
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421110     001110  246888999999998887776532     69


Q ss_pred             cEEEecCCCChh--------------------hhHHHHH----hCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD--------------------EVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~~--------------------~~~~~~~----a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |+|||++|....                    +...+++    .++  +..++|++||......          .+.+..
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~~~~~  152 (248)
T PRK08251         83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG----------LPGVKA  152 (248)
T ss_pred             CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC----------CCCCcc
Confidence            999999975211                    1222233    332  5678999998654311          112234


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++.++|+++.++...         .  .       +.   ....+..+|.++++
T Consensus       153 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~---------~--~-------~~---~~~~~~~~~~a~~i  211 (248)
T PRK08251        153 AYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA---------K--A-------KS---TPFMVDTETGVKAL  211 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh---------c--c-------cc---CCccCCHHHHHHHH
Confidence            45 88988776552       24688999999998776210         0  0       00   11256789999999


Q ss_pred             HHHhcCCC
Q 025702          200 VQVLGNEK  207 (249)
Q Consensus       200 ~~~~~~~~  207 (249)
                      +.+++...
T Consensus       212 ~~~~~~~~  219 (248)
T PRK08251        212 VKAIEKEP  219 (248)
T ss_pred             HHHHhcCC
Confidence            99998654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.44  E-value=1.4e-12  Score=114.88  Aligned_cols=203  Identities=17%  Similarity=0.168  Sum_probs=125.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|+........     ..+..  ....+..+.+|++|.+++.++++..     ++
T Consensus       420 TGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~-----~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i  494 (676)
T TIGR02632       420 TGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVA-----AEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV  494 (676)
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999865421100     01100  1235778899999999998888643     69


Q ss_pred             cEEEecCCCChh--------------------h----hHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        74 d~Vi~~~~~~~~--------------------~----~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      |+|||++|....                    +    .+.++..++  + ..++|++||...+..           ....
T Consensus       495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~-----------~~~~  563 (676)
T TIGR02632       495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA-----------GKNA  563 (676)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC-----------CCCC
Confidence            999999986311                    0    112233333  2 358999998654311           1123


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceee-CCCCCcchHHHHHHHHH-cCCC----eeecCCCcceEeeeeH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLK-AGRP----IPIPGSGIQVTQLGHV  192 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~-g~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~i~~  192 (249)
                      ..| .+|...+.+++       ..+++++.++|+.++ |.+......  ...... .+..    ...+........+++.
T Consensus       564 ~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~p  641 (676)
T TIGR02632       564 SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEW--REERAAAYGIPADELEEHYAKRTLLKRHIFP  641 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccc--hhhhhhcccCChHHHHHHHHhcCCcCCCcCH
Confidence            346 89988887763       247899999999887 332111100  000000 0000    0000111122346789


Q ss_pred             HHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          193 KDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      +|+|+++.+++...  ...|..+++.+|...
T Consensus       642 eDVA~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       642 ADIAEAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHHHHHHHHhCCcccCCcCcEEEECCCchh
Confidence            99999999998653  335788999887643

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2e-12  Score=100.89  Aligned_cols=188  Identities=13%  Similarity=0.106  Sum_probs=115.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC---------
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~---------   71 (249)
                      |||+|++|++++++|+++|++|++++|++.+....+.       .....+++++.+|++|.++++++++..         
T Consensus         7 tGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          7 TGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA-------EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             ecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH-------hccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            7999999999999999999999999998633211111       111357889999999999888877632         


Q ss_pred             CCcEEEecCCCC---------------------hhh----hHHHHHhCC---CCCeEEEeeccccccCCCCCCCCCCCCC
Q 025702           72 GFDVVYDINGRE---------------------ADE----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (249)
Q Consensus        72 ~~d~Vi~~~~~~---------------------~~~----~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (249)
                      ...++||++|..                     ..+    .+.++..++   ..+++|++||...+           .+.
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-----------~~~  148 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK-----------NPY  148 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc-----------CCC
Confidence            112788887642                     111    333444443   24589999986653           122


Q ss_pred             CCCCcc-cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcc-----hHHHHHHHHHcCCCeeecCCCcceEe
Q 025702          124 DPKSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQ  188 (249)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (249)
                      .+...| .+|...+.+.+         ..++++..++||.+-.+.....     .............     .    ...
T Consensus       149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~  219 (251)
T PRK06924        149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK-----E----EGK  219 (251)
T ss_pred             CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh-----h----cCC
Confidence            234446 88988877653         2368899999998765521000     0000000110000     0    112


Q ss_pred             eeeHHHHHHHHHHHhcC-CCCCCceEEe
Q 025702          189 LGHVKDLARAFVQVLGN-EKASRQVFNI  215 (249)
Q Consensus       189 ~i~~~D~a~~~~~~~~~-~~~~~~~~~i  215 (249)
                      +..++|+|+.++.++.. ....|+.+.+
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            57789999999999986 3334555544

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.44  E-value=3.6e-12  Score=100.80  Aligned_cols=179  Identities=18%  Similarity=0.220  Sum_probs=113.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCC---chhhhhccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|++|+++++.|+++|++|++++|+...... +....   ..++.....++.++.+|+++.+++.++++..     +
T Consensus        12 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   90 (273)
T PRK08278         12 TGASRGIGLAIALRAARDGANIVIAAKTAEPHPK-LPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGG   90 (273)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecccccccc-hhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998654211 11000   1112222356888999999999888877642     7


Q ss_pred             CcEEEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        73 ~d~Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +|+|||+++...                    .+...+++++    .  +..++|++||.....         .....+.
T Consensus        91 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------~~~~~~~  161 (273)
T PRK08278         91 IDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---------PKWFAPH  161 (273)
T ss_pred             CCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---------ccccCCc
Confidence            999999998521                    1233344443    2  245788888743210         0011233


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecce-eeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~-v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ..| .+|..+|.+++       ..+++++.+.|+. +-.+.         ......+.        .....+..++|+|+
T Consensus       162 ~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~---------~~~~~~~~--------~~~~~~~~p~~va~  224 (273)
T PRK08278        162 TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA---------VRNLLGGD--------EAMRRSRTPEIMAD  224 (273)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH---------HHhccccc--------ccccccCCHHHHHH
Confidence            456 99999888763       2478899999984 32221         11110111        11123567899999


Q ss_pred             HHHHHhcCC
Q 025702          198 AFVQVLGNE  206 (249)
Q Consensus       198 ~~~~~~~~~  206 (249)
                      +++.++...
T Consensus       225 ~~~~l~~~~  233 (273)
T PRK08278        225 AAYEILSRP  233 (273)
T ss_pred             HHHHHhcCc
Confidence            999998764

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.1e-12  Score=100.37  Aligned_cols=136  Identities=16%  Similarity=0.131  Sum_probs=97.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh---------C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------K   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~---------~   71 (249)
                      |||+|+||+++++.|+++|++|++++|+..+...          .....++.++.+|+.|.+++.++++.         .
T Consensus         7 tGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~----------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          7 TGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLA----------AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ecCCcchHHHHHHHHHhCCCEEEEEecCcchhhh----------hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            7999999999999999999999999998654210          01134688899999999988885543         2


Q ss_pred             CCcEEEecCCCChh---------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           72 GFDVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        72 ~~d~Vi~~~~~~~~---------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      .+|++||+++....                     +    .+.++..+.  +..++|++||...+.           +..
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  145 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN-----------AYA  145 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC-----------CCC
Confidence            58899999875211                     1    233444444  457999999977642           122


Q ss_pred             CCCcc-cchHHHHHHHh------hcCCcEEEeecceeeCC
Q 025702          125 PKSRH-KGKLNTESVLE------SKGVNWTSLRPVYIYGP  157 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~------~~~~~~~~~r~~~v~g~  157 (249)
                      +...| .+|...|.+++      ..++++..++|+.+-.+
T Consensus       146 ~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        146 GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            34456 88988888764      24788999999987554

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.8e-12  Score=103.50  Aligned_cols=173  Identities=16%  Similarity=0.168  Sum_probs=114.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||.++++.|+++|++|++++|+...... +    ...+......+.++.+|+.|.+++.++++.     .++|+
T Consensus        46 tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~-~----~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         46 TGASSGIGEAAAEQFARRGATVVAVARREDLLDA-V----ADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998644211 0    011111134578899999999988887763     27899


Q ss_pred             EEecCCCChh----------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~~----------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |||++|....                      +    ++.++..++  +..++|++||.+++...          .....
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~p~~~  190 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA----------SPLFS  190 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC----------CCCcc
Confidence            9999875310                      1    122233333  56799999997654211          11123


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++.++||.+-.+....            ...    ..   ....+..+++|+.+
T Consensus       191 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~------------~~~----~~---~~~~~~pe~vA~~~  251 (293)
T PRK05866        191 VYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP------------TKA----YD---GLPALTADEAAEWM  251 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc------------ccc----cc---CCCCCCHHHHHHHH
Confidence            45 88988776542       357899999999876653100            000    00   11246789999999


Q ss_pred             HHHhcCCC
Q 025702          200 VQVLGNEK  207 (249)
Q Consensus       200 ~~~~~~~~  207 (249)
                      +.+++++.
T Consensus       252 ~~~~~~~~  259 (293)
T PRK05866        252 VTAARTRP  259 (293)
T ss_pred             HHHHhcCC
Confidence            99998753

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.44  E-value=7.4e-12  Score=98.55  Aligned_cols=196  Identities=20%  Similarity=0.227  Sum_probs=122.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-c-cCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|.||+++++.|+++|++|++++|++.+.....     ..+.. . ..++..+.+|++|.+++.++++.     .++
T Consensus        14 tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T PRK07062         14 TGGSSGIGLATVELLLEAGASVAICGRDEERLASAE-----ARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV   88 (265)
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999865422110     01111 1 13677889999999988877653     258


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |++||++|....                        .++.++..++  +..++|++||...+...           ....
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~  157 (265)
T PRK07062         89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE-----------PHMV  157 (265)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC-----------CCch
Confidence            999999985210                        1233444444  45799999987653211           1122


Q ss_pred             cc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchH---------HHHHHHHHcCCCeeecCCCcceEeee
Q 025702          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVE---------EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       128 ~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                      .| .+|...+.+.       .+.+++++.++||.+..+.....+.         ..+.........++       ...+.
T Consensus       158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~  230 (265)
T PRK07062        158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-------LGRLG  230 (265)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------cCCCC
Confidence            34 7777665544       2367999999999987763111110         00011110111111       12355


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          191 HVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ..+|+++++.+++...  ...|+++.+.+|.
T Consensus       231 ~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        231 RPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             CHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            6899999999988753  3367888887764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.44  E-value=2.9e-12  Score=100.52  Aligned_cols=194  Identities=19%  Similarity=0.220  Sum_probs=122.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++|++.......     .++.. ..++.++.+|++|.++++++++.     .++|+
T Consensus         6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKAL-----KELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421110     11111 13678899999999988887753     26999


Q ss_pred             EEecCCCChh-----------h---------------hHHHHHh-CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD-----------E---------------VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        76 Vi~~~~~~~~-----------~---------------~~~~~~a-~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +||++|....           .               ...++.. ++  +..++|++||...+.           +..+.
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  148 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE-----------PMPPL  148 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC-----------CCCCc
Confidence            9999885210           0               1122222 22  356899999977631           11223


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch----------HHH-HHHHHHcCCCeeecCCCcceE
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEW-FFHRLKAGRPIPIPGSGIQVT  187 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~  187 (249)
                      ..| .+|...+.+.+       ..++++..+.||.+-.+......          ... ......+..+         ..
T Consensus       149 ~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~  219 (259)
T PRK08340        149 VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP---------LK  219 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC---------cc
Confidence            345 78887776653       35788999999988776421100          000 0001111111         12


Q ss_pred             eeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      .+..++|+|+++++++...  ...|+.+.+.+|..
T Consensus       220 r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        220 RTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCceEeecCCcC
Confidence            3566899999999999854  33677787777643

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2.9e-12  Score=103.72  Aligned_cols=178  Identities=17%  Similarity=0.206  Sum_probs=115.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||+++++.|.++|++|++++|+.....+.     ...+......+.++.+|++|.++++++++.     .++|+
T Consensus        13 TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~-----~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (330)
T PRK06139         13 TGASSGIGQATAEAFARRGARLVLAARDEEALQAV-----AEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV   87 (330)
T ss_pred             cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999986542111     011112235677889999999988887753     26899


Q ss_pred             EEecCCCChh--------------------hh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|....                    +.    +.++..++  +..++|++||...+...           .....|
T Consensus        88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~-----------p~~~~Y  156 (330)
T PRK06139         88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ-----------PYAAAY  156 (330)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC-----------CCchhH
Confidence            9999985211                    11    22333333  34689999987654221           112335


Q ss_pred             -cchHHHHHHH-------hh-cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVL-------ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~-------~~-~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|.....+.       .. .++.++.+.|+.+.+|......      . ..+...      .....+++.+|+|++++
T Consensus       157 ~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~------~-~~~~~~------~~~~~~~~pe~vA~~il  223 (330)
T PRK06139        157 SASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA------N-YTGRRL------TPPPPVYDPRRVAKAVV  223 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc------c-cccccc------cCCCCCCCHHHHHHHHH
Confidence             8888654433       12 3789999999999888421110      0 001100      01123578999999999


Q ss_pred             HHhcCCC
Q 025702          201 QVLGNEK  207 (249)
Q Consensus       201 ~~~~~~~  207 (249)
                      .+++++.
T Consensus       224 ~~~~~~~  230 (330)
T PRK06139        224 RLADRPR  230 (330)
T ss_pred             HHHhCCC
Confidence            9998765

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.43  E-value=1.5e-12  Score=97.54  Aligned_cols=177  Identities=16%  Similarity=0.110  Sum_probs=116.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhcc-CceEEEEeccCCHHHHHHhhhh----C-CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA----K-GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~d~~~l~~~~~~----~-~~d   74 (249)
                      ||||+-+|.++++.|.++|++|++..|+.+...+...        ++. ..+..+..|++|.+++..+++.    . ++|
T Consensus        12 TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~--------~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221          12 TGASSGIGEATARALAEAGAKVVLAARREERLEALAD--------EIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             ecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHH--------hhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            7999999999999999999999999999877432111        112 4688889999999886665542    2 699


Q ss_pred             EEEecCCCC--------------------hhhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~--------------------~~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||..                    +.+..+...+    +.  +...+|.+||....           .+....+-
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~-----------~~y~~~~v  152 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR-----------YPYPGGAV  152 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc-----------ccCCCCcc
Confidence            999999973                    2223333333    32  55699999997641           11122233


Q ss_pred             c-cchHHHHHHH---h----hcCCcEEEeecceeeCCCCCc-chH--HHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVL---E----SKGVNWTSLRPVYIYGPLNYN-PVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~---~----~~~~~~~~~r~~~v~g~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|+.+..+.   |    ..+++++.+-||.+-...... ..-  ..-....            .....++..+|+|+
T Consensus       153 Y~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~------------y~~~~~l~p~dIA~  220 (246)
T COG4221         153 YGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKV------------YKGGTALTPEDIAE  220 (246)
T ss_pred             chhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHH------------hccCCCCCHHHHHH
Confidence            5 8888776654   2    357899999999874431100 000  0000000            01235678999999


Q ss_pred             HHHHHhcCCCC
Q 025702          198 AFVQVLGNEKA  208 (249)
Q Consensus       198 ~~~~~~~~~~~  208 (249)
                      ++.+++++|..
T Consensus       221 ~V~~~~~~P~~  231 (246)
T COG4221         221 AVLFAATQPQH  231 (246)
T ss_pred             HHHHHHhCCCc
Confidence            99999999864

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.41  E-value=1.8e-12  Score=104.99  Aligned_cols=152  Identities=16%  Similarity=0.197  Sum_probs=98.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||.++++.|+++|++|++++|+..+......     .+......+.++.+|+.|.++++++++.     .++|+
T Consensus        12 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   86 (322)
T PRK07453         12 TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQ-----ELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA   86 (322)
T ss_pred             EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence            7999999999999999999999999998654221100     0101124688899999999998887764     25999


Q ss_pred             EEecCCCCh----------h-----------hhHH----HHHhCC--C--CCeEEEeeccccccCCC--C--CCC-----
Q 025702           76 VYDINGREA----------D-----------EVEP----ILDALP--N--LEQFIYCSSAGVYLKSD--L--LPH-----  117 (249)
Q Consensus        76 Vi~~~~~~~----------~-----------~~~~----~~~a~~--~--~~~~i~~Ss~~v~~~~~--~--~~~-----  117 (249)
                      |||+||...          .           +...    ++..++  +  ..|+|++||...+....  .  .+.     
T Consensus        87 li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~  166 (322)
T PRK07453         87 LVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLG  166 (322)
T ss_pred             EEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchh
Confidence            999998421          0           1122    233332  2  25999999976543110  0  000     


Q ss_pred             ---------------CCCCCCCCCCcc-cchHHHHHHH----hh----cCCcEEEeecceeeCC
Q 025702          118 ---------------CETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYGP  157 (249)
Q Consensus       118 ---------------~e~~~~~~~~~~-~~k~~~e~~~----~~----~~~~~~~~r~~~v~g~  157 (249)
                                     .+..+..|...| .+|...+.+.    ++    .+++++.++||+|++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        167 DLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             hhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence                           011123455557 9997665433    32    3789999999999864

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.39  E-value=6.5e-12  Score=98.73  Aligned_cols=191  Identities=17%  Similarity=0.190  Sum_probs=118.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+....... .       ......+..+.+|+.|.+++.++++.     .++|+
T Consensus        11 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l-~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325        11 TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQEL-E-------AAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H-------hhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999976542111 0       01124678899999998888777653     26899


Q ss_pred             EEecCCCCh-------------------------hhhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA-------------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        76 Vi~~~~~~~-------------------------~~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +||++|...                         .+...++++    +. ...++|++||...+..           ...
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~  151 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP-----------NGG  151 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC-----------CCC
Confidence            999987421                         011223333    22 2357888887654311           112


Q ss_pred             CCcc-cchHHHHHHHh----h--cCCcEEEeecceeeCCCCCcchH---H----H--HHHHHHcCCCeeecCCCcceEee
Q 025702          126 KSRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVE---E----W--FFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~----~--~~~~~~~~r~~~v~g~~~~~~~~---~----~--~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      ...| .+|...+.+.+    +  ..++++.+.||.+..+.......   .    .  ......+.  ++       ...+
T Consensus       152 ~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~r~  222 (262)
T TIGR03325       152 GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV--LP-------IGRM  222 (262)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc--CC-------CCCC
Confidence            2345 88988887653    1  23789999999988764211000   0    0  00001111  11       1234


Q ss_pred             eeHHHHHHHHHHHhcCCC---CCCceEEecCCc
Q 025702          190 GHVKDLARAFVQVLGNEK---ASRQVFNISGEK  219 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~---~~~~~~~i~~~~  219 (249)
                      ...+|+++++++++..+.   ..|.++.+.++.
T Consensus       223 ~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       223 PDAEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             CChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence            568999999999887532   257788887764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.39  E-value=1.1e-11  Score=97.72  Aligned_cols=195  Identities=14%  Similarity=0.121  Sum_probs=116.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHH----HHhhhh-----
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFV----KSSLSA-----   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l----~~~~~~-----   70 (249)
                      |||+|+||+++++.|+++|++|+++.|...+....+.    .++.. ....+.++.+|++|.+.+    +++++.     
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         7 TGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLA----AELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             eCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHH----HHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            7999999999999999999999998765433211110    01110 123566789999998754    333321     


Q ss_pred             CCCcEEEecCCCCh-------h------------------------hhHHHHHh----CC--------CCCeEEEeeccc
Q 025702           71 KGFDVVYDINGREA-------D------------------------EVEPILDA----LP--------NLEQFIYCSSAG  107 (249)
Q Consensus        71 ~~~d~Vi~~~~~~~-------~------------------------~~~~~~~a----~~--------~~~~~i~~Ss~~  107 (249)
                      -++|+|||++|...       .                        +...++++    ++        +..++|++||..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence            26999999998521       0                        01112222    21        113577776644


Q ss_pred             cccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeee
Q 025702          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (249)
Q Consensus       108 v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (249)
                      ..           .+..+...| .+|...+.+.+       ..+++++.++||.+..+.....   ..........++  
T Consensus       163 ~~-----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~---~~~~~~~~~~~~--  226 (267)
T TIGR02685       163 TD-----------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF---EVQEDYRRKVPL--  226 (267)
T ss_pred             cc-----------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch---hHHHHHHHhCCC--
Confidence            31           122233446 99998887753       3579999999999876643211   111122221111  


Q ss_pred             cCCCcceEeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCccc
Q 025702          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                       +     ..+...+|+++++++++....  ..|..+.+.++..+
T Consensus       227 -~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       227 -G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             -C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence             0     123568999999999997642  36777888776544

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.39  E-value=3.6e-11  Score=96.90  Aligned_cols=153  Identities=14%  Similarity=0.041  Sum_probs=100.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|.||.+++++|+++|++|++++|+..+......     .+..  ....+.++.+|+.|.++++++++.     .++
T Consensus        20 TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~-----~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i   94 (313)
T PRK05854         20 TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVA-----AIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI   94 (313)
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            7999999999999999999999999998664221110     1111  123688899999999988877753     258


Q ss_pred             cEEEecCCCChh-------------------h----hHHHHHhCC-CCCeEEEeeccccc-cCCCCCCCCCCCCCCCCCc
Q 025702           74 DVVYDINGREAD-------------------E----VEPILDALP-NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        74 d~Vi~~~~~~~~-------------------~----~~~~~~a~~-~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~~~~~  128 (249)
                      |++||+||....                   +    +..++..++ +..++|++||...+ +......+.++.+..+...
T Consensus        95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  174 (313)
T PRK05854         95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRA  174 (313)
T ss_pred             cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhh
Confidence            999999885210                   1    222333343 44689999987543 2222222222233344445


Q ss_pred             c-cchHHHHHHHh---------hcCCcEEEeecceeeCCC
Q 025702          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPL  158 (249)
Q Consensus       129 ~-~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~  158 (249)
                      | .+|...+.+.+         ..++.++.+.||.+..+.
T Consensus       175 Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        175 YSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence            6 89987766542         135889999999987653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.38  E-value=5.7e-12  Score=96.90  Aligned_cols=178  Identities=17%  Similarity=0.151  Sum_probs=120.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      ||||+-||..+++.|.++|++|+++.|+.++..+..     .++. ..+-.++++.+|+++++++..+.++     ..+|
T Consensus        12 TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la-----~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Id   86 (265)
T COG0300          12 TGASSGIGAELAKQLARRGYNLILVARREDKLEALA-----KELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPID   86 (265)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-----HHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCccc
Confidence            799999999999999999999999999988743211     1111 1234678999999999888877653     3799


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||....                    +    ++.++..+.  +..++|.++|...|-+.          +....|
T Consensus        87 vLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~----------p~~avY  156 (265)
T COG0300          87 VLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT----------PYMAVY  156 (265)
T ss_pred             EEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC----------cchHHH
Confidence            99999997421                    1    222333332  56799999998875211          111223


Q ss_pred             ccchHHHHHH-------HhhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          129 HKGKLNTESV-------LESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       129 ~~~k~~~e~~-------~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      +.+|..+-.+       ++..++.++.+.||.+..++..           .++.....   .....-++..+|+|+..+.
T Consensus       157 ~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-----------~~~~~~~~---~~~~~~~~~~~~va~~~~~  222 (265)
T COG0300         157 SATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-----------AKGSDVYL---LSPGELVLSPEDVAEAALK  222 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-----------cccccccc---ccchhhccCHHHHHHHHHH
Confidence            3888665433       2457899999999988776321           01111111   0113457889999999999


Q ss_pred             HhcCCC
Q 025702          202 VLGNEK  207 (249)
Q Consensus       202 ~~~~~~  207 (249)
                      .+.+.+
T Consensus       223 ~l~~~k  228 (265)
T COG0300         223 ALEKGK  228 (265)
T ss_pred             HHhcCC
Confidence            999865

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.38  E-value=5.9e-11  Score=92.73  Aligned_cols=191  Identities=9%  Similarity=0.034  Sum_probs=120.3

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+  +-||++++++|+++|++|++..|+... .....     ++.  ...+.++.+|++|.++++++++.     .++
T Consensus        13 tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~-~~~~~-----~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079         13 MGVANKRSIAWGCAQAIKDQGATVIYTYQNDRM-KKSLQ-----KLV--DEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEecCchHH-HHHHH-----hhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            6888  689999999999999999999887321 11110     000  23577899999999888877653     258


Q ss_pred             cEEEecCCCChh------------------------h----hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~----~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||++|....                        +    ++.++..+++..++|++||.....           +...
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-----------~~~~  153 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER-----------AIPN  153 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc-----------cCCc
Confidence            999999885210                        0    122233344346899999865421           1112


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.+.||.+-.+..... ..........+..+.         ..+..++|++
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva  224 (252)
T PRK06079        154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD---------GVGVTIEEVG  224 (252)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc---------cCCCCHHHHH
Confidence            2345 88988777653       3579999999999977632110 011222222222111         1256689999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++.+++...  ...|+++.+.++.
T Consensus       225 ~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        225 NTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             HHHHHHhCcccccccccEEEeCCce
Confidence            9999999763  2357777776653

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.38  E-value=2.9e-11  Score=95.70  Aligned_cols=204  Identities=15%  Similarity=0.120  Sum_probs=120.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----CCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~~~d~V   76 (249)
                      ||+ |.||+++++.|. +|++|++++|+.......     ...+......+.++.+|++|.+++.++++.    .++|++
T Consensus         8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAA-----AKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            576 689999999996 899999999976442111     011111124678899999999988888764    269999


Q ss_pred             EecCCCCh-------------hhhHHHHHh----CCCCCeEEEeeccccccCCCC--------CCCCCCC--------C-
Q 025702           77 YDINGREA-------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDL--------LPHCETD--------T-  122 (249)
Q Consensus        77 i~~~~~~~-------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~--------~~~~e~~--------~-  122 (249)
                      ||++|...             .++..++++    ++...+.|++||.........        ...+...        + 
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD  160 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence            99998631             123333333    232345677777554321100        0000000        0 


Q ss_pred             --CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch---HHHHHHHHHcCCCeeecCCCcceEee
Q 025702          123 --VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       123 --~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                        ..+...| .+|...+.+.+       ..+++++.+.||.+..+.....+   .........+..++         ..+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~  231 (275)
T PRK06940        161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA---------GRP  231 (275)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc---------ccC
Confidence              0123346 89988766542       35789999999999877421100   01111112111111         135


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ...+|+|+++.+++...  ...|+.+.+.++..
T Consensus       232 ~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        232 GTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             CCHHHHHHHHHHHcCcccCcccCceEEEcCCeE
Confidence            67899999999998653  33677888877653

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.38  E-value=8.4e-12  Score=99.81  Aligned_cols=183  Identities=22%  Similarity=0.227  Sum_probs=116.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||.++++.|.++|++|++++|+........     ..+. ....+..+.+|++|.+++.++++.     ..+|+
T Consensus        15 tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~-----~~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   88 (296)
T PRK05872         15 TGAARGIGAELARRLHARGAKLALVDLEEAELAALA-----AELG-GDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV   88 (296)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHhc-CCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421100     0000 023456667999999988877653     26899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||++|...                    .+...++++    +. +..++|++||...+...           .....| 
T Consensus        89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  157 (296)
T PRK05872         89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA-----------PGMAAYC  157 (296)
T ss_pred             EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC-----------CCchHHH
Confidence            999998621                    112223333    22 34689999997765321           122345 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH-HHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      .+|...+.+.+       ..++.++.+.|+++..+........ ..........+.       ....++..+|++++++.
T Consensus       158 asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~-------p~~~~~~~~~va~~i~~  230 (296)
T PRK05872        158 ASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPW-------PLRRTTSVEKCAAAFVD  230 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCC-------cccCCCCHHHHHHHHHH
Confidence            88988877653       3578999999999877632110000 111112111111       11245679999999999


Q ss_pred             HhcCCC
Q 025702          202 VLGNEK  207 (249)
Q Consensus       202 ~~~~~~  207 (249)
                      ++....
T Consensus       231 ~~~~~~  236 (296)
T PRK05872        231 GIERRA  236 (296)
T ss_pred             HHhcCC
Confidence            998753

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1.9e-11  Score=95.85  Aligned_cols=198  Identities=10%  Similarity=0.063  Sum_probs=121.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhC-CCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~   78 (249)
                      |||+|.+|+++++.|+++|++|++++|++.+.....     ..+.. ...++.++.+|++|++++.++++.. ++|.+||
T Consensus        13 tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~   87 (259)
T PRK06125         13 TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALA-----ADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVN   87 (259)
T ss_pred             eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----HHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            699999999999999999999999999865422100     01111 1346788999999999998888743 6999999


Q ss_pred             cCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           79 INGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        79 ~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      +++...                    .+    ++.++..+.  +..++|++||....           .+......| .+
T Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~y~as  156 (259)
T PRK06125         88 NAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-----------NPDADYICGSAG  156 (259)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc-----------CCCCCchHhHHH
Confidence            987521                    11    222333333  34689999875431           111223345 77


Q ss_pred             hHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcC---CC--eeecCCCcceEeeeeHHHHHHHH
Q 025702          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP--IPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       132 k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      |...+.+.+       ..+++++.+.||.+..+.     ...+.......   ..  ............+..++|+|+++
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR-----MLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV  231 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHH-----HHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHH
Confidence            877666543       357899999999887762     11111000000   00  00000000112356789999999


Q ss_pred             HHHhcCC--CCCCceEEecCCc
Q 025702          200 VQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++++...  ...|..+.+.+|.
T Consensus       232 ~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        232 AFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHcCchhccccCceEEecCCe
Confidence            9998753  2367788887764

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.37  E-value=4.7e-11  Score=93.54  Aligned_cols=194  Identities=14%  Similarity=0.075  Sum_probs=119.4

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCC-C-----CCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-P-----GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~-----~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-   71 (249)
                      |||+|  .||+++++.|+++|++|++++|......... .     ......+......+.++.+|++|.+++.++++.. 
T Consensus        12 tGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~   91 (256)
T PRK12859         12 TGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVT   91 (256)
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            68985  7999999999999999998865422110000 0     0001122222456788899999999888877532 


Q ss_pred             ----CCcEEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCC
Q 025702           72 ----GFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (249)
Q Consensus        72 ----~~d~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (249)
                          .+|++||+++....                    +    ++.++..++  +..++|++||.....           
T Consensus        92 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------  160 (256)
T PRK12859         92 EQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG-----------  160 (256)
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC-----------
Confidence                48999999885211                    1    222344443  356999999976431           


Q ss_pred             CCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      +..+...| .+|...+.+.+       ..+++++.++||.+-.+....    ..........+         ...+...+
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----~~~~~~~~~~~---------~~~~~~~~  227 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----EIKQGLLPMFP---------FGRIGEPK  227 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----HHHHHHHhcCC---------CCCCcCHH
Confidence            11233446 88888776642       357899999999987653211    11111111111         11234589


Q ss_pred             HHHHHHHHHhcCC--CCCCceEEecCC
Q 025702          194 DLARAFVQVLGNE--KASRQVFNISGE  218 (249)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (249)
                      |+++++.+++...  ...|+.+.+.++
T Consensus       228 d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        228 DAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHHHHHHHHhCccccCccCcEEEeCCC
Confidence            9999999988653  235677776665

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.36  E-value=8.9e-12  Score=98.01  Aligned_cols=175  Identities=16%  Similarity=0.154  Sum_probs=111.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----CCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~~~d~V   76 (249)
                      |||+|++|.++++.|+++|++|++++|++.......     .++ ....++.++.+|+.|.+++..+++.    ..+|+|
T Consensus        11 tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l   84 (263)
T PRK09072         11 TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALA-----ARL-PYPGRHRWVVADLTSEAGREAVLARAREMGGINVL   84 (263)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence            699999999999999999999999999865421110     011 1135788999999999888777653    268999


Q ss_pred             EecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           77 YDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        77 i~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      ||+++...                    .++..++++    +.  +..++|++||...+...           .....| 
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~  153 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY-----------PGYASYC  153 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC-----------CCccHHH
Confidence            99988631                    122333333    22  34678888875542110           112335 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|...+.+.+       ..+++++.+.|+.+.++...         ....  ...    ......+..++|+|++++.+
T Consensus       154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~---------~~~~--~~~----~~~~~~~~~~~~va~~i~~~  218 (263)
T PRK09072        154 ASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS---------EAVQ--ALN----RALGNAMDDPEDVAAAVLQA  218 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh---------hhcc--ccc----ccccCCCCCHHHHHHHHHHH
Confidence            78877655442       35688999999987665310         0000  000    00011356789999999999


Q ss_pred             hcCCC
Q 025702          203 LGNEK  207 (249)
Q Consensus       203 ~~~~~  207 (249)
                      +++..
T Consensus       219 ~~~~~  223 (263)
T PRK09072        219 IEKER  223 (263)
T ss_pred             HhCCC
Confidence            98764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.36  E-value=9.7e-12  Score=110.11  Aligned_cols=171  Identities=16%  Similarity=0.182  Sum_probs=117.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.+|.++++.|+++|++|++++|++.......     ..+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus       377 tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        377 TGASSGIGRATAIKVAEAGATVFLVARNGEALDELV-----AEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421110     111112356889999999999888877632     6999


Q ss_pred             EEecCCCCh-----------h-----------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA-----------D-----------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~-----------~-----------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||++|...           .           +    ++.++..++  +..++|++||...+...           ....
T Consensus       452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~  520 (657)
T PRK07201        452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA-----------PRFS  520 (657)
T ss_pred             EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----------CCcc
Confidence            999998521           0           0    122333343  45799999998876431           1223


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..++++++++||.+..+.....            ...   .    ....+..+++|+.+
T Consensus       521 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------------~~~---~----~~~~~~~~~~a~~i  581 (657)
T PRK07201        521 AYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------------KRY---N----NVPTISPEEAADMV  581 (657)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------------ccc---c----CCCCCCHHHHHHHH
Confidence            45 88988877653       3579999999999987742110            000   0    11346789999999


Q ss_pred             HHHhcCC
Q 025702          200 VQVLGNE  206 (249)
Q Consensus       200 ~~~~~~~  206 (249)
                      +..+...
T Consensus       582 ~~~~~~~  588 (657)
T PRK07201        582 VRAIVEK  588 (657)
T ss_pred             HHHHHhC
Confidence            9988654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.35  E-value=2.6e-11  Score=91.34  Aligned_cols=161  Identities=16%  Similarity=0.195  Sum_probs=108.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|.+|.++++.|.++ ++|++++|++.                      .+.+|++|.++++++++.. ++|++||+
T Consensus         6 tGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~id~lv~~   62 (199)
T PRK07578          6 IGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------DVQVDITDPASIRALFEKVGKVDAVVSA   62 (199)
T ss_pred             EcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence            699999999999999999 99999998742                      2578999999998888754 79999999


Q ss_pred             CCCCh--------------------hhhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHH
Q 025702           80 NGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (249)
Q Consensus        80 ~~~~~--------------------~~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (249)
                      +|...                    .+..++++++    .+..+++++||....           .+......| .+|..
T Consensus        63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~Y~~sK~a  131 (199)
T PRK07578         63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD-----------EPIPGGASAATVNGA  131 (199)
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC-----------CCCCCchHHHHHHHH
Confidence            98521                    1122334332    244678998875532           111223335 78877


Q ss_pred             HHHHHh------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          135 TESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       135 ~e~~~~------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      .+.+.+      ..+++++.+.||.+-.+..      .    .  +..+  .+     ..++..+|+|+++..+++... 
T Consensus       132 ~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~------~----~--~~~~--~~-----~~~~~~~~~a~~~~~~~~~~~-  191 (199)
T PRK07578        132 LEGFVKAAALELPRGIRINVVSPTVLTESLE------K----Y--GPFF--PG-----FEPVPAARVALAYVRSVEGAQ-  191 (199)
T ss_pred             HHHHHHHHHHHccCCeEEEEEcCCcccCchh------h----h--hhcC--CC-----CCCCCHHHHHHHHHHHhccce-
Confidence            666543      3578899999988754410      0    0  0001  11     135789999999999998653 


Q ss_pred             CCceEEe
Q 025702          209 SRQVFNI  215 (249)
Q Consensus       209 ~~~~~~i  215 (249)
                      .|++|++
T Consensus       192 ~g~~~~~  198 (199)
T PRK07578        192 TGEVYKV  198 (199)
T ss_pred             eeEEecc
Confidence            5667664

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.34  E-value=2.4e-11  Score=96.05  Aligned_cols=180  Identities=17%  Similarity=0.151  Sum_probs=110.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      |||+|.+|.++++.|+++|++|+++.|+........     ..+... ...+.++.+|+.|++++.++++.     .++|
T Consensus         6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQTV-----ADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999998764321110     011111 12345578999999888776653     2589


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC---CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +|||++|...                    .+...++++    +.   ...++|++||...+..           .....
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~-----------~~~~~  149 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA-----------LPWHA  149 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC-----------CCCCc
Confidence            9999998521                    112233333    22   2468999998654311           11122


Q ss_pred             cc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcch------HHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       128 ~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      .| .+|...+.+.       ...++++++++||.+.++......      ..........          ......+..+
T Consensus       150 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~  219 (272)
T PRK07832        150 AYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFRGHAVTPE  219 (272)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hcccCCCCHH
Confidence            34 7786555443       246799999999999887421100      0000000000          0012347899


Q ss_pred             HHHHHHHHHhcCC
Q 025702          194 DLARAFVQVLGNE  206 (249)
Q Consensus       194 D~a~~~~~~~~~~  206 (249)
                      |+|++++.++..+
T Consensus       220 ~vA~~~~~~~~~~  232 (272)
T PRK07832        220 KAAEKILAGVEKN  232 (272)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999999653

>PRK05855 short chain dehydrogenase; Validated

Probab=99.34  E-value=4.7e-12  Score=110.49  Aligned_cols=185  Identities=15%  Similarity=0.048  Sum_probs=117.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|.++|++|++++|+.......     ...+.....++.++.+|++|.+++.++++..     .+|+
T Consensus       321 ~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        321 TGAGSGIGRETALAFAREGAEVVASDIDEAAAERT-----AELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            69999999999999999999999999986542111     0111112346889999999999988887642     5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||++|...                    .+..++.++    +.  + ..++|++||...+...           .....
T Consensus       396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~~~  464 (582)
T PRK05855        396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS-----------RSLPA  464 (582)
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-----------CCCcH
Confidence            999998631                    112223332    22  2 3589999998876432           12334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHH----HHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW----FFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      | .+|...+.+.+       +.+++++.++||.+-.+.........    ......... ...+     .......+|+|
T Consensus       465 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~p~~va  538 (582)
T PRK05855        465 YATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRA-DKLY-----QRRGYGPEKVA  538 (582)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhh-hhhc-----cccCCCHHHHH
Confidence            5 89988776642       35899999999988765321110000    000000000 0000     01124679999


Q ss_pred             HHHHHHhcCCC
Q 025702          197 RAFVQVLGNEK  207 (249)
Q Consensus       197 ~~~~~~~~~~~  207 (249)
                      +++++++.++.
T Consensus       539 ~~~~~~~~~~~  549 (582)
T PRK05855        539 KAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHcCC
Confidence            99999998865

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.34  E-value=6.5e-11  Score=90.71  Aligned_cols=161  Identities=17%  Similarity=0.087  Sum_probs=107.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh---CCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~---~~~d~Vi   77 (249)
                      |||+|.+|+++++.|+++|++|++++|++.+... +        .  ..+++++.+|++|.+.+.++++.   .++|+||
T Consensus         7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~-~--------~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          7 VGASRGIGREFVRQYRADGWRVIATARDAAALAA-L--------Q--ALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             EcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH-H--------H--hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            6999999999999999999999999998654211 1        1  13467889999999988876532   3589999


Q ss_pred             ecCCCCh----------------------hhhHHHHHhC----C-CCCeEEEeeccc-cccCCCCCCCCCCCCCCCCCcc
Q 025702           78 DINGREA----------------------DEVEPILDAL----P-NLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        78 ~~~~~~~----------------------~~~~~~~~a~----~-~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |+++...                      .++..+++++    . ...+++++||.. .++..         +..+...|
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~~Y  146 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------TGTTGWLY  146 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------cCCCcccc
Confidence            9987631                      1233344442    2 235788888754 33321         11122235


Q ss_pred             -cchHHHHHHHhh-----cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          130 -KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       130 -~~k~~~e~~~~~-----~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                       .+|...+.+++.     .+++++.++|+++..+...                     +    ...+..++.++.++.++
T Consensus       147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~----~~~~~~~~~~~~~~~~~  201 (222)
T PRK06953        147 RASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A----QAALDPAQSVAGMRRVI  201 (222)
T ss_pred             HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C----CCCCCHHHHHHHHHHHH
Confidence             889888877643     3567899999988776310                     0    11345788888888877


Q ss_pred             cCC
Q 025702          204 GNE  206 (249)
Q Consensus       204 ~~~  206 (249)
                      ...
T Consensus       202 ~~~  204 (222)
T PRK06953        202 AQA  204 (222)
T ss_pred             Hhc
Confidence            543

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.33  E-value=4.8e-11  Score=92.49  Aligned_cols=171  Identities=14%  Similarity=0.073  Sum_probs=106.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCC--HHHHHHhhh----h--C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKD--YDFVKSSLS----A--K   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d--~~~l~~~~~----~--~   71 (249)
                      |||+|++|+++++.|+++|++|++++|++.......     .++.. ....+.++.+|+.+  .+++.++++    .  .
T Consensus        12 tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~   86 (239)
T PRK08703         12 TGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVY-----DAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQG   86 (239)
T ss_pred             ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHH-----HHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCC
Confidence            699999999999999999999999999875421100     01100 12346677889865  334443332    1  2


Q ss_pred             CCcEEEecCCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           72 GFDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        72 ~~d~Vi~~~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      .+|+|||+++...                     .+...++++    +.  +..++|++||....           .+..
T Consensus        87 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-----------~~~~  155 (239)
T PRK08703         87 KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-----------TPKA  155 (239)
T ss_pred             CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----------cCCC
Confidence            6899999998420                     112223333    33  45689999985432           1111


Q ss_pred             CCCcc-cchHHHHHHHhh-------c-CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLES-------K-GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~~-------~-~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ....| .+|...+.+++.       . +++++.++||.+++|......         .       +  .....+...+|+
T Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~---------~-------~--~~~~~~~~~~~~  217 (239)
T PRK08703        156 YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH---------P-------G--EAKSERKSYGDV  217 (239)
T ss_pred             CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC---------C-------C--CCccccCCHHHH
Confidence            22345 899888877531       2 588999999999998421100         0       0  111234578999


Q ss_pred             HHHHHHHhcC
Q 025702          196 ARAFVQVLGN  205 (249)
Q Consensus       196 a~~~~~~~~~  205 (249)
                      +..+.+++..
T Consensus       218 ~~~~~~~~~~  227 (239)
T PRK08703        218 LPAFVWWASA  227 (239)
T ss_pred             HHHHHHHhCc
Confidence            9999999974

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.33  E-value=2.3e-11  Score=98.56  Aligned_cols=191  Identities=19%  Similarity=0.183  Sum_probs=115.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhC--CCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAK--GFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~--~~d~Vi   77 (249)
                      +||||.+|+.+++.|+++|+.|++++|+.......+...      ....+...+..+... .+.+..+.+..  ...+++
T Consensus        85 vGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~------~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~  158 (411)
T KOG1203|consen   85 VGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVF------FVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVI  158 (411)
T ss_pred             ecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhccc------ccccccceeeeccccccchhhhhhhhccccceeEE
Confidence            599999999999999999999999999988854433200      001233444444433 33334444322  233555


Q ss_pred             ecCCC-------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCC-CCCcccchHHHHHHHhh
Q 025702           78 DINGR-------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKGKLNTESVLES  141 (249)
Q Consensus        78 ~~~~~-------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~-~~~~~~~k~~~e~~~~~  141 (249)
                      .+++.             +-.+++++++||+  +++|++++|+.+.-....     +..... ....+.+|..+|+++++
T Consensus       159 ~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~-----~~~~~~~~~~~~~~k~~~e~~~~~  233 (411)
T KOG1203|consen  159 KGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQ-----PPNILLLNGLVLKAKLKAEKFLQD  233 (411)
T ss_pred             ecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCC-----CchhhhhhhhhhHHHHhHHHHHHh
Confidence            44432             1236899999988  999999999877521100     000011 11223778899999999


Q ss_pred             cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC
Q 025702          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (249)
Q Consensus       142 ~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (249)
                      .+++++|+|++...-.......      ......+....+++..  ..+.-.|+|+.++.++.++....
T Consensus       234 Sgl~ytiIR~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  234 SGLPYTIIRPGGLEQDTGGQRE------VVVDDEKELLTVDGGA--YSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             cCCCcEEEeccccccCCCCcce------ecccCccccccccccc--eeeehhhHHHHHHHHHhhhhhcc
Confidence            9999999999976543110000      0001111111122111  46778999999999998876544

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.33  E-value=3.4e-11  Score=92.50  Aligned_cols=139  Identities=19%  Similarity=0.164  Sum_probs=94.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh---CCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~---~~~d~Vi   77 (249)
                      |||+|++|+++++.|+++|++|++++|++..... ..        . ..++.++.+|+.|.++++++++.   .++|+||
T Consensus         7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~--------~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-LQ--------A-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-HH--------h-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            7999999999999999999999999998765321 10        0 23677888999999888777763   3699999


Q ss_pred             ecCCCChh----------------------hhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           78 DINGREAD----------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        78 ~~~~~~~~----------------------~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |+++....                      +...+.++    ++ +...++++||..  |....      .+..+...| 
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~------~~~~~~~~Y~  148 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVEL------PDGGEMPLYK  148 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccccc------CCCCCccchH
Confidence            99875210                      12223333    33 335788888643  22110      111223345 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCC
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~  157 (249)
                      .+|...+.+.+       ..+++++.++||.+-.+
T Consensus       149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            88988887764       24678999999988666

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.32  E-value=2.8e-11  Score=92.79  Aligned_cols=173  Identities=14%  Similarity=0.133  Sum_probs=114.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC--CCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--~~d~Vi~   78 (249)
                      |||+|.+|+++++.|.++|++|+++.|+..+......          ..+++++.+|+.|.++++++++..  .+|++||
T Consensus         6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK----------ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            6999999999999999999999999998654211100          124678899999999998887632  5899999


Q ss_pred             cCCCC----------h----hh---------------hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           79 INGRE----------A----DE---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        79 ~~~~~----------~----~~---------------~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +++..          .    ..               ++.++..++...++|++||...               .....|
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------------~~~~~Y  140 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------------PAGSAE  140 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------------CCcccc
Confidence            97631          0    01               1112222333368999987530               112335


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.+.||.+..+..         ... ..  .          +.-.++|+++++.+
T Consensus       141 ~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~---------~~~-~~--~----------p~~~~~~ia~~~~~  198 (223)
T PRK05884        141 AAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY---------DGL-SR--T----------PPPVAAEIARLALF  198 (223)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh---------hhc-cC--C----------CCCCHHHHHHHHHH
Confidence             88987776652       3578999999998865520         000 00  0          01157999999999


Q ss_pred             HhcCC--CCCCceEEecCCcc
Q 025702          202 VLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++...  ...|+.+.+.+|..
T Consensus       199 l~s~~~~~v~G~~i~vdgg~~  219 (223)
T PRK05884        199 LTTPAARHITGQTLHVSHGAL  219 (223)
T ss_pred             HcCchhhccCCcEEEeCCCee
Confidence            98753  23577787777653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.31  E-value=5.5e-11  Score=95.55  Aligned_cols=205  Identities=14%  Similarity=0.076  Sum_probs=125.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----CCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~~~d~V   76 (249)
                      |||+|+||++++++|+++|++|++.++.........    ...+.....++.++.+|+.|.+.+.++++.    -++|++
T Consensus        18 TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~----~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~l   93 (306)
T PRK07792         18 TGAAAGLGRAEALGLARLGATVVVNDVASALDASDV----LDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIV   93 (306)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHH----HHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            799999999999999999999999987643211110    011222235688899999999888887763    268999


Q ss_pred             EecCCCChh--------------------hhHHHHHhC----C-C--------CCeEEEeeccccccCCCCCCCCCCCCC
Q 025702           77 YDINGREAD--------------------EVEPILDAL----P-N--------LEQFIYCSSAGVYLKSDLLPHCETDTV  123 (249)
Q Consensus        77 i~~~~~~~~--------------------~~~~~~~a~----~-~--------~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (249)
                      ||++|....                    +...+++++    + +        ..++|++||...+...           
T Consensus        94 i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  162 (306)
T PRK07792         94 VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP-----------  162 (306)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC-----------
Confidence            999986311                    122233321    1 1        2489999986653211           


Q ss_pred             CCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      .....| .+|...+.+.+       ..+++++.+.|+. ..+     +.....    .......    .....++.++|+
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~-----~~~~~~----~~~~~~~----~~~~~~~~pe~v  228 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA-----MTADVF----GDAPDVE----AGGIDPLSPEHV  228 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc-----hhhhhc----cccchhh----hhccCCCCHHHH
Confidence            112235 89988877652       3578888888862 111     111110    0000000    011234578999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCC------------------ccccHHHHHHHHHHHh
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGE------------------KYVTFDGLARACAKVT  234 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~------------------~~~s~~~l~~~~~~~~  234 (249)
                      +.++.+++...  ...|++|.+.++                  ...+..++.+.+.+.+
T Consensus       229 a~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        229 VPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             HHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence            99999988653  235667766543                  3356677777777774

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.30  E-value=5.6e-11  Score=92.26  Aligned_cols=185  Identities=12%  Similarity=0.101  Sum_probs=113.8

Q ss_pred             HHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC--CCcEEEecCCCC-----
Q 025702           11 LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYDINGRE-----   83 (249)
Q Consensus        11 l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--~~d~Vi~~~~~~-----   83 (249)
                      ++++|+++|++|++++|+....                ...+++.+|++|.+++.++++..  ++|+|||++|..     
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM----------------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPV   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh----------------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCH
Confidence            4788999999999999986541                11346789999999999888743  699999999852     


Q ss_pred             -------hhhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCC----------------CCCCCCCcc-cchHHH
Q 025702           84 -------ADEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCET----------------DTVDPKSRH-KGKLNT  135 (249)
Q Consensus        84 -------~~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~----------------~~~~~~~~~-~~k~~~  135 (249)
                             ..+...++++    +++..++|++||...++.....+..+.                .+..+...| .+|...
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~  144 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEAL  144 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHH
Confidence                   1223334443    333469999999988753221111110                122233456 899877


Q ss_pred             HHHH--------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC
Q 025702          136 ESVL--------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       136 e~~~--------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (249)
                      +.+.        ...+++++.++||.+.++.... ...............       ....+...+|+|+++++++....
T Consensus       145 ~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~pe~va~~~~~l~s~~~  216 (241)
T PRK12428        145 ILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD-FRSMLGQERVDSDAK-------RMGRPATADEQAAVLVFLCSDAA  216 (241)
T ss_pred             HHHHHHHHHHhhhccCeEEEEeecCCccCccccc-chhhhhhHhhhhccc-------ccCCCCCHHHHHHHHHHHcChhh
Confidence            6543        2357899999999998885211 110000000000000       01124668999999999886432


Q ss_pred             --CCCceEEecCCc
Q 025702          208 --ASRQVFNISGEK  219 (249)
Q Consensus       208 --~~~~~~~i~~~~  219 (249)
                        ..|+.+.+.++.
T Consensus       217 ~~~~G~~i~vdgg~  230 (241)
T PRK12428        217 RWINGVNLPVDGGL  230 (241)
T ss_pred             cCccCcEEEecCch
Confidence              356667666653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.28  E-value=5.1e-10  Score=88.39  Aligned_cols=194  Identities=13%  Similarity=0.148  Sum_probs=118.3

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||++  -||++++++|+++|++|++..|+.... ...     ..+.........+.+|++|.++++++++.     -++
T Consensus        13 TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~-~~~-----~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (271)
T PRK06505         13 MGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG-KRV-----KPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL   86 (271)
T ss_pred             eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH-HHH-----HHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            68886  899999999999999999998864221 000     01100012234678999999988877753     269


Q ss_pred             cEEEecCCCCh-------------h-----------h----hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA-------------D-----------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~-------------~-----------~----~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||++|...             .           +    ++.++..+++..++|++||.....           +...
T Consensus        87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~-----------~~~~  155 (271)
T PRK06505         87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR-----------VMPN  155 (271)
T ss_pred             CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc-----------cCCc
Confidence            99999998531             0           0    111222233336899999865421           1111


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.+.||.+-.+..... -.........+..++         ..+..++|+|
T Consensus       156 ~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~peeva  226 (271)
T PRK06505        156 YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL---------RRTVTIDEVG  226 (271)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc---------cccCCHHHHH
Confidence            2235 88988776653       3579999999999877632110 000111111111111         1245689999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCcc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +++++++....  ..|+.+.+.++..
T Consensus       227 ~~~~fL~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        227 GSALYLLSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             HHHHHHhCccccccCceEEeecCCcc
Confidence            99999987532  3577888877653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.28  E-value=3.9e-10  Score=88.60  Aligned_cols=193  Identities=11%  Similarity=0.111  Sum_probs=117.3

Q ss_pred             CCC--cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~--tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||  ++-||+++++.|+++|++|++..|.... .+.+     ..+..-......+.+|+.|.+++.++++.     -++
T Consensus        12 TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   85 (261)
T PRK08690         12 TGMISERSIAYGIAKACREQGAELAFTYVVDKL-EERV-----RKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL   85 (261)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH-HHHH-----HHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            675  5689999999999999999988765321 1100     01110012345789999999988877753     269


Q ss_pred             cEEEecCCCCh---------h-----h---------------hHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA---------D-----E---------------VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (249)
Q Consensus        74 d~Vi~~~~~~~---------~-----~---------------~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (249)
                      |++||++|...         .     .               ++.++..++ +..++|++||...+.           +.
T Consensus        86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~-----------~~  154 (261)
T PRK08690         86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR-----------AI  154 (261)
T ss_pred             cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc-----------CC
Confidence            99999997631         0     0               011112222 335799998866431           11


Q ss_pred             CCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      .....| .+|...+.+.+       ..+++++.+.||.+-.+.... .-.........+..++         ..+..++|
T Consensus       155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pee  225 (261)
T PRK08690        155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL---------RRNVTIEE  225 (261)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC---------CCCCCHHH
Confidence            122345 88988776643       467999999999987663111 0011111111121111         13566899


Q ss_pred             HHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +|+++.+++....  ..|+.+.+.+|.
T Consensus       226 vA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        226 VGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHHHhCcccCCcceeEEEEcCCc
Confidence            9999999998542  367788777764

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.27  E-value=5.8e-12  Score=97.78  Aligned_cols=192  Identities=23%  Similarity=0.286  Sum_probs=125.4

Q ss_pred             CCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh------CCC
Q 025702            2 GGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGF   73 (249)
Q Consensus         2 G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~------~~~   73 (249)
                      |++  +-||++++++|+++|++|++.+|+..+....+.     .+.+ ..+.+++.+|++|++.+.++++.      -++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~-----~l~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~i   74 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALE-----ELAK-EYGAEVIQCDLSDEESVEALFDEAVERFGGRI   74 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHH-----HHHH-HTTSEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-----HHHH-HcCCceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence            566  889999999999999999999999875211110     1111 12345699999999888887653      379


Q ss_pred             cEEEecCCCChh------------------------h----hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~----~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||+++....                        .    .+.++..+++..++|++||.....           +...
T Consensus        75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~-----------~~~~  143 (241)
T PF13561_consen   75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR-----------PMPG  143 (241)
T ss_dssp             SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS-----------BSTT
T ss_pred             EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc-----------cCcc
Confidence            999999765321                        0    222333333446899999876521           1122


Q ss_pred             CCcc-cchHHHHHHHh-------h-cCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~-~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ...| .+|...+.+.+       . .++++..+.||.+..+.... .....+.....+..++.         .+..++|+
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------r~~~~~ev  214 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLG---------RLGTPEEV  214 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTS---------SHBEHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccC---------CCcCHHHH
Confidence            2345 88888877652       4 68999999999987663100 01223344444443331         23468999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCc
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      |+++.++++..  .-.|+++.+.+|.
T Consensus       215 A~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  215 ANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHhCccccCccCCeEEECCCc
Confidence            99999999864  4478888888764

...

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.27  E-value=9.3e-11  Score=83.04  Aligned_cols=132  Identities=20%  Similarity=0.168  Sum_probs=98.7

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +||||-+|+.+++.+++++  -+|+++.|......+.            ...+.....|....+++...++  ++|+.|+
T Consensus        24 lGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------------~k~v~q~~vDf~Kl~~~a~~~q--g~dV~Fc   89 (238)
T KOG4039|consen   24 LGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------------DKVVAQVEVDFSKLSQLATNEQ--GPDVLFC   89 (238)
T ss_pred             EeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------------cceeeeEEechHHHHHHHhhhc--CCceEEE
Confidence            5999999999999999997  4899999985332211            2456667788887777777777  9999999


Q ss_pred             cCCCC-------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcC
Q 025702           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKG  143 (249)
Q Consensus        79 ~~~~~-------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~  143 (249)
                      +.|..             .+....+.++++  +++.|+.+||.++.            +....-|-..|-++|+-+.+..
T Consensus        90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd------------~sSrFlY~k~KGEvE~~v~eL~  157 (238)
T KOG4039|consen   90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD------------PSSRFLYMKMKGEVERDVIELD  157 (238)
T ss_pred             eecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC------------cccceeeeeccchhhhhhhhcc
Confidence            86542             233555666666  89999999998872            1112222378888998887766


Q ss_pred             C-cEEEeecceeeCCC
Q 025702          144 V-NWTSLRPVYIYGPL  158 (249)
Q Consensus       144 ~-~~~~~r~~~v~g~~  158 (249)
                      + .++|+|||.+.|..
T Consensus       158 F~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  158 FKHIIILRPGPLLGER  173 (238)
T ss_pred             ccEEEEecCcceeccc
Confidence            6 58999999999965

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.27  E-value=3.9e-10  Score=88.44  Aligned_cols=196  Identities=11%  Similarity=0.050  Sum_probs=118.7

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+  +-||++++++|.++|++|++..|+.+....  . ....++.+....+.++.+|++|++++.++++..     ++
T Consensus        12 tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (258)
T PRK07370         12 TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRF--E-KKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKL   88 (258)
T ss_pred             eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchH--H-HHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCC
Confidence            6875  689999999999999999888765432100  0 000111111234678899999999888777642     69


Q ss_pred             cEEEecCCCCh-----h-------------------h----hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA-----D-------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~-----~-------------------~----~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||++|...     .                   +    ++.++..+++..++|++||.....           +...
T Consensus        89 D~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----------~~~~  157 (258)
T PRK07370         89 DILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-----------AIPN  157 (258)
T ss_pred             CEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-----------CCcc
Confidence            99999998531     0                   1    122333333346899999865421           1112


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.+.||.+-.+.... .-.+..........+         ...+...+|++
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva  228 (258)
T PRK07370        158 YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP---------LRRTVTQTEVG  228 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC---------cCcCCCHHHHH
Confidence            2345 88988777653       357899999999987763110 000111111111111         12355689999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++.+++..+.  ..|+.+.+.++.
T Consensus       229 ~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        229 NTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHHHHHhChhhccccCcEEEECCcc
Confidence            99999987532  357777776654

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.27  E-value=6.7e-10  Score=80.05  Aligned_cols=196  Identities=16%  Similarity=0.185  Sum_probs=126.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcccc---CCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+.-||+++++.|.++|++|.+.+++.....+   .++.         ..+-.-+.+|+.+.+.+...+++.     .
T Consensus        20 tGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---------~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   20 TGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---------YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             ecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---------CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            6888889999999999999999999998775321   2211         235566789999887777666532     6


Q ss_pred             CcEEEecCCCChhh------------------------hHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREADE------------------------VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        73 ~d~Vi~~~~~~~~~------------------------~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      +++++||||.+.+.                        ++..++++.    +.-++|.+||.-  |...+.....-...+
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIV--GkiGN~GQtnYAAsK  168 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIV--GKIGNFGQTNYAASK  168 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhh--cccccccchhhhhhc
Confidence            99999999985432                        233344421    233899999733  221111111111111


Q ss_pred             CCCcccchHHHHHHHhhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          125 PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       125 ~~~~~~~k~~~e~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      ..-..-+|.++.+.. ..++++..+.||+|-.|. ...+.+..+..+...-|+...|+         .+|+|.++.++..
T Consensus       169 ~GvIgftktaArEla-~knIrvN~VlPGFI~tpM-T~~mp~~v~~ki~~~iPmgr~G~---------~EevA~~V~fLAS  237 (256)
T KOG1200|consen  169 GGVIGFTKTAARELA-RKNIRVNVVLPGFIATPM-TEAMPPKVLDKILGMIPMGRLGE---------AEEVANLVLFLAS  237 (256)
T ss_pred             CceeeeeHHHHHHHh-hcCceEeEeccccccChh-hhhcCHHHHHHHHccCCccccCC---------HHHHHHHHHHHhc
Confidence            111113455555554 457999999999998884 33445566777777777655554         7999999999886


Q ss_pred             CCCC--CCceEEecCC
Q 025702          205 NEKA--SRQVFNISGE  218 (249)
Q Consensus       205 ~~~~--~~~~~~i~~~  218 (249)
                      ....  .|..+-+++|
T Consensus       238 ~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  238 DASSYITGTTLEVTGG  253 (256)
T ss_pred             cccccccceeEEEecc
Confidence            5432  4556666665

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.26  E-value=1.3e-10  Score=90.45  Aligned_cols=172  Identities=14%  Similarity=0.130  Sum_probs=106.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccC--CHHHHHHhhhh-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRK--DYDFVKSSLSA-----KG   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~--d~~~l~~~~~~-----~~   72 (249)
                      |||+|++|.++++.|++.|++|++++|+........     .++.. ....+.++.+|++  +.+.+.++++.     .+
T Consensus        18 tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   92 (247)
T PRK08945         18 TGAGDGIGREAALTYARHGATVILLGRTEEKLEAVY-----DEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR   92 (247)
T ss_pred             eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence            699999999999999999999999999865421110     01111 1235677778885  55555444431     26


Q ss_pred             CcEEEecCCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        73 ~d~Vi~~~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +|+|||+++...                     .+...++++    +.  +.++||++||......           ...
T Consensus        93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~  161 (247)
T PRK08945         93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG-----------RAN  161 (247)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC-----------CCC
Confidence            899999987521                     122223333    33  5679999998654311           112


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ...| .+|...+.+++       ..+++++.++|+.+-++.....+         ...         ....+...+|+++
T Consensus       162 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~---------~~~---------~~~~~~~~~~~~~  223 (247)
T PRK08945        162 WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF---------PGE---------DPQKLKTPEDIMP  223 (247)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc---------Ccc---------cccCCCCHHHHHH
Confidence            2345 88988877653       23678888999887665210000         000         0113567899999


Q ss_pred             HHHHHhcCC
Q 025702          198 AFVQVLGNE  206 (249)
Q Consensus       198 ~~~~~~~~~  206 (249)
                      .+.+++...
T Consensus       224 ~~~~~~~~~  232 (247)
T PRK08945        224 LYLYLMGDD  232 (247)
T ss_pred             HHHHHhCcc
Confidence            999988654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.26  E-value=7.3e-10  Score=86.84  Aligned_cols=194  Identities=10%  Similarity=0.065  Sum_probs=118.0

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhh-----CC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~-----~~   72 (249)
                      |||+  +-||.+++++|.++|++|++..|+.... +.+    +....+. ..++.++.+|++|++++.++++.     -+
T Consensus        13 tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~----~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (257)
T PRK08594         13 MGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEV----RELADTLEGQESLLLPCDVTSDEEITACFETIKEEVGV   87 (257)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHH----HHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCC
Confidence            6886  7899999999999999999988753221 000    0000111 24678889999999888777753     25


Q ss_pred             CcEEEecCCCCh-----h-------------------h----hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA-----D-------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        73 ~d~Vi~~~~~~~-----~-------------------~----~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      +|++||+++...     .                   .    .+.++..+.+..++|++||....-           +..
T Consensus        88 ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~~~  156 (257)
T PRK08594         88 IHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER-----------VVQ  156 (257)
T ss_pred             ccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----------CCC
Confidence            899999987421     0                   0    111222233346899999865421           111


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ....| .+|...+.+.+       ..+++++.+.||.+-.+.... .-.........+..+         ...+..++|+
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~~v  227 (257)
T PRK08594        157 NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAP---------LRRTTTQEEV  227 (257)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCC---------ccccCCHHHH
Confidence            22345 88988777653       357999999999887652100 000011111111111         1234668999


Q ss_pred             HHHHHHHhcCCC--CCCceEEecCCc
Q 025702          196 ARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++++++++....  ..|+.+.+.++.
T Consensus       228 a~~~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        228 GDTAAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             HHHHHHHcCcccccccceEEEECCch
Confidence            999999987532  357777776653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.26  E-value=2.3e-10  Score=91.03  Aligned_cols=196  Identities=16%  Similarity=0.126  Sum_probs=118.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcc-----ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-----AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----   70 (249)
                      |||++.||+++++.|+++|++|++++|+....     ...+. .....+......+.++.+|++|.+++.++++.     
T Consensus        12 TGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (286)
T PRK07791         12 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQ-AVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETF   90 (286)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHH-HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999999999998765110     00000 00011111234677889999998888777653     


Q ss_pred             CCCcEEEecCCCCh--------------------hh----hHHHHHhCC-C-------CCeEEEeeccccccCCCCCCCC
Q 025702           71 KGFDVVYDINGREA--------------------DE----VEPILDALP-N-------LEQFIYCSSAGVYLKSDLLPHC  118 (249)
Q Consensus        71 ~~~d~Vi~~~~~~~--------------------~~----~~~~~~a~~-~-------~~~~i~~Ss~~v~~~~~~~~~~  118 (249)
                      -++|++||++|...                    .+    ++.++..+. .       ..++|++||...+..       
T Consensus        91 g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-------  163 (286)
T PRK07791         91 GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG-------  163 (286)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC-------
Confidence            26899999988621                    01    122222222 1       248999998665311       


Q ss_pred             CCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeee
Q 025702          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                          ......| .+|...+.+.+       ..+++++.+.|+ +..+.     ............+     .  ....+.
T Consensus       164 ----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~-----~~~~~~~~~~~~~-----~--~~~~~~  226 (286)
T PRK07791        164 ----SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM-----TETVFAEMMAKPE-----E--GEFDAM  226 (286)
T ss_pred             ----CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc-----chhhHHHHHhcCc-----c--cccCCC
Confidence                1112345 88988776643       367899999997 43331     1111111111111     0  111345


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      .++|+++++++++...  ...|+.+.+.++...
T Consensus       227 ~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        227 APENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence            7899999999998753  336778888776643

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.25  E-value=1.3e-09  Score=84.31  Aligned_cols=178  Identities=15%  Similarity=0.100  Sum_probs=111.8

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi   77 (249)
                      |||+|+||++++++|+++|  +.|....|+....   ..          ..++.++++|++|.++++++.+.. ++|+||
T Consensus         6 tGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~~----------~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          6 VGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---FQ----------HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             ECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---cc----------cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            7999999999999999985  5666666654321   11          257888999999998877755432 789999


Q ss_pred             ecCCCChh------------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           78 DINGREAD------------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        78 ~~~~~~~~------------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++|....                              .++.++..++  +..+++++||..  +...     . .+..+
T Consensus        73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~-----~-~~~~~  144 (235)
T PRK09009         73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSIS-----D-NRLGG  144 (235)
T ss_pred             ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccc-----c-CCCCC
Confidence            99886310                              0122333344  346888888632  1110     0 01122


Q ss_pred             CCcc-cchHHHHHHHhh---------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          126 KSRH-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~~---------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ...| .+|...+.+.+.         .++++..+.||.+..+....         .....         ....+...+|+
T Consensus       145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~~---------~~~~~~~~~~~  206 (235)
T PRK09009        145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---------FQQNV---------PKGKLFTPEYV  206 (235)
T ss_pred             cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---------hhhcc---------ccCCCCCHHHH
Confidence            3345 889888776531         36788899999987764211         00111         11225678999


Q ss_pred             HHHHHHHhcCCC--CCCceEEecC
Q 025702          196 ARAFVQVLGNEK--ASRQVFNISG  217 (249)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~  217 (249)
                      |+.++.++....  ..|..+.+.+
T Consensus       207 a~~~~~l~~~~~~~~~g~~~~~~g  230 (235)
T PRK09009        207 AQCLLGIIANATPAQSGSFLAYDG  230 (235)
T ss_pred             HHHHHHHHHcCChhhCCcEEeeCC
Confidence            999999997753  2455665544

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.24  E-value=8.6e-10  Score=86.51  Aligned_cols=193  Identities=12%  Similarity=0.094  Sum_probs=117.5

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+  +-||.+++++|+++|++|++..|+..... .+     ..+..-...+.++.+|++|.+++.++++.     .++
T Consensus        16 tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~-----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l   89 (258)
T PRK07533         16 VGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YV-----EPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL   89 (258)
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HH-----HHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence            6887  48999999999999999999988753210 00     00000012356788999999888877653     268


Q ss_pred             cEEEecCCCCh-------------hh---------------hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA-------------DE---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~-------------~~---------------~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||+++...             ..               ++.++..+++..++|++||.....           +...
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-----------~~~~  158 (258)
T PRK07533         90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-----------VVEN  158 (258)
T ss_pred             CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-----------CCcc
Confidence            99999987521             00               122333343335899998865320           1112


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..++++..+.||.+-.+.... ...........+..++         ..+..++|++
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva  229 (258)
T PRK07533        159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL---------RRLVDIDDVG  229 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence            2335 88887766542       357899999999987653110 0011111222221111         1245689999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++++++...  ...|+.+.+.++.
T Consensus       230 ~~~~~L~s~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        230 AVAAFLASDAARRLTGNTLYIDGGY  254 (258)
T ss_pred             HHHHHHhChhhccccCcEEeeCCcc
Confidence            9999998753  2357777776653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.24  E-value=5.8e-10  Score=88.18  Aligned_cols=194  Identities=12%  Similarity=0.090  Sum_probs=117.6

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+  +-||+++++.|.++|++|++..|+... .+.+    +....+.... ..+.+|++|.+++.++++.     -++
T Consensus        11 tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~----~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~i   84 (274)
T PRK08415         11 VGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRV----EPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKI   84 (274)
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHH----HHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6886  679999999999999999999887421 0000    0000111223 5788999999988877753     268


Q ss_pred             cEEEecCCCCh-------------h-----------h----hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA-------------D-----------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~-------------~-----------~----~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||++|...             .           +    ++.++..+++..++|++||.....           +...
T Consensus        85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~-----------~~~~  153 (274)
T PRK08415         85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK-----------YVPH  153 (274)
T ss_pred             CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc-----------CCCc
Confidence            99999998521             0           0    222333344346899999865321           1111


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..++++..+.||.+..+.... .-............+         ...+..++|++
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------l~r~~~pedva  224 (274)
T PRK08415        154 YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAP---------LKKNVSIEEVG  224 (274)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCc---------hhccCCHHHHH
Confidence            2335 88987766542       357899999999987652110 000000000001111         11246689999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++++++...  ...|+.+.+.+|..
T Consensus       225 ~~v~fL~s~~~~~itG~~i~vdGG~~  250 (274)
T PRK08415        225 NSGMYLLSDLSSGVTGEIHYVDAGYN  250 (274)
T ss_pred             HHHHHHhhhhhhcccccEEEEcCccc
Confidence            9999999753  33677788877653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.22  E-value=1.3e-09  Score=85.35  Aligned_cols=192  Identities=15%  Similarity=0.133  Sum_probs=116.6

Q ss_pred             CCC--cccchHHHHHHHHHcCCeEEEEecCCCc-cccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CC
Q 025702            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (249)
Q Consensus         1 ~G~--tG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~   72 (249)
                      |||  ++-||.++++.|+++|++|++++|+... ..+.+       ..+....+.++.+|+.|++++.++++.     .+
T Consensus        13 tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~-------~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889         13 TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERI-------AKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHH-------HHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            687  7889999999999999999999886422 11110       011123577889999999988877753     26


Q ss_pred             CcEEEecCCCChh-------------h---------------hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREAD-------------E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        73 ~d~Vi~~~~~~~~-------------~---------------~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      +|++||++|....             .               ++.++..+++..++|++|+....            ...
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~------------~~~  153 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV------------AWP  153 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc------------cCC
Confidence            9999999886310             0               11223333333578888753210            111


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ....| .+|...+.+.+       ..+++++.+.||.+-.+..... -.........+..++        .+.+..++|+
T Consensus       154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~p~ev  225 (256)
T PRK07889        154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL--------GWDVKDPTPV  225 (256)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc--------ccccCCHHHH
Confidence            22335 88887766542       3678999999999877631100 001111111111111        0135678999


Q ss_pred             HHHHHHHhcCCC--CCCceEEecCCc
Q 025702          196 ARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      |+++++++....  ..|+.+.+.++.
T Consensus       226 A~~v~~l~s~~~~~~tG~~i~vdgg~  251 (256)
T PRK07889        226 ARAVVALLSDWFPATTGEIVHVDGGA  251 (256)
T ss_pred             HHHHHHHhCcccccccceEEEEcCce
Confidence            999999997642  357777776653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.20  E-value=1.5e-09  Score=85.20  Aligned_cols=193  Identities=10%  Similarity=0.052  Sum_probs=115.7

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||++  -||.++++.|.++|++|++..|+... .+..     ..+..-.....++.+|++|++++.++++.     .++
T Consensus        14 TGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~-~~~~-----~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603         14 TGIANNMSISWAIAQLAKKHGAELWFTYQSEVL-EKRV-----KPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             ECCCCCcchHHHHHHHHHHcCCEEEEEeCchHH-HHHH-----HHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            68886  69999999999999999998876321 1100     01110011234568999999988877753     259


Q ss_pred             cEEEecCCCCh-------------hh-----------hHHHHH----hCCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA-------------DE-----------VEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~-------------~~-----------~~~~~~----a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||+++...             ..           ...++.    .+++..++|++||.....           +...
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~-----------~~~~  156 (260)
T PRK06603         88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK-----------VIPN  156 (260)
T ss_pred             cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc-----------CCCc
Confidence            99999987421             00           111222    233336899999865421           1111


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..++++..+.||.+-.+.... .-............++         ..+..++|+|
T Consensus       157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva  227 (260)
T PRK06603        157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL---------KRNTTQEDVG  227 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence            2335 88988776542       467899999999986653110 0001111111111111         1245689999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++++++....  ..|+.+.+.+|.
T Consensus       228 ~~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        228 GAAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHHHHhCcccccCcceEEEeCCcc
Confidence            99999997532  357778777764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.20  E-value=3.5e-10  Score=95.80  Aligned_cols=190  Identities=17%  Similarity=0.152  Sum_probs=115.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||.++++.|.++|++|++++|......  +.    ....  .-+...+.+|++|.+++.++++..     ++|+
T Consensus       216 tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~--l~----~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        216 TGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA--LA----AVAN--RVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHH--HH----HHHH--HcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999999988532210  00    0000  123467889999998888777632     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhCC------CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+++...                    .+..++.+++.      +..+||++||...+...           .....|
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-----------~~~~~Y  356 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-----------RGQTNY  356 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----------CCChHH
Confidence            999998521                    12233333322      33689999986653211           122345


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.       +..++.++.+.||.+-.+.. .. ++.......+.  +..      .......+|+++++.+
T Consensus       357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~-~~-~~~~~~~~~~~--~~~------l~~~~~p~dva~~~~~  426 (450)
T PRK08261        357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMT-AA-IPFATREAGRR--MNS------LQQGGLPVDVAETIAW  426 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhh-hc-cchhHHHHHhh--cCC------cCCCCCHHHHHHHHHH
Confidence             8887655554       24578999999998754321 11 11111111111  100      1112346899999999


Q ss_pred             HhcCC--CCCCceEEecCCc
Q 025702          202 VLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++..  ...|+.+.++++.
T Consensus       427 l~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        427 LASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             HhChhhcCCCCCEEEECCCc
Confidence            88643  2357788887643

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.20  E-value=8.3e-10  Score=87.23  Aligned_cols=194  Identities=11%  Similarity=0.109  Sum_probs=116.7

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+  +-||.++++.|.++|++|++..|+... .+.+     .++.+-......+.+|++|+++++++++.     .++
T Consensus        16 tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         16 LGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRV-----EPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHH-----HHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            6886  689999999999999999988775321 1000     00000012355789999999988887753     258


Q ss_pred             cEEEecCCCCh-------------h-----------hhHHHH----HhCCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA-------------D-----------EVEPIL----DALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~-------------~-----------~~~~~~----~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||++|...             .           +...++    ..+++..++|++||.....           +...
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-----------~~p~  158 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-----------VMPH  158 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-----------CCCc
Confidence            99999987521             0           111222    2233346899999855321           1111


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..++++..+.||.+..+.... .-............+         ...+..++|+|
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~peevA  229 (272)
T PRK08159        159 YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAP---------LRRTVTIEEVG  229 (272)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCc---------ccccCCHHHHH
Confidence            2235 88988776653       357899999999886642100 000000000001111         11246789999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++++++...  ...|..+.+.++..
T Consensus       230 ~~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        230 DSALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             HHHHHHhCccccCccceEEEECCCce
Confidence            9999999753  33677888888754

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.19  E-value=1e-09  Score=88.52  Aligned_cols=220  Identities=15%  Similarity=0.142  Sum_probs=125.8

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      |||++.||.++++.|+++| ++|++++|+........     ..+......+.++.+|++|.++++++++.     .++|
T Consensus         9 TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD   83 (314)
T TIGR01289         9 TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAA-----KSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD   83 (314)
T ss_pred             ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-----HHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999999999 99999999865421110     01111124678889999999888777653     2699


Q ss_pred             EEEecCCCCh----------h-----------h----hHHHHHhCC-C---CCeEEEeeccccccCCC----CCC-----
Q 025702           75 VVYDINGREA----------D-----------E----VEPILDALP-N---LEQFIYCSSAGVYLKSD----LLP-----  116 (249)
Q Consensus        75 ~Vi~~~~~~~----------~-----------~----~~~~~~a~~-~---~~~~i~~Ss~~v~~~~~----~~~-----  116 (249)
                      ++||++|...          .           +    ++.++..++ .   ..++|++||...+....    ..+     
T Consensus        84 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  163 (314)
T TIGR01289        84 ALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGD  163 (314)
T ss_pred             EEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccc
Confidence            9999988521          0           0    222344443 2   36999999987653210    000     


Q ss_pred             -------------CCCCCCCCCCCcc-cchHHHHHHH----hh----cCCcEEEeecceeeC-CCCCc--chHHHHHHHH
Q 025702          117 -------------HCETDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYG-PLNYN--PVEEWFFHRL  171 (249)
Q Consensus       117 -------------~~e~~~~~~~~~~-~~k~~~e~~~----~~----~~~~~~~~r~~~v~g-~~~~~--~~~~~~~~~~  171 (249)
                                   ..+..+..+...| .+|.....+.    ++    .++.++.++||.+.. +....  .....+....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~  243 (314)
T TIGR01289       164 LSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPF  243 (314)
T ss_pred             cccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHH
Confidence                         0011122233346 9998754432    21    368899999999863 32111  1111111111


Q ss_pred             HcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC-CCceEEecCCc--------------cccHHHHHHHHHHHhC
Q 025702          172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-SRQVFNISGEK--------------YVTFDGLARACAKVTG  235 (249)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~-~~~~~~i~~~~--------------~~s~~~l~~~~~~~~g  235 (249)
                      ....          ...+.++++.++.++.++..+.. .++.|.-..+.              +-...++|++..+.++
T Consensus       244 ~~~~----------~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  312 (314)
T TIGR01289       244 QKYI----------TKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLVG  312 (314)
T ss_pred             HHHH----------hccccchhhhhhhhHHhhcCcccCCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHhc
Confidence            1000          01245688999999988865321 23344332111              1233567777777665

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.19  E-value=7.3e-10  Score=86.09  Aligned_cols=70  Identities=19%  Similarity=0.190  Sum_probs=55.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|.||++++++|+++|++|++++|++........          ......+.+|++|.+++.+.+.  ++|++||++
T Consensus        20 TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~--~iDilVnnA   87 (245)
T PRK12367         20 TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND----------ESPNEWIKWECGKEESLDKQLA--SLDVLILNH   87 (245)
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc----------cCCCeEEEeeCCCHHHHHHhcC--CCCEEEECC
Confidence            7999999999999999999999999998632111100          1123567899999999988887  899999999


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      |.
T Consensus        88 G~   89 (245)
T PRK12367         88 GI   89 (245)
T ss_pred             cc
Confidence            86

>PRK06484 short chain dehydrogenase; Validated

Probab=99.19  E-value=7.4e-10  Score=95.55  Aligned_cols=190  Identities=14%  Similarity=0.187  Sum_probs=118.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++.||.++++.|.++|++|+++.|+.......        ..+....+.++.+|++|++++.++++.     .++|+
T Consensus        11 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484         11 TGAAGGIGRAACQRFARAGDQVVVADRNVERARER--------ADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986542211        111134677899999999988887764     26999


Q ss_pred             EEecCCCCh----------------------hh----hHHHHHhCC--CC-CeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA----------------------DE----VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        76 Vi~~~~~~~----------------------~~----~~~~~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +||++|...                      .+    .+.++..+.  +. .++|++||.......           ...
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-----------~~~  151 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-----------PKR  151 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC-----------CCC
Confidence            999987510                      01    222333332  22 389999987653211           122


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH-HHH-HHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWF-FHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ..| .+|...+.+.+       ..+++++.+.|+.+..+....... ... ........+         ...+...+|++
T Consensus       152 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va  222 (520)
T PRK06484        152 TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIP---------LGRLGRPEEIA  222 (520)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCC---------CCCCcCHHHHH
Confidence            345 88988877652       357899999999887663110000 000 000111100         11245689999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCC
Q 025702          197 RAFVQVLGNE--KASRQVFNISGE  218 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~  218 (249)
                      +++.+++...  ...|..+.+.++
T Consensus       223 ~~v~~l~~~~~~~~~G~~~~~~gg  246 (520)
T PRK06484        223 EAVFFLASDQASYITGSTLVVDGG  246 (520)
T ss_pred             HHHHHHhCccccCccCceEEecCC
Confidence            9999988753  224555555443

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.18  E-value=1.7e-09  Score=84.91  Aligned_cols=193  Identities=15%  Similarity=0.116  Sum_probs=116.5

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||++  -||+++++.|+++|++|++..|+... ....     ..+..-.+.+.++.+|++|+++++++++.     -++
T Consensus        12 TGas~~~GIG~aia~~la~~G~~vil~~r~~~~-~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   85 (262)
T PRK07984         12 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRV-----EEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF   85 (262)
T ss_pred             eCCCCCccHHHHHHHHHHHCCCEEEEEecchhH-HHHH-----HHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence            68875  79999999999999999988886311 0000     01111123466788999999988887753     158


Q ss_pred             cEEEecCCCChh--------------h-----------hHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD--------------E-----------VEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        74 d~Vi~~~~~~~~--------------~-----------~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      |++||++|....              .           ...+.++    +++..++|++||.....           +..
T Consensus        86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-----------~~~  154 (262)
T PRK07984         86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------AIP  154 (262)
T ss_pred             CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----------CCC
Confidence            999999974210              0           0112222    22336899998865320           111


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ....| .+|...+.+.+       ..++++..+.||.+-.+.... .-............++         ..+..++|+
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedv  225 (262)
T PRK07984        155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDV  225 (262)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC---------cCCCCHHHH
Confidence            12235 88988877653       357899999999886652110 0011111111111111         134668999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCc
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++++++++..  ...|..+.+.++.
T Consensus       226 a~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        226 GNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             HHHHHHHcCcccccccCcEEEECCCc
Confidence            99999998753  3357778777764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.17  E-value=2.8e-09  Score=83.72  Aligned_cols=193  Identities=14%  Similarity=0.132  Sum_probs=115.6

Q ss_pred             CCC--cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~--tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||  ++-||.++++.|+++|++|++..|..... +.+     ..+..-......+.+|++|++++.++++.     -++
T Consensus        12 tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (260)
T PRK06997         12 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRI-----TEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL   85 (260)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH-HHH-----HHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence            575  56899999999999999999886642211 000     00100012234678999999988887753     269


Q ss_pred             cEEEecCCCCh---------h-----h---------------hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA---------D-----E---------------VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        74 d~Vi~~~~~~~---------~-----~---------------~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      |++||++|...         .     .               ++.++..+++..++|++||....-           +..
T Consensus        86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-----------~~~  154 (260)
T PRK06997         86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----------VVP  154 (260)
T ss_pred             cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-----------CCC
Confidence            99999987521         0     0               112233333346899999865421           111


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ....| .+|...+.+.+       ..+++++.+.||.+-.+..... -.........+..++         ..+..++|+
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedv  225 (260)
T PRK06997        155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL---------RRNVTIEEV  225 (260)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc---------cccCCHHHH
Confidence            12235 88988776543       3578999999998876521100 001111111111111         124668999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCc
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++++.++++..  ...|+.+.+.++.
T Consensus       226 a~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        226 GNVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             HHHHHHHhCccccCcceeEEEEcCCh
Confidence            99999999753  3367778777664

>PLN00015 protochlorophyllide reductase

Probab=99.17  E-value=8.6e-10  Score=88.76  Aligned_cols=190  Identities=15%  Similarity=0.147  Sum_probs=111.2

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      |||++.||.+++++|+++| ++|++.+|+........     ..+......+.++.+|+.|.++++++++.     .++|
T Consensus         3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAA-----KSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-----HHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            7999999999999999999 99999998765421110     00111124678889999999988777753     2589


Q ss_pred             EEEecCCCChh---------------------h----hHHHHHhCC--C--CCeEEEeeccccccCCC--CCC----CC-
Q 025702           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSD--LLP----HC-  118 (249)
Q Consensus        75 ~Vi~~~~~~~~---------------------~----~~~~~~a~~--~--~~~~i~~Ss~~v~~~~~--~~~----~~-  118 (249)
                      ++||++|....                     +    ++.++..+.  +  ..++|++||...+-...  ..+    +. 
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            99999985210                     0    223344443  2  46999999976531100  000    00 


Q ss_pred             ----------C-------CCCCCCCCcc-cchHHHHHHH----hh----cCCcEEEeecceeeC-CCCCc--chHHHHHH
Q 025702          119 ----------E-------TDTVDPKSRH-KGKLNTESVL----ES----KGVNWTSLRPVYIYG-PLNYN--PVEEWFFH  169 (249)
Q Consensus       119 ----------e-------~~~~~~~~~~-~~k~~~e~~~----~~----~~~~~~~~r~~~v~g-~~~~~--~~~~~~~~  169 (249)
                                .       .....+...| .+|...+.+.    ++    .++.++.+.||+|.. +....  .....+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~  237 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFP  237 (308)
T ss_pred             hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHH
Confidence                      0       0111223336 8998744432    22    478999999999964 32111  11000000


Q ss_pred             HHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      .. ..  ..  .     ..+..+++.|+.++.++..
T Consensus       238 ~~-~~--~~--~-----~~~~~pe~~a~~~~~l~~~  263 (308)
T PLN00015        238 PF-QK--YI--T-----KGYVSEEEAGKRLAQVVSD  263 (308)
T ss_pred             HH-HH--HH--h-----cccccHHHhhhhhhhhccc
Confidence            00 00  00  0     1245689999999998865

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.14  E-value=3.5e-10  Score=93.30  Aligned_cols=72  Identities=17%  Similarity=0.167  Sum_probs=57.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|++|++++++|.++|++|++++|++........        ....++..+.+|+.|.+++.+.+.  ++|++||++
T Consensus       184 TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~--------~~~~~v~~v~~Dvsd~~~v~~~l~--~IDiLInnA  253 (406)
T PRK07424        184 TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN--------GEDLPVKTLHWQVGQEAALAELLE--KVDILIINH  253 (406)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------hcCCCeEEEEeeCCCHHHHHHHhC--CCCEEEECC
Confidence            7999999999999999999999999987654211110        001346778899999999999887  899999998


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      |.
T Consensus       254 Gi  255 (406)
T PRK07424        254 GI  255 (406)
T ss_pred             Cc
Confidence            75

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.14  E-value=8e-10  Score=86.58  Aligned_cols=179  Identities=16%  Similarity=0.136  Sum_probs=109.7

Q ss_pred             CCCcccchHHHHHHHHH----cCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhC---
Q 025702            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK---   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~---   71 (249)
                      |||++.||.+++++|.+    .|++|+++.|+....... .    ..+..  ....+.++.+|+.|.++++++++..   
T Consensus         6 tGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~-~----~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         6 TGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQL-K----AEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             ecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHH-H----HHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            79999999999999997    799999999986542111 0    01111  1236888999999998887766521   


Q ss_pred             ------CCcEEEecCCCCh------------hh---------------hHHHHHhCC-C---CCeEEEeeccccccCCCC
Q 025702           72 ------GFDVVYDINGREA------------DE---------------VEPILDALP-N---LEQFIYCSSAGVYLKSDL  114 (249)
Q Consensus        72 ------~~d~Vi~~~~~~~------------~~---------------~~~~~~a~~-~---~~~~i~~Ss~~v~~~~~~  114 (249)
                            +.+++||++|...            ..               ++.++..++ .   ..++|++||...+..   
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~---  157 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP---  157 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC---
Confidence                  1368999987521            00               122333443 1   257999998765311   


Q ss_pred             CCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH-----HHHHHHHHcCCCeeecC
Q 025702          115 LPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----EWFFHRLKAGRPIPIPG  181 (249)
Q Consensus       115 ~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~-----~~~~~~~~~~~~~~~~~  181 (249)
                              ......| .+|...+.+.+       ..++.++.+.||++-.+.... ..     +..........+     
T Consensus       158 --------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~-----  223 (256)
T TIGR01500       158 --------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ-VREESVDPDMRKGLQELKA-----  223 (256)
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH-HHHhcCChhHHHHHHHHHh-----
Confidence                    1122345 88988877653       256889999999886652100 00     000001111101     


Q ss_pred             CCcceEeeeeHHHHHHHHHHHhcC
Q 025702          182 SGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       182 ~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                          ...+..++|+|++++.++++
T Consensus       224 ----~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       224 ----KGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             ----cCCCCCHHHHHHHHHHHHhc
Confidence                11256789999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.10  E-value=1.7e-09  Score=87.33  Aligned_cols=170  Identities=15%  Similarity=0.161  Sum_probs=106.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-c-cCceEEEEeccCC--HHHHHHh---hhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKD--YDFVKSS---LSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~d~~d--~~~l~~~---~~~~~~   73 (249)
                      |||||.||++++++|.++|++|++++|+++..... .    .++.. . ...+..+.+|+.+  .+.+.++   +...++
T Consensus        59 TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~-~----~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~di  133 (320)
T PLN02780         59 TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDV-S----DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDV  133 (320)
T ss_pred             eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-H----HHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCc
Confidence            79999999999999999999999999987653211 0    11111 1 1356778889974  3333333   332346


Q ss_pred             cEEEecCCCChh----------------------hh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD----------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~----------------------~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||++|....                      +.    +.++..+.  +..++|++||...+...         ....
T Consensus       134 dilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---------~~p~  204 (320)
T PLN02780        134 GVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP---------SDPL  204 (320)
T ss_pred             cEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC---------CCcc
Confidence            699999875310                      12    22333332  55789999997653110         0011


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ...| .+|...+.+.+       ..+++++.+.||.+-.+...          . ....          ......+++|+
T Consensus       205 ~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----------~-~~~~----------~~~~~p~~~A~  263 (320)
T PLN02780        205 YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----------I-RRSS----------FLVPSSDGYAR  263 (320)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----------c-cCCC----------CCCCCHHHHHH
Confidence            2345 88988776642       35799999999998776310          0 0000          11346899999


Q ss_pred             HHHHHhcC
Q 025702          198 AFVQVLGN  205 (249)
Q Consensus       198 ~~~~~~~~  205 (249)
                      .++..+..
T Consensus       264 ~~~~~~~~  271 (320)
T PLN02780        264 AALRWVGY  271 (320)
T ss_pred             HHHHHhCC
Confidence            99999964

>PRK05599 hypothetical protein; Provisional

Probab=99.09  E-value=3.2e-09  Score=82.63  Aligned_cols=178  Identities=19%  Similarity=0.226  Sum_probs=112.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhcc-CceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      |||++-||.+++++|. +|++|++++|+..+....     ..++.... ..+.++.+|+.|.++++++++.     .++|
T Consensus         6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGL-----ASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHH-----HHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999998 599999999986542211     11111112 2478899999999888877653     2689


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      ++||++|....                    .    ...++..+.  + ..++|++||...+-.           .....
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-----------~~~~~  148 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA-----------RRANY  148 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC-----------CcCCc
Confidence            99999886211                    0    011223332  2 368999998654311           11223


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++.+.||.+..+..             .+.. +  .   .  -....+|+|+++
T Consensus       149 ~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~-------------~~~~-~--~---~--~~~~pe~~a~~~  207 (246)
T PRK05599        149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT-------------TGMK-P--A---P--MSVYPRDVAAAV  207 (246)
T ss_pred             chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh-------------cCCC-C--C---C--CCCCHHHHHHHH
Confidence            45 88877766542       3578899999998876521             0000 0  0   0  024689999999


Q ss_pred             HHHhcCCCCCCceEEecC
Q 025702          200 VQVLGNEKASRQVFNISG  217 (249)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~  217 (249)
                      +.++..... +..+.+.+
T Consensus       208 ~~~~~~~~~-~~~~~~~~  224 (246)
T PRK05599        208 VSAITSSKR-STTLWIPG  224 (246)
T ss_pred             HHHHhcCCC-CceEEeCc
Confidence            999988643 34454544

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.09  E-value=1.7e-09  Score=79.56  Aligned_cols=140  Identities=17%  Similarity=0.167  Sum_probs=92.4

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      +||+|++|.+++++|+++|. .|++++|++........  ....+.....++.++.+|+.+.+.+.++++..     .+|
T Consensus         6 ~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (180)
T smart00822        6 TGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE--LLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLR   83 (180)
T ss_pred             EcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCee
Confidence            69999999999999999986 68888887544211000  00111112356778899999988888776532     479


Q ss_pred             EEEecCCCC--------------------hhhhHHHHHhCC--CCCeEEEeeccccc-cCCCCCCCCCCCCCCCCCcc-c
Q 025702           75 VVYDINGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        75 ~Vi~~~~~~--------------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      .|||+++..                    ..+...+++++.  +.+++|++||.... +.            .....| .
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~------------~~~~~y~~  151 (180)
T smart00822       84 GVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN------------PGQANYAA  151 (180)
T ss_pred             EEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC------------CCchhhHH
Confidence            999998742                    123455666665  56789999986542 21            122234 7


Q ss_pred             chHHHHHHH---hhcCCcEEEeeccee
Q 025702          131 GKLNTESVL---ESKGVNWTSLRPVYI  154 (249)
Q Consensus       131 ~k~~~e~~~---~~~~~~~~~~r~~~v  154 (249)
                      +|...+.++   +..+++++.+.|+.+
T Consensus       152 sk~~~~~~~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      152 ANAFLDALAAHRRARGLPATSINWGAW  178 (180)
T ss_pred             HHHHHHHHHHHHHhcCCceEEEeeccc
Confidence            788777765   345778888887754

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.09  E-value=4.6e-09  Score=84.29  Aligned_cols=191  Identities=13%  Similarity=0.070  Sum_probs=111.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCC--CCC---CchhhhhccCceEEEEeccCCHHHHHHhhhh-----
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~---~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----   70 (249)
                      |||++.||.+++++|++.|++|++++|+..+.....  .+.   ....+......+.++.+|+.|+++++++++.     
T Consensus        14 TGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   93 (305)
T PRK08303         14 AGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQ   93 (305)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999999854321000  000   0111222234577889999999988877764     


Q ss_pred             CCCcEEEecC-CCC------h-------h-----------h----hHHHHHhCC--CCCeEEEeecccc-ccCCCCCCCC
Q 025702           71 KGFDVVYDIN-GRE------A-------D-----------E----VEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHC  118 (249)
Q Consensus        71 ~~~d~Vi~~~-~~~------~-------~-----------~----~~~~~~a~~--~~~~~i~~Ss~~v-~~~~~~~~~~  118 (249)
                      -++|++||++ +..      .       .           +    ++.++..+.  +..++|++||... +...      
T Consensus        94 g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~------  167 (305)
T PRK08303         94 GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT------  167 (305)
T ss_pred             CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc------
Confidence            2689999998 621      0       0           0    122333343  3468999998543 1110      


Q ss_pred             CCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeee
Q 025702          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                         +......| .+|.....+.+       ..++++..+.||.+-.+.     ...... ..+..............-+.
T Consensus       168 ---~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~-----~~~~~~-~~~~~~~~~~~~~p~~~~~~  238 (305)
T PRK08303        168 ---HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM-----MLDAFG-VTEENWRDALAKEPHFAISE  238 (305)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH-----HHHhhc-cCccchhhhhccccccccCC
Confidence               11112235 88987776642       357899999999886552     100000 00000000000000011234


Q ss_pred             eHHHHHHHHHHHhcCC
Q 025702          191 HVKDLARAFVQVLGNE  206 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~  206 (249)
                      ..+|+|+++++++..+
T Consensus       239 ~peevA~~v~fL~s~~  254 (305)
T PRK08303        239 TPRYVGRAVAALAADP  254 (305)
T ss_pred             CHHHHHHHHHHHHcCc
Confidence            6899999999999765

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.02  E-value=1.5e-08  Score=74.99  Aligned_cols=192  Identities=13%  Similarity=0.126  Sum_probs=122.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccc--cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||.|-||+.+.++|+++|..+.++.-+.+...  ..+...      .....+.|+++|+++..++++.+++.     ..
T Consensus        11 tggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai------~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen   11 TGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAI------NPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             ecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhcc------CCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            689999999999999999988777776655421  111111      11467899999999988888887652     69


Q ss_pred             cEEEecCCCCh----------------hhhHHHHHhCC-----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           74 DVVYDINGREA----------------DEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        74 d~Vi~~~~~~~----------------~~~~~~~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      |++||.||...                +.+.-.+.++.     ...-+|.+||..-+.+           ..-.+-| .+
T Consensus        85 DIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P-----------~p~~pVY~As  153 (261)
T KOG4169|consen   85 DILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP-----------MPVFPVYAAS  153 (261)
T ss_pred             EEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc-----------cccchhhhhc
Confidence            99999999732                24555666655     2346889997554311           1112223 55


Q ss_pred             hHH---------HHHHHhhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCC----cceEeeeeHHHHHHH
Q 025702          132 KLN---------TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSG----IQVTQLGHVKDLARA  198 (249)
Q Consensus       132 k~~---------~e~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~D~a~~  198 (249)
                      |+-         -+.+.+++|+++..++||..-.         .+++.+.+.....-+.+.    -...+.-+..++++.
T Consensus       154 KaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t---------~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~  224 (261)
T KOG4169|consen  154 KAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRT---------DLAENIDASGGYLEYSDSIKEALERAPKQSPACCAIN  224 (261)
T ss_pred             ccceeeeehhhhhhhhHhhcCEEEEEECCCcchH---------HHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHH
Confidence            522         2455678899999999987532         223333221111100000    001233457899999


Q ss_pred             HHHHhcCCCCCCceEEecCCc
Q 025702          199 FVQVLGNEKASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~~~~~~~~~i~~~~  219 (249)
                      ++.+++.+. +|.+|.+..+.
T Consensus       225 ~v~aiE~~~-NGaiw~v~~g~  244 (261)
T KOG4169|consen  225 IVNAIEYPK-NGAIWKVDSGS  244 (261)
T ss_pred             HHHHHhhcc-CCcEEEEecCc
Confidence            999999965 68889888765

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.00  E-value=2.8e-09  Score=82.82  Aligned_cols=123  Identities=23%  Similarity=0.189  Sum_probs=86.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccC-ceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSS-KILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~-~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+.-||.+++.+|.++|.+++.+.|..+..... .    .++. .... ++.++++|++|.++..+.++.     .+.
T Consensus        18 TGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v-~----~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~v   92 (282)
T KOG1205|consen   18 TGASSGIGEALAYELAKRGAKLVLVARRARRLERV-A----EELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRV   92 (282)
T ss_pred             eCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHH-H----HHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCC
Confidence            79999999999999999999888888876663211 0    0111 1123 599999999999988866632     289


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |++||+||....                        .++.++..++  +..++|.+||..-+-           +....+
T Consensus        93 DvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~-----------~~P~~~  161 (282)
T KOG1205|consen   93 DVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM-----------PLPFRS  161 (282)
T ss_pred             CEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc-----------CCCccc
Confidence            999999997421                        2555666666  448999999977531           111112


Q ss_pred             cc-cchHHHHHHH
Q 025702          128 RH-KGKLNTESVL  139 (249)
Q Consensus       128 ~~-~~k~~~e~~~  139 (249)
                      .| .+|.+.+.+.
T Consensus       162 ~Y~ASK~Al~~f~  174 (282)
T KOG1205|consen  162 IYSASKHALEGFF  174 (282)
T ss_pred             ccchHHHHHHHHH
Confidence            45 9999888775

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.98  E-value=2.1e-08  Score=78.73  Aligned_cols=202  Identities=16%  Similarity=0.155  Sum_probs=124.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh----h--CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A--KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~----~--~~~d   74 (249)
                      |||+.-||++++.+|.+.|.+|++..|+.+.........  .........+..+.+|+++.+..+++++    +  -+.|
T Consensus        14 TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gkid   91 (270)
T KOG0725|consen   14 TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQEL--GGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKID   91 (270)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999987632111000  0000013468899999998766555543    2  2699


Q ss_pred             EEEecCCCChh----------------------hhHHHHHhCC------CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREAD----------------------EVEPILDALP------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        75 ~Vi~~~~~~~~----------------------~~~~~~~a~~------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +++|++|....                      ....+..++.      +...++++||..-+..          ...+.
T Consensus        92 iLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~----------~~~~~  161 (270)
T KOG0725|consen   92 ILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP----------GPGSG  161 (270)
T ss_pred             EEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC----------CCCCc
Confidence            99999886421                      1222222222      3557888887654311          11221


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH----HHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      .+| .+|...+.+.+       +.++++..+-||.+..+.......    ..+.........++       .-.+...+|
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p-------~gr~g~~~e  234 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP-------LGRVGTPEE  234 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc-------cCCccCHHH
Confidence            456 99998888753       468999999999998885211111    11111100111111       123455899


Q ss_pred             HHHHHHHHhcCCC--CCCceEEecCCccc
Q 025702          195 LARAFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      +++++.+++..+.  ..|+.+.+.++..+
T Consensus       235 va~~~~fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  235 VAEAAAFLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             HHHhHHhhcCcccccccCCEEEEeCCEEe
Confidence            9999999887742  35667777776543

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.92  E-value=1.2e-08  Score=78.33  Aligned_cols=138  Identities=7%  Similarity=0.086  Sum_probs=93.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----C-CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K-GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~-~~d   74 (249)
                      |||++-+|.++++.|.++|++|+++.|+.....+..     ..+.+...++..+.+|+.|.++++++++.     . ++|
T Consensus        11 tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~-----~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD   85 (227)
T PRK08862         11 TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTY-----EQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD   85 (227)
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----HHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence            699999999999999999999999999865421110     11112234577788999999988877753     2 689


Q ss_pred             EEEecCCCCh----------hh---------------hHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREA----------DE---------------VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        75 ~Vi~~~~~~~----------~~---------------~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      ++||++|...          ..               .+.++..+.  + ...+|++||...+              .+.
T Consensus        86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------------~~~  151 (227)
T PRK08862         86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------------QDL  151 (227)
T ss_pred             EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------CCc
Confidence            9999986310          00               111223332  2 4689999985431              112


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCC
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~  157 (249)
                      ..| .+|...+.+.+       ..++++..+.||.+-.+
T Consensus       152 ~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        152 TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            234 88887776542       46799999999988766

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.87  E-value=1.6e-08  Score=73.76  Aligned_cols=137  Identities=18%  Similarity=0.202  Sum_probs=95.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+.-||..++++|++.|-+|++..|+..........         .+.+.-..+|+.|.++++++.+.     ...++
T Consensus        11 TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---------~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967          11 TGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---------NPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---------CcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            68888899999999999999999999998774332221         36788889999998876665542     26899


Q ss_pred             EEecCCCChh--------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD--------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~~--------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||+||....                          -+..++..+.  ...-+|.+||.-.|-+           ....+
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP-----------m~~~P  150 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP-----------MASTP  150 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc-----------ccccc
Confidence            9999997321                          1222333332  3557999998776522           22233


Q ss_pred             cc-cchHHHHHHH-------hhcCCcEEEeecceeeCC
Q 025702          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (249)
Q Consensus       128 ~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~  157 (249)
                      -| .+|+....+-       +..++++.-+-|+.|-.+
T Consensus       151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            45 7787766552       345788888889887654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.85  E-value=1.6e-08  Score=74.11  Aligned_cols=134  Identities=16%  Similarity=0.066  Sum_probs=95.0

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC------CCcE
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFDV   75 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~------~~d~   75 (249)
                      ++.|-||.+|+++|.+.|+.|++..|+.+.......          ..++.....|+++++++..+..+.      +.|+
T Consensus        15 cs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~----------~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen   15 CSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI----------QFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH----------hhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            577899999999999999999999999887433221          257888999999999888776532      5899


Q ss_pred             EEecCCCChh--------------------hh----HHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREAD--------------------EV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~----~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      ++|.||....                    +.    +.+.+.+. ....+|+++|..++-           +..-...| 
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v-----------pfpf~~iYs  153 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV-----------PFPFGSIYS  153 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe-----------ccchhhhhh
Confidence            9999886311                    12    22333322 456899999877652           22222346 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeC
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYG  156 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g  156 (249)
                      .+|++...+.+       ..|++++.+-+|.|-.
T Consensus       154 AsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  154 ASKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             HHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence            88988887753       3577888888887754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.84  E-value=2.4e-07  Score=74.10  Aligned_cols=199  Identities=8%  Similarity=-0.038  Sum_probs=110.4

Q ss_pred             CCC--cccchHHHHHHHHHcCCeEEEEecCCCccccCC---CC-CCch--hhhh--ccCceEEEEecc--CC--------
Q 025702            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL---PG-ESDQ--EFAE--FSSKILHLKGDR--KD--------   60 (249)
Q Consensus         1 ~G~--tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---~~-~~~~--~~~~--~~~~v~~~~~d~--~d--------   60 (249)
                      |||  +.-||.++++.|.++|.+|++ .|.........   .. ..+.  ....  .......+.+|+  .+        
T Consensus        15 TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   93 (303)
T PLN02730         15 AGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDV   93 (303)
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhh
Confidence            788  688999999999999999988 55433211000   00 0000  0000  001245677787  22        


Q ss_pred             ----------HHHHHHhhhh-----CCCcEEEecCCCCh-----------h-----------h----hHHHHHhCCCCCe
Q 025702           61 ----------YDFVKSSLSA-----KGFDVVYDINGREA-----------D-----------E----VEPILDALPNLEQ   99 (249)
Q Consensus        61 ----------~~~l~~~~~~-----~~~d~Vi~~~~~~~-----------~-----------~----~~~~~~a~~~~~~   99 (249)
                                .++++++++.     -++|++||++|...           .           +    ++.++..++...+
T Consensus        94 ~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~  173 (303)
T PLN02730         94 KTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGA  173 (303)
T ss_pred             hcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence                      2255555542     25899999985311           0           1    2223333443378


Q ss_pred             EEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------h-cCCcEEEeecceeeCCCCCc-chHHHHHH
Q 025702          100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFH  169 (249)
Q Consensus       100 ~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~-~~~~~~~~r~~~v~g~~~~~-~~~~~~~~  169 (249)
                      +|++||......          .+.....| .+|...+.+.+       . .+++++.+.||.+-.+.... ........
T Consensus       174 II~isS~a~~~~----------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~  243 (303)
T PLN02730        174 SISLTYIASERI----------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIE  243 (303)
T ss_pred             EEEEechhhcCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHH
Confidence            999998654211          01111235 88988877642       2 47899999999987764211 00111111


Q ss_pred             HHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ......++         ..+..++|++.++++++...  ...|+.+.+.++.
T Consensus       244 ~~~~~~pl---------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        244 YSYANAPL---------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             HHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            11111111         12356899999999999753  2357777777664

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.75  E-value=5.6e-08  Score=71.98  Aligned_cols=140  Identities=22%  Similarity=0.233  Sum_probs=85.3

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|-+|..+++.|.+++ .+++++.|+........  ..-..+......+.++.+|++|++++.++++..     .++
T Consensus         6 tGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~--~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~   83 (181)
T PF08659_consen    6 TGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAE--AAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPID   83 (181)
T ss_dssp             ETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHH--HHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EE
T ss_pred             ECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHH--HHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcc
Confidence            6999999999999999997 58999999842211100  011222333568899999999999999998743     578


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHhCC--CCCeEEEeecccc-ccCCCCCCCCCCCCCCCCCcccc
Q 025702           75 VVYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRHKG  131 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~~~  131 (249)
                      .|||+++...                    .+..++.+++.  ....||.+||... +|...           ...|..+
T Consensus        84 gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g-----------q~~YaaA  152 (181)
T PF08659_consen   84 GVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG-----------QSAYAAA  152 (181)
T ss_dssp             EEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT-----------BHHHHHH
T ss_pred             eeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc-----------hHhHHHH
Confidence            8999998631                    24666777765  7889999998664 44321           1122234


Q ss_pred             hHHHHHHH---hhcCCcEEEeecce
Q 025702          132 KLNTESVL---ESKGVNWTSLRPVY  153 (249)
Q Consensus       132 k~~~e~~~---~~~~~~~~~~r~~~  153 (249)
                      -...+.+.   +..+.+++.+..+.
T Consensus       153 N~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  153 NAFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEccc
Confidence            44444443   45678888776653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.74  E-value=2.5e-07  Score=71.68  Aligned_cols=173  Identities=14%  Similarity=0.174  Sum_probs=114.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-+|+.++.+|++.|.++.+.+.++....+...     ..... ..+....+|+++.+++.+..++     -.+++
T Consensus        44 TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~-----~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I  117 (300)
T KOG1201|consen   44 TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVK-----EIRKI-GEAKAYTCDISDREEIYRLAKKVKKEVGDVDI  117 (300)
T ss_pred             eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHH-----HHHhc-CceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999999988776432111     11111 2688899999998887766643     16999


Q ss_pred             EEecCCCCh--------------------h----hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------D----EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~----~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||.-.                    .    .++.++-.+.  +..++|-++|..-+          .....-.+|.
T Consensus       118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~----------~g~~gl~~Yc  187 (300)
T KOG1201|consen  118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL----------FGPAGLADYC  187 (300)
T ss_pred             EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc----------cCCccchhhh
Confidence            999998621                    1    1444555543  56799999886542          1122223333


Q ss_pred             cchHHHHHHH-------h---hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          130 KGKLNTESVL-------E---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       130 ~~k~~~e~~~-------~---~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .+|..+.-+.       +   ..+++.+.+.|+.+-...         +    ++ .    ..-....+.+..+.+|+.+
T Consensus       188 aSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm---------f----~~-~----~~~~~l~P~L~p~~va~~I  249 (300)
T KOG1201|consen  188 ASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM---------F----DG-A----TPFPTLAPLLEPEYVAKRI  249 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc---------c----CC-C----CCCccccCCCCHHHHHHHH
Confidence            8887665432       1   245788888887764321         0    11 1    1112356788999999999


Q ss_pred             HHHhcCCC
Q 025702          200 VQVLGNEK  207 (249)
Q Consensus       200 ~~~~~~~~  207 (249)
                      +.++....
T Consensus       250 v~ai~~n~  257 (300)
T KOG1201|consen  250 VEAILTNQ  257 (300)
T ss_pred             HHHHHcCC
Confidence            99998754

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.69  E-value=1e-07  Score=76.14  Aligned_cols=152  Identities=20%  Similarity=0.113  Sum_probs=99.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh--hccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA--EFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      ||||.-||.+++++|..+|.+|+..+|+.....+...     ++.  .....+.++++|+.|..+++++.+.     ...
T Consensus        41 TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~-----~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~l  115 (314)
T KOG1208|consen   41 TGATSGIGFETARELALRGAHVVLACRNEERGEEAKE-----QIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPL  115 (314)
T ss_pred             ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----HHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCc
Confidence            7999999999999999999999999999855321111     111  1245788899999999888776653     379


Q ss_pred             cEEEecCCCChh------------------h----hHHHHHhCC--CCCeEEEeeccccccC--CCCCCCCCCCC-CCCC
Q 025702           74 DVVYDINGREAD------------------E----VEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDT-VDPK  126 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~--~~~~~~~e~~~-~~~~  126 (249)
                      |++|++||....                  +    +..++..++  ...|+|++||..- +.  .-.....+... ....
T Consensus       116 dvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~~~  194 (314)
T KOG1208|consen  116 DVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYSSD  194 (314)
T ss_pred             cEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCccch
Confidence            999999986211                  1    344555565  2379999998554 21  11111111111 1222


Q ss_pred             Ccc-cchHHHHHHH----hh--cCCcEEEeecceeeCCC
Q 025702          127 SRH-KGKLNTESVL----ES--KGVNWTSLRPVYIYGPL  158 (249)
Q Consensus       127 ~~~-~~k~~~e~~~----~~--~~~~~~~~r~~~v~g~~  158 (249)
                      ..| .+|.......    ++  .++....+.||.+.++.
T Consensus       195 ~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  195 AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence            225 7887654432    22  27889999999998874

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.68  E-value=2.6e-08  Score=72.70  Aligned_cols=124  Identities=21%  Similarity=0.201  Sum_probs=83.2

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecC--CCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRG--KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KG   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~   72 (249)
                      |||+|-+|++++++|+++| +.|+++.|+  ...... +    ...+.....++.++.+|+++.++++++++.     ..
T Consensus         6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~-l----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    6 TGASSGIGRALARALARRGARVVILTSRSEDSEGAQE-L----IQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHH-H----HHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             ECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccc-c----ccccccccccccccccccccccccccccccccccccc
Confidence            6999999999999999995 678888888  111110 0    011122247889999999999988888764     37


Q ss_pred             CcEEEecCCCChh--------------------hhHHHHHhC--CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           73 FDVVYDINGREAD--------------------EVEPILDAL--PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        73 ~d~Vi~~~~~~~~--------------------~~~~~~~a~--~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +|++||+++....                    ....+.+++  ++..++|++||....           .+......| 
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~~~~Y~  149 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV-----------RGSPGMSAYS  149 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT-----------SSSTTBHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc-----------cCCCCChhHH
Confidence            9999999987431                    111222332  266799999987763           112223345 


Q ss_pred             cchHHHHHHHh
Q 025702          130 KGKLNTESVLE  140 (249)
Q Consensus       130 ~~k~~~e~~~~  140 (249)
                      .+|...+.+.+
T Consensus       150 askaal~~~~~  160 (167)
T PF00106_consen  150 ASKAALRGLTQ  160 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88888887764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.66  E-value=2.1e-07  Score=66.16  Aligned_cols=190  Identities=15%  Similarity=0.196  Sum_probs=118.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      ||+.--||+.+++.|.+.|.+|+++.|++....+....        ...-++.+.+|+.+.+.+++.+... ..|.++|.
T Consensus        13 TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e--------~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN   84 (245)
T KOG1207|consen   13 TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE--------TPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN   84 (245)
T ss_pred             ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh--------CCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence            56666799999999999999999999998774332221        1334899999999999988888633 46888888


Q ss_pred             CCCChh----------------------------hhHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           80 NGREAD----------------------------EVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        80 ~~~~~~----------------------------~~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      ||....                            ..++++.... ...++.+||...           ..+.....-| .
T Consensus        85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~-~GaIVNvSSqas-----------~R~~~nHtvYca  152 (245)
T KOG1207|consen   85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI-KGAIVNVSSQAS-----------IRPLDNHTVYCA  152 (245)
T ss_pred             chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC-CceEEEecchhc-----------ccccCCceEEee
Confidence            875311                            1223333322 234888888654           1233444456 7


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH-HHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      +|.+.+..-+       ...+++..+.|..+...+....+.. .-...+....+         .--|.-++.++.++.++
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riP---------l~rFaEV~eVVnA~lfL  223 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIP---------LKRFAEVDEVVNAVLFL  223 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCc---------hhhhhHHHHHHhhheee
Confidence            7776654422       2457889999999887654333210 10111111111         22466689999999998


Q ss_pred             hcCCC--CCCceEEecCCc
Q 025702          203 LGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~  219 (249)
                      ++...  ..|..+-+.+|.
T Consensus       224 LSd~ssmttGstlpveGGf  242 (245)
T KOG1207|consen  224 LSDNSSMTTGSTLPVEGGF  242 (245)
T ss_pred             eecCcCcccCceeeecCCc
Confidence            87643  245555555543

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.55  E-value=1.7e-07  Score=68.80  Aligned_cols=98  Identities=17%  Similarity=0.230  Sum_probs=69.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      ||||||+|. +++.|.++|++|++++|++........     .+.. ...+.++.+|+.|.+++.++++..     .+|.
T Consensus         6 tGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~-----~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          6 IGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKR-----ESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             ECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHH-----Hhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            699998876 999999999999999998654221110     0000 246788899999999888877632     5677


Q ss_pred             EEecCCCChhhhHHHHHhCC--CCC----eEEEeeccc
Q 025702           76 VYDINGREADEVEPILDALP--NLE----QFIYCSSAG  107 (249)
Q Consensus        76 Vi~~~~~~~~~~~~~~~a~~--~~~----~~i~~Ss~~  107 (249)
                      +|+..-  .....++..+|+  +++    +|+|+=+..
T Consensus        79 lv~~vh--~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~  114 (177)
T PRK08309         79 AVAWIH--SSAKDALSVVCRELDGSSETYRLFHVLGSA  114 (177)
T ss_pred             EEEecc--ccchhhHHHHHHHHccCCCCceEEEEeCCc
Confidence            776554  456778888877  666    899876433

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.51  E-value=2.1e-05  Score=62.92  Aligned_cols=200  Identities=7%  Similarity=-0.013  Sum_probs=104.2

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCC------cc-ccCCCC----CCch-----hh---hhccCceEEEEeccC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKA------PI-AQQLPG----ESDQ-----EF---AEFSSKILHLKGDRK   59 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~------~~-~~~~~~----~~~~-----~~---~~~~~~v~~~~~d~~   59 (249)
                      ||++  .-||+++++.|.++|++|++.++.+.      .. ......    ....     +.   .......+-+..|+.
T Consensus        14 TGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~~~i~   93 (299)
T PRK06300         14 AGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVPEEIR   93 (299)
T ss_pred             eCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEeecccC
Confidence            6874  67999999999999999999765420      00 000000    0000     00   000011222222332


Q ss_pred             C--------HHHHHHhhh----hC-CCcEEEecCCCCh---h-------------------h----hHHHHHhCCCCCeE
Q 025702           60 D--------YDFVKSSLS----AK-GFDVVYDINGREA---D-------------------E----VEPILDALPNLEQF  100 (249)
Q Consensus        60 d--------~~~l~~~~~----~~-~~d~Vi~~~~~~~---~-------------------~----~~~~~~a~~~~~~~  100 (249)
                      +        .++++++++    .. ++|++||++|...   .                   +    ++.++..++...++
T Consensus        94 ~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~i  173 (299)
T PRK06300         94 ENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGST  173 (299)
T ss_pred             ccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeE
Confidence            2        122444433    22 6999999986421   0                   1    22233344433578


Q ss_pred             EEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------h-cCCcEEEeecceeeCCCCCc-chHHHHHHH
Q 025702          101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYN-PVEEWFFHR  170 (249)
Q Consensus       101 i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~-~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~  170 (249)
                      |++||......          .+.....| .+|...+.+.+       . .+++++.+.||.+-.+.... .........
T Consensus       174 i~iss~~~~~~----------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~  243 (299)
T PRK06300        174 ISLTYLASMRA----------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDY  243 (299)
T ss_pred             EEEeehhhcCc----------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHH
Confidence            88887554211          01111135 88988766542       2 37899999999987763210 000111111


Q ss_pred             HHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      .....++         ..+...+|+++++.+++...  ...|+.+.+.++.
T Consensus       244 ~~~~~p~---------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        244 YQDWAPL---------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             HHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            1111111         12346899999999988753  2357788877654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.51  E-value=2.3e-06  Score=66.82  Aligned_cols=134  Identities=19%  Similarity=0.167  Sum_probs=94.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhh-------hCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLS-------AKG   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~-------~~~   72 (249)
                      ||+-.-.|+.++++|.++|+.|.+-+-.+.... .+..       +. .++...+..|++++++++++.+       +.+
T Consensus        35 TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae-~L~~-------~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   35 TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAE-SLRG-------ETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             ecCCcHHHHHHHHHHHhcCCEEEEEeecCchHH-HHhh-------hhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            677778999999999999999999996655522 2211       11 4678888999999988876653       346


Q ss_pred             CcEEEecCCCCh---------------------hh----hHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA---------------------DE----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        73 ~d~Vi~~~~~~~---------------------~~----~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      .-.|||+||...                     -+    ++.++-.++ .-.|+|++||..-  +         .+....
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R---------~~~p~~  175 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--R---------VALPAL  175 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--C---------ccCccc
Confidence            888999998521                     12    344444455 4569999998663  1         122233


Q ss_pred             Ccc-cchHHHHHHH-------hhcCCcEEEeecce
Q 025702          127 SRH-KGKLNTESVL-------ESKGVNWTSLRPVY  153 (249)
Q Consensus       127 ~~~-~~k~~~e~~~-------~~~~~~~~~~r~~~  153 (249)
                      ..| .+|..+|.+.       +..|+++.++-||.
T Consensus       176 g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~  210 (322)
T KOG1610|consen  176 GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGF  210 (322)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence            445 8999988764       45799999999994

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.50  E-value=6.3e-06  Score=61.38  Aligned_cols=177  Identities=15%  Similarity=0.138  Sum_probs=110.4

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEec-CCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-------C
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-------~   71 (249)
                      |||+--||-.|+++|++. |.++++.++ +++....     ....+....+++++++.|+++.+++....++       .
T Consensus         9 tGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~-----~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    9 TGANRGIGLGLVKELLKDKGIEVIIATARDPEKAAT-----ELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             eccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhH-----HHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            699999999999999976 666655554 4555211     1122233368999999999987777666543       4


Q ss_pred             CCcEEEecCCCCh----------------------------hhhHHHHHhCC-C---------CCeEEEeeccccccCCC
Q 025702           72 GFDVVYDINGREA----------------------------DEVEPILDALP-N---------LEQFIYCSSAGVYLKSD  113 (249)
Q Consensus        72 ~~d~Vi~~~~~~~----------------------------~~~~~~~~a~~-~---------~~~~i~~Ss~~v~~~~~  113 (249)
                      +.+++|+++|...                            +...+++..+. +         -..+|++||...-    
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s----  159 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS----  159 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc----
Confidence            8999999998621                            12333444322 1         1268888876541    


Q ss_pred             CCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcc
Q 025702          114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (249)
Q Consensus       114 ~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (249)
                          .......+...| ++|.+.-.+.+       +.++-++.+.||||-.....                         
T Consensus       160 ----~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-------------------------  210 (249)
T KOG1611|consen  160 ----IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-------------------------  210 (249)
T ss_pred             ----cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-------------------------
Confidence                111233445556 89987666544       34566889999998765321                         


Q ss_pred             eEeeeeHHHHHHHHHHHhcC--CCCCCceEEe
Q 025702          186 VTQLGHVKDLARAFVQVLGN--EKASRQVFNI  215 (249)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~--~~~~~~~~~i  215 (249)
                      .-..+.+++-+.-++..+.+  +..+|.-||-
T Consensus       211 ~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~  242 (249)
T KOG1611|consen  211 KKAALTVEESTSKLLASINKLKNEHNGGFFNR  242 (249)
T ss_pred             CCcccchhhhHHHHHHHHHhcCcccCcceEcc
Confidence            11345567777777777754  3345555554

>PRK09620 hypothetical protein; Provisional

Probab=98.49  E-value=4e-07  Score=69.60  Aligned_cols=71  Identities=17%  Similarity=0.165  Sum_probs=49.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      .|||+|++|+++|+++|++|+++++.........+.         ...+..+.++....+.+.++++..++|+|||+|+.
T Consensus        27 SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~---------~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         27 AKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN---------QLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC---------ceeEEEEecHHHHHHHHHHHhcccCCCEEEECccc
Confidence            479999999999999999999998754321111110         12334455544334677888865589999999986

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.47  E-value=3.5e-06  Score=65.78  Aligned_cols=181  Identities=20%  Similarity=0.172  Sum_probs=112.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+.-+|..++..+..+|+.|+++.|+..+.......   -+..+....|.+..+|+.|.+++..++++.     -+|.
T Consensus        39 tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~---l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~  115 (331)
T KOG1210|consen   39 TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAE---LELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDN  115 (331)
T ss_pred             ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhh---hhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcce
Confidence            68999999999999999999999999998874332211   011111233668889999999999888865     6899


Q ss_pred             EEecCCCChh--------------------hhHHH----HHhCCC---CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------EVEPI----LDALPN---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~~~~----~~a~~~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||||..+.                    ++.++    +.+++.   ..+++.+||....           .+....+.
T Consensus       116 l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-----------~~i~Gysa  184 (331)
T KOG1210|consen  116 LFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-----------LGIYGYSA  184 (331)
T ss_pred             EEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-----------cCcccccc
Confidence            9999997432                    23333    333442   3388888875541           12223333


Q ss_pred             c-cchHH----HHHHH---hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLN----TESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~----~e~~~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|..    ++.+-   .+.++.++..-|+.+..|+.-         +-...+| ....-++.  -+.+..+++|.++
T Consensus       185 Ys~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE---------~En~tkP~~t~ii~g~--ss~~~~e~~a~~~  253 (331)
T KOG1210|consen  185 YSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFE---------RENKTKPEETKIIEGG--SSVIKCEEMAKAI  253 (331)
T ss_pred             cccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccc---------cccccCchheeeecCC--CCCcCHHHHHHHH
Confidence            3 44543    33332   345778888888888877521         1001111 11111111  2346789999998


Q ss_pred             HHHhcCC
Q 025702          200 VQVLGNE  206 (249)
Q Consensus       200 ~~~~~~~  206 (249)
                      +.-+.+.
T Consensus       254 ~~~~~rg  260 (331)
T KOG1210|consen  254 VKGMKRG  260 (331)
T ss_pred             HhHHhhc
Confidence            8877664

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.42  E-value=1.5e-06  Score=67.71  Aligned_cols=142  Identities=20%  Similarity=0.169  Sum_probs=93.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCCHH----HHHHhhhhCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----FVKSSLSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~----~l~~~~~~~~~d~   75 (249)
                      ||||.-||++.+++|.++|++|++++|+.++......     +++ +..-.+.++..|+++.+    .+++.+....+.+
T Consensus        55 TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~k-----EI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   55 TGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAK-----EIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----HHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            7999999999999999999999999999988432211     112 12246888899998644    5777777778899


Q ss_pred             EEecCCCChhh--------------------------hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREADE--------------------------VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~~~--------------------------~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||++|...+.                          ++-++-.+.  +..-++++||..-.           .+.....
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~p~~s  198 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPTPLLS  198 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccChhHH
Confidence            99998863211                          111222222  44567788875531           1222233


Q ss_pred             cc-cchHHHHHHH-------hhcCCcEEEeecceeeCCC
Q 025702          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPL  158 (249)
Q Consensus       128 ~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~  158 (249)
                      .| .+|...+...       +..++.+..+-|..|-++.
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence            45 6676444332       4568888888888887764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.35  E-value=8.5e-07  Score=72.24  Aligned_cols=81  Identities=26%  Similarity=0.297  Sum_probs=65.0

Q ss_pred             CcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|++|+.++..|.+.| .+|++.+|++.+..+....        ...+++.++.|+.|.+++.++++  +.|+||+++.
T Consensus         8 GaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--------~~~~v~~~~vD~~d~~al~~li~--~~d~VIn~~p   77 (389)
T COG1748           8 GAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--------IGGKVEALQVDAADVDALVALIK--DFDLVINAAP   77 (389)
T ss_pred             CCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--------ccccceeEEecccChHHHHHHHh--cCCEEEEeCC
Confidence            44999999999999998 9999999998774332111        12479999999999999999999  7899999998


Q ss_pred             CChhhhHHHHHhCC
Q 025702           82 READEVEPILDALP   95 (249)
Q Consensus        82 ~~~~~~~~~~~a~~   95 (249)
                      ....  .+++++|-
T Consensus        78 ~~~~--~~i~ka~i   89 (389)
T COG1748          78 PFVD--LTILKACI   89 (389)
T ss_pred             chhh--HHHHHHHH
Confidence            7443  36776654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.35  E-value=7.6e-06  Score=63.78  Aligned_cols=141  Identities=20%  Similarity=0.267  Sum_probs=89.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcc-ccCCCCCCchhhhhcc-CceEEEEeccCC-HHHHHHhhhh-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFS-SKILHLKGDRKD-YDFVKSSLSA-----KG   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~-~~v~~~~~d~~d-~~~l~~~~~~-----~~   72 (249)
                      |||++-+|.++++.|.++|++|+++.|..... ......    ...... ..+.+..+|+++ .+.+..+++.     -+
T Consensus        11 TGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~   86 (251)
T COG1028          11 TGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAA----AIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGR   86 (251)
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHH----HHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999999886641 100000    000001 357777899998 7777666642     14


Q ss_pred             CcEEEecCCCChh---------------------hhHHHHHhCC-CCC--eEEEeeccccccCCCCCCCCCCCCCCC-CC
Q 025702           73 FDVVYDINGREAD---------------------EVEPILDALP-NLE--QFIYCSSAGVYLKSDLLPHCETDTVDP-KS  127 (249)
Q Consensus        73 ~d~Vi~~~~~~~~---------------------~~~~~~~a~~-~~~--~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~  127 (249)
                      .|+++|+++....                     +...+..++. ..+  ++|++||.... ..           .+ ..
T Consensus        87 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~-----------~~~~~  154 (251)
T COG1028          87 IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG-----------PPGQA  154 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC-----------CCCcc
Confidence            8999999986321                     1111222211 112  99999987753 11           11 24


Q ss_pred             cc-cchHHHHHHH-------hhcCCcEEEeecceeeCC
Q 025702          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (249)
Q Consensus       128 ~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~  157 (249)
                      .| .+|...+.+.       ...++.++.+.||.+-.+
T Consensus       155 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         155 AYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence            45 8898776554       235788999999955544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.34  E-value=6.6e-06  Score=81.65  Aligned_cols=146  Identities=15%  Similarity=0.045  Sum_probs=96.4

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCcc--ccCC------------------------CC-----------CC--
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPI--AQQL------------------------PG-----------ES--   40 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~--~~~~------------------------~~-----------~~--   40 (249)
                      |||++-||..++++|.++ |.+|+++.|++...  ..+.                        +.           ..  
T Consensus      2003 TGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ei 2082 (2582)
T TIGR02813      2003 TGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSLEI 2082 (2582)
T ss_pred             eCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhHHH
Confidence            799999999999999998 69999999983110  0000                        00           00  


Q ss_pred             ---chhhhhccCceEEEEeccCCHHHHHHhhhhC----CCcEEEecCCCC--------------------hhhhHHHHHh
Q 025702           41 ---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVVYDINGRE--------------------ADEVEPILDA   93 (249)
Q Consensus        41 ---~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----~~d~Vi~~~~~~--------------------~~~~~~~~~a   93 (249)
                         ...+...+..+.++.+|++|.+++.++++..    ++|.|||++|..                    +.+..+++.+
T Consensus      2083 ~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~a 2162 (2582)
T TIGR02813      2083 AQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAA 2162 (2582)
T ss_pred             HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence               0111223457889999999999888777642    589999999862                    2345667777


Q ss_pred             CC--CCCeEEEeeccccc-cCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-----hcCCcEEEeecceeeCCC
Q 025702           94 LP--NLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-----SKGVNWTSLRPVYIYGPL  158 (249)
Q Consensus        94 ~~--~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-----~~~~~~~~~r~~~v~g~~  158 (249)
                      +.  ..+++|++||...+ |..            ....| .+|.....+.+     ..+++++.+.+|.+-+++
T Consensus      2163 l~~~~~~~IV~~SSvag~~G~~------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2163 LNAENIKLLALFSSAAGFYGNT------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             HHHhCCCeEEEEechhhcCCCC------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCc
Confidence            54  45789999986653 221            12235 77766555432     235788889998776653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.26  E-value=4.6e-07  Score=71.56  Aligned_cols=91  Identities=19%  Similarity=0.256  Sum_probs=65.3

Q ss_pred             CCCcccchHHHHHHHHH----cCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVK----EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      .|||||.|..++.++..    .+...-+..|++.+..+.+....+.-.....+.+ ++.+|..|++++.+..+  ++.+|
T Consensus        11 yGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak--~~~vi   87 (423)
T KOG2733|consen   11 YGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK--QARVI   87 (423)
T ss_pred             EccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh--hhEEE
Confidence            49999999999999999    6788999999987743322111000001112344 88999999999999998  99999


Q ss_pred             EecCCCChhhhHHHHHhC
Q 025702           77 YDINGREADEVEPILDAL   94 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~   94 (249)
                      +||.|.-.-...+++++|
T Consensus        88 vN~vGPyR~hGE~VVkac  105 (423)
T KOG2733|consen   88 VNCVGPYRFHGEPVVKAC  105 (423)
T ss_pred             EeccccceecCcHHHHHH
Confidence            999998554444444443

>PRK06720 hypothetical protein; Provisional

Probab=98.24  E-value=2.1e-06  Score=62.64  Aligned_cols=77  Identities=19%  Similarity=0.220  Sum_probs=56.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.+|..++..|.++|++|++++|+.......     ...+......+.++.+|+++.+++.++++.     -++|+
T Consensus        22 TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDi   96 (169)
T PRK06720         22 TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQAT-----VEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDM   96 (169)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999875432100     011111134567789999998888776532     26999


Q ss_pred             EEecCCC
Q 025702           76 VYDINGR   82 (249)
Q Consensus        76 Vi~~~~~   82 (249)
                      +||++|.
T Consensus        97 lVnnAG~  103 (169)
T PRK06720         97 LFQNAGL  103 (169)
T ss_pred             EEECCCc
Confidence            9999885

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.21  E-value=5.2e-06  Score=63.69  Aligned_cols=68  Identities=19%  Similarity=0.272  Sum_probs=48.0

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcEEEec
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~Vi~~   79 (249)
                      .+||++|++|+++|+++|++|++++|......  ..          ..+++++.++..+  .+.+.+.+.  ++|+|||+
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--~~----------~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~   88 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--EP----------HPNLSIIEIENVDDLLETLEPLVK--DHDVLIHS   88 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccC--CC----------CCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeC
Confidence            47999999999999999999999997643211  01          1356666654322  245555565  79999999


Q ss_pred             CCCC
Q 025702           80 NGRE   83 (249)
Q Consensus        80 ~~~~   83 (249)
                      |+..
T Consensus        89 AAvs   92 (229)
T PRK06732         89 MAVS   92 (229)
T ss_pred             CccC
Confidence            9863

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.18  E-value=7e-06  Score=63.76  Aligned_cols=83  Identities=16%  Similarity=0.151  Sum_probs=63.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||||. |+.|++.|.+.|++|++.+++...... +.          ..+...+..+..|.+.+.+.+++.++++||+.+
T Consensus         6 lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~-~~----------~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt   73 (256)
T TIGR00715         6 MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHL-YP----------IHQALTVHTGALDPQELREFLKRHSIDILVDAT   73 (256)
T ss_pred             EechHH-HHHHHHHHHhCCCeEEEEEccCCcccc-cc----------ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence            599998 999999999999999999999876322 22          122334556677888899999988999999987


Q ss_pred             CCC-hhhhHHHHHhCC
Q 025702           81 GRE-ADEVEPILDALP   95 (249)
Q Consensus        81 ~~~-~~~~~~~~~a~~   95 (249)
                      ... .....++.++|+
T Consensus        74 HPfA~~is~~a~~a~~   89 (256)
T TIGR00715        74 HPFAAQITTNATAVCK   89 (256)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            653 355667777766

This enzyme was found to be a monomer by gel filtration.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.11  E-value=3.7e-05  Score=54.84  Aligned_cols=187  Identities=19%  Similarity=0.274  Sum_probs=112.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||..-+|...++.|.++|..|.+++-..++-.+..        .+.+.++.|...|++++..++..++..     +.|+
T Consensus        15 tggasglg~ataerlakqgasv~lldlp~skg~~va--------kelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   15 TGGASGLGKATAERLAKQGASVALLDLPQSKGADVA--------KELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             ecCcccccHHHHHHHHhcCceEEEEeCCcccchHHH--------HHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            577778999999999999999999998776633211        123678999999999999888888642     6999


Q ss_pred             EEecCCCChh--------------------------hhHHHHHh----CC------CCCe--EEEeeccccccCCCCCCC
Q 025702           76 VYDINGREAD--------------------------EVEPILDA----LP------NLEQ--FIYCSSAGVYLKSDLLPH  117 (249)
Q Consensus        76 Vi~~~~~~~~--------------------------~~~~~~~a----~~------~~~~--~i~~Ss~~v~~~~~~~~~  117 (249)
                      .+||+|....                          ++.|++..    +.      +.+|  +|...|...|...     
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq-----  161 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ-----  161 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc-----
Confidence            9999986311                          11111111    00      1112  2222333332111     


Q ss_pred             CCCCCCCCCCcc-cchHHHHH-------HHhhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcC--CCeeecCCCcceE
Q 025702          118 CETDTVDPKSRH-KGKLNTES-------VLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG--RPIPIPGSGIQVT  187 (249)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~e~-------~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  187 (249)
                            .....| .+|...--       -+...+++++.+.||.+-.|     ++..+-++.+.=  ..++++      .
T Consensus       162 ------~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tp-----llsslpekv~~fla~~ipfp------s  224 (260)
T KOG1199|consen  162 ------TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTP-----LLSSLPEKVKSFLAQLIPFP------S  224 (260)
T ss_pred             ------cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCCh-----hhhhhhHHHHHHHHHhCCCc------h
Confidence                  111223 55543222       12345788999988876555     233332222210  112222      1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCCCCceEEecC
Q 025702          188 QLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (249)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (249)
                      .+-|..+.+..+..+++++.-+|+++.+.+
T Consensus       225 rlg~p~eyahlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  225 RLGHPHEYAHLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             hcCChHHHHHHHHHHHhCcccCCeEEEecc
Confidence            245678889999999999988888887765

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.05  E-value=4e-06  Score=69.72  Aligned_cols=90  Identities=22%  Similarity=0.296  Sum_probs=64.0

Q ss_pred             CCCcccchHHHHHHHHHcC-C-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG-H-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|+ |++|+.+++.|.+.+ + +|++.+|+..+........       ...+++.+..|+.|.+++.++++  ++|+|||
T Consensus         4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin   73 (386)
T PF03435_consen    4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------LGDRVEAVQVDVNDPESLAELLR--GCDVVIN   73 (386)
T ss_dssp             E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE
T ss_pred             EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------cccceeEEEEecCCHHHHHHHHh--cCCEEEE
Confidence            488 999999999999986 4 8999999988742211100       14689999999999999999999  8999999


Q ss_pred             cCCCChhhhHHHHHhCC-CCCeEEE
Q 025702           79 INGREADEVEPILDALP-NLEQFIY  102 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~-~~~~~i~  102 (249)
                      +++..  ....++++|- ...++|-
T Consensus        74 ~~gp~--~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   74 CAGPF--FGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             -SSGG--GHHHHHHHHHHHT-EEEE
T ss_pred             CCccc--hhHHHHHHHHHhCCCeec
Confidence            99864  5556666655 2235555

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=97.80  E-value=0.00014  Score=55.26  Aligned_cols=81  Identities=14%  Similarity=0.132  Sum_probs=55.3

Q ss_pred             CCCcccchHHHHHHHHHcC-----CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----
Q 025702            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----   70 (249)
                      ||++..+|-+|+..|++..     .++++.+|+-++..+ .....++...+...+++++..|+++..++.++-++     
T Consensus         9 TGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~-vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf   87 (341)
T KOG1478|consen    9 TGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEA-VCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRF   87 (341)
T ss_pred             ecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHH-HHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHh
Confidence            7999999999999999874     468888898777422 11111111112234788999999987665544432     


Q ss_pred             CCCcEEEecCCC
Q 025702           71 KGFDVVYDINGR   82 (249)
Q Consensus        71 ~~~d~Vi~~~~~   82 (249)
                      .+.|.|+-.||.
T Consensus        88 ~~ld~iylNAg~   99 (341)
T KOG1478|consen   88 QRLDYIYLNAGI   99 (341)
T ss_pred             hhccEEEEcccc
Confidence            178999988886

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.79  E-value=7.9e-05  Score=59.95  Aligned_cols=148  Identities=19%  Similarity=0.196  Sum_probs=86.6

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|.+|+.++..|...+  .++..+++.... ...+      ++.....  .....+.+|...+.+.++  ++|+||+
T Consensus        14 iGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~-g~a~------Dl~~~~~--~~~v~~~td~~~~~~~l~--gaDvVVi   82 (321)
T PTZ00325         14 LGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP-GVAA------DLSHIDT--PAKVTGYADGELWEKALR--GADLVLI   82 (321)
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc-cccc------chhhcCc--CceEEEecCCCchHHHhC--CCCEEEE
Confidence            5888999999999998665  689999983211 1110      1111112  223445555444456676  9999999


Q ss_pred             cCCCCh--------------hhhHHHHHhCC--CCCeEEEeeccccccCCCCC--CCCCCCCCCCCCcc-cchHH---HH
Q 025702           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLN---TE  136 (249)
Q Consensus        79 ~~~~~~--------------~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~--~~~e~~~~~~~~~~-~~k~~---~e  136 (249)
                      ++|...              ..+++++++++  +.+++|+++|-.+..-..-.  .+.+...+.|...+ .+-+.   ..
T Consensus        83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r  162 (321)
T PTZ00325         83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR  162 (321)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence            998732              24667888876  78999999986663311100  11233333444444 32111   11


Q ss_pred             HH-HhhcCCcEEEeecceeeCCCCC
Q 025702          137 SV-LESKGVNWTSLRPVYIYGPLNY  160 (249)
Q Consensus       137 ~~-~~~~~~~~~~~r~~~v~g~~~~  160 (249)
                      .+ .+..+++...++ +.|+|....
T Consensus       163 ~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        163 KFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             HHHHHHhCcChhheE-EEEEeecCC
Confidence            11 245667777776 788887543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.74  E-value=9.9e-05  Score=56.50  Aligned_cols=89  Identities=25%  Similarity=0.337  Sum_probs=67.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+++++.|.+.|++|+++.+++.........         ......+.+|-+|++.|+++ ++  ++|+++-..+
T Consensus         7 G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~t~   75 (225)
T COG0569           7 GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGID--DADAVVAATG   75 (225)
T ss_pred             CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCC--cCCEEEEeeC
Confidence            679999999999999999999999998875432221         25788899999999999887 66  9999998888


Q ss_pred             CChhhhHHHHHhCC--CCCeEEE
Q 025702           82 READEVEPILDALP--NLEQFIY  102 (249)
Q Consensus        82 ~~~~~~~~~~~a~~--~~~~~i~  102 (249)
                      .+.....-..-+++  +++++|-
T Consensus        76 ~d~~N~i~~~la~~~~gv~~via   98 (225)
T COG0569          76 NDEVNSVLALLALKEFGVPRVIA   98 (225)
T ss_pred             CCHHHHHHHHHHHHhcCCCcEEE
Confidence            75443333333333  6666663

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.72  E-value=6.4e-05  Score=60.78  Aligned_cols=75  Identities=16%  Similarity=0.069  Sum_probs=46.4

Q ss_pred             CCCcccchHHHHHHHHHcC-------CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~   73 (249)
                      |||+|++|++++..|+..+       .+++++++++....  .. ....++..   .......|+.....+.+.++  ++
T Consensus         8 ~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~--~~-g~~~Dl~d---~~~~~~~~~~~~~~~~~~l~--~a   79 (325)
T cd01336           8 TGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKA--LE-GVVMELQD---CAFPLLKSVVATTDPEEAFK--DV   79 (325)
T ss_pred             ECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcccc--cc-ceeeehhh---ccccccCCceecCCHHHHhC--CC
Confidence            6999999999999999854       58999999754210  10 00001110   00011224433455666777  99


Q ss_pred             cEEEecCCCC
Q 025702           74 DVVYDINGRE   83 (249)
Q Consensus        74 d~Vi~~~~~~   83 (249)
                      |+|||+||..
T Consensus        80 DiVI~tAG~~   89 (325)
T cd01336          80 DVAILVGAMP   89 (325)
T ss_pred             CEEEEeCCcC
Confidence            9999999873

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.65  E-value=0.0039  Score=46.95  Aligned_cols=191  Identities=12%  Similarity=0.107  Sum_probs=108.0

Q ss_pred             ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcEEEec
Q 025702            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDVVYDI   79 (249)
Q Consensus         5 G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~Vi~~   79 (249)
                      -.|++.|++.|.++|.++......+.- .+..     .++.+......++.||+++.++++++++..     +.|.++|+
T Consensus        18 rSIAwGIAk~l~~~GAeL~fTy~~e~l-~krv-----~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHs   91 (259)
T COG0623          18 RSIAWGIAKALAEQGAELAFTYQGERL-EKRV-----EELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHS   91 (259)
T ss_pred             ccHHHHHHHHHHHcCCEEEEEeccHHH-HHHH-----HHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEE
Confidence            358999999999999998887776522 1100     111111223456899999999988888642     79999999


Q ss_pred             CCCChh------------------------hhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           80 NGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        80 ~~~~~~------------------------~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      .++...                        ....+.++++    ....+|-+|-.+.           ......++-- .
T Consensus        92 IaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs-----------~r~vPnYNvMGv  160 (259)
T COG0623          92 IAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS-----------ERVVPNYNVMGV  160 (259)
T ss_pred             eccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc-----------eeecCCCchhHH
Confidence            876321                        0112233322    2233443331110           0011122222 6


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCC-CcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      +|...|.-+|       +.++++..+-.|.|-.--. .-.-+..++....+..++.         ..+..+|++...+++
T Consensus       161 AKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~---------r~vt~eeVG~tA~fL  231 (259)
T COG0623         161 AKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLR---------RNVTIEEVGNTAAFL  231 (259)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCcc---------CCCCHHHhhhhHHHH
Confidence            7888776543       3466666665554321100 0011334454544444432         335589999999999


Q ss_pred             hcCC--CCCCceEEecCCccc
Q 025702          203 LGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++.-  ...|++.++.+|..+
T Consensus       232 lSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         232 LSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             hcchhcccccceEEEcCCcee
Confidence            8763  336889888887654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.63  E-value=4.9e-05  Score=56.93  Aligned_cols=76  Identities=21%  Similarity=0.227  Sum_probs=55.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||+|.+|+.+++.|.+.|++|+++.|+..+... +.    ..+.. ..+.++..+|..+.+.+.+.++  ++|+||++.
T Consensus        34 lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~-l~----~~l~~-~~~~~~~~~~~~~~~~~~~~~~--~~diVi~at  105 (194)
T cd01078          34 LGGTGPVGQRAAVLLAREGARVVLVGRDLERAQK-AA----DSLRA-RFGEGVGAVETSDDAARAAAIK--GADVVFAAG  105 (194)
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HH----HHHHh-hcCCcEEEeeCCCHHHHHHHHh--cCCEEEECC
Confidence            5899999999999999999999999998644211 11    00000 1244566778888888888888  899999987


Q ss_pred             CCCh
Q 025702           81 GREA   84 (249)
Q Consensus        81 ~~~~   84 (249)
                      +...
T Consensus       106 ~~g~  109 (194)
T cd01078         106 AAGV  109 (194)
T ss_pred             CCCc
Confidence            6544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN00106 malate dehydrogenase

Probab=97.62  E-value=0.00019  Score=57.84  Aligned_cols=146  Identities=19%  Similarity=0.186  Sum_probs=82.2

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|.+|+.++..|...+  .++.+++.++.. ...+      ++.......  ...++.+.+++.+.++  ++|+||+
T Consensus        24 iGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~-g~a~------Dl~~~~~~~--~i~~~~~~~d~~~~l~--~aDiVVi   92 (323)
T PLN00106         24 LGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP-GVAA------DVSHINTPA--QVRGFLGDDQLGDALK--GADLVII   92 (323)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC-eeEc------hhhhCCcCc--eEEEEeCCCCHHHHcC--CCCEEEE
Confidence            5888999999999999776  489999987621 1111      111111112  2334444445667777  9999999


Q ss_pred             cCCCC--------------hhhhHHHHHhCC--CCCeEEEeeccccccCC--CCCCCCCCCCCCCCCcc-cchHHHHHH-
Q 025702           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-KGKLNTESV-  138 (249)
Q Consensus        79 ~~~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~--~~~~~~e~~~~~~~~~~-~~k~~~e~~-  138 (249)
                      ++|..              ...++++++++.  +...+|+++|--+-+..  -...+.+...+.|...+ .++...+.+ 
T Consensus        93 tAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~  172 (323)
T PLN00106         93 PAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRAN  172 (323)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHH
Confidence            99863              224666777765  66788888764331100  00001122333444444 445444443 


Q ss_pred             ---HhhcCCcEEEeecceeeCCC
Q 025702          139 ---LESKGVNWTSLRPVYIYGPL  158 (249)
Q Consensus       139 ---~~~~~~~~~~~r~~~v~g~~  158 (249)
                         .+..+++...+. +.|+|..
T Consensus       173 ~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        173 TFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHHhCCChhheE-EEEEEeC
Confidence               245666666663 3555543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.51  E-value=0.00015  Score=55.56  Aligned_cols=63  Identities=22%  Similarity=0.361  Sum_probs=44.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcEEE
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDVVY   77 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~Vi   77 (249)
                      ++|.+|.+++++|.++|++|+++++....  .  +          ..   ...+|+.+.+.+.++++.     .++|++|
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l--~--~----------~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV   85 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRAL--K--P----------EP---HPNLSIREIETTKDLLITLKELVQEHDILI   85 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhhc--c--c----------cc---CCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence            68999999999999999999998763211  0  0          00   124677776666655432     2689999


Q ss_pred             ecCCC
Q 025702           78 DINGR   82 (249)
Q Consensus        78 ~~~~~   82 (249)
                      |+||.
T Consensus        86 nnAgv   90 (227)
T TIGR02114        86 HSMAV   90 (227)
T ss_pred             ECCEe
Confidence            99985

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.48  E-value=0.0004  Score=57.69  Aligned_cols=63  Identities=16%  Similarity=0.124  Sum_probs=48.3

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh--CCCcEEEecCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--KGFDVVYDING   81 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~--~~~d~Vi~~~~   81 (249)
                      +|.+|.+++++|.++|++|++++++...  . .           ..++  ...|+++.+++.+.+.+  .++|++||+|+
T Consensus       213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~~--~-~-----------~~~~--~~~dv~~~~~~~~~v~~~~~~~DilI~~Aa  276 (399)
T PRK05579        213 SGKMGYALARAAARRGADVTLVSGPVNL--P-T-----------PAGV--KRIDVESAQEMLDAVLAALPQADIFIMAAA  276 (399)
T ss_pred             cchHHHHHHHHHHHCCCEEEEeCCCccc--c-C-----------CCCc--EEEccCCHHHHHHHHHHhcCCCCEEEEccc
Confidence            8999999999999999999999987531  1 1           1223  35688888777776653  26899999998


Q ss_pred             C
Q 025702           82 R   82 (249)
Q Consensus        82 ~   82 (249)
                      .
T Consensus       277 v  277 (399)
T PRK05579        277 V  277 (399)
T ss_pred             c
Confidence            6

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.43  E-value=0.0003  Score=58.10  Aligned_cols=96  Identities=20%  Similarity=0.234  Sum_probs=61.5

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHH-hhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~-~~~~~~~d~Vi~   78 (249)
                      +||||++|+.|++.|+++ .+++..+.+..+.. +.+..          ....+...|..+.+.++. .++  ++|+||.
T Consensus        44 vGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-~~i~~----------~~~~l~~~~~~~~~~~~~~~~~--~~DvVf~  110 (381)
T PLN02968         44 LGASGYTGAEVRRLLANHPDFEITVMTADRKAG-QSFGS----------VFPHLITQDLPNLVAVKDADFS--DVDAVFC  110 (381)
T ss_pred             ECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-CCchh----------hCccccCccccceecCCHHHhc--CCCEEEE
Confidence            599999999999999998 57999998864431 11110          011112233332222222 245  8999998


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeeccccccC
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSSAGVYLK  111 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~v~~~  111 (249)
                      +.+.  ....+++.++....++|-+|+...+.+
T Consensus       111 Alp~--~~s~~i~~~~~~g~~VIDlSs~fRl~~  141 (381)
T PLN02968        111 CLPH--GTTQEIIKALPKDLKIVDLSADFRLRD  141 (381)
T ss_pred             cCCH--HHHHHHHHHHhCCCEEEEcCchhccCC
Confidence            8775  466667776663468999998887644

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.38  E-value=0.00043  Score=56.66  Aligned_cols=82  Identities=11%  Similarity=0.049  Sum_probs=55.0

Q ss_pred             CCCcccchHH--HHHHHHHcCCeEEEEecCCCccccC------CCC-CCchhhhhccCceEEEEeccCCHHHHHHhhhhC
Q 025702            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQ------LPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (249)
Q Consensus         1 ~G~tG~iG~~--l~~~L~~~g~~v~~~~r~~~~~~~~------~~~-~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~   71 (249)
                      ||+++-+|.+  ++++| +.|.+|+++++........      ... .........+..+..+.+|+++.+.+.++++..
T Consensus        47 TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I  125 (398)
T PRK13656         47 IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELI  125 (398)
T ss_pred             ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            6999999999  89999 9999999998643221100      000 001111122334677899999988887777532


Q ss_pred             -----CCcEEEecCCCC
Q 025702           72 -----GFDVVYDINGRE   83 (249)
Q Consensus        72 -----~~d~Vi~~~~~~   83 (249)
                           ++|++||+++..
T Consensus       126 ~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        126 KQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHhcCCCCEEEECCccC
Confidence                 699999998864

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.36  E-value=0.0002  Score=56.52  Aligned_cols=72  Identities=21%  Similarity=0.214  Sum_probs=53.1

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      ||+||.|..++++|..+|.+-.+..|+..+... +.       ..+++..  -...+-+++.+++.++  +.++|+||+|
T Consensus        13 GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~-l~-------~~LG~~~--~~~p~~~p~~~~~~~~--~~~VVlncvG   80 (382)
T COG3268          13 GATGYAGGLVAEYLAREGLTAALAGRSSAKLDA-LR-------ASLGPEA--AVFPLGVPAALEAMAS--RTQVVLNCVG   80 (382)
T ss_pred             ccccchhHHHHHHHHHcCCchhhccCCHHHHHH-HH-------HhcCccc--cccCCCCHHHHHHHHh--cceEEEeccc
Confidence            999999999999999999988888888766321 10       0112233  3344555899999998  9999999999


Q ss_pred             CChh
Q 025702           82 READ   85 (249)
Q Consensus        82 ~~~~   85 (249)
                      .-..
T Consensus        81 Pyt~   84 (382)
T COG3268          81 PYTR   84 (382)
T ss_pred             cccc
Confidence            7433

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.85  E-value=0.00098  Score=53.94  Aligned_cols=63  Identities=22%  Similarity=0.259  Sum_probs=43.7

Q ss_pred             CCCcccchHHHHHHHHHc-C-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-G-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+|++|+.+++.|.++ | .+++++.|+...... +.           .  ++..+++.   .+.+.+.  ++|+|||
T Consensus       161 tGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~-La-----------~--el~~~~i~---~l~~~l~--~aDiVv~  221 (340)
T PRK14982        161 VGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE-LQ-----------A--ELGGGKIL---SLEEALP--EADIVVW  221 (340)
T ss_pred             EccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH-HH-----------H--HhccccHH---hHHHHHc--cCCEEEE
Confidence            699999999999999865 5 689999887554211 11           1  11123333   3557777  8999999


Q ss_pred             cCCC
Q 025702           79 INGR   82 (249)
Q Consensus        79 ~~~~   82 (249)
                      +++.
T Consensus       222 ~ts~  225 (340)
T PRK14982        222 VASM  225 (340)
T ss_pred             CCcC
Confidence            9886

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.84  E-value=0.0052  Score=50.09  Aligned_cols=86  Identities=17%  Similarity=0.145  Sum_probs=54.0

Q ss_pred             CCCcccchHHHHHHHHHcCCe---EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +||||++|+.|++.|.+++|.   +..+++....... +.          ..+.+....|+.+.     .++  ++|+||
T Consensus         7 vGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~-l~----------~~g~~i~v~d~~~~-----~~~--~vDvVf   68 (334)
T PRK14874          7 VGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE-LS----------FKGKELKVEDLTTF-----DFS--GVDIAL   68 (334)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe-ee----------eCCceeEEeeCCHH-----HHc--CCCEEE
Confidence            599999999999999998764   4777776443211 11          12234445566432     234  899999


Q ss_pred             ecCCCChhhhHHHHHhC-C-CCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDAL-P-NLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~-~-~~~~~i~~Ss~~  107 (249)
                      .+.+.  ...+.+...+ . ++ ++|=+|+..
T Consensus        69 ~A~g~--g~s~~~~~~~~~~G~-~VIDlS~~~   97 (334)
T PRK14874         69 FSAGG--SVSKKYAPKAAAAGA-VVIDNSSAF   97 (334)
T ss_pred             ECCCh--HHHHHHHHHHHhCCC-EEEECCchh
Confidence            98875  3445555543 3 44 677667654

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.81  E-value=0.0045  Score=45.80  Aligned_cols=64  Identities=16%  Similarity=0.193  Sum_probs=40.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcEEEecC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||..|.+|++++..+|++|+.+.....-.   .           +.+++.+.+.-.+  .+.+.+.+.  +.|++|++|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~---~-----------p~~~~~i~v~sa~em~~~~~~~~~--~~Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSSLP---P-----------PPGVKVIRVESAEEMLEAVKELLP--SADIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGG--GGSEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCcccc---c-----------cccceEEEecchhhhhhhhccccC--cceeEEEec
Confidence            689999999999999999999999984321   1           2467776653322  234445554  679999998


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      +.
T Consensus        91 AV   92 (185)
T PF04127_consen   91 AV   92 (185)
T ss_dssp             B-
T ss_pred             ch
Confidence            85

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK05086 malate dehydrogenase; Provisional

Probab=96.74  E-value=0.0041  Score=50.16  Aligned_cols=94  Identities=19%  Similarity=0.251  Sum_probs=56.2

Q ss_pred             CCCcccchHHHHHHHHH-c--CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVK-E--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~-~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|.+|++++..|.. .  ++++.+++|++....  ..    .++... +....+.+  .+.+.+.+.++  ++|+||
T Consensus         6 IGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g--~a----lDl~~~-~~~~~i~~--~~~~d~~~~l~--~~DiVI   74 (312)
T PRK05086          6 LGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPG--VA----VDLSHI-PTAVKIKG--FSGEDPTPALE--GADVVL   74 (312)
T ss_pred             ECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcc--ee----hhhhcC-CCCceEEE--eCCCCHHHHcC--CCCEEE
Confidence            58999999999998855 2  468888888743210  00    011110 11122233  22233345556  899999


Q ss_pred             ecCCCCh--------------hhhHHHHHhCC--CCCeEEEeec
Q 025702           78 DINGREA--------------DEVEPILDALP--NLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~--------------~~~~~~~~a~~--~~~~~i~~Ss  105 (249)
                      .++|...              ...+++++++.  +.+++|.+.|
T Consensus        75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9998632              24666777766  6677777765

>cd00704 MDH Malate dehydrogenase

Probab=96.58  E-value=0.0052  Score=49.76  Aligned_cols=29  Identities=21%  Similarity=0.151  Sum_probs=24.5

Q ss_pred             CCCcccchHHHHHHHHHcC-------CeEEEEecCC
Q 025702            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGK   29 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-------~~v~~~~r~~   29 (249)
                      +||+|.+|+.++..|...+       ++++.+++++
T Consensus         6 iGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           6 TGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            6899999999999999865       2588888876

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.57  E-value=0.0031  Score=50.29  Aligned_cols=75  Identities=13%  Similarity=0.146  Sum_probs=50.3

Q ss_pred             CCCcccchHHHHHHHHHcCCe-EEEEecCCC--ccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKA--PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~-v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +|+ |-+|++++..|.+.|.+ |+++.|+..  .....+.    ..+......+.+..+|+.+.+.+...++  ..|+||
T Consensus       132 ~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~----~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~DilI  204 (289)
T PRK12548        132 IGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTA----EKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDILV  204 (289)
T ss_pred             ECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHH----HHHhhcCCCceeEEechhhhhHHHhhhc--cCCEEE
Confidence            477 78999999999999985 999999862  1111111    1111112345556678888777777776  779999


Q ss_pred             ecCCC
Q 025702           78 DINGR   82 (249)
Q Consensus        78 ~~~~~   82 (249)
                      |+...
T Consensus       205 NaTp~  209 (289)
T PRK12548        205 NATLV  209 (289)
T ss_pred             EeCCC
Confidence            88653

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.51  E-value=0.0025  Score=46.27  Aligned_cols=93  Identities=18%  Similarity=0.190  Sum_probs=49.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCC--chhhhhccCceEEEEeccCCHHHHHHhhhh-------CCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-------~~~   73 (249)
                      |.|.+|+.+++.|+++||+|++.+|++++.........  .....+...+..++..-+.|.+++++++..       ..-
T Consensus         8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g   87 (163)
T PF03446_consen    8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRPG   87 (163)
T ss_dssp             --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TT
T ss_pred             chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhccccc
Confidence            56899999999999999999999999766322111000  000111112334444444555555544432       134


Q ss_pred             cEEEecCCCChhhhHHHHHhCC
Q 025702           74 DVVYDINGREADEVEPILDALP   95 (249)
Q Consensus        74 d~Vi~~~~~~~~~~~~~~~a~~   95 (249)
                      .++|+++.......+.+.+.+.
T Consensus        88 ~iiid~sT~~p~~~~~~~~~~~  109 (163)
T PF03446_consen   88 KIIIDMSTISPETSRELAERLA  109 (163)
T ss_dssp             EEEEE-SS--HHHHHHHHHHHH
T ss_pred             eEEEecCCcchhhhhhhhhhhh
Confidence            5566666665666666666554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.50  E-value=0.01  Score=40.68  Aligned_cols=93  Identities=18%  Similarity=0.134  Sum_probs=50.0

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCce-EEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +||||++|+.+++.|.++. +++..+..+.......+.....     ...+. .....+ .+.+.+    .  ++|+||.
T Consensus         5 vGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~-~~~~~~----~--~~Dvvf~   72 (121)
T PF01118_consen    5 VGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFP-----HPKGFEDLSVED-ADPEEL----S--DVDVVFL   72 (121)
T ss_dssp             ESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTG-----GGTTTEEEBEEE-TSGHHH----T--TESEEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcc-----ccccccceeEee-cchhHh----h--cCCEEEe
Confidence            5999999999999999974 5666655554421111110000     00111 111122 344433    4  9999999


Q ss_pred             cCCCChhhhHHHHHhCC-CCCeEEEeeccc
Q 025702           79 INGREADEVEPILDALP-NLEQFIYCSSAG  107 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~  107 (249)
                      +.+.  .....+...+. ..-++|=+|+..
T Consensus        73 a~~~--~~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   73 ALPH--GASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             -SCH--HHHHHHHHHHHHTTSEEEESSSTT
T ss_pred             cCch--hHHHHHHHHHhhCCcEEEeCCHHH
Confidence            9774  44455555543 323777666544

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.50  E-value=0.009  Score=48.20  Aligned_cols=98  Identities=17%  Similarity=0.207  Sum_probs=56.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCC-----------CCCC--chhhhhccCceEEEEeccCCHHHHHHhhh
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-----------PGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----------~~~~--~~~~~~~~~~v~~~~~d~~d~~~l~~~~~   69 (249)
                      |+|.+|..++..|+++|++|++++|++.......           ....  .........++++       ...+.++++
T Consensus         9 G~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~-------~~~~~~a~~   81 (308)
T PRK06129          9 GAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV-------TDSLADAVA   81 (308)
T ss_pred             CccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE-------ECcHHHhhC
Confidence            4799999999999999999999999875422100           0000  0000000011111       123444555


Q ss_pred             hCCCcEEEecCCCChhhhHHHHHhCC--CCCeEEEeeccccc
Q 025702           70 AKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVY  109 (249)
Q Consensus        70 ~~~~d~Vi~~~~~~~~~~~~~~~a~~--~~~~~i~~Ss~~v~  109 (249)
                        ++|+|+.+..........++..+.  .....|+.||+..+
T Consensus        82 --~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~  121 (308)
T PRK06129         82 --DADYVQESAPENLELKRALFAELDALAPPHAILASSTSAL  121 (308)
T ss_pred             --CCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence              899999988766555555555443  23345556766654

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.48  E-value=0.0066  Score=49.21  Aligned_cols=31  Identities=19%  Similarity=0.195  Sum_probs=25.2

Q ss_pred             CCCcccchHHHHHHHHHcCC-------eEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-------~v~~~~r~~~~   31 (249)
                      +|++|.+|++++..|...+.       +++++++.+..
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~   42 (324)
T TIGR01758         5 TGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM   42 (324)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc
Confidence            58889999999999998552       68899886553

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=96.48  E-value=0.0082  Score=47.28  Aligned_cols=63  Identities=17%  Similarity=0.077  Sum_probs=51.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |+|-+|..++-++++.|.+|++++|-..-......             -.-+..|+.|.++++++++.++||.|+-
T Consensus        19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------------hrs~Vi~MlD~~al~avv~rekPd~IVp   81 (394)
T COG0027          19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSYVIDMLDGDALRAVVEREKPDYIVP   81 (394)
T ss_pred             cCCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------------hheeeeeccCHHHHHHHHHhhCCCeeee
Confidence            68999999999999999999999998765432221             1224569999999999999999999994

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.47  E-value=0.0097  Score=49.42  Aligned_cols=64  Identities=20%  Similarity=0.272  Sum_probs=47.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHH-HHhhhh--CCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSA--KGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l-~~~~~~--~~~d~Vi~~   79 (249)
                      +||.+|.+++++|..+|++|+.+.+.....   .+           .++  ...|+.+.+++ +++++.  .++|++|++
T Consensus       209 SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~-----------~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~  272 (390)
T TIGR00521       209 SSGKMGLALAEAAYKRGADVTLITGPVSLL---TP-----------PGV--KSIKVSTAEEMLEAALNELAKDFDIFISA  272 (390)
T ss_pred             CcchHHHHHHHHHHHCCCEEEEeCCCCccC---CC-----------CCc--EEEEeccHHHHHHHHHHhhcccCCEEEEc
Confidence            358899999999999999999999765431   11           233  45688887777 555522  268999999


Q ss_pred             CCC
Q 025702           80 NGR   82 (249)
Q Consensus        80 ~~~   82 (249)
                      |+.
T Consensus       273 Aav  275 (390)
T TIGR00521       273 AAV  275 (390)
T ss_pred             ccc
Confidence            986

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.44  E-value=0.0069  Score=45.61  Aligned_cols=177  Identities=15%  Similarity=0.135  Sum_probs=99.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh---h--CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---A--KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~---~--~~~d~   75 (249)
                      ||++--||..++..+.+.+-+.....++.....   ++.   ...+.+.......+|+.....+.+.++   .  -+-+.
T Consensus        12 TGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~---~~~---L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~i   85 (253)
T KOG1204|consen   12 TGASRGIGTGSVATILAEDDEALRYGVARLLAE---LEG---LKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDI   85 (253)
T ss_pred             ecCCCCccHHHHHHHHhcchHHHHHhhhccccc---ccc---eEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeE
Confidence            799999999999999998866555544433321   100   001111223333455555443333332   1  26899


Q ss_pred             EEecCCCCh------------hh-----hH----------HHHHhCC-C--CCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA------------DE-----VE----------PILDALP-N--LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        76 Vi~~~~~~~------------~~-----~~----------~~~~a~~-~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |||+||.--            ..     ..          -.+..++ .  .+-++++||....           .|...
T Consensus        86 iI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav-----------~p~~~  154 (253)
T KOG1204|consen   86 IIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV-----------RPFSS  154 (253)
T ss_pred             EEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh-----------ccccH
Confidence            999998621            11     11          1233333 2  3678899986642           34445


Q ss_pred             CCcc-cchHHHHHHH-----hhc-CCcEEEeecceeeCCCC-----CcchHHH---HHHHHHcCCCeeecCCCcceEeee
Q 025702          126 KSRH-KGKLNTESVL-----ESK-GVNWTSLRPVYIYGPLN-----YNPVEEW---FFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~-----~~~-~~~~~~~r~~~v~g~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                      +..| .+|++.+.+.     ++. ++.+..++||.+-.+++     ..++-+.   ++..+++..            .++
T Consensus       155 wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~------------~ll  222 (253)
T KOG1204|consen  155 WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESG------------QLL  222 (253)
T ss_pred             HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcC------------CcC
Confidence            5567 8888777665     343 67888999998766542     1112222   222222222            345


Q ss_pred             eHHHHHHHHHHHhcCC
Q 025702          191 HVKDLARAFVQVLGNE  206 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~  206 (249)
                      ...+.++.+..++++.
T Consensus       223 ~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  223 DPQVTAKVLAKLLEKG  238 (253)
T ss_pred             ChhhHHHHHHHHHHhc
Confidence            5678888888888775

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.42  E-value=0.0047  Score=41.93  Aligned_cols=69  Identities=17%  Similarity=0.217  Sum_probs=52.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|.+.+++|+++++++.......           ..++.++.+|.+|++.++++-- .+++.|+-+...
T Consensus         5 G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-----------~~~~~~i~gd~~~~~~l~~a~i-~~a~~vv~~~~~   72 (116)
T PF02254_consen    5 GYGRIGREIAEQLKEGGIDVVVIDRDPERVEELR-----------EEGVEVIYGDATDPEVLERAGI-EKADAVVILTDD   72 (116)
T ss_dssp             S-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-----------HTTSEEEES-TTSHHHHHHTTG-GCESEEEEESSS
T ss_pred             cCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-----------hcccccccccchhhhHHhhcCc-cccCEEEEccCC
Confidence            5578999999999997779999999986632111           2568999999999998876532 389999988775


Q ss_pred             C
Q 025702           83 E   83 (249)
Q Consensus        83 ~   83 (249)
                      .
T Consensus        73 d   73 (116)
T PF02254_consen   73 D   73 (116)
T ss_dssp             H
T ss_pred             H
Confidence            3

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.38  E-value=0.053  Score=40.69  Aligned_cols=106  Identities=16%  Similarity=0.191  Sum_probs=65.6

Q ss_pred             CCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCC----C------------CchhhhhccCceEEEEe--ccCC-H
Q 025702            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG----E------------SDQEFAEFSSKILHLKG--DRKD-Y   61 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~----~------------~~~~~~~~~~~v~~~~~--d~~d-~   61 (249)
                      |++| +|.++++.|...|. ++++++.+.-.....-..    .            ....+.+..+.+++...  ++.+ .
T Consensus        26 G~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~~~~~~  104 (198)
T cd01485          26 GAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEEDSLSND  104 (198)
T ss_pred             CCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecccccch
Confidence            4544 99999999999995 688888765432111110    0            01234445566655443  3431 4


Q ss_pred             HHHHHhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeeccccccC
Q 025702           62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (249)
Q Consensus        62 ~~l~~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~  111 (249)
                      +...+.++  ++|+||.+... ......+-+.|+ ...++|+.++.+.+|.
T Consensus       105 ~~~~~~~~--~~dvVi~~~d~-~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  152 (198)
T cd01485         105 SNIEEYLQ--KFTLVIATEEN-YERTAKVNDVCRKHHIPFISCATYGLIGY  152 (198)
T ss_pred             hhHHHHHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence            45566777  89999988553 344444555677 5568999998777764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.35  E-value=0.0054  Score=52.24  Aligned_cols=68  Identities=16%  Similarity=0.293  Sum_probs=53.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+++++.|.+.|++|+++++++..... +..         ..+++++.+|.++.+.+.++ ++  ++|.|+-+..
T Consensus         7 G~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~-~~~---------~~~~~~~~gd~~~~~~l~~~~~~--~a~~vi~~~~   74 (453)
T PRK09496          7 GAGQVGYTLAENLSGENNDVTVIDTDEERLRR-LQD---------RLDVRTVVGNGSSPDVLREAGAE--DADLLIAVTD   74 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HHh---------hcCEEEEEeCCCCHHHHHHcCCC--cCCEEEEecC
Confidence            34999999999999999999999998765321 110         14688999999999988877 66  8999998765


Q ss_pred             C
Q 025702           82 R   82 (249)
Q Consensus        82 ~   82 (249)
                      .
T Consensus        75 ~   75 (453)
T PRK09496         75 S   75 (453)
T ss_pred             C
Confidence            4

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.29  E-value=0.014  Score=47.72  Aligned_cols=86  Identities=15%  Similarity=0.159  Sum_probs=52.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEE---EEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVT---LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~---~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +||||++|+.|++.|.+++|++.   .+.+..... ..+.          ..+...+..|+. .+    .++  ++|+||
T Consensus         5 vGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g-~~~~----------~~~~~~~~~~~~-~~----~~~--~~D~v~   66 (339)
T TIGR01296         5 VGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG-RKVT----------FKGKELEVNEAK-IE----SFE--GIDIAL   66 (339)
T ss_pred             EcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC-Ceee----------eCCeeEEEEeCC-hH----Hhc--CCCEEE
Confidence            59999999999999999887654   333553331 1111          123455566663 22    234  899999


Q ss_pred             ecCCCChhhhHHHHHhC-C-CCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDAL-P-NLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~-~-~~~~~i~~Ss~~  107 (249)
                      .+.+..  ....+...+ . ++ ++|=.|+..
T Consensus        67 ~a~g~~--~s~~~a~~~~~~G~-~VID~ss~~   95 (339)
T TIGR01296        67 FSAGGS--VSKEFAPKAAKCGA-IVIDNTSAF   95 (339)
T ss_pred             ECCCHH--HHHHHHHHHHHCCC-EEEECCHHH
Confidence            998864  344444443 3 44 566666543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.27  E-value=0.012  Score=50.09  Aligned_cols=71  Identities=28%  Similarity=0.387  Sum_probs=52.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|.+.|++|++++++++.....         ..-..++.++.+|.++.+.+.+.-- .+++.||-+...
T Consensus       238 G~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~---------~~~~~~~~~i~gd~~~~~~L~~~~~-~~a~~vi~~~~~  307 (453)
T PRK09496        238 GGGNIGYYLAKLLEKEGYSVKLIERDPERAEEL---------AEELPNTLVLHGDGTDQELLEEEGI-DEADAFIALTND  307 (453)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH---------HHHCCCCeEEECCCCCHHHHHhcCC-ccCCEEEECCCC
Confidence            459999999999999999999999887652211         0002467889999999988854432 389999977665


Q ss_pred             C
Q 025702           83 E   83 (249)
Q Consensus        83 ~   83 (249)
                      .
T Consensus       308 ~  308 (453)
T PRK09496        308 D  308 (453)
T ss_pred             c
Confidence            3

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.15  E-value=0.028  Score=39.73  Aligned_cols=103  Identities=16%  Similarity=0.153  Sum_probs=62.1

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCC----C--CC--------CchhhhhccCceEEE--EeccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQL----P--GE--------SDQEFAEFSSKILHL--KGDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~----~--~~--------~~~~~~~~~~~v~~~--~~d~~d~~~l~   65 (249)
                      |.|-+|+.+++.|...|. ++++++.+.-......    .  ..        ....+....+.+++.  ..++.+ +...
T Consensus         6 G~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~-~~~~   84 (143)
T cd01483           6 GLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE-DNLD   84 (143)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh-hhHH
Confidence            457899999999999996 6888876643321110    0  00        012333334455443  334333 3335


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeeccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~  109 (249)
                      ..+.  ++|+||.+... ......+.++|+ ...++|..++.+.+
T Consensus        85 ~~~~--~~diVi~~~d~-~~~~~~l~~~~~~~~i~~i~~~~~g~~  126 (143)
T cd01483          85 DFLD--GVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLGLG  126 (143)
T ss_pred             HHhc--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEcCCCcE
Confidence            6666  99999998876 444555666677 45678877765543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.11  E-value=0.077  Score=37.11  Aligned_cols=104  Identities=15%  Similarity=0.151  Sum_probs=65.4

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEEE--EeccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHL--KGDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~--~~d~~d~~~l~   65 (249)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-...              ....+.+..+.+++.  ..++ +.+.+.
T Consensus         9 G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~   87 (135)
T PF00899_consen    9 GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-DEENIE   87 (135)
T ss_dssp             STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-SHHHHH
T ss_pred             CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-cccccc
Confidence            568899999999999996 7888887655422111110              012333444544444  4444 566778


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      +.++  ++|+||.+... ...-..+-+.|+ ...++|..++.+.+|
T Consensus        88 ~~~~--~~d~vi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   88 ELLK--DYDIVIDCVDS-LAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             HHHH--TSSEEEEESSS-HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccc--CCCEEEEecCC-HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            8887  99999998765 333444555666 556898888766544

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.06  E-value=0.063  Score=40.47  Aligned_cols=104  Identities=15%  Similarity=0.086  Sum_probs=64.2

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCC--------------CCchhhhhccCceEEEEe--ccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHLKG--DRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~--------------~~~~~~~~~~~~v~~~~~--d~~d~~~l~   65 (249)
                      |.|-+|+++++.|...|. ++++++++.-.....-..              .....+.+..+.+++...  .+ +.+.+.
T Consensus        28 G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~  106 (202)
T TIGR02356        28 GAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV-TAENLE  106 (202)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC-CHHHHH
Confidence            567899999999999996 888888875432111000              011233344455554433  33 445677


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      +.++  ++|+||.+... ...-..+-++|+ ...++|+.++.+.+|
T Consensus       107 ~~~~--~~D~Vi~~~d~-~~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356       107 LLIN--NVDLVLDCTDN-FATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             HHHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            7887  99999988754 232233444466 556899888766655

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK04148 hypothetical protein; Provisional

Probab=96.02  E-value=0.017  Score=40.05  Aligned_cols=76  Identities=13%  Similarity=0.153  Sum_probs=53.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+| .|.+++..|.+.|++|++++.++.......           ...++++.+|+.+++-  ++-+  ++|.|+.+-..
T Consensus        24 G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-----------~~~~~~v~dDlf~p~~--~~y~--~a~liysirpp   87 (134)
T PRK04148         24 GIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-----------KLGLNAFVDDLFNPNL--EIYK--NAKLIYSIRPP   87 (134)
T ss_pred             Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HhCCeEEECcCCCCCH--HHHh--cCCEEEEeCCC
Confidence            457 888999999999999999999987532111           2467899999998653  2233  88998876553


Q ss_pred             ChhhhHHHHHhCC
Q 025702           83 EADEVEPILDALP   95 (249)
Q Consensus        83 ~~~~~~~~~~a~~   95 (249)
                       .+-...+++.++
T Consensus        88 -~el~~~~~~la~   99 (134)
T PRK04148         88 -RDLQPFILELAK   99 (134)
T ss_pred             -HHHHHHHHHHHH
Confidence             344555566555

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=95.97  E-value=0.063  Score=41.73  Aligned_cols=81  Identities=21%  Similarity=0.157  Sum_probs=63.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|||+ =|+.|++.|.+.|++|++.+-.....   ..          ...+.++.+-+.|.+.+.+++++.+++.||+..
T Consensus         8 lgGT~-egr~la~~L~~~g~~v~~Svat~~g~---~~----------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDAT   73 (248)
T PRK08057          8 LGGTS-EARALARALAAAGVDIVLSLAGRTGG---PA----------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDAT   73 (248)
T ss_pred             EechH-HHHHHHHHHHhCCCeEEEEEccCCCC---cc----------cCCceEEECCCCCHHHHHHHHHHCCCCEEEECC
Confidence            35665 69999999999999988887776442   11          246777888888999999999999999999886


Q ss_pred             CC-ChhhhHHHHHhCC
Q 025702           81 GR-EADEVEPILDALP   95 (249)
Q Consensus        81 ~~-~~~~~~~~~~a~~   95 (249)
                      -. .....+++.++|+
T Consensus        74 HPfA~~is~~a~~ac~   89 (248)
T PRK08057         74 HPYAAQISANAAAACR   89 (248)
T ss_pred             CccHHHHHHHHHHHHH
Confidence            54 4556777888877

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.96  E-value=0.013  Score=47.42  Aligned_cols=144  Identities=14%  Similarity=0.123  Sum_probs=75.9

Q ss_pred             CCCcccchHHHHHHHHHcCC-------eEEEEecCCCccccCCCCCCchhhhhc----cCceEEEEeccCCHHHHHHhhh
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEF----SSKILHLKGDRKDYDFVKSSLS   69 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~d~~d~~~l~~~~~   69 (249)
                      +|++|.+|++++..|+..|.       ++.+++..+....   ......++...    ..++.+.   -.+.    +.++
T Consensus         8 iGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~---a~g~a~Dl~~~~~~~~~~~~i~---~~~~----~~~~   77 (322)
T cd01338           8 TGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKA---LEGVAMELEDCAFPLLAEIVIT---DDPN----VAFK   77 (322)
T ss_pred             ECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccc---cceeehhhhhccccccCceEEe---cCcH----HHhC
Confidence            58889999999999998874       7888888543310   00000111111    0122221   1222    3344


Q ss_pred             hCCCcEEEecCCCCh--------------hhhHHHHHhCC--C--CCeEEEeeccc-cccCCCCCCCCCCCCCCCCCcc-
Q 025702           70 AKGFDVVYDINGREA--------------DEVEPILDALP--N--LEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        70 ~~~~d~Vi~~~~~~~--------------~~~~~~~~a~~--~--~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                        ++|+||.++|...              ...+.+...+.  .  ...+|.+|-.- +..   ...........+...+ 
T Consensus        78 --daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t---~~~~k~sg~~p~~~ViG  152 (322)
T cd01338          78 --DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNA---LIAMKNAPDIPPDNFTA  152 (322)
T ss_pred             --CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHH---HHHHHHcCCCChHheEE
Confidence              9999999998732              12344444443  2  33556555311 000   0000011012233334 


Q ss_pred             cchHHHHHHH----hhcCCcEEEeecceeeCCCC
Q 025702          130 KGKLNTESVL----ESKGVNWTSLRPVYIYGPLN  159 (249)
Q Consensus       130 ~~k~~~e~~~----~~~~~~~~~~r~~~v~g~~~  159 (249)
                      .+++..+++.    +..+++...+|..+|||+..
T Consensus       153 ~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         153 MTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             ehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            4565555543    45688888899889999863

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.93  E-value=0.096  Score=42.83  Aligned_cols=104  Identities=19%  Similarity=0.278  Sum_probs=64.8

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC----------------CchhhhhccCce--EEEEeccCCHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE----------------SDQEFAEFSSKI--LHLKGDRKDYDF   63 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~~~v--~~~~~d~~d~~~   63 (249)
                      |.|.+|+.++..|...|. ++++++++.-.....-...                ....+.+..+.+  +.+..+++ .+.
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~~~-~~~  109 (339)
T PRK07688         31 GAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQDVT-AEE  109 (339)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEeccCC-HHH
Confidence            458899999999999997 8999988753321111000                012233334444  44444554 456


Q ss_pred             HHHhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeecccccc
Q 025702           64 VKSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        64 l~~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      +.++++  ++|+||.+... ...-..+-++|. ...++|+.++.+.+|
T Consensus       110 ~~~~~~--~~DlVid~~Dn-~~~r~~ln~~~~~~~iP~i~~~~~g~~G  154 (339)
T PRK07688        110 LEELVT--GVDLIIDATDN-FETRFIVNDAAQKYGIPWIYGACVGSYG  154 (339)
T ss_pred             HHHHHc--CCCEEEEcCCC-HHHHHHHHHHHHHhCCCEEEEeeeeeee
Confidence            677787  89999998764 232233444455 456899988777665

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.91  E-value=0.031  Score=45.57  Aligned_cols=90  Identities=14%  Similarity=0.118  Sum_probs=51.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEE--EecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTL--FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~--~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +||||++|+.+++.|.+++|.+.-  ..++.+...+.+.          ..+.   ..++.+.+.. . ++  ++|+||.
T Consensus        10 vGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~----------~~~~---~l~~~~~~~~-~-~~--~vD~vFl   72 (336)
T PRK05671         10 VGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP----------FAGK---NLRVREVDSF-D-FS--QVQLAFF   72 (336)
T ss_pred             EccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec----------cCCc---ceEEeeCChH-H-hc--CCCEEEE
Confidence            599999999999999987764333  2233322111111          0121   2233322221 1 45  8999999


Q ss_pred             cCCCChhhhHHHHHhCC-CCCeEEEeeccccc
Q 025702           79 INGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~  109 (249)
                      +.+.  .....++..+. ...++|=.|+..-+
T Consensus        73 a~p~--~~s~~~v~~~~~~G~~VIDlS~~fR~  102 (336)
T PRK05671         73 AAGA--AVSRSFAEKARAAGCSVIDLSGALPS  102 (336)
T ss_pred             cCCH--HHHHHHHHHHHHCCCeEEECchhhcC
Confidence            8874  34455666653 33468877876643

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.90  E-value=0.015  Score=46.38  Aligned_cols=84  Identities=18%  Similarity=0.209  Sum_probs=54.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++..|++......         .  ..+...     .+.+.+.+.++  ++|+||++...
T Consensus       158 G~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~---------~--~~g~~~-----~~~~~l~~~l~--~aDiVint~P~  219 (287)
T TIGR02853       158 GFGRTGMTIARTFSALGARVFVGARSSADLARI---------T--EMGLIP-----FPLNKLEEKVA--EIDIVINTIPA  219 (287)
T ss_pred             cChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------H--HCCCee-----ecHHHHHHHhc--cCCEEEECCCh
Confidence            458899999999999999999999986542110         0  012221     12345667777  99999998765


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeec
Q 025702           83 EADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ... ....++.++...-+|-++|
T Consensus       220 ~ii-~~~~l~~~k~~aliIDlas  241 (287)
T TIGR02853       220 LVL-TADVLSKLPKHAVIIDLAS  241 (287)
T ss_pred             HHh-CHHHHhcCCCCeEEEEeCc
Confidence            322 2445566664445665664

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.79  E-value=0.018  Score=47.23  Aligned_cols=96  Identities=15%  Similarity=0.111  Sum_probs=53.6

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEE-ecCCCccccCCCCCCchhhhhccCceEEE-EeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +||||++|..+++.|.+. ++++..+ ++..+. .+.+..        ..+.+... ..++.+. ...++++  ++|+||
T Consensus         6 iGATG~vG~ellr~L~~hP~~el~~l~~s~~sa-gk~~~~--------~~~~l~~~~~~~~~~~-~~~~~~~--~~DvVf   73 (346)
T TIGR01850         6 VGASGYTGGELLRLLLNHPEVEITYLVSSRESA-GKPVSE--------VHPHLRGLVDLNLEPI-DEEEIAE--DADVVF   73 (346)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEeccchhc-CCChHH--------hCccccccCCceeecC-CHHHhhc--CCCEEE
Confidence            599999999999999987 5788855 433321 111100        00111111 1112211 1223334  799999


Q ss_pred             ecCCCChhhhHHHHHhC-CCCCeEEEeecccccc
Q 025702           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVYL  110 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~-~~~~~~i~~Ss~~v~~  110 (249)
                      .+.+.  .....++..+ ....++|-.|+..-+.
T Consensus        74 ~alP~--~~s~~~~~~~~~~G~~VIDlS~~fR~~  105 (346)
T TIGR01850        74 LALPH--GVSAELAPELLAAGVKVIDLSADFRLK  105 (346)
T ss_pred             ECCCc--hHHHHHHHHHHhCCCEEEeCChhhhcC
Confidence            88875  3455555554 3346888888766543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.76  E-value=0.021  Score=50.14  Aligned_cols=69  Identities=10%  Similarity=0.132  Sum_probs=53.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+++++.|.++|++|++++++++..... .          ..+...+.+|.+|++.++++-- .++|.++-+.+.
T Consensus       424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~-~----------~~g~~~i~GD~~~~~~L~~a~i-~~a~~viv~~~~  491 (558)
T PRK10669        424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL-R----------ERGIRAVLGNAANEEIMQLAHL-DCARWLLLTIPN  491 (558)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH-H----------HCCCeEEEcCCCCHHHHHhcCc-cccCEEEEEcCC
Confidence            668999999999999999999999987653221 1          2578899999999998875432 388988766554


Q ss_pred             C
Q 025702           83 E   83 (249)
Q Consensus        83 ~   83 (249)
                      +
T Consensus       492 ~  492 (558)
T PRK10669        492 G  492 (558)
T ss_pred             h
Confidence            3

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.74  E-value=0.027  Score=46.17  Aligned_cols=94  Identities=19%  Similarity=0.144  Sum_probs=54.6

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEE-EeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +||||++|+.+++.|.+. ++++..+.+.... .+.+..        ..+.+..+ ..++.+.+..  ..+  ++|+||.
T Consensus         8 iGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~~--------~~~~~~~~~~~~~~~~~~~--~~~--~vD~Vf~   74 (343)
T PRK00436          8 VGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLSD--------VHPHLRGLVDLVLEPLDPE--ILA--GADVVFL   74 (343)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchHH--------hCcccccccCceeecCCHH--Hhc--CCCEEEE
Confidence            599999999999999987 5788887774322 111110        00111111 1123333222  234  7999998


Q ss_pred             cCCCChhhhHHHHHhC-CCCCeEEEeeccccc
Q 025702           79 INGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~-~~~~~~i~~Ss~~v~  109 (249)
                      +.+.  ....+++.++ +...++|=.|+..-+
T Consensus        75 alP~--~~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         75 ALPH--GVSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             CCCc--HHHHHHHHHHHhCCCEEEECCcccCC
Confidence            8765  3445555554 344688888876655

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.74  E-value=0.085  Score=42.61  Aligned_cols=80  Identities=15%  Similarity=0.239  Sum_probs=53.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|...|.+|++.+|.....                .++..+    ...+++.++++  ++|+|+.+...
T Consensus       143 G~G~IG~~vA~~l~afG~~V~~~~~~~~~~----------------~~~~~~----~~~~~l~e~l~--~aDvvv~~lPl  200 (312)
T PRK15469        143 GAGVLGSKVAQSLQTWGFPLRCWSRSRKSW----------------PGVQSF----AGREELSAFLS--QTRVLINLLPN  200 (312)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCC----------------CCceee----cccccHHHHHh--cCCEEEECCCC
Confidence            679999999999999999999999865431                122111    13456778887  89999988775


Q ss_pred             ChhhhHH-----HHHhCCCCCeEEEeec
Q 025702           83 EADEVEP-----ILDALPNLEQFIYCSS  105 (249)
Q Consensus        83 ~~~~~~~-----~~~a~~~~~~~i~~Ss  105 (249)
                      +. .++.     .++.++...-||.++=
T Consensus       201 t~-~T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        201 TP-ETVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CH-HHHHHhHHHHHhcCCCCcEEEECCC
Confidence            43 2333     3444553346666653

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.68  E-value=0.049  Score=42.71  Aligned_cols=29  Identities=10%  Similarity=0.050  Sum_probs=22.8

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCC
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGK   29 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~   29 (249)
                      +|++|.+|+.+++.+.+. +.++.++....
T Consensus         7 iG~~G~mG~~i~~~l~~~~~~elvav~d~~   36 (257)
T PRK00048          7 AGASGRMGRELIEAVEAAEDLELVAAVDRP   36 (257)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            478899999999998875 68887765443

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=95.66  E-value=0.034  Score=38.11  Aligned_cols=96  Identities=17%  Similarity=0.144  Sum_probs=52.0

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceE-EEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|.+|..+++.|.+. ++++.++..++....+...        ...+.+. .+..++ +.+.+.  ..  ++|+||-
T Consensus         5 iG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~--~~--~~DvV~~   71 (122)
T smart00859        5 VGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVS--------EAGPHLKGEVVLEL-EPEDFE--EL--AVDIVFL   71 (122)
T ss_pred             ECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHH--------HHCccccccccccc-ccCChh--hc--CCCEEEE
Confidence            488999999999999995 7888888443322111111        0011221 111122 222222  12  8899998


Q ss_pred             cCCCChhhh--HHHHHhCCCCCeEEEeeccccc
Q 025702           79 INGREADEV--EPILDALPNLEQFIYCSSAGVY  109 (249)
Q Consensus        79 ~~~~~~~~~--~~~~~a~~~~~~~i~~Ss~~v~  109 (249)
                      +.+......  ..+..+++..+.+|.+||..-+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~g~~viD~s~~~~~  104 (122)
T smart00859       72 ALPHGVSKEIAPLLPKAAEAGVKVIDLSSAFRM  104 (122)
T ss_pred             cCCcHHHHHHHHHHHhhhcCCCEEEECCccccC
Confidence            877542211  1233334545678888876543

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.61  E-value=0.047  Score=40.06  Aligned_cols=104  Identities=14%  Similarity=0.165  Sum_probs=61.8

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCc---cccCCCC--C--------CchhhhhccCceEE--EEeccCCHHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAP---IAQQLPG--E--------SDQEFAEFSSKILH--LKGDRKDYDFVKS   66 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~---~~~~~~~--~--------~~~~~~~~~~~v~~--~~~d~~d~~~l~~   66 (249)
                      |.|-+|+.+++.|...|. ++++++.+.-.   .......  .        ....+.+..+.+++  +...+ +.+.+.+
T Consensus         6 G~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~~~~~~~   84 (174)
T cd01487           6 GAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-DENNLEG   84 (174)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-ChhhHHH
Confidence            457799999999999996 58998887622   1111100  0        01233334454544  33344 3456777


Q ss_pred             hhhhCCCcEEEecCCCChhhhHHHHHhCC-C-CCeEEEeecccccc
Q 025702           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL  110 (249)
Q Consensus        67 ~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~-~~~~i~~Ss~~v~~  110 (249)
                      .++  ++|+||.+... ...-..+.+.+. . ..++|+.+..+-|+
T Consensus        85 ~l~--~~DlVi~~~d~-~~~r~~i~~~~~~~~~ip~i~~~~~~~~~  127 (174)
T cd01487          85 LFG--DCDIVVEAFDN-AETKAMLAESLLGNKNKPVVCASGMAGFG  127 (174)
T ss_pred             Hhc--CCCEEEECCCC-HHHHHHHHHHHHHHCCCCEEEEehhhccC
Confidence            887  99999998443 333333555544 3 56788776554444

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.61  E-value=0.036  Score=38.26  Aligned_cols=88  Identities=18%  Similarity=0.222  Sum_probs=51.0

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEe------------------c-cC
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG------------------D-RK   59 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------------------d-~~   59 (249)
                      +|+||.||+...+-+.+..  ++|++++-..+...  +    ..+..++.++.-.+..                  . +.
T Consensus         4 LGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~--L----~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~   77 (129)
T PF02670_consen    4 LGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEK--L----AEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLS   77 (129)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHH--H----HHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHH--H----HHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEe
Confidence            5999999999999999886  89999987554310  0    0111122222211110                  0 12


Q ss_pred             CHHHHHHhhhhCCCcEEEecCCCChhhhHHHHHhCC
Q 025702           60 DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP   95 (249)
Q Consensus        60 d~~~l~~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~   95 (249)
                      ..+.+.++.+..++|+|++...- ..+....+.+++
T Consensus        78 G~~~l~~~~~~~~~D~vv~Ai~G-~aGL~pt~~Ai~  112 (129)
T PF02670_consen   78 GPEGLEELAEEPEVDIVVNAIVG-FAGLKPTLAAIK  112 (129)
T ss_dssp             SHHHHHHHHTHTT-SEEEE--SS-GGGHHHHHHHHH
T ss_pred             ChHHHHHHhcCCCCCEEEEeCcc-cchHHHHHHHHH
Confidence            35666677766688998876332 456666666666

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.60  E-value=0.028  Score=45.02  Aligned_cols=84  Identities=19%  Similarity=0.218  Sum_probs=54.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.++..|...|.+|++++|++......         .  ..+..++     +.+.+.+.+.  ++|+||++.+.
T Consensus       159 G~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~---------~--~~G~~~~-----~~~~l~~~l~--~aDiVI~t~p~  220 (296)
T PRK08306        159 GFGRTGMTLARTLKALGANVTVGARKSAHLARI---------T--EMGLSPF-----HLSELAEEVG--KIDIIFNTIPA  220 (296)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------H--HcCCeee-----cHHHHHHHhC--CCCEEEECCCh
Confidence            358899999999999999999999986542110         0  1123322     2345667777  89999998764


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeec
Q 025702           83 EADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      . ......++.++...-+|-+++
T Consensus       221 ~-~i~~~~l~~~~~g~vIIDla~  242 (296)
T PRK08306        221 L-VLTKEVLSKMPPEALIIDLAS  242 (296)
T ss_pred             h-hhhHHHHHcCCCCcEEEEEcc
Confidence            2 234555666664445665654

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.57  E-value=0.043  Score=37.91  Aligned_cols=25  Identities=32%  Similarity=0.496  Sum_probs=22.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTR   27 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r   27 (249)
                      |.|.+|++|++.|.+.||+|..+..
T Consensus        17 GaGrVG~~La~aL~~ag~~v~~v~s   41 (127)
T PF10727_consen   17 GAGRVGTALARALARAGHEVVGVYS   41 (127)
T ss_dssp             CTSCCCCHHHHHHHHTTSEEEEESS
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEEe
Confidence            4599999999999999999988753

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.57  E-value=0.19  Score=41.17  Aligned_cols=102  Identities=16%  Similarity=0.274  Sum_probs=64.2

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC-----------------CchhhhhccCce--EEEEeccCCHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE-----------------SDQEFAEFSSKI--LHLKGDRKDYD   62 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~-----------------~~~~~~~~~~~v--~~~~~d~~d~~   62 (249)
                      |.|-+|+++++.|...|. ++++++++.-.... +...                 ....+.+..+.+  +.+..|++ .+
T Consensus        31 G~GglGs~va~~La~aGvg~i~lvD~D~ve~sN-L~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~~-~~  108 (338)
T PRK12475         31 GAGALGAANAEALVRAGIGKLTIADRDYVEWSN-LQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDVT-VE  108 (338)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCcccccc-cCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccCC-HH
Confidence            457799999999999997 78888887643211 1110                 012233334444  44555664 45


Q ss_pred             HHHHhhhhCCCcEEEecCCCChhhhHHHHH-hCC-CCCeEEEeecccccc
Q 025702           63 FVKSSLSAKGFDVVYDINGREADEVEPILD-ALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        63 ~l~~~~~~~~~d~Vi~~~~~~~~~~~~~~~-a~~-~~~~~i~~Ss~~v~~  110 (249)
                      .++++++  ++|+||.+...  ..++.++. +|. ...++|+.+..+.+|
T Consensus       109 ~~~~~~~--~~DlVid~~D~--~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        109 ELEELVK--EVDLIIDATDN--FDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             HHHHHhc--CCCEEEEcCCC--HHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            6778887  89999998864  33444443 355 456888887766655

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=95.55  E-value=0.094  Score=43.62  Aligned_cols=66  Identities=15%  Similarity=0.045  Sum_probs=50.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|..|..+++++.+.|++|++++.++......+.           .  +.+..|..|.+.+.++++.+++|.|+....
T Consensus         6 G~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a-----------d--~~~~~~~~d~~~l~~~~~~~~id~v~~~~e   71 (380)
T TIGR01142         6 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-----------H--RSYVINMLDGDALRAVIEREKPDYIVPEIE   71 (380)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC-----------c--eEEEcCCCCHHHHHHHHHHhCCCEEEeccC
Confidence            36899999999999999999999998755322111           1  345568889999999998788999986543

This enzyme is an alternative to PurN (TIGR00639)

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.53  E-value=0.029  Score=38.64  Aligned_cols=90  Identities=18%  Similarity=0.127  Sum_probs=48.5

Q ss_pred             CCCcccchHHHHHHHHH-cCCeEEEEe-cCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVK-EGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~-~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      .|++|.+|+.+++.+++ .++++.+.. |+++.....-    -..+.    +..  ...+.-.+.++++++  .+|+||+
T Consensus         6 ~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d----~g~~~----~~~--~~~~~v~~~l~~~~~--~~DVvID   73 (124)
T PF01113_consen    6 VGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKD----VGELA----GIG--PLGVPVTDDLEELLE--EADVVID   73 (124)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSB----CHHHC----TSS--T-SSBEBS-HHHHTT--H-SEEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccch----hhhhh----CcC--CcccccchhHHHhcc--cCCEEEE
Confidence            38889999999999999 578866555 4442211000    00000    000  011111256677777  5999999


Q ss_pred             cCCCChhhhHHHHHhCC-CCCeEEEee
Q 025702           79 INGREADEVEPILDALP-NLEQFIYCS  104 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~-~~~~~i~~S  104 (249)
                      +.  ........++.+. ...++|.-+
T Consensus        74 fT--~p~~~~~~~~~~~~~g~~~ViGT   98 (124)
T PF01113_consen   74 FT--NPDAVYDNLEYALKHGVPLVIGT   98 (124)
T ss_dssp             ES---HHHHHHHHHHHHHHT-EEEEE-
T ss_pred             cC--ChHHhHHHHHHHHhCCCCEEEEC
Confidence            98  4566666666654 333444433

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.42  E-value=0.015  Score=42.92  Aligned_cols=85  Identities=16%  Similarity=0.134  Sum_probs=54.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|..-|.+|++.+|........ .          ...+        ....++++++  .+|+|+.+...
T Consensus        43 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~----------~~~~--------~~~~l~ell~--~aDiv~~~~pl  101 (178)
T PF02826_consen   43 GYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-D----------EFGV--------EYVSLDELLA--QADIVSLHLPL  101 (178)
T ss_dssp             STSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-H----------HTTE--------EESSHHHHHH--H-SEEEE-SSS
T ss_pred             EEcCCcCeEeeeeecCCceeEEecccCChhhhc-c----------cccc--------eeeehhhhcc--hhhhhhhhhcc
Confidence            678999999999999999999999998752100 0          0111        1234556777  88999977665


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +..    .....++.++....||.++-..+
T Consensus       102 t~~T~~li~~~~l~~mk~ga~lvN~aRG~~  131 (178)
T PF02826_consen  102 TPETRGLINAEFLAKMKPGAVLVNVARGEL  131 (178)
T ss_dssp             STTTTTSBSHHHHHTSTTTEEEEESSSGGG
T ss_pred             ccccceeeeeeeeeccccceEEEeccchhh
Confidence            322    24556677775557777775554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.39  E-value=0.053  Score=43.18  Aligned_cols=92  Identities=16%  Similarity=0.174  Sum_probs=59.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|+.| +|+-=++....-|++|++++++..+..+.+.          .-+.+.+..-..|++.++++.+  --|.++|+.
T Consensus       188 ~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~----------~LGAd~fv~~~~d~d~~~~~~~--~~dg~~~~v  254 (360)
T KOG0023|consen  188 VGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK----------SLGADVFVDSTEDPDIMKAIMK--TTDGGIDTV  254 (360)
T ss_pred             ecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH----------hcCcceeEEecCCHHHHHHHHH--hhcCcceee
Confidence            36666 7777676666679999999999866443332          1245554444458888887776  445555554


Q ss_pred             CC-ChhhhHHHHHhCCCCCeEEEeec
Q 025702           81 GR-EADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        81 ~~-~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .. ..-....+++.++...++|+++-
T Consensus       255 ~~~a~~~~~~~~~~lk~~Gt~V~vg~  280 (360)
T KOG0023|consen  255 SNLAEHALEPLLGLLKVNGTLVLVGL  280 (360)
T ss_pred             eeccccchHHHHHHhhcCCEEEEEeC
Confidence            42 12345567777886678998883

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.36  E-value=0.26  Score=38.23  Aligned_cols=103  Identities=16%  Similarity=0.143  Sum_probs=64.5

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC---------------CchhhhhccCceEEEEecc-CCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE---------------SDQEFAEFSSKILHLKGDR-KDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~---------------~~~~~~~~~~~v~~~~~d~-~d~~~l~   65 (249)
                      |.|-+|+.++..|...|. ++++++.+.-.... +...               ....+.+..+.+++...+- .+.+.+.
T Consensus        31 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sN-L~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~~~~~~  109 (240)
T TIGR02355        31 GLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSN-LQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLDDAELA  109 (240)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCcccccC-cccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCCHHHHH
Confidence            567799999999999994 67777776555221 1111               0123334455655554432 2456677


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHH-HhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~-~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      ++++  ++|+||.+...  ..++..+ ++|. ...++|+.++.+.+|
T Consensus       110 ~~~~--~~DlVvd~~D~--~~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       110 ALIA--EHDIVVDCTDN--VEVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             HHhh--cCCEEEEcCCC--HHHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            7887  99999998865  2344444 4465 556888877655544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.35  E-value=0.053  Score=44.37  Aligned_cols=89  Identities=13%  Similarity=0.076  Sum_probs=50.4

Q ss_pred             CCCcccchHHHHHHHHHcCCe---EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +||||++|+.|++.|.+++|.   +..+...... .+...          ..+..+...++. .+    .++  ++|+||
T Consensus        13 vGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa-Gk~~~----------~~~~~~~v~~~~-~~----~~~--~~D~vf   74 (344)
T PLN02383         13 VGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA-GKKVT----------FEGRDYTVEELT-ED----SFD--GVDIAL   74 (344)
T ss_pred             EcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC-CCeee----------ecCceeEEEeCC-HH----HHc--CCCEEE
Confidence            499999999999999997773   3333322111 11111          012233333332 22    234  899999


Q ss_pred             ecCCCChhhhHHHHHhC-CCCCeEEEeeccccc
Q 025702           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~-~~~~~~i~~Ss~~v~  109 (249)
                      .+++..  ....+...+ ....++|=.|+..-+
T Consensus        75 ~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR~  105 (344)
T PLN02383         75 FSAGGS--ISKKFGPIAVDKGAVVVDNSSAFRM  105 (344)
T ss_pred             ECCCcH--HHHHHHHHHHhCCCEEEECCchhhc
Confidence            888753  444454443 333478878876644

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.35  E-value=0.015  Score=43.42  Aligned_cols=32  Identities=31%  Similarity=0.325  Sum_probs=28.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      +||+|.+|..|++.|.+.||+|++-+|+..+.
T Consensus         6 i~GtGniG~alA~~~a~ag~eV~igs~r~~~~   37 (211)
T COG2085           6 IIGTGNIGSALALRLAKAGHEVIIGSSRGPKA   37 (211)
T ss_pred             EeccChHHHHHHHHHHhCCCeEEEecCCChhH
Confidence            48999999999999999999999997776653

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=95.30  E-value=0.055  Score=43.92  Aligned_cols=62  Identities=15%  Similarity=0.133  Sum_probs=49.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |.|.+|+.++.+-...|++|++++-+++.......             -..+..++.|.++++++.+  ++|+|-.=
T Consensus         8 GGGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------------~~~i~~~~dD~~al~ela~--~~DViT~E   69 (375)
T COG0026           8 GGGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------------DRVIVAAYDDPEALRELAA--KCDVITYE   69 (375)
T ss_pred             cCcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------------cceeecCCCCHHHHHHHHh--hCCEEEEe
Confidence            56999999999999999999999987776443332             2345677789999999998  99998853

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.26  E-value=0.35  Score=36.40  Aligned_cols=97  Identities=13%  Similarity=0.152  Sum_probs=56.4

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecC---CCccccCCCC--CC--------chhhhhccCce--EEEEeccCCHHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRG---KAPIAQQLPG--ES--------DQEFAEFSSKI--LHLKGDRKDYDFVKS   66 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~---~~~~~~~~~~--~~--------~~~~~~~~~~v--~~~~~d~~d~~~l~~   66 (249)
                      |.|-+|+.++..|...|. ++++++++   .+........  ..        ...+....+.+  +.+..++ +.+.+.+
T Consensus        28 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i-~~~~~~~  106 (200)
T TIGR02354        28 GLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKI-TEENIDK  106 (200)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeC-CHhHHHH
Confidence            457799999999999997 69999988   4332221110  00        12222333433  4444455 4566778


Q ss_pred             hhhhCCCcEEEecCCCChhhhHH-HHHhCC---CCCeEEEee
Q 025702           67 SLSAKGFDVVYDINGREADEVEP-ILDALP---NLEQFIYCS  104 (249)
Q Consensus        67 ~~~~~~~d~Vi~~~~~~~~~~~~-~~~a~~---~~~~~i~~S  104 (249)
                      .++  ++|+||.+. . ...++. +.+.+.   +...++..|
T Consensus       107 ~~~--~~DlVi~a~-D-n~~~k~~l~~~~~~~~~~~~ii~~~  144 (200)
T TIGR02354       107 FFK--DADIVCEAF-D-NAEAKAMLVNAVLEKYKDKYLIAAS  144 (200)
T ss_pred             Hhc--CCCEEEECC-C-CHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            887  899999983 2 333443 344443   333445433

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.24  E-value=0.08  Score=43.54  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=25.3

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~   31 (249)
                      +||||++|+.+++.|++.. .++.++.++.+.
T Consensus         9 ~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          9 LGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             ECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            5999999999999999876 488888565544

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.20  E-value=0.22  Score=37.87  Aligned_cols=104  Identities=13%  Similarity=0.147  Sum_probs=61.4

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccc---cCCC--CC--------CchhhhhccCceEE--EEeccCCHHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA---QQLP--GE--------SDQEFAEFSSKILH--LKGDRKDYDFVKS   66 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~---~~~~--~~--------~~~~~~~~~~~v~~--~~~d~~d~~~l~~   66 (249)
                      |.|-+|+.+++.|...|. ++++++.+.-...   ....  ..        ....+....+.+++  +...++ .+.+.+
T Consensus        35 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~-~~~~~~  113 (212)
T PRK08644         35 GAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKID-EDNIEE  113 (212)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecC-HHHHHH
Confidence            467899999999999996 5888887743211   1100  00        01222333444444  333443 455667


Q ss_pred             hhhhCCCcEEEecCCCChhhhHHHHHhCC-C-CCeEEEeecccccc
Q 025702           67 SLSAKGFDVVYDINGREADEVEPILDALP-N-LEQFIYCSSAGVYL  110 (249)
Q Consensus        67 ~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~-~~~~i~~Ss~~v~~  110 (249)
                      .++  ++|+||.+... ...-..+.+.|. . ..++|+.+...-|+
T Consensus       114 ~~~--~~DvVI~a~D~-~~~r~~l~~~~~~~~~~p~I~~~~~~~~~  156 (212)
T PRK08644        114 LFK--DCDIVVEAFDN-AETKAMLVETVLEHPGKKLVAASGMAGYG  156 (212)
T ss_pred             HHc--CCCEEEECCCC-HHHHHHHHHHHHHhCCCCEEEeehhhccC
Confidence            787  89999988543 333334555555 4 67888877555444

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.20  E-value=0.036  Score=51.55  Aligned_cols=69  Identities=14%  Similarity=-0.002  Sum_probs=50.8

Q ss_pred             CcccchHHHHHHHHHcC-Ce-------------EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhh
Q 025702            3 GTRFIGVFLSRLLVKEG-HQ-------------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL   68 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~   68 (249)
                      |+|++|+..++.|.+.. .+             |.+.+++...... +        .+..++++.+..|+.|.+++.+++
T Consensus       576 GAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~-l--------a~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        576 GAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKE-T--------VEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             CCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHH-H--------HHhcCCCceEEeecCCHHHHHHhh
Confidence            45999999999998753 33             6667766544211 1        111236778899999999999998


Q ss_pred             hhCCCcEEEecCCC
Q 025702           69 SAKGFDVVYDINGR   82 (249)
Q Consensus        69 ~~~~~d~Vi~~~~~   82 (249)
                      +  ++|+||++...
T Consensus       647 ~--~~DaVIsalP~  658 (1042)
T PLN02819        647 S--QVDVVISLLPA  658 (1042)
T ss_pred             c--CCCEEEECCCc
Confidence            8  89999998775

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=95.12  E-value=0.069  Score=44.34  Aligned_cols=61  Identities=18%  Similarity=0.152  Sum_probs=47.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |+|.+|+.++.++.+.|++|++++.++........             -+.+.+|+.|.+.+.++.+  .+|+|..
T Consensus         9 G~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a-------------d~~~~~~~~D~~~l~~~a~--~~dvit~   69 (372)
T PRK06019          9 GGGQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA-------------DEVIVADYDDVAALRELAE--QCDVITY   69 (372)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC-------------ceEEecCCCCHHHHHHHHh--cCCEEEe
Confidence            34899999999999999999999987655322211             1345678999999999988  8898764

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.07  E-value=0.25  Score=38.01  Aligned_cols=104  Identities=13%  Similarity=0.130  Sum_probs=62.4

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCC-------C-------CchhhhhccCceE--EEEeccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG-------E-------SDQEFAEFSSKIL--HLKGDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~-------~-------~~~~~~~~~~~v~--~~~~d~~d~~~l~   65 (249)
                      |.|-+|+++++.|...|. ++++++.+.-.....-..       .       ....+.+..+.++  .+..++ +.+.+.
T Consensus        28 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-~~~~~~  106 (228)
T cd00757          28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-DAENAE  106 (228)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-CHHHHH
Confidence            567799999999999995 677776554332111110       0       0123333444444  444444 356677


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      +.++  ++|+||.+... ...-..+-++|. ...++|+.+..+.+|
T Consensus       107 ~~~~--~~DvVi~~~d~-~~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757         107 ELIA--GYDLVLDCTDN-FATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             HHHh--CCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7887  89999998774 333333444466 556888887766554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.06  E-value=0.092  Score=42.75  Aligned_cols=93  Identities=22%  Similarity=0.217  Sum_probs=61.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|+..++.+...|+.+++.+.++++.. .+.        +  -+... ..|+.+   .+.++++....++|+|+
T Consensus       149 ~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~--------~--lGAd~-vi~y~~~~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         149 HGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK--------E--LGADH-VINYREEDFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             ecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH--------h--cCCCE-EEcCCcccHHHHHHHHcCCCCceEEE
Confidence            589999999999999999977777777765532 111        0  12211 113333   34455555545799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      ++.+.  ......+.+++...+++.+...+
T Consensus       217 D~vG~--~~~~~~l~~l~~~G~lv~ig~~~  244 (326)
T COG0604         217 DTVGG--DTFAASLAALAPGGRLVSIGALS  244 (326)
T ss_pred             ECCCH--HHHHHHHHHhccCCEEEEEecCC
Confidence            99884  55566777877447888877543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.00  E-value=0.084  Score=42.78  Aligned_cols=84  Identities=19%  Similarity=0.201  Sum_probs=59.4

Q ss_pred             ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCCCh
Q 025702            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA   84 (249)
Q Consensus         5 G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~~~   84 (249)
                      |-+|..-++.+...|.+|++++|++++......           -+...+. +.+|.+.+..+-+  .+|.++.+++  .
T Consensus       176 GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-----------lGAd~~i-~~~~~~~~~~~~~--~~d~ii~tv~--~  239 (339)
T COG1064         176 GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-----------LGADHVI-NSSDSDALEAVKE--IADAIIDTVG--P  239 (339)
T ss_pred             cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-----------hCCcEEE-EcCCchhhHHhHh--hCcEEEECCC--h
Confidence            468888888888889999999999987422111           1233222 3236666666655  4999999999  6


Q ss_pred             hhhHHHHHhCCCCCeEEEee
Q 025702           85 DEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        85 ~~~~~~~~a~~~~~~~i~~S  104 (249)
                      ....+.+++++...+++.++
T Consensus       240 ~~~~~~l~~l~~~G~~v~vG  259 (339)
T COG1064         240 ATLEPSLKALRRGGTLVLVG  259 (339)
T ss_pred             hhHHHHHHHHhcCCEEEEEC
Confidence            67777888888666888777

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.88  E-value=0.3  Score=38.02  Aligned_cols=103  Identities=16%  Similarity=0.143  Sum_probs=61.7

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEEEE--eccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLK--GDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~~--~d~~d~~~l~   65 (249)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-...              ....+.+..+.+++..  ..+ +.+.+.
T Consensus        39 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i-~~~~~~  117 (245)
T PRK05690         39 GLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL-DDDELA  117 (245)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence            347899999999999995 6777776654421111100              0123334455554443  333 355667


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHH-HHHhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~-~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      ++++  ++|+||.+... . ..+. +-++|. ...++|+.++.+-+|
T Consensus       118 ~~~~--~~DiVi~~~D~-~-~~r~~ln~~~~~~~ip~v~~~~~g~~G  160 (245)
T PRK05690        118 ALIA--GHDLVLDCTDN-V-ATRNQLNRACFAAKKPLVSGAAIRMEG  160 (245)
T ss_pred             HHHh--cCCEEEecCCC-H-HHHHHHHHHHHHhCCEEEEeeeccCCc
Confidence            7787  99999998764 2 3444 444465 556888766554433

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.87  E-value=0.051  Score=48.11  Aligned_cols=80  Identities=13%  Similarity=0.231  Sum_probs=58.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|-+|+.+++.|.++|+++++++++++.... ..          ..+..++.+|.++++.++++=- .+++.++-+...
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~-~~----------~~g~~v~~GDat~~~~L~~agi-~~A~~vv~~~~d  474 (601)
T PRK03659        407 GFGRFGQVIGRLLMANKMRITVLERDISAVNL-MR----------KYGYKVYYGDATQLELLRAAGA-EKAEAIVITCNE  474 (601)
T ss_pred             cCchHHHHHHHHHHhCCCCEEEEECCHHHHHH-HH----------hCCCeEEEeeCCCHHHHHhcCC-ccCCEEEEEeCC
Confidence            56889999999999999999999999776321 11          2478899999999998876522 388998877765


Q ss_pred             ChhhhHHHHHhCC
Q 025702           83 EADEVEPILDALP   95 (249)
Q Consensus        83 ~~~~~~~~~~a~~   95 (249)
                      . .....++..++
T Consensus       475 ~-~~n~~i~~~~r  486 (601)
T PRK03659        475 P-EDTMKIVELCQ  486 (601)
T ss_pred             H-HHHHHHHHHHH
Confidence            3 33333444444

>PRK08223 hypothetical protein; Validated

Probab=94.83  E-value=0.3  Score=38.76  Aligned_cols=102  Identities=12%  Similarity=-0.010  Sum_probs=62.5

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEEEEe--ccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLKG--DRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~~~--d~~d~~~l~   65 (249)
                      |.|-+|+.++..|...|. ++.+++.+.-.....-...              ....+.+..+.+++...  .+ +++.+.
T Consensus        34 G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l-~~~n~~  112 (287)
T PRK08223         34 GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGI-GKENAD  112 (287)
T ss_pred             CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEeccc-CccCHH
Confidence            457799999999999995 6777777654421111100              11344455666655443  33 345667


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHH-HhCC-CCCeEEEeeccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAG  107 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~-~a~~-~~~~~i~~Ss~~  107 (249)
                      ++++  ++|+|+++.......++.++ ++|. ...++|+.+..+
T Consensus       113 ~ll~--~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~~~g  154 (287)
T PRK08223        113 AFLD--GVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAAPLG  154 (287)
T ss_pred             HHHh--CCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEeccC
Confidence            7887  99999977764322344444 4566 556888876544

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.80  E-value=0.16  Score=40.84  Aligned_cols=81  Identities=19%  Similarity=0.095  Sum_probs=53.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++.+|+...                 .++...      ...++++++  ++|+|+.+...
T Consensus       129 G~G~IG~~vA~~l~afG~~V~~~~r~~~~-----------------~~~~~~------~~~l~ell~--~aDiv~~~lp~  183 (303)
T PRK06436        129 GYGGIGRRVALLAKAFGMNIYAYTRSYVN-----------------DGISSI------YMEPEDIMK--KSDFVLISLPL  183 (303)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcc-----------------cCcccc------cCCHHHHHh--hCCEEEECCCC
Confidence            57899999999887779999999987432                 111100      124567777  88999987665


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +..    .....++.++...-||.+|...+
T Consensus       184 t~~T~~li~~~~l~~mk~ga~lIN~sRG~~  213 (303)
T PRK06436        184 TDETRGMINSKMLSLFRKGLAIINVARADV  213 (303)
T ss_pred             CchhhcCcCHHHHhcCCCCeEEEECCCccc
Confidence            322    12445666665567887776655

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=94.79  E-value=0.2  Score=38.99  Aligned_cols=83  Identities=22%  Similarity=0.170  Sum_probs=58.4

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |||+ =|+.|+..|.+.|+ |++-+-..-......+.         .+...++.+-+.|.+.+.+++++.+++.||+..-
T Consensus         7 gGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~---------~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATH   75 (249)
T PF02571_consen    7 GGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKPE---------LPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATH   75 (249)
T ss_pred             echH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhccc---------cCCceEEECCCCCHHHHHHHHHhCCCcEEEECCC
Confidence            5555 68999999999998 65554443331111110         2466788888889999999999999999998765


Q ss_pred             C-ChhhhHHHHHhCC
Q 025702           82 R-EADEVEPILDALP   95 (249)
Q Consensus        82 ~-~~~~~~~~~~a~~   95 (249)
                      . ...-.+++.++|+
T Consensus        76 PfA~~is~na~~a~~   90 (249)
T PF02571_consen   76 PFAAEISQNAIEACR   90 (249)
T ss_pred             chHHHHHHHHHHHHh
Confidence            4 3455677777776

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.69  E-value=0.13  Score=43.30  Aligned_cols=82  Identities=11%  Similarity=0.017  Sum_probs=53.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.++..|...|.+|+++++++.......           ..++++.     +   +.++++  ++|+||.+.+.
T Consensus       219 G~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-----------~~G~~v~-----~---l~eal~--~aDVVI~aTG~  277 (425)
T PRK05476        219 GYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-----------MDGFRVM-----T---MEEAAE--LGDIFVTATGN  277 (425)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-----------hcCCEec-----C---HHHHHh--CCCEEEECCCC
Confidence            5689999999999999999999998876521110           1133321     2   345555  89999998875


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeec
Q 025702           83 EADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ........++.++....++.++.
T Consensus       278 ~~vI~~~~~~~mK~GailiNvG~  300 (425)
T PRK05476        278 KDVITAEHMEAMKDGAILANIGH  300 (425)
T ss_pred             HHHHHHHHHhcCCCCCEEEEcCC
Confidence            33233346666775456666664

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.67  E-value=0.13  Score=42.70  Aligned_cols=90  Identities=9%  Similarity=0.041  Sum_probs=59.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|-+|...++.|...|.+|++++|++........        . ...  .+..+..+.+.+.+.+.  ++|+||++...
T Consensus       174 GaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~--------~-~g~--~v~~~~~~~~~l~~~l~--~aDvVI~a~~~  240 (370)
T TIGR00518       174 GGGVVGTNAAKMANGLGATVTILDINIDRLRQLDA--------E-FGG--RIHTRYSNAYEIEDAVK--RADLLIGAVLI  240 (370)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------h-cCc--eeEeccCCHHHHHHHHc--cCCEEEEcccc
Confidence            45889999999999999999999988654211000        0 011  12345566778888887  89999998743


Q ss_pred             C-----hhhhHHHHHhCCCCCeEEEeec
Q 025702           83 E-----ADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        83 ~-----~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .     .-.....++.++....+|-++.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            1     1134666777774456777774

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.65  E-value=0.43  Score=35.80  Aligned_cols=104  Identities=16%  Similarity=0.113  Sum_probs=61.4

Q ss_pred             CCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEE--EEeccCCHHHH
Q 025702            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILH--LKGDRKDYDFV   64 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~--~~~d~~d~~~l   64 (249)
                      |+ |-+|.++++.|...|. ++++++.+.-.....-...              ....+....+.+++  +...+.  +..
T Consensus        28 G~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~--~~~  104 (197)
T cd01492          28 GL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDIS--EKP  104 (197)
T ss_pred             cC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCcc--ccH
Confidence            54 4499999999999995 6888877654422111110              01223344555544  333343  223


Q ss_pred             HHhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeeccccccC
Q 025702           65 KSSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYLK  111 (249)
Q Consensus        65 ~~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~  111 (249)
                      .+.++  ++|+||.+... ......+-+.|+ ...++|+.++.+.+|.
T Consensus       105 ~~~~~--~~dvVi~~~~~-~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  149 (197)
T cd01492         105 EEFFS--QFDVVVATELS-RAELVKINELCRKLGVKFYATGVHGLFGF  149 (197)
T ss_pred             HHHHh--CCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEEecCCEEE
Confidence            45566  89999987653 333344445566 5568898888776653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=94.60  E-value=0.013  Score=41.00  Aligned_cols=67  Identities=13%  Similarity=0.078  Sum_probs=42.4

Q ss_pred             CcccchHHHHHHHHHcCCe-EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|-.|+.++.+|.+.|.+ |+++.|+.++.... .       .. ..+..+-..++   +++.+.+.  ++|+||++.+
T Consensus        19 GaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l-~-------~~-~~~~~~~~~~~---~~~~~~~~--~~DivI~aT~   84 (135)
T PF01488_consen   19 GAGGAARAVAAALAALGAKEITIVNRTPERAEAL-A-------EE-FGGVNIEAIPL---EDLEEALQ--EADIVINATP   84 (135)
T ss_dssp             SSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHH-H-------HH-HTGCSEEEEEG---GGHCHHHH--TESEEEE-SS
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHH-H-------HH-cCccccceeeH---HHHHHHHh--hCCeEEEecC
Confidence            3477999999999999975 99999987663211 0       01 11222222333   33446666  8999999976


Q ss_pred             CC
Q 025702           82 RE   83 (249)
Q Consensus        82 ~~   83 (249)
                      ..
T Consensus        85 ~~   86 (135)
T PF01488_consen   85 SG   86 (135)
T ss_dssp             TT
T ss_pred             CC
Confidence            53

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08328 hypothetical protein; Provisional

Probab=94.59  E-value=0.51  Score=36.38  Aligned_cols=104  Identities=18%  Similarity=0.205  Sum_probs=64.5

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCC------CC-c--------hhhhhccCceEEE--EeccCCHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG------ES-D--------QEFAEFSSKILHL--KGDRKDYDFV   64 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~------~~-~--------~~~~~~~~~v~~~--~~d~~d~~~l   64 (249)
                      |.|-+|+++++.|...|. ++++++.+.-........      .. .        ..+....+.+.+.  ...+ +++.+
T Consensus        34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~-~~~~~  112 (231)
T PRK08328         34 GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL-SEENI  112 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC-CHHHH
Confidence            557799999999999995 677777665442111100      00 0        1223334555443  3334 45567


Q ss_pred             HHhhhhCCCcEEEecCCCChhhhHHHHH-hCC-CCCeEEEeeccccccC
Q 025702           65 KSSLSAKGFDVVYDINGREADEVEPILD-ALP-NLEQFIYCSSAGVYLK  111 (249)
Q Consensus        65 ~~~~~~~~~d~Vi~~~~~~~~~~~~~~~-a~~-~~~~~i~~Ss~~v~~~  111 (249)
                      .++++  ++|+||.+...  ..++.++. +|+ ...++|+.++.+.+|.
T Consensus       113 ~~~l~--~~D~Vid~~d~--~~~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        113 DEVLK--GVDVIVDCLDN--FETRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             HHHHh--cCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            77887  89999998776  23444444 355 5578998888777664

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.57  E-value=0.046  Score=46.62  Aligned_cols=68  Identities=24%  Similarity=0.288  Sum_probs=46.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|+++ +|..+++.|++.|++|++.+++........    ..++.  ..++.++.+|..+     ..+.  ++|+||+++
T Consensus        11 iG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~----~~~l~--~~~~~~~~~~~~~-----~~~~--~~d~vv~~~   76 (450)
T PRK14106         11 VGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEA----LEELG--ELGIELVLGEYPE-----EFLE--GVDLVVVSP   76 (450)
T ss_pred             ECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHH--hcCCEEEeCCcch-----hHhh--cCCEEEECC
Confidence            47766 999999999999999999998753311000    01111  2356777777765     2234  799999987


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      +.
T Consensus        77 g~   78 (450)
T PRK14106         77 GV   78 (450)
T ss_pred             CC
Confidence            75

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.55  E-value=0.05  Score=46.15  Aligned_cols=31  Identities=29%  Similarity=0.544  Sum_probs=27.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      +||+|.+|..++..|.+.|++|++++|++..
T Consensus         6 IGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          6 IGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            4789999999999999999999999998654

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=94.53  E-value=0.1  Score=42.64  Aligned_cols=91  Identities=13%  Similarity=0.161  Sum_probs=57.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC----HHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d----~~~l~~~~~~~~~d~V   76 (249)
                      +|++|.+|..+++.+...|.+|+++++++.+.... .        + .-++..+ .|..+    .+.+.+... .++|+|
T Consensus       158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~-~--------~-~lGa~~v-i~~~~~~~~~~~i~~~~~-~gvd~v  225 (338)
T cd08295         158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL-K--------N-KLGFDDA-FNYKEEPDLDAALKRYFP-NGIDIY  225 (338)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H--------H-hcCCcee-EEcCCcccHHHHHHHhCC-CCcEEE
Confidence            48899999999999888999999998886552111 0        0 0122211 22222    123333332 479999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +++.+.  ......++.++...+++.++.
T Consensus       226 ~d~~g~--~~~~~~~~~l~~~G~iv~~G~  252 (338)
T cd08295         226 FDNVGG--KMLDAVLLNMNLHGRIAACGM  252 (338)
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEecc
Confidence            999884  556677777775568887764

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=94.51  E-value=0.091  Score=44.27  Aligned_cols=30  Identities=30%  Similarity=0.501  Sum_probs=27.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |.|++|..++..|.+.||+|+++++++...
T Consensus         7 GlG~~G~~lA~~La~~G~~V~~~d~~~~~v   36 (411)
T TIGR03026         7 GLGYVGLPLAALLADLGHEVTGVDIDQEKV   36 (411)
T ss_pred             CCCchhHHHHHHHHhcCCeEEEEECCHHHH
Confidence            679999999999999999999999987763

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=94.51  E-value=0.24  Score=40.02  Aligned_cols=29  Identities=31%  Similarity=0.484  Sum_probs=25.5

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGK   29 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~   29 (249)
                      +|++|.+|..++..|+..|+  +|++++|.+
T Consensus         6 iGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           6 IGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            58899999999999999985  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.50  E-value=0.058  Score=43.14  Aligned_cols=29  Identities=31%  Similarity=0.335  Sum_probs=26.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..++..|++.|++|++.+|++..
T Consensus         6 G~G~mG~~iA~~l~~~G~~V~~~dr~~~~   34 (291)
T TIGR01505         6 GLGIMGSPMSINLAKAGYQLHVTTIGPEV   34 (291)
T ss_pred             EecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999998755

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.50  E-value=0.16  Score=41.25  Aligned_cols=92  Identities=12%  Similarity=0.180  Sum_probs=57.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi   77 (249)
                      +|++|.+|..+++.+...|.+|+++++++++.... .        +  -++..+ .|..+   ...........++|+|+
T Consensus       145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~--------~--lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~  212 (325)
T TIGR02825       145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-K--------K--LGFDVA-FNYKTVKSLEETLKKASPDGYDCYF  212 (325)
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H--------H--cCCCEE-EeccccccHHHHHHHhCCCCeEEEE
Confidence            48899999999998888899999998876552111 1        1  122211 22222   22221222223799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      ++.|.  ......++.++...+++.++..
T Consensus       213 d~~G~--~~~~~~~~~l~~~G~iv~~G~~  239 (325)
T TIGR02825       213 DNVGG--EFSNTVIGQMKKFGRIAICGAI  239 (325)
T ss_pred             ECCCH--HHHHHHHHHhCcCcEEEEecch
Confidence            99884  3456677777766688877643

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=94.49  E-value=0.18  Score=39.99  Aligned_cols=93  Identities=22%  Similarity=0.244  Sum_probs=56.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCC-CC--chhhhhccCceEEEEeccCCHHHHHHhhhhC--------
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------   71 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~-~~--~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--------   71 (249)
                      |.|..|..++..|+++||+|++.+|++.+....+.. ..  ...-.+.....+++..=+.|.+.+++++...        
T Consensus         7 GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~~~~~~   86 (286)
T COG2084           7 GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGLLEGLK   86 (286)
T ss_pred             cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccchhhcCC
Confidence            578999999999999999999999998883221111 00  0000111234555555556666666666310        


Q ss_pred             CCcEEEecCCCChhhhHHHHHhCC
Q 025702           72 GFDVVYDINGREADEVEPILDALP   95 (249)
Q Consensus        72 ~~d~Vi~~~~~~~~~~~~~~~a~~   95 (249)
                      .=.++|.++......++.+.+.++
T Consensus        87 ~G~i~IDmSTisp~~a~~~a~~~~  110 (286)
T COG2084          87 PGAIVIDMSTISPETARELAAALA  110 (286)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHH
Confidence            234556666666666666666655

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.49  E-value=0.12  Score=42.22  Aligned_cols=83  Identities=19%  Similarity=0.157  Sum_probs=54.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|...|.+|++.+|.+.....  .          ..++.        ...+.++++  .+|+|+.+...
T Consensus       157 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~----------~~~~~--------~~~l~ell~--~aDiV~l~lP~  214 (333)
T PRK13243        157 GFGRIGQAVARRAKGFGMRILYYSRTRKPEAE--K----------ELGAE--------YRPLEELLR--ESDFVSLHVPL  214 (333)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCChhhH--H----------HcCCE--------ecCHHHHHh--hCCEEEEeCCC
Confidence            67999999999999999999999987543110  0          01111        124556777  88999987765


Q ss_pred             Chhhh-----HHHHHhCCCCCeEEEeecccc
Q 025702           83 EADEV-----EPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~~~-----~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +. .+     ...++.++...-+|.+|...+
T Consensus       215 t~-~T~~~i~~~~~~~mk~ga~lIN~aRg~~  244 (333)
T PRK13243        215 TK-ETYHMINEERLKLMKPTAILVNTARGKV  244 (333)
T ss_pred             Ch-HHhhccCHHHHhcCCCCeEEEECcCchh
Confidence            32 23     245555665567888887665

>PLN02494 adenosylhomocysteinase

Probab=94.43  E-value=0.17  Score=42.89  Aligned_cols=82  Identities=13%  Similarity=0.056  Sum_probs=56.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.+...|.+|+++.+++.......           ..++.++  +      +.++++  ..|+||.+.+.
T Consensus       261 GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-----------~~G~~vv--~------leEal~--~ADVVI~tTGt  319 (477)
T PLN02494        261 GYGDVGKGCAAAMKAAGARVIVTEIDPICALQAL-----------MEGYQVL--T------LEDVVS--EADIFVTTTGN  319 (477)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-----------hcCCeec--c------HHHHHh--hCCEEEECCCC
Confidence            6789999999999999999999988875421111           1233321  1      334565  78999987775


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeec
Q 025702           83 EADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ........++.++....++.++.
T Consensus       320 ~~vI~~e~L~~MK~GAiLiNvGr  342 (477)
T PLN02494        320 KDIIMVDHMRKMKNNAIVCNIGH  342 (477)
T ss_pred             ccchHHHHHhcCCCCCEEEEcCC
Confidence            44445667777886567887764

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.29  E-value=0.036  Score=42.33  Aligned_cols=31  Identities=29%  Similarity=0.343  Sum_probs=27.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      +||+|.+|+.++..|.+.|++|.+.+|+++.
T Consensus         6 IGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         6 LGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             EcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            4789999999999999999999999998755

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.29  E-value=0.6  Score=36.82  Aligned_cols=103  Identities=17%  Similarity=0.200  Sum_probs=62.8

Q ss_pred             CcccchHHHHHHHHHcC-CeEEEEecCCCcccc---CCC---C--------CCchhhhhccCceEEEEe-ccCCHHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQ---QLP---G--------ESDQEFAEFSSKILHLKG-DRKDYDFVKS   66 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~---~~~---~--------~~~~~~~~~~~~v~~~~~-d~~d~~~l~~   66 (249)
                      |.|-+|+++++.|...| -++++++.+.-....   ++.   .        .....+.+..+.+++... +..+++.+.+
T Consensus        37 G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i~~e~~~~  116 (268)
T PRK15116         37 GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFITPDNVAE  116 (268)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecccChhhHHH
Confidence            55779999999999999 578888866544211   110   0        012334444566555433 2334566666


Q ss_pred             hhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeeccc
Q 025702           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (249)
Q Consensus        67 ~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~  107 (249)
                      ++. .++|+||.+... ...-..+.++|+ ...++|.+++.+
T Consensus       117 ll~-~~~D~VIdaiD~-~~~k~~L~~~c~~~~ip~I~~gGag  156 (268)
T PRK15116        117 YMS-AGFSYVIDAIDS-VRPKAALIAYCRRNKIPLVTTGGAG  156 (268)
T ss_pred             Hhc-CCCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEECCcc
Confidence            663 279999998875 333445677777 456777665444

>PRK10537 voltage-gated potassium channel; Provisional

Probab=94.24  E-value=0.24  Score=41.35  Aligned_cols=68  Identities=16%  Similarity=0.177  Sum_probs=50.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|-+|+.++++|.++|+++++++.+...  ...           ..+..++.+|.+|++.++++-- .+++.|+-+...
T Consensus       247 G~g~lg~~v~~~L~~~g~~vvVId~d~~~--~~~-----------~~g~~vI~GD~td~e~L~~AgI-~~A~aVI~~t~d  312 (393)
T PRK10537        247 GHSPLAINTYLGLRQRGQAVTVIVPLGLE--HRL-----------PDDADLIPGDSSDSAVLKKAGA-ARARAILALRDN  312 (393)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECchhh--hhc-----------cCCCcEEEeCCCCHHHHHhcCc-ccCCEEEEcCCC
Confidence            56789999999999999999998865221  111           2567899999999988875432 288899877665


Q ss_pred             Ch
Q 025702           83 EA   84 (249)
Q Consensus        83 ~~   84 (249)
                      +.
T Consensus       313 D~  314 (393)
T PRK10537        313 DA  314 (393)
T ss_pred             hH
Confidence            43

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.20  E-value=0.033  Score=45.03  Aligned_cols=89  Identities=8%  Similarity=0.085  Sum_probs=49.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceE--EEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKIL--HLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~--~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |+|-+|+.++..|+..|++|++.++++...... .......+... ..+..  -....+.-...+++.++  ++|.|+-+
T Consensus        14 GaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~--~aDlViEa   90 (321)
T PRK07066         14 GSGVIGSGWVARALAHGLDVVAWDPAPGAEAAL-RANVANAWPALERQGLAPGASPARLRFVATIEACVA--DADFIQES   90 (321)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH-HHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhc--CCCEEEEC
Confidence            569999999999999999999999987542110 00000000000 00000  00001111123455666  99999999


Q ss_pred             CCCChhhhHHHHHhC
Q 025702           80 NGREADEVEPILDAL   94 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~   94 (249)
                      ...+...-+.++..+
T Consensus        91 vpE~l~vK~~lf~~l  105 (321)
T PRK07066         91 APEREALKLELHERI  105 (321)
T ss_pred             CcCCHHHHHHHHHHH
Confidence            887766555555443

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.18  E-value=0.2  Score=42.03  Aligned_cols=81  Identities=10%  Similarity=0.016  Sum_probs=54.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|..++..+...|.+|+++.+++.+.....           ..++..+     +.   .+.+.  ++|+||.+.|.
T Consensus       209 G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-----------~~G~~~~-----~~---~e~v~--~aDVVI~atG~  267 (413)
T cd00401         209 GYGDVGKGCAQSLRGQGARVIVTEVDPICALQAA-----------MEGYEVM-----TM---EEAVK--EGDIFVTTTGN  267 (413)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-----------hcCCEEc-----cH---HHHHc--CCCEEEECCCC
Confidence            6789999999999999999999888766522111           1233322     11   23445  78999999886


Q ss_pred             ChhhhHHHHHhCCCCCeEEEee
Q 025702           83 EADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      ........++.++....++.++
T Consensus       268 ~~~i~~~~l~~mk~GgilvnvG  289 (413)
T cd00401         268 KDIITGEHFEQMKDGAIVCNIG  289 (413)
T ss_pred             HHHHHHHHHhcCCCCcEEEEeC
Confidence            4433344577777556777776

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PLN02928 oxidoreductase family protein

Probab=94.16  E-value=0.25  Score=40.63  Aligned_cols=93  Identities=15%  Similarity=0.167  Sum_probs=55.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccC---CCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ---LPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |.|.||+.+++.|...|.+|++.+|+.......   ++.          ..+.-+........+++++++  .+|+|+.+
T Consensus       166 G~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~L~ell~--~aDiVvl~  233 (347)
T PLN02928        166 GYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPN----------GDVDDLVDEKGGHEDIYEFAG--EADIVVLC  233 (347)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhcccc----------ccccccccccCcccCHHHHHh--hCCEEEEC
Confidence            678999999999999999999998864321110   000          011100001113456788888  89999988


Q ss_pred             CCCChhhhHH-----HHHhCCCCCeEEEeecccc
Q 025702           80 NGREADEVEP-----ILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        80 ~~~~~~~~~~-----~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...+. .++.     .++.++...-||.++=..+
T Consensus       234 lPlt~-~T~~li~~~~l~~Mk~ga~lINvaRG~l  266 (347)
T PLN02928        234 CTLTK-ETAGIVNDEFLSSMKKGALLVNIARGGL  266 (347)
T ss_pred             CCCCh-HhhcccCHHHHhcCCCCeEEEECCCccc
Confidence            77542 3333     4444554456776664443

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.16  E-value=0.086  Score=42.35  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=26.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..++..|.+.|++|.+.+|++..
T Consensus         7 GlG~mG~~la~~L~~~g~~V~~~dr~~~~   35 (298)
T TIGR00872         7 GLGRMGANIVRRLAKRGHDCVGYDHDQDA   35 (298)
T ss_pred             cchHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            46899999999999999999999998765

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.06  E-value=0.67  Score=38.28  Aligned_cols=103  Identities=12%  Similarity=0.078  Sum_probs=63.4

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEEEE--eccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLK--GDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~~--~d~~d~~~l~   65 (249)
                      |.|-+|+.+++.|...|. ++++++.+.-.....-...              ....+.+..+.+++..  ..++ .+...
T Consensus        35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~-~~~~~  113 (355)
T PRK05597         35 GAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT-WSNAL  113 (355)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC-HHHHH
Confidence            457799999999999995 7777777654421111110              1123444556555443  3443 45566


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHH-HhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~-~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      ++++  ++|+||.+...  ..++.++ ++|. ...++|+.+..+.+|
T Consensus       114 ~~~~--~~DvVvd~~d~--~~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        114 DELR--DADVILDGSDN--FDTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             HHHh--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            7777  99999999875  2344444 4465 556888887655544

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.04  E-value=0.58  Score=38.97  Aligned_cols=103  Identities=16%  Similarity=0.075  Sum_probs=62.3

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCC--------------CCchhhhhccCceEEEE--eccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPG--------------ESDQEFAEFSSKILHLK--GDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~--------------~~~~~~~~~~~~v~~~~--~d~~d~~~l~   65 (249)
                      |.|-+|+.++..|...|. ++++++++.-.....-..              .....+.+..+.+++..  ..+ +.+.+.
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~-~~~~~~  220 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV-TSDNVE  220 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC-ChHHHH
Confidence            457799999999999996 788888774321111000              01123333445554433  333 345677


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHH-HHHhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEP-ILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~-~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      ++++  ++|+||++....  .++. +-++|. ...++|+.+..+.+|
T Consensus       221 ~~~~--~~D~Vv~~~d~~--~~r~~ln~~~~~~~ip~i~~~~~g~~g  263 (376)
T PRK08762        221 ALLQ--DVDVVVDGADNF--PTRYLLNDACVKLGKPLVYGAVFRFEG  263 (376)
T ss_pred             HHHh--CCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7787  899999988753  2333 444466 557888887655443

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=94.01  E-value=0.23  Score=42.30  Aligned_cols=81  Identities=11%  Similarity=-0.020  Sum_probs=53.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|+++.+++.......           ..++++.        .+.++++  .+|+|+.+.+.
T Consensus       261 G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-----------~~G~~~~--------~leell~--~ADIVI~atGt  319 (476)
T PTZ00075        261 GYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-----------MEGYQVV--------TLEDVVE--TADIFVTATGN  319 (476)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-----------hcCceec--------cHHHHHh--cCCEEEECCCc
Confidence            5688999999999999999999988865521100           1133221        2445666  89999988764


Q ss_pred             ChhhhHHHHHhCCCCCeEEEee
Q 025702           83 EADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      ........++.++....+|.++
T Consensus       320 ~~iI~~e~~~~MKpGAiLINvG  341 (476)
T PTZ00075        320 KDIITLEHMRRMKNNAIVGNIG  341 (476)
T ss_pred             ccccCHHHHhccCCCcEEEEcC
Confidence            3333356777777555677665

>PRK07574 formate dehydrogenase; Provisional

Probab=93.99  E-value=0.23  Score=41.37  Aligned_cols=85  Identities=18%  Similarity=0.083  Sum_probs=54.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|...|.+|++.+|....... ..          ..++.       -...++++++  .+|+|+.+...
T Consensus       199 G~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~-~~----------~~g~~-------~~~~l~ell~--~aDvV~l~lPl  258 (385)
T PRK07574        199 GAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEV-EQ----------ELGLT-------YHVSFDSLVS--VCDVVTIHCPL  258 (385)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEECCCCCchhh-Hh----------hcCce-------ecCCHHHHhh--cCCEEEEcCCC
Confidence            56889999999999999999999987633110 00          01121       1234667777  89999987775


Q ss_pred             ChhhhHH-----HHHhCCCCCeEEEeecccc
Q 025702           83 EADEVEP-----ILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~~~~~-----~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +. .++.     ++..++...-||.+|-..+
T Consensus       259 t~-~T~~li~~~~l~~mk~ga~lIN~aRG~i  288 (385)
T PRK07574        259 HP-ETEHLFDADVLSRMKRGSYLVNTARGKI  288 (385)
T ss_pred             CH-HHHHHhCHHHHhcCCCCcEEEECCCCch
Confidence            33 3444     4445554456777775544

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=93.95  E-value=0.36  Score=39.77  Aligned_cols=61  Identities=16%  Similarity=0.094  Sum_probs=45.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |+|.+|..++.++.+.|++|++++.++......+.           .  +.+..++.|.+.+.++.+  .+|+|..
T Consensus         6 G~gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a-----------d--~~~~~~~~d~~~i~~~a~--~~dvit~   66 (352)
T TIGR01161         6 GGGQLGRMLALAARPLGIKVHVLDPDANSPAVQVA-----------D--HVVLAPFFDPAAIRELAE--SCDVITF   66 (352)
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC-----------c--eeEeCCCCCHHHHHHHHh--hCCEEEe
Confidence            34899999999999999999999887655322211           1  234678889999999887  7887643

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=93.95  E-value=0.17  Score=40.73  Aligned_cols=76  Identities=16%  Similarity=0.112  Sum_probs=48.5

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      +||||++|..|++.|.++. .++..+..+...                         ++.+.   ...++  ++|+||.+
T Consensus         8 vGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~-------------------------~~~~~---~~~~~--~~DvvFla   57 (313)
T PRK11863          8 DGEAGTTGLQIRERLAGRSDIELLSIPEAKRK-------------------------DAAAR---RELLN--AADVAILC   57 (313)
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC-------------------------cccCc---hhhhc--CCCEEEEC
Confidence            5999999999999999986 366666544322                         11111   12334  78999987


Q ss_pred             CCCChhhhHHHHHhCC-CCCeEEEeecccc
Q 025702           80 NGREADEVEPILDALP-NLEQFIYCSSAGV  108 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v  108 (249)
                      .+.  .....+...+. ...++|=.|+..-
T Consensus        58 lp~--~~s~~~~~~~~~~g~~VIDlSadfR   85 (313)
T PRK11863         58 LPD--DAAREAVALIDNPATRVIDASTAHR   85 (313)
T ss_pred             CCH--HHHHHHHHHHHhCCCEEEECChhhh
Confidence            764  34455555543 3347888887654

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=93.92  E-value=0.28  Score=40.83  Aligned_cols=29  Identities=24%  Similarity=0.558  Sum_probs=26.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~   29 (249)
                      +||.|.+|..+++.|.+.|++|++.+|+.
T Consensus       104 iGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199        104 VGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             EcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            47899999999999999999999999864

>PRK06487 glycerate dehydrogenase; Provisional

Probab=93.79  E-value=0.3  Score=39.64  Aligned_cols=78  Identities=17%  Similarity=0.086  Sum_probs=49.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|..-|.+|++.+|....                 ...        +...++++++  ..|+|+.+...
T Consensus       155 G~G~IG~~vA~~l~~fgm~V~~~~~~~~~-----------------~~~--------~~~~l~ell~--~sDiv~l~lPl  207 (317)
T PRK06487        155 GHGELGGAVARLAEAFGMRVLIGQLPGRP-----------------ARP--------DRLPLDELLP--QVDALTLHCPL  207 (317)
T ss_pred             CCCHHHHHHHHHHhhCCCEEEEECCCCCc-----------------ccc--------cccCHHHHHH--hCCEEEECCCC
Confidence            56899999999999889999998875321                 011        1124677777  88888877665


Q ss_pred             ChhhhHH-----HHHhCCCCCeEEEeecccc
Q 025702           83 EADEVEP-----ILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~~~~~-----~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +. .++.     .++.++....||.+|=..+
T Consensus       208 t~-~T~~li~~~~~~~mk~ga~lIN~aRG~v  237 (317)
T PRK06487        208 TE-HTRHLIGARELALMKPGALLINTARGGL  237 (317)
T ss_pred             Ch-HHhcCcCHHHHhcCCCCeEEEECCCccc
Confidence            32 2333     3444554446666664333

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.78  E-value=0.69  Score=38.77  Aligned_cols=103  Identities=11%  Similarity=0.014  Sum_probs=63.3

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEE--EEeccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILH--LKGDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~--~~~d~~d~~~l~   65 (249)
                      |.|-+|..+++.|...|. ++++++.+.-.....-...              ....+.+..+.+++  +...++ .+...
T Consensus        49 G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~-~~~~~  127 (392)
T PRK07878         49 GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD-PSNAV  127 (392)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC-hhHHH
Confidence            457799999999999995 6777776543321111000              01233444555554  334443 45567


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHH-HhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~-~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      ++++  ++|+|+.+...  ..++.++ ++|. ...+||+.+..+.+|
T Consensus       128 ~~~~--~~D~Vvd~~d~--~~~r~~ln~~~~~~~~p~v~~~~~g~~G  170 (392)
T PRK07878        128 ELFS--QYDLILDGTDN--FATRYLVNDAAVLAGKPYVWGSIYRFEG  170 (392)
T ss_pred             HHHh--cCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            7787  99999988764  2344444 4455 456888888777665

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=93.76  E-value=0.2  Score=41.89  Aligned_cols=66  Identities=17%  Similarity=0.048  Sum_probs=49.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|.+|+.++.++.+.|++|++++.++........           .  ..+..|..|.+.+.+++++.++|.|+....
T Consensus        19 G~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a-----------d--~~~~~~~~d~~~l~~~~~~~~id~vi~~~e   84 (395)
T PRK09288         19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-----------H--RSHVIDMLDGDALRAVIEREKPDYIVPEIE   84 (395)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh-----------h--heEECCCCCHHHHHHHHHHhCCCEEEEeeC
Confidence            35789999999999999999999988754221111           1  245678889999999888889999996544

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.74  E-value=0.26  Score=33.89  Aligned_cols=87  Identities=20%  Similarity=0.260  Sum_probs=57.1

Q ss_pred             chHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEEecCCCC
Q 025702            7 IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDINGRE   83 (249)
Q Consensus         7 iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi~~~~~~   83 (249)
                      +|...++.+...|.+|+++++++.+... +        .+  -+...+ .|..+   .+.+.++....++|+||.+.+. 
T Consensus         2 vG~~a~q~ak~~G~~vi~~~~~~~k~~~-~--------~~--~Ga~~~-~~~~~~~~~~~i~~~~~~~~~d~vid~~g~-   68 (130)
T PF00107_consen    2 VGLMAIQLAKAMGAKVIATDRSEEKLEL-A--------KE--LGADHV-IDYSDDDFVEQIRELTGGRGVDVVIDCVGS-   68 (130)
T ss_dssp             HHHHHHHHHHHTTSEEEEEESSHHHHHH-H--------HH--TTESEE-EETTTSSHHHHHHHHTTTSSEEEEEESSSS-
T ss_pred             hHHHHHHHHHHcCCEEEEEECCHHHHHH-H--------Hh--hccccc-ccccccccccccccccccccceEEEEecCc-
Confidence            6888888888889999999998765211 1        11  123222 23333   4555666554579999999995 


Q ss_pred             hhhhHHHHHhCCCCCeEEEeecc
Q 025702           84 ADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        84 ~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      .......++.++...+++.++..
T Consensus        69 ~~~~~~~~~~l~~~G~~v~vg~~   91 (130)
T PF00107_consen   69 GDTLQEAIKLLRPGGRIVVVGVY   91 (130)
T ss_dssp             HHHHHHHHHHEEEEEEEEEESST
T ss_pred             HHHHHHHHHHhccCCEEEEEEcc
Confidence            45566677777755678877743

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=93.70  E-value=0.31  Score=39.57  Aligned_cols=69  Identities=16%  Similarity=0.082  Sum_probs=44.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|..-|.+|++.++..........                   .....++++++++  ..|+|+.....
T Consensus       149 G~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~-------------------~~~~~~~Ld~lL~--~sDiv~lh~Pl  207 (324)
T COG0111         149 GLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVD-------------------GVVGVDSLDELLA--EADILTLHLPL  207 (324)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCCchhhhccc-------------------cceecccHHHHHh--hCCEEEEcCCC
Confidence            57899999999999999999999994443111000                   1122345667776  77877766554


Q ss_pred             ChhhhHHHHHh
Q 025702           83 EADEVEPILDA   93 (249)
Q Consensus        83 ~~~~~~~~~~a   93 (249)
                      . ..++.++.+
T Consensus       208 T-~eT~g~i~~  217 (324)
T COG0111         208 T-PETRGLINA  217 (324)
T ss_pred             C-cchhcccCH
Confidence            3 224444433

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.70  E-value=0.029  Score=44.77  Aligned_cols=97  Identities=10%  Similarity=0.132  Sum_probs=56.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccC-----------CCCCC--chhhhhccCceEEEEeccCCHHHHHHhhh
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ-----------LPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----------~~~~~--~~~~~~~~~~v~~~~~d~~d~~~l~~~~~   69 (249)
                      |+|.+|..++..|+..|++|++++++++.....           .....  +.........+.+ .      ..+ +.++
T Consensus        12 GaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~-~------~~~-~~~~   83 (286)
T PRK07819         12 GAGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRF-T------TDL-GDFA   83 (286)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEe-e------CCH-HHhC
Confidence            459999999999999999999999998773220           00000  0000000011111 1      122 2244


Q ss_pred             hCCCcEEEecCCCChhhhHHHHHhCC-C--CCeEEEeeccccc
Q 025702           70 AKGFDVVYDINGREADEVEPILDALP-N--LEQFIYCSSAGVY  109 (249)
Q Consensus        70 ~~~~d~Vi~~~~~~~~~~~~~~~a~~-~--~~~~i~~Ss~~v~  109 (249)
                        ++|+||-+...+...-+.++..+. -  ...-|++|+++.+
T Consensus        84 --~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS~~  124 (286)
T PRK07819         84 --DRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTSSI  124 (286)
T ss_pred             --CCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence              899999998877766566555544 2  2345666655543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.68  E-value=0.11  Score=46.27  Aligned_cols=68  Identities=19%  Similarity=0.270  Sum_probs=53.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|-+|+.+++.|.++|+++++++.+++..... .          ..+..++.+|.+|++.+++.=- .+++.|+-+...
T Consensus       407 G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~----------~~g~~v~~GDat~~~~L~~agi-~~A~~vvv~~~d  474 (621)
T PRK03562        407 GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-R----------KFGMKVFYGDATRMDLLESAGA-AKAEVLINAIDD  474 (621)
T ss_pred             ecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-H----------hcCCeEEEEeCCCHHHHHhcCC-CcCCEEEEEeCC
Confidence            568899999999999999999999998763221 1          2478899999999998875322 278888877754

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=93.67  E-value=0.19  Score=41.77  Aligned_cols=82  Identities=20%  Similarity=0.174  Sum_probs=49.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.++......               ...        ....++++++  ++|+|+.....
T Consensus       123 G~G~IG~~va~~l~a~G~~V~~~Dp~~~~~~---------------~~~--------~~~~l~ell~--~aDiV~lh~Pl  177 (381)
T PRK00257        123 GAGHVGGRLVRVLRGLGWKVLVCDPPRQEAE---------------GDG--------DFVSLERILE--ECDVISLHTPL  177 (381)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCcccccc---------------cCc--------cccCHHHHHh--hCCEEEEeCcC
Confidence            6799999999999999999999976432100               011        1123556666  77877765554


Q ss_pred             Chh---hhHH-----HHHhCCCCCeEEEeeccccc
Q 025702           83 EAD---EVEP-----ILDALPNLEQFIYCSSAGVY  109 (249)
Q Consensus        83 ~~~---~~~~-----~~~a~~~~~~~i~~Ss~~v~  109 (249)
                      ...   .+..     .+..++...-+|.+|-..+.
T Consensus       178 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vV  212 (381)
T PRK00257        178 TKEGEHPTRHLLDEAFLASLRPGAWLINASRGAVV  212 (381)
T ss_pred             CCCccccccccCCHHHHhcCCCCeEEEECCCCccc
Confidence            332   2333     34445544566666655543

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.66  E-value=0.33  Score=39.29  Aligned_cols=90  Identities=18%  Similarity=0.188  Sum_probs=57.1

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEEe
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||+|-+|...++.+...|.+|+++++++.+....         .+  -++..+ .|..+   .+.+.+.....++|+||+
T Consensus       151 ~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~---------~~--~g~~~~-i~~~~~~~~~~v~~~~~~~~~d~vid  218 (324)
T cd08291         151 AAASALGRMLVRLCKADGIKVINIVRRKEQVDLL---------KK--IGAEYV-LNSSDPDFLEDLKELIAKLNATIFFD  218 (324)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--cCCcEE-EECCCccHHHHHHHHhCCCCCcEEEE
Confidence            7899999999988888899999988876552111         01  122211 12222   234444444347999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +.+.  ......++.++...+++.++.
T Consensus       219 ~~g~--~~~~~~~~~l~~~G~~v~~g~  243 (324)
T cd08291         219 AVGG--GLTGQILLAMPYGSTLYVYGY  243 (324)
T ss_pred             CCCc--HHHHHHHHhhCCCCEEEEEEe
Confidence            9884  334556667775568887764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR00936 ahcY adenosylhomocysteinase

Probab=93.66  E-value=0.27  Score=41.11  Aligned_cols=82  Identities=7%  Similarity=-0.022  Sum_probs=53.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.+...|.+|+++.+++.......           ..++.+.  ++      .++++  +.|+||.+.+.
T Consensus       202 G~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-----------~~G~~v~--~l------eeal~--~aDVVItaTG~  260 (406)
T TIGR00936       202 GYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-----------MDGFRVM--TM------EEAAK--IGDIFITATGN  260 (406)
T ss_pred             CCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-----------hcCCEeC--CH------HHHHh--cCCEEEECCCC
Confidence            6799999999999999999999998875521111           1233322  21      23455  88999988775


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeec
Q 025702           83 EADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ........+..++....+++++.
T Consensus       261 ~~vI~~~~~~~mK~GailiN~G~  283 (406)
T TIGR00936       261 KDVIRGEHFENMKDGAIVANIGH  283 (406)
T ss_pred             HHHHHHHHHhcCCCCcEEEEECC
Confidence            33333346666775557777764

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.65  E-value=0.032  Score=44.54  Aligned_cols=29  Identities=17%  Similarity=0.313  Sum_probs=26.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|.+|..++..|.+.|++|+++++++..
T Consensus        10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293         10 GAGVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             CCCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            46999999999999999999999998754

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=93.64  E-value=0.15  Score=41.38  Aligned_cols=29  Identities=17%  Similarity=0.090  Sum_probs=24.7

Q ss_pred             CCCcccchHHHHHHHHHcCC-------eEEEEecCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGK   29 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-------~v~~~~r~~   29 (249)
                      +|++|.+|++++..|+..+.       ++..++..+
T Consensus         9 IGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         9 TGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             ECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            58889999999999998873       788888865

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=93.64  E-value=0.15  Score=41.51  Aligned_cols=89  Identities=15%  Similarity=0.117  Sum_probs=49.0

Q ss_pred             CCCcccchHHHHHHHHHcC---CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +||||++|+.+++.|.++.   .++..+....+. -+.+.-      .  ...+.+-  ++   +.  ..+.  ++|+||
T Consensus        10 vGATG~vG~ellrlL~~~~hP~~~l~~laS~~sa-G~~~~~------~--~~~~~v~--~~---~~--~~~~--~~Dvvf   71 (336)
T PRK08040         10 LGATGAVGEALLELLAERQFPVGELYALASEESA-GETLRF------G--GKSVTVQ--DA---AE--FDWS--QAQLAF   71 (336)
T ss_pred             EccCCHHHHHHHHHHhcCCCCceEEEEEEccCcC-CceEEE------C--CcceEEE--eC---ch--hhcc--CCCEEE
Confidence            5999999999999999954   366666544222 111100      0  0111111  22   11  1124  789999


Q ss_pred             ecCCCChhhhHHHHHhC-CCCCeEEEeeccccc
Q 025702           78 DINGREADEVEPILDAL-PNLEQFIYCSSAGVY  109 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~-~~~~~~i~~Ss~~v~  109 (249)
                      .+.+.  .....+...+ ....++|=.|+..-+
T Consensus        72 ~a~p~--~~s~~~~~~~~~~g~~VIDlS~~fRl  102 (336)
T PRK08040         72 FVAGR--EASAAYAEEATNAGCLVIDSSGLFAL  102 (336)
T ss_pred             ECCCH--HHHHHHHHHHHHCCCEEEECChHhcC
Confidence            88875  3444555544 333467777766644

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=93.63  E-value=0.2  Score=40.57  Aligned_cols=89  Identities=20%  Similarity=0.234  Sum_probs=55.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh-hCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~-~~~~d~Vi~~   79 (249)
                      +|++|.+|..+++.+...|.+|+++++++..... +.        .  -+...+ .+..+   +.+.+. ..++|.|+++
T Consensus       169 ~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~~~~~~-~~~~~---~~~~~~~~~~~d~v~~~  233 (332)
T cd08259         169 TGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI-LK--------E--LGADYV-IDGSK---FSEDVKKLGGADVVIEL  233 (332)
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH-HH--------H--cCCcEE-EecHH---HHHHHHhccCCCEEEEC
Confidence            4899999999999999999999999887644211 10        0  011111 12221   222221 1279999999


Q ss_pred             CCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      ++..  .....++.+....++|.++..
T Consensus       234 ~g~~--~~~~~~~~~~~~g~~v~~g~~  258 (332)
T cd08259         234 VGSP--TIEESLRSLNKGGRLVLIGNV  258 (332)
T ss_pred             CChH--HHHHHHHHhhcCCEEEEEcCC
Confidence            8753  355566666655678877753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=93.62  E-value=0.086  Score=43.06  Aligned_cols=68  Identities=16%  Similarity=0.211  Sum_probs=55.0

Q ss_pred             CcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH-HHHHhhhhCCCcEEEecC
Q 025702            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD-FVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~-~l~~~~~~~~~d~Vi~~~   80 (249)
                      |+||+.+-++..|.+++ .+|++.+|...+..+...          +.+++.+..|+.+++ .++...+  ..|.|+.+.
T Consensus         9 gsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~----------~~~~~av~ldv~~~~~~L~~~v~--~~D~viSLl   76 (445)
T KOG0172|consen    9 GSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVK----------GINIKAVSLDVADEELALRKEVK--PLDLVISLL   76 (445)
T ss_pred             cCccccchHHHHHhhcCCceEEEehhhHHHHHHHhc----------CCCccceEEEccchHHHHHhhhc--ccceeeeec
Confidence            68999999999999875 789999998776332221          345889999999988 8999888  999999886


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      ..
T Consensus        77 P~   78 (445)
T KOG0172|consen   77 PY   78 (445)
T ss_pred             cc
Confidence            64

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=93.61  E-value=0.16  Score=41.01  Aligned_cols=66  Identities=18%  Similarity=0.266  Sum_probs=41.8

Q ss_pred             CcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhc----cCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            3 GTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF----SSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      |+|.+|+.++..|+..|  +++.++++++...... .    .++.+.    ...+.+..   .+.+.    ++  ++|+|
T Consensus         7 GaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~-a----~dL~~~~~~~~~~~~i~~---~~~~~----l~--~aDIV   72 (306)
T cd05291           7 GAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGE-A----LDLEDALAFLPSPVKIKA---GDYSD----CK--DADIV   72 (306)
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHh-H----hhHHHHhhccCCCeEEEc---CCHHH----hC--CCCEE
Confidence            35999999999999998  6899999987663211 1    111110    12222222   22222    44  99999


Q ss_pred             EecCCC
Q 025702           77 YDINGR   82 (249)
Q Consensus        77 i~~~~~   82 (249)
                      |.+++.
T Consensus        73 Iitag~   78 (306)
T cd05291          73 VITAGA   78 (306)
T ss_pred             EEccCC
Confidence            999886

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=93.61  E-value=0.089  Score=45.45  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=26.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|.+|..++..|+..|++|++.++++..
T Consensus        11 G~G~MG~~iA~~la~~G~~V~v~D~~~~~   39 (495)
T PRK07531         11 GGGVIGGGWAARFLLAGIDVAVFDPHPEA   39 (495)
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            67999999999999999999999998766

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=93.60  E-value=0.67  Score=38.48  Aligned_cols=103  Identities=13%  Similarity=0.104  Sum_probs=62.9

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEEE--EeccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHL--KGDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~--~~d~~d~~~l~   65 (249)
                      |.|-+|..++..|...|. ++++++.+.-.........              ....+....+.+++.  ...+ +.+.+.
T Consensus        48 G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-~~~~~~  126 (370)
T PRK05600         48 GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERL-TAENAV  126 (370)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeec-CHHHHH
Confidence            457799999999999995 8888887754422111110              012333445554443  3344 355677


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHHh-CC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILDA-LP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~a-~~-~~~~~i~~Ss~~v~~  110 (249)
                      ++++  ++|+||.+...  ..++.++.. |. ...++|+.+..+-+|
T Consensus       127 ~~~~--~~DlVid~~Dn--~~~r~~in~~~~~~~iP~v~~~~~g~~G  169 (370)
T PRK05600        127 ELLN--GVDLVLDGSDS--FATKFLVADAAEITGTPLVWGTVLRFHG  169 (370)
T ss_pred             HHHh--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence            7887  99999998775  334444444 55 456788777544443

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=93.58  E-value=0.04  Score=38.90  Aligned_cols=31  Identities=23%  Similarity=0.452  Sum_probs=26.8

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~   31 (249)
                      +|++|.+|++++..|...+  .+++.+++++..
T Consensus         6 iGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~   38 (141)
T PF00056_consen    6 IGAAGNVGSTLALLLAQQGLADEIVLIDINEDK   38 (141)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHH
T ss_pred             ECCCChHHHHHHHHHHhCCCCCceEEeccCccc
Confidence            5889999999999999987  589999988654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=93.56  E-value=0.33  Score=39.27  Aligned_cols=91  Identities=18%  Similarity=0.269  Sum_probs=58.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|..+++.+...|.+|+++++++++... +        .+  -++..+ .|..+.   +.+.+... .++|+|+
T Consensus       150 ~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~-l--------~~--~Ga~~v-i~~~~~~~~~~v~~~~~-~gvd~vl  216 (329)
T cd08294         150 NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAW-L--------KE--LGFDAV-FNYKTVSLEEALKEAAP-DGIDCYF  216 (329)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HH--cCCCEE-EeCCCccHHHHHHHHCC-CCcEEEE
Confidence            4889999999999999999999999887655211 1        11  122221 233332   23333332 4799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      ++.+.  ......++.++...+++.+++.
T Consensus       217 d~~g~--~~~~~~~~~l~~~G~iv~~g~~  243 (329)
T cd08294         217 DNVGG--EFSSTVLSHMNDFGRVAVCGSI  243 (329)
T ss_pred             ECCCH--HHHHHHHHhhccCCEEEEEcch
Confidence            99884  4556667777755688877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.56  E-value=0.048  Score=43.54  Aligned_cols=30  Identities=20%  Similarity=0.325  Sum_probs=26.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |.|.+|..++..|.+.|++|+++++++...
T Consensus         8 G~G~mG~~iA~~la~~G~~V~~~d~~~~~~   37 (288)
T PRK09260          8 GAGVMGRGIAYVFAVSGFQTTLVDIKQEQL   37 (288)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            459999999999999999999999987663

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=93.55  E-value=0.041  Score=39.35  Aligned_cols=67  Identities=13%  Similarity=0.112  Sum_probs=41.3

Q ss_pred             CCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |+ |.+|+.+++.|.+.| ++|++++|++........        ..  +...+..+..+.+   +.++  ++|+||++.
T Consensus        26 G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~--------~~--~~~~~~~~~~~~~---~~~~--~~Dvvi~~~   89 (155)
T cd01065          26 GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAE--------RF--GELGIAIAYLDLE---ELLA--EADLIINTT   89 (155)
T ss_pred             CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH--------HH--hhcccceeecchh---hccc--cCCEEEeCc
Confidence            54 899999999999996 789999988655211100        00  1110122333333   3355  899999997


Q ss_pred             CCCh
Q 025702           81 GREA   84 (249)
Q Consensus        81 ~~~~   84 (249)
                      +...
T Consensus        90 ~~~~   93 (155)
T cd01065          90 PVGM   93 (155)
T ss_pred             CCCC
Confidence            7643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=93.54  E-value=0.45  Score=34.12  Aligned_cols=67  Identities=19%  Similarity=0.236  Sum_probs=46.5

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-------HHHHHHhhhhCCCc
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-------YDFVKSSLSAKGFD   74 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-------~~~l~~~~~~~~~d   74 (249)
                      ||-|-+|+++++.|..++|-|.-++-..+...+               .-.++..|-.-       .+++...++++++|
T Consensus        10 GGkGALGSacv~~FkannywV~siDl~eNe~Ad---------------~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen   10 GGKGALGSACVEFFKANNYWVLSIDLSENEQAD---------------SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             cCcchHhHHHHHHHHhcCeEEEEEeeccccccc---------------ceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            888999999999999999999998887666321               11222333221       12344555667999


Q ss_pred             EEEecCCCC
Q 025702           75 VVYDINGRE   83 (249)
Q Consensus        75 ~Vi~~~~~~   83 (249)
                      .||+.+|-+
T Consensus        75 av~CVAGGW   83 (236)
T KOG4022|consen   75 AVFCVAGGW   83 (236)
T ss_pred             eEEEeeccc
Confidence            999998754

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=93.47  E-value=0.26  Score=39.87  Aligned_cols=93  Identities=19%  Similarity=0.203  Sum_probs=59.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHH---HHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~---l~~~~~~~~~d~Vi   77 (249)
                      +|++|-+|..++..+...|.+|++++++...... +        ..  .+... ..|..+.+.   +.......++|.++
T Consensus       173 ~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~--------~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         173 HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLER-A--------KE--LGADY-VIDYRKEDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H--------HH--cCCCe-EEecCChHHHHHHHHHhCCCCCcEEE
Confidence            4888899999999999999999999887654211 1        00  01111 124444333   33333334799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      ++++.  ......++.++...+++.+++..
T Consensus       241 ~~~g~--~~~~~~~~~l~~~G~~v~~~~~~  268 (342)
T cd08266         241 EHVGA--ATWEKSLKSLARGGRLVTCGATT  268 (342)
T ss_pred             ECCcH--HHHHHHHHHhhcCCEEEEEecCC
Confidence            99884  34556666666456888887643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=93.46  E-value=0.35  Score=40.15  Aligned_cols=26  Identities=23%  Similarity=0.164  Sum_probs=23.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~   28 (249)
                      |.|.||+.+++.|..-|.+|++.++.
T Consensus       123 G~G~IG~~vA~~l~a~G~~V~~~dp~  148 (378)
T PRK15438        123 GVGNVGRRLQARLEALGIKTLLCDPP  148 (378)
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCc
Confidence            67999999999999999999999754

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=93.43  E-value=0.18  Score=40.68  Aligned_cols=19  Identities=32%  Similarity=0.457  Sum_probs=17.3

Q ss_pred             CCCcccchHHHHHHHHHcC
Q 025702            1 MGGTRFIGVFLSRLLVKEG   19 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g   19 (249)
                      +|+||.+|+.+++.|.+..
T Consensus         7 vGATG~VG~~~~~~L~e~~   25 (334)
T COG0136           7 LGATGAVGQVLLELLEERH   25 (334)
T ss_pred             EeccchHHHHHHHHHHhcC
Confidence            4999999999999999964

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=93.40  E-value=0.25  Score=39.46  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..+++.|++.|++|++.+|++..
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~   31 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDA   31 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            67999999999999999999999998765

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.33  E-value=0.35  Score=39.05  Aligned_cols=28  Identities=29%  Similarity=0.482  Sum_probs=25.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~   30 (249)
                      |+|.+|++++..|.+.||+|++.+|++.
T Consensus        11 G~G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619         11 GAGAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            6799999999999999999999999764

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.31  E-value=0.36  Score=39.36  Aligned_cols=82  Identities=15%  Similarity=0.137  Sum_probs=51.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++....               ..+.     .  .+.+.++++  ++|+|+.+...
T Consensus       153 G~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~---------------~~~~-----~--~~~l~ell~--~aDiVil~lP~  208 (330)
T PRK12480        153 GTGRIGAATAKIYAGFGATITAYDAYPNKDL---------------DFLT-----Y--KDSVKEAIK--DADIISLHVPA  208 (330)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEeCChhHhh---------------hhhh-----c--cCCHHHHHh--cCCEEEEeCCC
Confidence            6799999999999999999999998864311               0000     1  124566777  88988877665


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    ....++..++...-||.+|-..+
T Consensus       209 t~~t~~li~~~~l~~mk~gavlIN~aRG~~  238 (330)
T PRK12480        209 NKESYHLFDKAMFDHVKKGAILVNAARGAV  238 (330)
T ss_pred             cHHHHHHHhHHHHhcCCCCcEEEEcCCccc
Confidence            332    12233444553345666654443

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=93.29  E-value=0.61  Score=38.55  Aligned_cols=88  Identities=15%  Similarity=0.146  Sum_probs=56.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|.+|..+++.+...|.+|++++.+..+......          .-++..+ .|..+.+.+.+...  ++|+||.+.+.
T Consensus       191 G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~----------~~Ga~~v-i~~~~~~~~~~~~~--~~D~vid~~g~  257 (360)
T PLN02586        191 GLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN----------RLGADSF-LVSTDPEKMKAAIG--TMDYIIDTVSA  257 (360)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH----------hCCCcEE-EcCCCHHHHHhhcC--CCCEEEECCCC
Confidence            46899999999988899999888776544211111          0122222 23334445555544  68999999884


Q ss_pred             ChhhhHHHHHhCCCCCeEEEee
Q 025702           83 EADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                       .......++.++...+++.++
T Consensus       258 -~~~~~~~~~~l~~~G~iv~vG  278 (360)
T PLN02586        258 -VHALGPLLGLLKVNGKLITLG  278 (360)
T ss_pred             -HHHHHHHHHHhcCCcEEEEeC
Confidence             234555777777556888776

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=93.26  E-value=0.52  Score=38.68  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=24.2

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCC
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~   29 (249)
                      +|++|++|++|++.|.+++ .++..+.++.
T Consensus         6 vGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         6 LGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            5999999999999998876 6888885543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=93.21  E-value=0.39  Score=41.04  Aligned_cols=64  Identities=11%  Similarity=0.028  Sum_probs=44.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh-hCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~-~~~~d~Vi~~~~   81 (249)
                      .||..|.+|++++...|++|+.++-...-   ..           ..+++++.+  ...+++.+.+. ....|++|++|+
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~~---~~-----------p~~v~~i~V--~ta~eM~~av~~~~~~Di~I~aAA  343 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVDL---AD-----------PQGVKVIHV--ESARQMLAAVEAALPADIAIFAAA  343 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcCC---CC-----------CCCceEEEe--cCHHHHHHHHHhhCCCCEEEEecc
Confidence            58999999999999999999999854321   01           356776654  34444444443 235799999988


Q ss_pred             C
Q 025702           82 R   82 (249)
Q Consensus        82 ~   82 (249)
                      .
T Consensus       344 V  344 (475)
T PRK13982        344 V  344 (475)
T ss_pred             c
Confidence            4

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.19  E-value=0.34  Score=39.98  Aligned_cols=89  Identities=20%  Similarity=0.246  Sum_probs=49.4

Q ss_pred             CCCcccchHHHHHHHHHc-CCe---EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||||++|+.+++.|+++ .++   +..+.......  ..+.         ..+-.....+..+.+.    ++  ++|+|
T Consensus         7 VGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~--~~~~---------f~g~~~~v~~~~~~~~----~~--~~Div   69 (369)
T PRK06598          7 VGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGG--AAPS---------FGGKEGTLQDAFDIDA----LK--KLDII   69 (369)
T ss_pred             EeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCC--cccc---------cCCCcceEEecCChhH----hc--CCCEE
Confidence            499999999999966665 565   55554432221  1111         0111222334444433    34  89999


Q ss_pred             EecCCCChhhhHHHHHhC-C-CCC-eEEEeecccc
Q 025702           77 YDINGREADEVEPILDAL-P-NLE-QFIYCSSAGV  108 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~-~-~~~-~~i~~Ss~~v  108 (249)
                      |.+++.  .....+...+ . +.+ .+|=.||..-
T Consensus        70 f~a~~~--~~s~~~~~~~~~aG~~~~VID~Ss~fR  102 (369)
T PRK06598         70 ITCQGG--DYTNEVYPKLRAAGWQGYWIDAASTLR  102 (369)
T ss_pred             EECCCH--HHHHHHHHHHHhCCCCeEEEECChHHh
Confidence            998875  3455555544 3 432 4666665543

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=93.17  E-value=0.41  Score=38.59  Aligned_cols=91  Identities=18%  Similarity=0.164  Sum_probs=58.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi   77 (249)
                      .|++|.+|..+++.+...|.+|++++++..+....         ..  .++..+ .+..+   .+.+.+.....++|+|+
T Consensus       146 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~---------~~--~g~~~~-~~~~~~~~~~~i~~~~~~~~~d~v~  213 (324)
T cd08292         146 NAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL---------RA--LGIGPV-VSTEQPGWQDKVREAAGGAPISVAL  213 (324)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH---------Hh--cCCCEE-EcCCCchHHHHHHHHhCCCCCcEEE
Confidence            48899999999999999999999998876552111         11  122221 12232   23344444445799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++.+..  .....++.++...+||.++.
T Consensus       214 d~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (324)
T cd08292         214 DSVGGK--LAGELLSLLGEGGTLVSFGS  239 (324)
T ss_pred             ECCCCh--hHHHHHHhhcCCcEEEEEec
Confidence            998853  44566677775668887764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK07877 hypothetical protein; Provisional

Probab=93.15  E-value=0.59  Score=42.24  Aligned_cols=96  Identities=20%  Similarity=0.213  Sum_probs=62.2

Q ss_pred             CCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCC--------------CchhhhhccCceEEEE--eccCCHHH
Q 025702            2 GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLK--GDRKDYDF   63 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~~--~d~~d~~~   63 (249)
                      |. | +|++++..|...|.  ++++++.+.-... .+...              .+..+....+.+++..  ..+ +.+.
T Consensus       114 G~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~s-NLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i-~~~n  189 (722)
T PRK07877        114 GL-S-VGHAIAHTLAAEGLCGELRLADFDTLELS-NLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGL-TEDN  189 (722)
T ss_pred             Ee-c-HHHHHHHHHHHccCCCeEEEEcCCEEccc-ccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccC-CHHH
Confidence            55 8 99999999999984  7888887654421 11111              1123444455555444  444 4778


Q ss_pred             HHHhhhhCCCcEEEecCCCChhhhHHHHHh-CC-CCCeEEEeec
Q 025702           64 VKSSLSAKGFDVVYDINGREADEVEPILDA-LP-NLEQFIYCSS  105 (249)
Q Consensus        64 l~~~~~~~~~d~Vi~~~~~~~~~~~~~~~a-~~-~~~~~i~~Ss  105 (249)
                      +.++++  ++|+|+.+...  -.++.++.. |. ....+|+.++
T Consensus       190 ~~~~l~--~~DlVvD~~D~--~~~R~~ln~~a~~~~iP~i~~~~  229 (722)
T PRK07877        190 VDAFLD--GLDVVVEECDS--LDVKVLLREAARARRIPVLMATS  229 (722)
T ss_pred             HHHHhc--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEcC
Confidence            899998  89999999875  345555544 55 5567787775

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=93.12  E-value=1.1  Score=36.21  Aligned_cols=104  Identities=16%  Similarity=0.203  Sum_probs=63.7

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCC--------------chhhhhccCce--EEEEeccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGES--------------DQEFAEFSSKI--LHLKGDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~v--~~~~~d~~d~~~l~   65 (249)
                      |.|-+|..+++.|...|. ++.+++.+.-.....-....              ...+.+..+.+  +.+..++.+.+...
T Consensus         6 GaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~~~~~~   85 (312)
T cd01489           6 GAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKDPDFNV   85 (312)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCCccchH
Confidence            457799999999999995 67777766655322111100              12223334444  44455666543345


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHH-hCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILD-ALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~-a~~-~~~~~i~~Ss~~v~~  110 (249)
                      +.++  ++|+|+.+... . ..+..+. .|+ ...+||..++.+.+|
T Consensus        86 ~f~~--~~DvVv~a~Dn-~-~ar~~in~~c~~~~ip~I~~gt~G~~G  128 (312)
T cd01489          86 EFFK--QFDLVFNALDN-L-AARRHVNKMCLAADVPLIESGTTGFLG  128 (312)
T ss_pred             HHHh--cCCEEEECCCC-H-HHHHHHHHHHHHCCCCEEEEecCccee
Confidence            6677  99999988764 3 3444444 466 556888888777665

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.12  E-value=0.24  Score=40.56  Aligned_cols=89  Identities=17%  Similarity=0.191  Sum_probs=50.0

Q ss_pred             CCCcccchHHHHHHHHHc-CCe---EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||||++|+.+++.|.++ .++   +..+....+. -+.+.          ..+.....-++ |++.    +.  ++|+|
T Consensus        11 vGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~sa-Gk~~~----------~~~~~l~v~~~-~~~~----~~--~~Div   72 (347)
T PRK06728         11 VGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSA-GKTVQ----------FKGREIIIQEA-KINS----FE--GVDIA   72 (347)
T ss_pred             EeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccC-CCCee----------eCCcceEEEeC-CHHH----hc--CCCEE
Confidence            599999999999999964 566   5555433222 11110          00112222233 3333    34  78999


Q ss_pred             EecCCCChhhhHHHHHhCC-CCCeEEEeeccccc
Q 025702           77 YDINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~  109 (249)
                      |.+++.  ...+.+...+. ....+|=.|+..-+
T Consensus        73 f~a~~~--~~s~~~~~~~~~~G~~VID~Ss~fR~  104 (347)
T PRK06728         73 FFSAGG--EVSRQFVNQAVSSGAIVIDNTSEYRM  104 (347)
T ss_pred             EECCCh--HHHHHHHHHHHHCCCEEEECchhhcC
Confidence            988875  34555555443 33467777766654

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=93.09  E-value=1.1  Score=34.49  Aligned_cols=103  Identities=15%  Similarity=0.109  Sum_probs=60.5

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccc---cCCC---CC--------CchhhhhccCceEEEEec-cCCHHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA---QQLP---GE--------SDQEFAEFSSKILHLKGD-RKDYDFVKS   66 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~---~~~~---~~--------~~~~~~~~~~~v~~~~~d-~~d~~~l~~   66 (249)
                      |.|-+|+++++.|...|. ++++++.+.-...   .++.   ..        ....+.+..+.+++...+ ..+++.+..
T Consensus        18 G~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i~~~~~~~   97 (231)
T cd00755          18 GLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFLTPDNSED   97 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeecCHhHHHH
Confidence            557799999999999995 7777776543311   1110   00        112344445555554332 223455666


Q ss_pred             hhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeeccc
Q 025702           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAG  107 (249)
Q Consensus        67 ~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~  107 (249)
                      ++. .++|+||.+... ...-..+.+.|+ ...++|...+.+
T Consensus        98 l~~-~~~D~VvdaiD~-~~~k~~L~~~c~~~~ip~I~s~g~g  137 (231)
T cd00755          98 LLG-GDPDFVVDAIDS-IRAKVALIAYCRKRKIPVISSMGAG  137 (231)
T ss_pred             Hhc-CCCCEEEEcCCC-HHHHHHHHHHHHHhCCCEEEEeCCc
Confidence            664 269999998765 334455677777 445666655433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=93.04  E-value=0.22  Score=39.22  Aligned_cols=31  Identities=16%  Similarity=0.221  Sum_probs=27.0

Q ss_pred             CCCcccchHHHHHHHHHcC----CeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g----~~v~~~~r~~~~   31 (249)
                      +|++|.+|..++..|+..|    .++..++.++..
T Consensus         4 IGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~   38 (263)
T cd00650           4 IGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEK   38 (263)
T ss_pred             ECCCChHHHHHHHHHHhCCCCcceEEEEEeCCccc
Confidence            4888999999999999988    799999987744

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=92.93  E-value=0.44  Score=38.42  Aligned_cols=92  Identities=22%  Similarity=0.194  Sum_probs=58.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH-HHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~-~~l~~~~~~~~~d~Vi~~   79 (249)
                      .|++|.+|..+++.+...|.+|++++++.++.... .        .  -++..+ .+..+. ..+.+.....++|.|+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~--------~--~g~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd05280         153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-K--------S--LGASEV-LDREDLLDESKKPLLKARWAGAIDT  220 (325)
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H--------h--cCCcEE-EcchhHHHHHHHHhcCCCccEEEEC
Confidence            47889999999998888999999998886552211 1        0  122221 222222 122333333478999998


Q ss_pred             CCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           80 NGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      .+.  ......++.++...++|.+++.
T Consensus       221 ~~~--~~~~~~~~~l~~~g~~v~~g~~  245 (325)
T cd05280         221 VGG--DVLANLLKQTKYGGVVASCGNA  245 (325)
T ss_pred             Cch--HHHHHHHHhhcCCCEEEEEecC
Confidence            774  4566677777756688888754

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=92.93  E-value=0.35  Score=39.10  Aligned_cols=91  Identities=15%  Similarity=0.104  Sum_probs=58.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|.+|..+++.+...|.+|+++++++.+.... .        +  -++..+ .|..+  .+.+... ...++|+|++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~--------~--~g~~~v-~~~~~~~~~~~~~~-~~~~~d~vld  219 (326)
T cd08289         153 TGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-K--------K--LGAKEV-IPREELQEESIKPL-EKQRWAGAVD  219 (326)
T ss_pred             EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-H--------H--cCCCEE-EcchhHHHHHHHhh-ccCCcCEEEE
Confidence            47889999999999999999999998887652211 1        0  122211 12222  2333333 2347999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      +.+.  ......+..++...++|.++..
T Consensus       220 ~~g~--~~~~~~~~~l~~~G~~i~~g~~  245 (326)
T cd08289         220 PVGG--KTLAYLLSTLQYGGSVAVSGLT  245 (326)
T ss_pred             CCcH--HHHHHHHHHhhcCCEEEEEeec
Confidence            9874  4556677777766788888753

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=92.88  E-value=0.44  Score=38.19  Aligned_cols=92  Identities=15%  Similarity=0.159  Sum_probs=57.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +|++|.+|..+++.+...|.+|+++++++..... +.        +  -++.. ..|..+.   ..+.......++|.++
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  218 (325)
T cd08253         151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAEL-VR--------Q--AGADA-VFNYRAEDLADRILAATAGQGVDVII  218 (325)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH--------H--cCCCE-EEeCCCcCHHHHHHHHcCCCceEEEE
Confidence            4788999999999999999999999887654211 10        0  11211 1233332   3344444445799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      ++++..  .....++.+....+++.+++.
T Consensus       219 ~~~~~~--~~~~~~~~l~~~g~~v~~~~~  245 (325)
T cd08253         219 EVLANV--NLAKDLDVLAPGGRIVVYGSG  245 (325)
T ss_pred             ECCchH--HHHHHHHhhCCCCEEEEEeec
Confidence            988752  334444555555688887753

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=92.87  E-value=0.19  Score=40.33  Aligned_cols=29  Identities=24%  Similarity=0.469  Sum_probs=26.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..++..|.+.|++|++.+|++..
T Consensus         9 G~G~mG~~~a~~l~~~g~~v~~~d~~~~~   37 (296)
T PRK11559          9 GLGIMGKPMSKNLLKAGYSLVVYDRNPEA   37 (296)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999988755

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=92.83  E-value=0.35  Score=38.88  Aligned_cols=29  Identities=28%  Similarity=0.473  Sum_probs=26.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.+++.|++.|++|.+.+|++..
T Consensus         7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~   35 (301)
T PRK09599          7 GLGRMGGNMARRLLRGGHEVVGYDRNPEA   35 (301)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57899999999999999999999998765

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=92.73  E-value=0.32  Score=39.12  Aligned_cols=29  Identities=21%  Similarity=0.350  Sum_probs=26.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.+++.|++.|++|++.+|+++.
T Consensus         7 GlG~mG~~mA~~L~~~g~~v~v~dr~~~~   35 (299)
T PRK12490          7 GLGKMGGNMAERLREDGHEVVGYDVNQEA   35 (299)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            57899999999999999999999998655

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=92.71  E-value=0.35  Score=38.79  Aligned_cols=29  Identities=28%  Similarity=0.475  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..++..|++.|++|++.+|++..
T Consensus         8 GlG~mG~~mA~~l~~~G~~V~v~d~~~~~   36 (296)
T PRK15461          8 GLGQMGSPMASNLLKQGHQLQVFDVNPQA   36 (296)
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999998765

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.68  E-value=0.062  Score=43.41  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=26.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..++..|++.|++|+++++++..
T Consensus        11 GaG~mG~~iA~~l~~~g~~V~~~d~~~~~   39 (311)
T PRK06130         11 GAGTMGSGIAALFARKGLQVVLIDVMEGA   39 (311)
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            56999999999999999999999987755

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=92.66  E-value=0.3  Score=39.41  Aligned_cols=29  Identities=31%  Similarity=0.582  Sum_probs=26.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|.-|++|+..|.++||+|+...|++..
T Consensus         8 GaGswGTALA~~la~ng~~V~lw~r~~~~   36 (329)
T COG0240           8 GAGSWGTALAKVLARNGHEVRLWGRDEEI   36 (329)
T ss_pred             cCChHHHHHHHHHHhcCCeeEEEecCHHH
Confidence            56889999999999999999999998654

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=92.66  E-value=0.76  Score=37.12  Aligned_cols=72  Identities=21%  Similarity=0.159  Sum_probs=42.4

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|.+|++++..|...+  .++..++.+  ...     ....++........+.... .+ +++.+.++  ++|+||-
T Consensus         6 IGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~-----g~alDL~~~~~~~~i~~~~-~~-~~~y~~~~--daDivvi   74 (310)
T cd01337           6 LGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTP-----GVAADLSHINTPAKVTGYL-GP-EELKKALK--GADVVVI   74 (310)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccc-----eeehHhHhCCCcceEEEec-CC-CchHHhcC--CCCEEEE
Confidence            5888999999999998887  588888877  211     1111122211112222110 11 12334455  9999999


Q ss_pred             cCCCC
Q 025702           79 INGRE   83 (249)
Q Consensus        79 ~~~~~   83 (249)
                      ++|..
T Consensus        75 taG~~   79 (310)
T cd01337          75 PAGVP   79 (310)
T ss_pred             eCCCC
Confidence            99873

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=92.60  E-value=1.2  Score=35.45  Aligned_cols=102  Identities=19%  Similarity=0.187  Sum_probs=63.2

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEEEEeccCCHHHHHHh
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLKGDRKDYDFVKSS   67 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~~~d~~d~~~l~~~   67 (249)
                      |.|-+|..+++.|...|. ++++++.+.-.....-...              ...++.+..+.+++...+-.   ...+.
T Consensus        26 G~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~---~~~~~  102 (286)
T cd01491          26 GLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGP---LTTDE  102 (286)
T ss_pred             cCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEecc---CCHHH
Confidence            456699999999999995 6777776654432211110              01234445555554433221   11244


Q ss_pred             hhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeecccccc
Q 025702           68 LSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        68 ~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      +.  ++|+||.+.. +......+-++|+ ...+||...+.+.+|
T Consensus       103 l~--~fdvVV~~~~-~~~~~~~in~~c~~~~ipfI~a~~~G~~G  143 (286)
T cd01491         103 LL--KFQVVVLTDA-SLEDQLKINEFCHSPGIKFISADTRGLFG  143 (286)
T ss_pred             Hh--cCCEEEEecC-CHHHHHHHHHHHHHcCCEEEEEeccccEE
Confidence            55  8999998865 4444555666677 567899998888776

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=92.59  E-value=0.57  Score=37.91  Aligned_cols=79  Identities=14%  Similarity=0.131  Sum_probs=48.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.+..-|-+|++.+|.....               ..++.        ...++++++  .+|+|+.+...
T Consensus       152 G~G~IG~~vA~~~~~fgm~V~~~d~~~~~~---------------~~~~~--------~~~l~ell~--~sDvv~lh~Pl  206 (311)
T PRK08410        152 GLGTIGKRVAKIAQAFGAKVVYYSTSGKNK---------------NEEYE--------RVSLEELLK--TSDIISIHAPL  206 (311)
T ss_pred             CCCHHHHHHHHHHhhcCCEEEEECCCcccc---------------ccCce--------eecHHHHhh--cCCEEEEeCCC
Confidence            578999999999988899999998853220               01111        224667777  78888766554


Q ss_pred             ChhhhHH-----HHHhCCCCCeEEEeeccc
Q 025702           83 EADEVEP-----ILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        83 ~~~~~~~-----~~~a~~~~~~~i~~Ss~~  107 (249)
                      + ..++.     .++.++....||.+|=..
T Consensus       207 t-~~T~~li~~~~~~~Mk~~a~lIN~aRG~  235 (311)
T PRK08410        207 N-EKTKNLIAYKELKLLKDGAILINVGRGG  235 (311)
T ss_pred             C-chhhcccCHHHHHhCCCCeEEEECCCcc
Confidence            2 22333     344444444666665433

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=92.59  E-value=0.057  Score=38.88  Aligned_cols=85  Identities=21%  Similarity=0.275  Sum_probs=46.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|..|++++..|.++|++|...+|++...........   ...+.+++.+-. .+.=..++.++++  +.|+|+-... 
T Consensus         6 GaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~---n~~~~~~~~l~~-~i~~t~dl~~a~~--~ad~IiiavP-   78 (157)
T PF01210_consen    6 GAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQ---NPKYLPGIKLPE-NIKATTDLEEALE--DADIIIIAVP-   78 (157)
T ss_dssp             SSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTS---ETTTSTTSBEET-TEEEESSHHHHHT--T-SEEEE-S--
T ss_pred             CcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCC---CCCCCCCcccCc-ccccccCHHHHhC--cccEEEeccc-
Confidence            56999999999999999999999998743211000000   000011111110 1111123456666  8899996655 


Q ss_pred             ChhhhHHHHHhCC
Q 025702           83 EADEVEPILDALP   95 (249)
Q Consensus        83 ~~~~~~~~~~a~~   95 (249)
                       ....+.+++.+.
T Consensus        79 -s~~~~~~~~~l~   90 (157)
T PF01210_consen   79 -SQAHREVLEQLA   90 (157)
T ss_dssp             -GGGHHHHHHHHT
T ss_pred             -HHHHHHHHHHHh
Confidence             455667777755

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07411 hypothetical protein; Validated

Probab=92.46  E-value=1.6  Score=36.62  Aligned_cols=103  Identities=15%  Similarity=0.020  Sum_probs=61.8

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEEEE--eccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLK--GDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~~--~d~~d~~~l~   65 (249)
                      |.|-+|..+++.|...|. ++++++.+.-.....-...              ....+.+..+.+++..  ..++ .+...
T Consensus        45 G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~-~~~~~  123 (390)
T PRK07411         45 GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLS-SENAL  123 (390)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccC-HHhHH
Confidence            457799999999999995 6777766544422111111              1123334455554443  3343 44566


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHH-hCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILD-ALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~-a~~-~~~~~i~~Ss~~v~~  110 (249)
                      +++.  ++|+||.+....  .++.++. +|. ...++|+.+..+-+|
T Consensus       124 ~~~~--~~D~Vvd~~d~~--~~r~~ln~~~~~~~~p~v~~~~~g~~g  166 (390)
T PRK07411        124 DILA--PYDVVVDGTDNF--PTRYLVNDACVLLNKPNVYGSIFRFEG  166 (390)
T ss_pred             HHHh--CCCEEEECCCCH--HHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence            7787  899999998752  3444444 355 456788776655544

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=92.40  E-value=0.61  Score=37.76  Aligned_cols=93  Identities=19%  Similarity=0.152  Sum_probs=58.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      .|++|-+|..+++.+...|.+|+++++++..... +.        .  -++..+ .+..+.   ..+..... .++|.|+
T Consensus       146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~v-~~~~~~~~~~~~~~~~~-~~vd~v~  212 (329)
T cd08250         146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEF-LK--------S--LGCDRP-INYKTEDLGEVLKKEYP-KGVDVVY  212 (329)
T ss_pred             EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHH-HH--------H--cCCceE-EeCCCccHHHHHHHhcC-CCCeEEE
Confidence            3789999999999999999999999887654211 11        0  111111 122221   23333222 4799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeecccc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ++.+.  ......++.++...++|.+++...
T Consensus       213 ~~~g~--~~~~~~~~~l~~~g~~v~~g~~~~  241 (329)
T cd08250         213 ESVGG--EMFDTCVDNLALKGRLIVIGFISG  241 (329)
T ss_pred             ECCcH--HHHHHHHHHhccCCeEEEEecccC
Confidence            98873  456666777776678998886543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=92.38  E-value=0.51  Score=37.89  Aligned_cols=92  Identities=21%  Similarity=0.206  Sum_probs=58.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCce-EEEEeccCC-HHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~d~~d-~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|.+|+.++..+...|.+|+.++++..+... +.        .  -++ .++..+..+ .+.+.......++|.+++
T Consensus       151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  219 (328)
T cd08268         151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDA-LL--------A--LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFD  219 (328)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HH--------H--cCCCEEEecCCccHHHHHHHHhCCCCceEEEE
Confidence            4888999999999999999999999887644211 11        0  111 122212111 223444444347999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +.+.  ......++.+....+++.++.
T Consensus       220 ~~~~--~~~~~~~~~l~~~g~~v~~g~  244 (328)
T cd08268         220 PVGG--PQFAKLADALAPGGTLVVYGA  244 (328)
T ss_pred             CCch--HhHHHHHHhhccCCEEEEEEe
Confidence            8875  455666777765568887764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=92.36  E-value=0.26  Score=39.03  Aligned_cols=29  Identities=31%  Similarity=0.466  Sum_probs=26.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|..|++++..|++.||+|++.+|..++
T Consensus        42 GLG~MG~~M~~nLik~G~kVtV~dr~~~k   70 (327)
T KOG0409|consen   42 GLGNMGSAMVSNLIKAGYKVTVYDRTKDK   70 (327)
T ss_pred             eeccchHHHHHHHHHcCCEEEEEeCcHHH
Confidence            56889999999999999999999999876

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=92.33  E-value=0.94  Score=36.64  Aligned_cols=71  Identities=21%  Similarity=0.193  Sum_probs=42.6

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|.+|.+++..|...+.  ++.+++.++.. ...      .++........+....  +.+.+.+.++  +.|+||-
T Consensus         5 iGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-g~a------~DL~~~~~~~~i~~~~--~~~~~~~~~~--daDivvi   73 (312)
T TIGR01772         5 LGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-GVA------ADLSHIPTAASVKGFS--GEEGLENALK--GADVVVI   73 (312)
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-EEE------chhhcCCcCceEEEec--CCCchHHHcC--CCCEEEE
Confidence            58889999999999988874  78888887621 111      1111111112222111  1112334566  9999999


Q ss_pred             cCCC
Q 025702           79 INGR   82 (249)
Q Consensus        79 ~~~~   82 (249)
                      ++|.
T Consensus        74 taG~   77 (312)
T TIGR01772        74 PAGV   77 (312)
T ss_pred             eCCC
Confidence            9886

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=92.33  E-value=1.1  Score=36.05  Aligned_cols=91  Identities=22%  Similarity=0.142  Sum_probs=59.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +|++|.+|..+++.+...|.+|+++++++..... +.        +  -++.. ..+..+.   +.+.......++|.|+
T Consensus       149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl  216 (324)
T cd08244         149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL-VR--------A--LGADV-AVDYTRPDWPDQVREALGGGGVTVVL  216 (324)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH--------H--cCCCE-EEecCCccHHHHHHHHcCCCCceEEE
Confidence            4789999999999999999999999887655211 11        0  11211 1233332   3333344434799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++.+..  .....+..+....++|.++.
T Consensus       217 ~~~g~~--~~~~~~~~l~~~g~~v~~g~  242 (324)
T cd08244         217 DGVGGA--IGRAALALLAPGGRFLTYGW  242 (324)
T ss_pred             ECCChH--hHHHHHHHhccCcEEEEEec
Confidence            998853  34667777776678888874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN03139 formate dehydrogenase; Provisional

Probab=92.29  E-value=0.49  Score=39.40  Aligned_cols=85  Identities=13%  Similarity=0.038  Sum_probs=52.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|..-|.+|++.+|....... ..          ..++.       -.+.++++++  .+|+|+.+...
T Consensus       206 G~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~-~~----------~~g~~-------~~~~l~ell~--~sDvV~l~lPl  265 (386)
T PLN03139        206 GAGRIGRLLLQRLKPFNCNLLYHDRLKMDPEL-EK----------ETGAK-------FEEDLDAMLP--KCDVVVINTPL  265 (386)
T ss_pred             eecHHHHHHHHHHHHCCCEEEEECCCCcchhh-Hh----------hcCce-------ecCCHHHHHh--hCCEEEEeCCC
Confidence            57899999999999999999998887532110 00          01111       1234667777  88999977664


Q ss_pred             ChhhhHHH-----HHhCCCCCeEEEeecccc
Q 025702           83 EADEVEPI-----LDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~~~~~~-----~~a~~~~~~~i~~Ss~~v  108 (249)
                      + ..++.+     +..++...-||.++-..+
T Consensus       266 t-~~T~~li~~~~l~~mk~ga~lIN~aRG~i  295 (386)
T PLN03139        266 T-EKTRGMFNKERIAKMKKGVLIVNNARGAI  295 (386)
T ss_pred             C-HHHHHHhCHHHHhhCCCCeEEEECCCCch
Confidence            3 334444     444554456666664443

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=92.26  E-value=0.44  Score=29.75  Aligned_cols=29  Identities=38%  Similarity=0.581  Sum_probs=27.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|++|-.++..|.+.|.+|+++.|++..
T Consensus         6 GgG~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    6 GGGFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             SSSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CcCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            67999999999999999999999999876

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=92.23  E-value=0.17  Score=34.32  Aligned_cols=86  Identities=15%  Similarity=0.103  Sum_probs=44.5

Q ss_pred             CcccchHHHHHHHHHc----CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKE----GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~----g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |.|.+|+.+++.|.+.    +.++.++..+. ......       ......+..+ .   .|.+   ++++...+|+||.
T Consensus         1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~-~~~~~~-------~~~~~~~~~~-~---~~~~---~~~~~~~~dvvVE   65 (117)
T PF03447_consen    1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRS-MLISKD-------WAASFPDEAF-T---TDLE---ELIDDPDIDVVVE   65 (117)
T ss_dssp             --SHHHHHHHHHHHHTHHHCEEEEEEEEESS-EEEETT-------HHHHHTHSCE-E---SSHH---HHHTHTT-SEEEE
T ss_pred             CCCHHHHHHHHHHHhCcccCCEEEEEEEECC-chhhhh-------hhhhcccccc-c---CCHH---HHhcCcCCCEEEE
Confidence            6799999999999986    56777777665 211100       0000011111 1   2333   4444337999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           79 INGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      +++. ......+.++++...++|-.|
T Consensus        66 ~t~~-~~~~~~~~~~L~~G~~VVt~n   90 (117)
T PF03447_consen   66 CTSS-EAVAEYYEKALERGKHVVTAN   90 (117)
T ss_dssp             -SSC-HHHHHHHHHHHHTTCEEEES-
T ss_pred             CCCc-hHHHHHHHHHHHCCCeEEEEC
Confidence            9554 333333455566556777555

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=92.22  E-value=0.61  Score=38.32  Aligned_cols=71  Identities=24%  Similarity=0.207  Sum_probs=44.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh--hCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS--AKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~--~~~~d~Vi~   78 (249)
                      .||+|-+|+..++-+...|..+++.+++.+....          ... -+.. ...|+.+++..+...+  ..++|+|++
T Consensus       164 ~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l----------~k~-lGAd-~vvdy~~~~~~e~~kk~~~~~~DvVlD  231 (347)
T KOG1198|consen  164 LGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL----------VKK-LGAD-EVVDYKDENVVELIKKYTGKGVDVVLD  231 (347)
T ss_pred             EeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH----------HHH-cCCc-EeecCCCHHHHHHHHhhcCCCccEEEE
Confidence            4899999999999999989444444444443211          000 1111 2347777665555554  347999999


Q ss_pred             cCCCC
Q 025702           79 INGRE   83 (249)
Q Consensus        79 ~~~~~   83 (249)
                      |.+..
T Consensus       232 ~vg~~  236 (347)
T KOG1198|consen  232 CVGGS  236 (347)
T ss_pred             CCCCC
Confidence            99874

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=92.11  E-value=0.52  Score=37.88  Aligned_cols=76  Identities=14%  Similarity=0.064  Sum_probs=48.5

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      .|++|+.|..|++.|..+. .++..++.....                         +..+.   .++++  ++|+||.+
T Consensus         7 vGasGy~G~el~rlL~~HP~~el~~l~s~~~~-------------------------~~~~~---~~~~~--~~D~vFla   56 (310)
T TIGR01851         7 DGEAGTTGLQIRERLSGRDDIELLSIAPDRRK-------------------------DAAER---AKLLN--AADVAILC   56 (310)
T ss_pred             ECCCChhHHHHHHHHhCCCCeEEEEEeccccc-------------------------CcCCH---hHhhc--CCCEEEEC
Confidence            4999999999999999985 466666543221                         11122   23445  78999988


Q ss_pred             CCCChhhhHHHHHhCC-CCCeEEEeecccc
Q 025702           80 NGREADEVEPILDALP-NLEQFIYCSSAGV  108 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v  108 (249)
                      .+.  .....++..+. ...++|=+|+..-
T Consensus        57 lp~--~~s~~~~~~~~~~g~~VIDlSadfR   84 (310)
T TIGR01851        57 LPD--DAAREAVSLVDNPNTCIIDASTAYR   84 (310)
T ss_pred             CCH--HHHHHHHHHHHhCCCEEEECChHHh
Confidence            764  34455555543 3347888886553

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=92.10  E-value=0.46  Score=40.95  Aligned_cols=30  Identities=17%  Similarity=0.447  Sum_probs=27.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |.|.+|+.+++.|+++|++|.+.+|++++.
T Consensus        13 GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~   42 (493)
T PLN02350         13 GLAVMGQNLALNIAEKGFPISVYNRTTSKV   42 (493)
T ss_pred             eeHHHHHHHHHHHHhCCCeEEEECCCHHHH
Confidence            568899999999999999999999987764

>cd08293 PTGR2 Prostaglandin reductase

Probab=92.06  E-value=0.7  Score=37.71  Aligned_cols=92  Identities=14%  Similarity=0.156  Sum_probs=57.8

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~V   76 (249)
                      +||+|-+|..+++.+...|. +|+++++++++.....         + .-++..+ .|..+   .+.+.++.. .++|+|
T Consensus       161 ~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~---------~-~lGa~~v-i~~~~~~~~~~i~~~~~-~gvd~v  228 (345)
T cd08293         161 SGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLK---------S-ELGFDAA-INYKTDNVAERLRELCP-EGVDVY  228 (345)
T ss_pred             ECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH---------H-hcCCcEE-EECCCCCHHHHHHHHCC-CCceEE
Confidence            48899999999998888898 7999988765421100         0 0122211 12222   233443332 479999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      +++.+..  .....++.++...+++.++..
T Consensus       229 id~~g~~--~~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         229 FDNVGGE--ISDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             EECCCcH--HHHHHHHHhccCCEEEEEeee
Confidence            9998853  356677777766688887743

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=92.02  E-value=0.3  Score=38.71  Aligned_cols=31  Identities=26%  Similarity=0.416  Sum_probs=27.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      ++|.|.+|..+++.|.+.|+.|.++.++...
T Consensus         8 IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~   38 (279)
T COG0287           8 IVGLGLMGGSLARALKEAGLVVRIIGRDRSA   38 (279)
T ss_pred             EECCchHHHHHHHHHHHcCCeEEEEeecCcH
Confidence            3689999999999999999999888887765

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=91.87  E-value=1.3  Score=34.13  Aligned_cols=104  Identities=18%  Similarity=0.152  Sum_probs=66.7

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCcc------ccCC-CCC-------CchhhhhccCceEEEEe-ccCCHHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI------AQQL-PGE-------SDQEFAEFSSKILHLKG-DRKDYDFVKS   66 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~------~~~~-~~~-------~~~~~~~~~~~v~~~~~-d~~d~~~l~~   66 (249)
                      |-|-+|+..+.+|.+.|. ++.+++-+.-..      ...+ ...       ++++..+..+..++... |+.+++.+++
T Consensus        37 GiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t~en~~~  116 (263)
T COG1179          37 GIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFITEENLED  116 (263)
T ss_pred             ecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhCHhHHHH
Confidence            447799999999999984 566655433221      1111 111       22455556677777654 5568899999


Q ss_pred             hhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeecccccc
Q 025702           67 SLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        67 ~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      ++.. ++|.||.+.-. +..-..+++.|. ...+  ++||+++=+
T Consensus       117 ~~~~-~~DyvIDaiD~-v~~Kv~Li~~c~~~ki~--vIss~Gag~  157 (263)
T COG1179         117 LLSK-GFDYVIDAIDS-VRAKVALIAYCRRNKIP--VISSMGAGG  157 (263)
T ss_pred             HhcC-CCCEEEEchhh-hHHHHHHHHHHHHcCCC--EEeeccccC
Confidence            9874 89999988764 455566788787 3334  556666643

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=91.78  E-value=0.46  Score=32.26  Aligned_cols=74  Identities=16%  Similarity=0.056  Sum_probs=43.7

Q ss_pred             ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCCCh
Q 025702            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA   84 (249)
Q Consensus         5 G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~~~   84 (249)
                      +..|..+.+.|.+.|++|+.+.-+....                .+.. .+-++.      +.-.  .+|.++-+..  .
T Consensus        13 ~~~g~~v~~~l~~~G~~v~~Vnp~~~~i----------------~G~~-~y~sl~------e~p~--~iDlavv~~~--~   65 (116)
T PF13380_consen   13 GKFGYRVLRNLKAAGYEVYPVNPKGGEI----------------LGIK-CYPSLA------EIPE--PIDLAVVCVP--P   65 (116)
T ss_dssp             TSHHHHHHHHHHHTT-EEEEESTTCSEE----------------TTEE--BSSGG------GCSS--T-SEEEE-S---H
T ss_pred             CChHHHHHHHHHhCCCEEEEECCCceEE----------------CcEE-eecccc------CCCC--CCCEEEEEcC--H
Confidence            5689999999999999999886554331                1222 122222      2112  7888886655  4


Q ss_pred             hhhHHHHHhCC--CCCeEEEeec
Q 025702           85 DEVEPILDALP--NLEQFIYCSS  105 (249)
Q Consensus        85 ~~~~~~~~a~~--~~~~~i~~Ss  105 (249)
                      ..+..+++.|.  +++.+++.++
T Consensus        66 ~~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   66 DKVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             HHHHHHHHHHHHHT-SEEEE-TT
T ss_pred             HHHHHHHHHHHHcCCCEEEEEcc
Confidence            56666777765  7888888775

>PRK14852 hypothetical protein; Provisional

Probab=91.74  E-value=1.5  Score=40.81  Aligned_cols=104  Identities=13%  Similarity=-0.017  Sum_probs=64.6

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCcccc---CCCCC-----------CchhhhhccCceEEEEec-cCCHHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQ---QLPGE-----------SDQEFAEFSSKILHLKGD-RKDYDFVKS   66 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~---~~~~~-----------~~~~~~~~~~~v~~~~~d-~~d~~~l~~   66 (249)
                      |.|-+|+.++..|...|. ++++++.+.-....   ++...           ....+.+..+.+++...+ --+.+.+.+
T Consensus       339 GlGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~~I~~en~~~  418 (989)
T PRK14852        339 GLGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEGVAAETIDA  418 (989)
T ss_pred             CCcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEecCCCHHHHHH
Confidence            457799999999999995 67777665544211   11100           112444556666655442 235677888


Q ss_pred             hhhhCCCcEEEecCCCCh-hhhHHHHHhCC-CCCeEEEeecccc
Q 025702           67 SLSAKGFDVVYDINGREA-DEVEPILDALP-NLEQFIYCSSAGV  108 (249)
Q Consensus        67 ~~~~~~~d~Vi~~~~~~~-~~~~~~~~a~~-~~~~~i~~Ss~~v  108 (249)
                      +++  ++|+||.+..... ...+.+.+.|. ....+|+.++.+-
T Consensus       419 fl~--~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~ag~~G~  460 (989)
T PRK14852        419 FLK--DVDLLVDGIDFFALDIRRRLFNRALELGIPVITAGPLGY  460 (989)
T ss_pred             Hhh--CCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEeecccc
Confidence            888  9999998876533 23345555666 5568887776443

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=91.69  E-value=0.6  Score=37.29  Aligned_cols=92  Identities=17%  Similarity=0.172  Sum_probs=56.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +|++|-+|..+++.+...|.+|++++++...... +.        .  -++.. ..+..+.   +.+.+.....++|.++
T Consensus       146 ~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (323)
T cd05276         146 HGGASGVGTAAIQLAKALGARVIATAGSEEKLEA-CR--------A--LGADV-AINYRTEDFAEEVKEATGGRGVDVIL  213 (323)
T ss_pred             EcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HH--------H--cCCCE-EEeCCchhHHHHHHHHhCCCCeEEEE
Confidence            4888999999999999999999998887544211 00        0  11111 1233322   3333444334799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      ++.+..  .....++.+....+++.++..
T Consensus       214 ~~~g~~--~~~~~~~~~~~~g~~i~~~~~  240 (323)
T cd05276         214 DMVGGD--YLARNLRALAPDGRLVLIGLL  240 (323)
T ss_pred             ECCchH--HHHHHHHhhccCCEEEEEecC
Confidence            998842  244455556645578877643

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=91.68  E-value=0.92  Score=36.49  Aligned_cols=91  Identities=14%  Similarity=0.118  Sum_probs=58.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi   77 (249)
                      .|++|.+|..+++.+...|.+|++++++..+... +.        +  -++.. ..+..+   ...+.+.....++|.|+
T Consensus       145 ~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl  212 (323)
T cd05282         145 NAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE-LK--------A--LGADE-VIDSSPEDLAQRVKEATGGAGARLAL  212 (323)
T ss_pred             cccccHHHHHHHHHHHHCCCeEEEEecChHHHHH-HH--------h--cCCCE-EecccchhHHHHHHHHhcCCCceEEE
Confidence            4788999999999999999999999887655211 11        0  11211 112222   23344444445799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++.+.  ......++.++...+++.++.
T Consensus       213 ~~~g~--~~~~~~~~~l~~~g~~v~~g~  238 (323)
T cd05282         213 DAVGG--ESATRLARSLRPGGTLVNYGL  238 (323)
T ss_pred             ECCCC--HHHHHHHHhhCCCCEEEEEcc
Confidence            99885  234566677775568887764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.64  E-value=0.62  Score=37.27  Aligned_cols=29  Identities=17%  Similarity=0.154  Sum_probs=26.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|.+|..++..|+.+|++|++.++++..
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (292)
T PRK07530         11 GAGQMGNGIAHVCALAGYDVLLNDVSADR   39 (292)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            56999999999999999999999998765

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=91.62  E-value=3.8  Score=32.02  Aligned_cols=85  Identities=24%  Similarity=0.302  Sum_probs=56.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh---hCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~---~~~~d~Vi~~   79 (249)
                      |.|-+|..+++.|...|.++++.....++.....           .++++. ..|...+|.++++.+   ..++|+++..
T Consensus       155 AAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-----------enG~~h-~I~y~~eD~v~~V~kiTngKGVd~vyDs  222 (336)
T KOG1197|consen  155 AAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-----------ENGAEH-PIDYSTEDYVDEVKKITNGKGVDAVYDS  222 (336)
T ss_pred             ccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-----------hcCCcc-eeeccchhHHHHHHhccCCCCceeeecc
Confidence            5788999999999999998888887766632211           245553 235555555554443   5689999998


Q ss_pred             CCCChhhhHHHHHhCCCCCeEE
Q 025702           80 NGREADEVEPILDALPNLEQFI  101 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i  101 (249)
                      .|.  +.+..-+.+++....+|
T Consensus       223 vG~--dt~~~sl~~Lk~~G~mV  242 (336)
T KOG1197|consen  223 VGK--DTFAKSLAALKPMGKMV  242 (336)
T ss_pred             ccc--hhhHHHHHHhccCceEE
Confidence            884  55566677777444544

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=91.61  E-value=1  Score=32.43  Aligned_cols=73  Identities=15%  Similarity=0.125  Sum_probs=46.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |=|.+|+.+++.|...|.+|++...+|....+           ....++++.        .+++++.  ..|++|.+.|.
T Consensus        30 GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alq-----------A~~dGf~v~--------~~~~a~~--~adi~vtaTG~   88 (162)
T PF00670_consen   30 GYGKVGKGIARALRGLGARVTVTEIDPIRALQ-----------AAMDGFEVM--------TLEEALR--DADIFVTATGN   88 (162)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH-----------HHHTT-EEE---------HHHHTT--T-SEEEE-SSS
T ss_pred             CCCcccHHHHHHHhhCCCEEEEEECChHHHHH-----------hhhcCcEec--------CHHHHHh--hCCEEEECCCC
Confidence            45889999999999999999999998866322           123455543        2455666  88999998887


Q ss_pred             ChhhhHHHHHhCCC
Q 025702           83 EADEVEPILDALPN   96 (249)
Q Consensus        83 ~~~~~~~~~~a~~~   96 (249)
                      ...-...-++.++.
T Consensus        89 ~~vi~~e~~~~mkd  102 (162)
T PF00670_consen   89 KDVITGEHFRQMKD  102 (162)
T ss_dssp             SSSB-HHHHHHS-T
T ss_pred             ccccCHHHHHHhcC
Confidence            55556777788873

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=91.58  E-value=0.57  Score=36.47  Aligned_cols=93  Identities=20%  Similarity=0.262  Sum_probs=56.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHH--hhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS--SLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~--~~~~~~~d~Vi~   78 (249)
                      +|++| +|..+++.+...|.+|+++++++..... +.        .  .+... ..|..+.+....  .....++|.+++
T Consensus       141 ~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~  207 (271)
T cd05188         141 LGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL-AK--------E--LGADH-VIDYKEEDLEEELRLTGGGGADVVID  207 (271)
T ss_pred             ECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH-HH--------H--hCCce-eccCCcCCHHHHHHHhcCCCCCEEEE
Confidence            47778 9999999999999999999887644211 10        0  01111 123332222222  222347999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      +++.. .....+++.++...+++.++...
T Consensus       208 ~~~~~-~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         208 AVGGP-ETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             CCCCH-HHHHHHHHhcccCCEEEEEccCC
Confidence            98742 34556667777556888887543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=91.56  E-value=0.16  Score=40.56  Aligned_cols=29  Identities=17%  Similarity=0.376  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|.+|..++..|+..|++|++.++++..
T Consensus        10 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (291)
T PRK06035         10 GSGVMGQGIAQVFARTGYDVTIVDVSEEI   38 (291)
T ss_pred             CccHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            56999999999999999999999998765

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=91.46  E-value=0.25  Score=40.25  Aligned_cols=29  Identities=28%  Similarity=0.332  Sum_probs=26.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|-+|+.++..|.+.|++|+++.|++..
T Consensus        11 G~G~mG~~ia~~L~~~G~~V~~~~r~~~~   39 (328)
T PRK14618         11 GAGAWGTALAVLAASKGVPVRLWARRPEF   39 (328)
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            56999999999999999999999997654

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=91.30  E-value=1  Score=36.06  Aligned_cols=28  Identities=29%  Similarity=0.459  Sum_probs=25.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~   30 (249)
                      |.|.+|..+++.|++.|++|.+.+|++.
T Consensus         7 GlG~MG~~ma~~L~~~G~~v~v~~~~~~   34 (292)
T PRK15059          7 GLGIMGTPMAINLARAGHQLHVTTIGPV   34 (292)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEeCCHh
Confidence            5799999999999999999999988753

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=91.22  E-value=0.83  Score=37.55  Aligned_cols=91  Identities=14%  Similarity=0.157  Sum_probs=56.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH----HHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~----~~l~~~~~~~~~d~V   76 (249)
                      +|++|-+|...++.+...|.+|+++++++.+......        +  -++..+ .|..+.    +.+.+... .++|+|
T Consensus       165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~--------~--lGa~~v-i~~~~~~~~~~~i~~~~~-~gvD~v  232 (348)
T PLN03154        165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN--------K--LGFDEA-FNYKEEPDLDAALKRYFP-EGIDIY  232 (348)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH--------h--cCCCEE-EECCCcccHHHHHHHHCC-CCcEEE
Confidence            4888999999999888889999998877654211000        0  122221 133221    22333322 379999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +++.+.  ......++.++...+++.++.
T Consensus       233 ~d~vG~--~~~~~~~~~l~~~G~iv~~G~  259 (348)
T PLN03154        233 FDNVGG--DMLDAALLNMKIHGRIAVCGM  259 (348)
T ss_pred             EECCCH--HHHHHHHHHhccCCEEEEECc
Confidence            999884  455667777775567776653

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=91.16  E-value=2  Score=34.89  Aligned_cols=67  Identities=13%  Similarity=0.060  Sum_probs=44.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++..|..... ....          ..++++     .   ++.++++  .+|+|+.+...
T Consensus        23 G~GsIG~amA~nL~d~G~~ViV~~r~~~s~-~~A~----------~~G~~v-----~---sl~Eaak--~ADVV~llLPd   81 (335)
T PRK13403         23 GYGSQGHAQAQNLRDSGVEVVVGVRPGKSF-EVAK----------ADGFEV-----M---SVSEAVR--TAQVVQMLLPD   81 (335)
T ss_pred             eEcHHHHHHHHHHHHCcCEEEEEECcchhh-HHHH----------HcCCEE-----C---CHHHHHh--cCCEEEEeCCC
Confidence            568999999999999999999988753221 1000          123322     1   3556776  89999988774


Q ss_pred             ChhhhHHHHH
Q 025702           83 EADEVEPILD   92 (249)
Q Consensus        83 ~~~~~~~~~~   92 (249)
                        ..+..++.
T Consensus        82 --~~t~~V~~   89 (335)
T PRK13403         82 --EQQAHVYK   89 (335)
T ss_pred             --hHHHHHHH
Confidence              33455553

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=91.08  E-value=0.35  Score=34.06  Aligned_cols=69  Identities=22%  Similarity=0.173  Sum_probs=38.5

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC----------HHHHHHhh--h
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----------YDFVKSSL--S   69 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d----------~~~l~~~~--~   69 (249)
                      ||.+..-..++++|.++|++|.+++...........          ..++.+....+..          ...+.+++  .
T Consensus         1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   70 (160)
T PF13579_consen    1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDEEE----------EDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAAR   70 (160)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-SEE----------ETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHC
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccccc----------cCCceEEeccCCccchhhhhHHHHHHHHHHHhhh
Confidence            677777889999999999999999987666422111          2455555543332          34556666  5


Q ss_pred             hCCCcEEEecC
Q 025702           70 AKGFDVVYDIN   80 (249)
Q Consensus        70 ~~~~d~Vi~~~   80 (249)
                      ..++|+|....
T Consensus        71 ~~~~Dvv~~~~   81 (160)
T PF13579_consen   71 RERPDVVHAHS   81 (160)
T ss_dssp             T---SEEEEEH
T ss_pred             ccCCeEEEecc
Confidence            55788766443

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=91.01  E-value=0.88  Score=36.77  Aligned_cols=92  Identities=14%  Similarity=0.169  Sum_probs=57.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      .|++|.+|..+++.+...|.+|+++++++........          .-++. ...+..+.   +.+.+... .++|+++
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~----------~~g~~-~~~~~~~~~~~~~v~~~~~-~~~d~vi  219 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVE----------ELGFD-AAINYKTPDLAEALKEAAP-DGIDVYF  219 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------hcCCc-eEEecCChhHHHHHHHhcc-CCceEEE
Confidence            4788999999999999999999999887654211100          01111 11122332   22333332 4799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      ++.+.  ......++.++...+++.+++.
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (329)
T cd05288         220 DNVGG--EILDAALTLLNKGGRIALCGAI  246 (329)
T ss_pred             EcchH--HHHHHHHHhcCCCceEEEEeec
Confidence            99874  4556667777755678877653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=90.98  E-value=0.93  Score=37.39  Aligned_cols=88  Identities=18%  Similarity=0.214  Sum_probs=47.4

Q ss_pred             CCCcccchHHHHHHHH-HcCCe---EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLV-KEGHQ---VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~-~~g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +|+||.+|+.+++.|. +..++   ++.+............           .+.....-++.+.+    .+.  ++|++
T Consensus         6 vGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f-----------~~~~~~v~~~~~~~----~~~--~vDiv   68 (366)
T TIGR01745         6 VGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSF-----------GGTTGTLQDAFDID----ALK--ALDII   68 (366)
T ss_pred             EcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCC-----------CCCcceEEcCcccc----ccc--CCCEE
Confidence            4999999999999999 44553   4444433222111111           11122223333322    234  89999


Q ss_pred             EecCCCChhhhHHHHHhCC--CC-CeEEEeeccc
Q 025702           77 YDINGREADEVEPILDALP--NL-EQFIYCSSAG  107 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~--~~-~~~i~~Ss~~  107 (249)
                      |.+++.  ..++.+...+.  +. ..+|=-||..
T Consensus        69 ffa~g~--~~s~~~~p~~~~aG~~~~VIDnSSa~  100 (366)
T TIGR01745        69 ITCQGG--DYTNEIYPKLRESGWQGYWIDAASSL  100 (366)
T ss_pred             EEcCCH--HHHHHHHHHHHhCCCCeEEEECChhh
Confidence            999985  45555555543  43 2445444433

>PRK06932 glycerate dehydrogenase; Provisional

Probab=90.86  E-value=1  Score=36.47  Aligned_cols=79  Identities=16%  Similarity=0.125  Sum_probs=49.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|..-|.+|++.+|....                  ..     + .....++++++  .+|+|+.+...
T Consensus       154 G~G~IG~~va~~l~~fg~~V~~~~~~~~~------------------~~-----~-~~~~~l~ell~--~sDiv~l~~Pl  207 (314)
T PRK06932        154 GKGCLGTEVGRLAQALGMKVLYAEHKGAS------------------VC-----R-EGYTPFEEVLK--QADIVTLHCPL  207 (314)
T ss_pred             CCCHHHHHHHHHHhcCCCEEEEECCCccc------------------cc-----c-cccCCHHHHHH--hCCEEEEcCCC
Confidence            56899999999998889999988764321                  00     0 01234777887  88998876665


Q ss_pred             ChhhhHH-----HHHhCCCCCeEEEeecccc
Q 025702           83 EADEVEP-----ILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~~~~~-----~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +. .++.     .++.++....||.+|=..+
T Consensus       208 t~-~T~~li~~~~l~~mk~ga~lIN~aRG~~  237 (314)
T PRK06932        208 TE-TTQNLINAETLALMKPTAFLINTGRGPL  237 (314)
T ss_pred             Ch-HHhcccCHHHHHhCCCCeEEEECCCccc
Confidence            32 2433     3444554456666664443

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=90.86  E-value=0.81  Score=37.31  Aligned_cols=89  Identities=12%  Similarity=0.068  Sum_probs=54.3

Q ss_pred             cccchHHHHHHHHHcCCe-EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcEEEecC
Q 025702            4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|.+|..+++.+...|.+ |+++++++.+... .        .+  -++.. ..|..+  .+.+.+.....++|+||++.
T Consensus       172 ~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~-~--------~~--~ga~~-~i~~~~~~~~~~~~~~~~~~~d~vid~~  239 (339)
T cd08239         172 AGPVGLGALMLARALGAEDVIGVDPSPERLEL-A--------KA--LGADF-VINSGQDDVQEIRELTSGAGADVAIECS  239 (339)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-H--------HH--hCCCE-EEcCCcchHHHHHHHhCCCCCCEEEECC
Confidence            488999999999888988 8888877654211 0        01  12221 123333  33444444434799999998


Q ss_pred             CCChhhhHHHHHhCCCCCeEEEeec
Q 025702           81 GREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +.. ......++.++...+++.++.
T Consensus       240 g~~-~~~~~~~~~l~~~G~~v~~g~  263 (339)
T cd08239         240 GNT-AARRLALEAVRPWGRLVLVGE  263 (339)
T ss_pred             CCH-HHHHHHHHHhhcCCEEEEEcC
Confidence            853 233445666775568887764

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=90.81  E-value=0.88  Score=36.19  Aligned_cols=30  Identities=17%  Similarity=0.287  Sum_probs=26.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |.|.+|..++..|+..|++|+++++++...
T Consensus        10 G~G~mG~~ia~~la~~g~~V~~~d~~~~~~   39 (282)
T PRK05808         10 GAGTMGNGIAQVCAVAGYDVVMVDISDAAV   39 (282)
T ss_pred             ccCHHHHHHHHHHHHCCCceEEEeCCHHHH
Confidence            569999999999999999999999887653

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=90.78  E-value=1.5  Score=33.91  Aligned_cols=81  Identities=16%  Similarity=0.033  Sum_probs=54.6

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |||+ =++.|++.|...+..+++.+-.........            +....+.+-..+.+.+.+++++.++|.||...-
T Consensus         9 GGT~-Dar~la~~L~~~~~~~~~ss~t~~g~~l~~------------~~~~~~~~G~l~~e~l~~~l~e~~i~llIDATH   75 (257)
T COG2099           9 GGTS-DARALAKKLAAAPVDIILSSLTGYGAKLAE------------QIGPVRVGGFLGAEGLAAFLREEGIDLLIDATH   75 (257)
T ss_pred             eccH-HHHHHHHHhhccCccEEEEEcccccccchh------------ccCCeeecCcCCHHHHHHHHHHcCCCEEEECCC
Confidence            5655 588999999998855555554443321111            222356778889999999999999999998754


Q ss_pred             C-ChhhhHHHHHhCC
Q 025702           82 R-EADEVEPILDALP   95 (249)
Q Consensus        82 ~-~~~~~~~~~~a~~   95 (249)
                      . ......|.+++|+
T Consensus        76 PyAa~iS~Na~~aak   90 (257)
T COG2099          76 PYAARISQNAARAAK   90 (257)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            3 3345666666666

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=90.78  E-value=0.25  Score=39.29  Aligned_cols=29  Identities=31%  Similarity=0.297  Sum_probs=26.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..++..|.+.|++|++.+|++..
T Consensus         7 G~G~mG~sla~~L~~~g~~V~~~d~~~~~   35 (279)
T PRK07417          7 GLGLIGGSLGLDLRSLGHTVYGVSRREST   35 (279)
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            47999999999999999999999998654

>PRK05442 malate dehydrogenase; Provisional

Probab=90.74  E-value=0.85  Score=37.15  Aligned_cols=30  Identities=20%  Similarity=0.128  Sum_probs=24.5

Q ss_pred             CCCcccchHHHHHHHHHcCC-------eEEEEecCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKA   30 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-------~v~~~~r~~~   30 (249)
                      +|++|.+|++++..|...+.       ++..++..+.
T Consensus        10 iGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~   46 (326)
T PRK05442         10 TGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA   46 (326)
T ss_pred             ECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence            48889999999999988762       7888888653

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=90.70  E-value=1.2  Score=36.36  Aligned_cols=91  Identities=22%  Similarity=0.223  Sum_probs=57.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|++|.+|..+++.+...|.+|++++++. . ....        .+  -++.. ..|..+.+....+....++|.++++.
T Consensus       169 ~g~~g~ig~~~~~~a~~~G~~v~~~~~~~-~-~~~~--------~~--~g~~~-~~~~~~~~~~~~l~~~~~vd~vi~~~  235 (350)
T cd08248         169 LGGSGGVGTFAIQLLKAWGAHVTTTCSTD-A-IPLV--------KS--LGADD-VIDYNNEDFEEELTERGKFDVILDTV  235 (350)
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCcc-h-HHHH--------HH--hCCce-EEECCChhHHHHHHhcCCCCEEEECC
Confidence            47889999999999999999999888642 2 1100        00  11211 12333333333333334799999998


Q ss_pred             CCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           81 GREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      +..  .....++.++...++|.++..
T Consensus       236 g~~--~~~~~~~~l~~~G~~v~~g~~  259 (350)
T cd08248         236 GGD--TEKWALKLLKKGGTYVTLVSP  259 (350)
T ss_pred             ChH--HHHHHHHHhccCCEEEEecCC
Confidence            853  556667777766789988743

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.49  E-value=0.61  Score=37.12  Aligned_cols=27  Identities=19%  Similarity=0.391  Sum_probs=23.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR   27 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r   27 (249)
                      +|.+|.+|+.++..|++.|.+|+++.|
T Consensus       165 iG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        165 VGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             ECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            477888999999999999888888876

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=90.45  E-value=0.58  Score=40.11  Aligned_cols=30  Identities=20%  Similarity=0.380  Sum_probs=27.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |.|.+|..+++.|+++|++|++.+|++.+.
T Consensus         6 GLG~MG~~mA~nL~~~G~~V~v~drt~~~~   35 (467)
T TIGR00873         6 GLAVMGSNLALNMADHGFTVSVYNRTPEKT   35 (467)
T ss_pred             eeHHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence            578899999999999999999999988764

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=90.45  E-value=0.7  Score=40.36  Aligned_cols=85  Identities=14%  Similarity=0.108  Sum_probs=51.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++.+|.......  .          ..+++..        .+.++++  .+|+|+.+...
T Consensus       147 G~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~--~----------~~g~~~~--------~l~ell~--~aDiV~l~lP~  204 (526)
T PRK13581        147 GLGRIGSEVAKRAKAFGMKVIAYDPYISPERA--A----------QLGVELV--------SLDELLA--RADFITLHTPL  204 (526)
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEECCCCChhHH--H----------hcCCEEE--------cHHHHHh--hCCEEEEccCC
Confidence            56899999999999999999999986432110  0          0122221        3556666  78888876654


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeeccccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGVY  109 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v~  109 (249)
                      ...    .....++.++....||.+|-..+.
T Consensus       205 t~~t~~li~~~~l~~mk~ga~lIN~aRG~~v  235 (526)
T PRK13581        205 TPETRGLIGAEELAKMKPGVRIINCARGGII  235 (526)
T ss_pred             ChHhhcCcCHHHHhcCCCCeEEEECCCCcee
Confidence            321    113345555544566766655544

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=90.40  E-value=1.8  Score=38.36  Aligned_cols=61  Identities=20%  Similarity=0.188  Sum_probs=44.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |+|.+|+.++.++.+.|++|++++.++......+.             -+.+.+++.|.+.+.++.+  ++|+|..
T Consensus        29 GgGqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~A-------------D~~~v~~~~D~~~l~~~a~--~~dvIt~   89 (577)
T PLN02948         29 GGGQLGRMLCQAASQMGIKVKVLDPLEDCPASSVA-------------ARHVVGSFDDRAAVREFAK--RCDVLTV   89 (577)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC-------------ceeeeCCCCCHHHHHHHHH--HCCEEEE
Confidence            45799999999999999999999887653221111             1234578888888888877  6787754

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=90.34  E-value=1  Score=35.75  Aligned_cols=89  Identities=13%  Similarity=0.125  Sum_probs=52.5

Q ss_pred             cccchHHHHHHHHHcCCe-EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhCCCcEEEecCC
Q 025702            4 TRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      .|.+|...++.+...|.+ |+++++++.+... .        .+  -++..+ .|..+ .+.+.+.....++|+||++.+
T Consensus       129 ~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~-a--------~~--~Ga~~~-i~~~~~~~~~~~~~~~~g~d~vid~~G  196 (280)
T TIGR03366       129 AGMLGLTAAAAAAAAGAARVVAADPSPDRREL-A--------LS--FGATAL-AEPEVLAERQGGLQNGRGVDVALEFSG  196 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-H--------HH--cCCcEe-cCchhhHHHHHHHhCCCCCCEEEECCC
Confidence            488999999988888986 7777665544210 0        00  122211 12222 233333333347999999987


Q ss_pred             CChhhhHHHHHhCCCCCeEEEeec
Q 025702           82 READEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        82 ~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .. ......++.++...+++.++.
T Consensus       197 ~~-~~~~~~~~~l~~~G~iv~~G~  219 (280)
T TIGR03366       197 AT-AAVRACLESLDVGGTAVLAGS  219 (280)
T ss_pred             Ch-HHHHHHHHHhcCCCEEEEecc
Confidence            52 345556777775568887774

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=90.34  E-value=1.1  Score=35.76  Aligned_cols=91  Identities=21%  Similarity=0.261  Sum_probs=57.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi   77 (249)
                      .|++|.+|..+++.+...|.+|+++++++.+... +.        +  -++..+. +..+   .+.+.......++|.++
T Consensus       143 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vl  210 (320)
T cd05286         143 HAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL-AR--------A--AGADHVI-NYRDEDFVERVREITGGRGVDVVY  210 (320)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HH--------H--CCCCEEE-eCCchhHHHHHHHHcCCCCeeEEE
Confidence            3788999999999999999999998876654211 11        0  1221111 1122   22344444444799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++.+.  ......++.++...+++.++.
T Consensus       211 ~~~~~--~~~~~~~~~l~~~g~~v~~g~  236 (320)
T cd05286         211 DGVGK--DTFEGSLDSLRPRGTLVSFGN  236 (320)
T ss_pred             ECCCc--HhHHHHHHhhccCcEEEEEec
Confidence            98874  345556666775568887774

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=90.23  E-value=3.3  Score=32.02  Aligned_cols=104  Identities=11%  Similarity=0.085  Sum_probs=61.7

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCC--------------chhhhhccCc--eEEEEeccCCHHHH-
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGES--------------DQEFAEFSSK--ILHLKGDRKDYDFV-   64 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~--v~~~~~d~~d~~~l-   64 (249)
                      |.|-+|..+++.|...|. ++.+++.+.-.....-+...              ...+.+..+.  ++.+..++.+.+.+ 
T Consensus         6 G~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~~~~~~   85 (234)
T cd01484           6 GAGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGPEQDFN   85 (234)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCChhhhch
Confidence            467799999999999995 67777776544221111100              0122233444  44455566443332 


Q ss_pred             HHhhhhCCCcEEEecCCCChhhhHHHHHh-CC-CCCeEEEeecccccc
Q 025702           65 KSSLSAKGFDVVYDINGREADEVEPILDA-LP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        65 ~~~~~~~~~d~Vi~~~~~~~~~~~~~~~a-~~-~~~~~i~~Ss~~v~~  110 (249)
                      ...++  ++|+|+.+...  ...+..+.. |. ...++|..++.+-+|
T Consensus        86 ~~f~~--~~DvVi~a~Dn--~~aR~~ln~~c~~~~iplI~~g~~G~~G  129 (234)
T cd01484          86 DTFFE--QFHIIVNALDN--IIARRYVNGMLIFLIVPLIESGTEGFKG  129 (234)
T ss_pred             HHHHh--CCCEEEECCCC--HHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence            35666  89999987664  334444444 55 456888887766555

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=90.17  E-value=1.1  Score=35.82  Aligned_cols=92  Identities=22%  Similarity=0.209  Sum_probs=56.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceE-EEEeccCC-HHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL-HLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~d~~d-~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|-+|..++..+...|.+|++++++...... +.        .  -++. .+..+-.+ .+.+.......++|.+++
T Consensus       146 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~~--------~--~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~  214 (323)
T cd08241         146 LGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL-AR--------A--LGADHVIDYRDPDLRERVKALTGGRGVDVVYD  214 (323)
T ss_pred             EcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH-HH--------H--cCCceeeecCCccHHHHHHHHcCCCCcEEEEE
Confidence            4778999999999999999999999887654211 00        0  1111 11111111 234444444347999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +.+.  ......++.++...+++.++.
T Consensus       215 ~~g~--~~~~~~~~~~~~~g~~v~~~~  239 (323)
T cd08241         215 PVGG--DVFEASLRSLAWGGRLLVIGF  239 (323)
T ss_pred             CccH--HHHHHHHHhhccCCEEEEEcc
Confidence            8874  344556666665567887764

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	249
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-21
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	7e-21
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-20
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	6e-20
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-19
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	4e-19
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	6e-19
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	2e-17
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	2e-17
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	3e-17
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-17
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	4e-17
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	9e-17
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-16
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	9e-15
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	9e-15
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-13
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-13
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-13
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-13
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	4e-13
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	1e-12
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-12
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	3e-12
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	7e-12
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	8e-12
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	9e-12
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-11
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-11
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	7e-11
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	2e-10
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	9e-10
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	1e-09
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	2e-09
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-09
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	2e-09
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-09
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-09
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-09
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	5e-09
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	1e-08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-08
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	8e-08
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	4e-06
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	5e-05
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	7e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	8e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	6e-04

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 90.3 bits (225), Expect = 1e-21
 Identities = 48/271 (17%), Positives = 86/271 (31%), Gaps = 48/271 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT F+G ++   +  +G+   +       K                E+         D 
Sbjct: 9   GGTGFLGQYVVESIKNDGNTPIILTRSIGNK-----------AINDYEY------RVSDY 51

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LEQ--------FIYC 103
              D +         D V  +          I +   N        +          +Y 
Sbjct: 52  TLEDLIN---QLNDVDAVVHLAA-TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYA 107

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP- 157
           S+   Y     LP  E +   P   +   KL  E +       KG+   +LR  ++YG  
Sbjct: 108 STISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFN 167

Query: 158 LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              N +   FF +   G  + +  + +   +  + KD A++ +  L  EK S   FNI  
Sbjct: 168 EKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS-GTFNIGS 226

Query: 218 EKYVTFDGLARACAKVTGYCIAGSVEHRMPD 248
              +T   +A       G     ++  + P+
Sbjct: 227 GDALTNYEVANTINNAFGNKD--NLLVKNPN 255

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 88.9 bits (221), Expect = 7e-21
 Identities = 43/260 (16%), Positives = 72/260 (27%), Gaps = 43/260 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G   +R +   GH + L  R         P    Q  A    +      +  D+
Sbjct: 20  GATGLLGHHAARAIRAAGHDLVLIHR---------PSSQIQRLAYLEPEC--RVAEMLDH 68

Query: 62  DFVKSSLSAKGFDVVY------DINGREADEVEP--------ILDAL--PNLEQFIYCSS 105
             ++ +L  +G D V           R   E              A     + + +Y  S
Sbjct: 69  AGLERAL--RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126

Query: 106 AGVY-LKSDLLPHCETDTVDPKSRHKG-----KLNTES-VLE--SKGVNWTSLRPVYIYG 156
           A         LP  E    D     K      K   +    E    G+      P  + G
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLG 186

Query: 157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
            L+  P        +  G           V       +  R  +  L   +   + + ++
Sbjct: 187 ELDIGPTTGRVITAIGNGEMTHYVAGQRNVI---DAAEAGRGLLMALERGRIG-ERYLLT 242

Query: 217 GEKYVTFDGLARACAKVTGY 236
           G   +    L R  A++ G 
Sbjct: 243 GH-NLEMADLTRRIAELLGQ 261

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 84.4 bits (209), Expect = 5e-20
 Identities = 39/232 (16%), Positives = 68/232 (29%), Gaps = 41/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G + F+G  L    +  G +VT   R    I  +                L + K D   
Sbjct: 11  GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH-------------LKVKKADVSS 57

Query: 61  YDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNL---------EQFIYCSSAGV 108
            D V      KG D V    +      D  +  +     +          +F+    AG 
Sbjct: 58  LDEVCEVC--KGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGS 115

Query: 109 YLKSDLLPHCETDTVD----PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
              +  L   ++  V     P  +  G+     +++ K ++W    P     P       
Sbjct: 116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPG------ 169

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                       + +   G        V+D A A +  L + K  ++ F I 
Sbjct: 170 VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMIDELEHPKHHQERFTIG 218

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 86.1 bits (214), Expect = 6e-20
 Identities = 55/265 (20%), Positives = 88/265 (33%), Gaps = 38/265 (14%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G    IG  ++ LL++ G +V     F  G+    + L    +  F         ++G  
Sbjct: 28  GICGQIGSHIAELLLERGDKVVGIDNFATGR---REHLKDHPNLTF---------VEGSI 75

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------------EQFIYC 103
            D+  V   +     D V        D  +   D L N                 +F+Y 
Sbjct: 76  ADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYF 135

Query: 104 SSAGVY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVLESKGVNWTSLRPVYIYGPLNY 160
            +A  Y +K    P       +P +      K   E  LE  G+++ + R   + GP N 
Sbjct: 136 QTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVGPRNV 195

Query: 161 NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY 220
           +     FF RL  G+   +            VKDLARA V+ +  +      ++ S    
Sbjct: 196 SGPLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAV--DGVGHGAYHFSSGTD 250

Query: 221 VTFDGLARACAKVTGYCIAGSVEHR 245
           V    L  A  +          E R
Sbjct: 251 VAIKELYDAVVEAMALPSYPEPEIR 275

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 84.9 bits (210), Expect = 1e-19
 Identities = 34/238 (14%), Positives = 76/238 (31%), Gaps = 16/238 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F    + I+H  G   D+
Sbjct: 11  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH--GSIDDH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV   +   + +    I+ A+      +  + S  G           
Sbjct: 69  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN------DVDN 120

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                  KS  + K      +E++G+ +T +      G   +                + 
Sbjct: 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG--YFLRSLAQAGLTAPPRDKVV 178

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVTG 235
           I G G         +D+    ++ + + +   +   +      ++ + L     K   
Sbjct: 179 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 236

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 82.0 bits (202), Expect = 4e-19
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 29/222 (13%)

Query: 2   GGTRFIG-VFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I     + LL      +TL+ R                      ++  ++G  ++
Sbjct: 12  GAAGQIAQXLTATLLTYTDMHITLYGRQ--------LKTRIPPEIIDHERVTVIEGSFQN 63

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC 118
              ++ ++     +VV+        ++  I+ AL   N+ + I  S AG+  +  +    
Sbjct: 64  PGXLEQAV--TNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEK 121

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
            T    P S  +G+    +VL    +N+T LR  ++Y        E              
Sbjct: 122 WTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYEL-------IPEGAQ 174

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS---RQVFNISG 217
              + +        + + +A   +L     +   R    +  
Sbjct: 175 FNDAQV------SREAVVKAIFDILHAADETPFHRTSIGVGE 210

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 81.6 bits (201), Expect = 6e-19
 Identities = 39/232 (16%), Positives = 65/232 (28%), Gaps = 40/232 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +       GH+VT   R    I Q                I  L+ D  D 
Sbjct: 7   GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD------------INILQKDIFDL 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL---------EQFIYCSSAGV-YLK 111
                       +VV D  G   DE E  + +L +L          + +    A    + 
Sbjct: 55  T----LSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQID 110

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEW 166
            D     E+  +     +         LE         +WT + P  ++ P       E 
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP------GER 164

Query: 167 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
                     +     G        ++D A A +  +       + F ++G+
Sbjct: 165 TGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHLNEHFTVAGK 213

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 77.0 bits (190), Expect = 2e-17
 Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 44/229 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P       A        + GD    
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-----RPAHV------VVGDVLQA 58

Query: 62  DFVKSSLSAKGFDVVYDING--READEVEPILDALPNL---------EQFIYCSSAGVYL 110
             V  ++   G D V  + G   +      + +   N+         ++ + C+SA +  
Sbjct: 59  ADVDKTV--AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
               +P       D   R         VL   G+ + ++ P      +   P+       
Sbjct: 117 DPTKVPPRLQAVTDDHIR------MHKVLRESGLKYVAVMP----PHIGDQPLTG----A 162

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
                    P   I         DL    ++ L  ++        S + 
Sbjct: 163 YTVTLDGRGPSRVI------SKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 78.7 bits (195), Expect = 2e-17
 Identities = 46/263 (17%), Positives = 91/263 (34%), Gaps = 48/263 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L  E +++ +    + G     + +        A        +K D 
Sbjct: 8   GGAGFIGSHVVDKLS-ESNEIVVIDNLSSGNE---EFVNEA-----ARL------VKADL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
              D        KG + V+    + + R   E  P      N       LE        +
Sbjct: 53  AADDIKDY---LKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSR 108

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ S++ VY ++ ++P  E     P S +   KL  E+++     +  +     R   +
Sbjct: 109 IVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANV 168

Query: 155 YGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
            G    +  + ++     +    + I G+G Q     ++ D   A +  L  ++    +F
Sbjct: 169 IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERV-NIF 227

Query: 214 NISGEKYVTFDGLARACAKVTGY 236
           NI  E  +    +A    +  G 
Sbjct: 228 NIGSEDQIKVKRIAEIVCEELGL 250

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 78.9 bits (195), Expect = 3e-17
 Identities = 52/273 (19%), Positives = 84/273 (30%), Gaps = 51/273 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K   +V     F  G       L         +  S    ++GD 
Sbjct: 34  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR---NLDEVRSLVSEKQWSNFKFIQGDI 90

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           ++ D   ++    G D V            IN       +PI     N+           
Sbjct: 91  RNLDDCNNAC--AGVDYVLHQAALGSVPRSIN-------DPITSNATNIDGFLNMLIAAR 141

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTS 148
               + F Y +S+  Y     LP  E     P S +   K   E   +      G +   
Sbjct: 142 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 201

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++++  +A +   
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 261

Query: 204 -GNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
                A  QV+NI+     + + L  A      
Sbjct: 262 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLA 294

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 78.0 bits (192), Expect = 4e-17
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 19/240 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKD 60
           G T  IG  +    +K G+      R    I    P   ++    + S  ++ L+GD  D
Sbjct: 9   GPTGAIGRHIVWASIKAGNPTYALVR--KTITAANPETKEELIDNYQSLGVILLEGDIND 66

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVE-PILDALP--NLEQFIYCSSAGVYLKSDLLPH 117
           ++ +  ++  K  D+V    GR   E +  I+ A+      +  + S  G+         
Sbjct: 67  HETLVKAI--KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL-------DV 117

Query: 118 CETDTVDPKSR-HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
              D V+P  +  + K +   V+E++GV +T L      G   +                
Sbjct: 118 DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTG--YFLRNLAQLDATDPPRDK 175

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVTG 235
           + I G G          D+    ++   +     +  +I   K Y+T + +     K  G
Sbjct: 176 VVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG 235

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 78.1 bits (192), Expect = 4e-17
 Identities = 30/243 (12%), Positives = 75/243 (30%), Gaps = 21/243 (8%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R    ++     +    F +  +K++  +    D+
Sbjct: 11  GGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFKQLGAKLI--EASLDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-----PILDA---LPNLEQFIYCSSAGVYLKSD 113
             +  +L  K  DVV                  +++A     N+++F+            
Sbjct: 68  QRLVDAL--KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP---- 121

Query: 114 LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
                E            K      +E+  + +T +      G      + +   H +  
Sbjct: 122 --DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF-AGSLAQLDGHMMPP 178

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
              + I G G          D+    ++ + + +   +   I      ++   + +   +
Sbjct: 179 RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWER 238

Query: 233 VTG 235
           ++ 
Sbjct: 239 LSE 241

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 76.7 bits (189), Expect = 9e-17
 Identities = 48/247 (19%), Positives = 82/247 (33%), Gaps = 38/247 (15%)

Query: 3   GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG--------ESDQEFAEFSSKILHL 54
           G   +G+ L+R L  +GH+VT   R   P+   +          ++         +IL  
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVY 69

Query: 55  KGDRKDYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGVYLK 111
                        ++A +  D  Y ++  E   +   L AL    L+   + SS GVY +
Sbjct: 70  ------------CVAASEYSDEHYRLSYVEG--LRNTLSALEGAPLQHVFFVSSTGVYGQ 115

Query: 112 SDLLPHCETDTVDPKS-RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
                  E      K    K  L  E++L     + T LR   IYGP     +      +
Sbjct: 116 EVEEWLDEDTPPIAKDFSGKRMLEAEALLA--AYSSTILRFSGIYGPGRLRMIR-----Q 168

Query: 171 LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLAR 228
            +     P        T   H  D A     ++         +++ ++  + +    L R
Sbjct: 169 AQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLR 225

Query: 229 ACAKVTG 235
             A   G
Sbjct: 226 WLADRQG 232

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 75.7 bits (187), Expect = 3e-16
 Identities = 59/268 (22%), Positives = 96/268 (35%), Gaps = 50/268 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  L   LV+ G++V +    + G+    + +        AE          D 
Sbjct: 7   GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR---EFVNPS-----AEL------HVRDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           KDY +          DVV+    +   R +   EPI+    N       LE         
Sbjct: 53  KDYSWGA----GIKGDVVFHFAANPEVRLSTT-EPIVHFNENVVATFNVLEWARQTGVRT 107

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
            ++ SS+ VY  +D++P  E +   P S +   K   E +        GV   ++R   +
Sbjct: 108 VVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167

Query: 155 YGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVL---GNEKASR 210
            GP   + V   F  +L+     + + G G Q     +V+D   A +          A  
Sbjct: 168 VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227

Query: 211 QVFNISGEKYVTFDGLARACAKVTGYCI 238
              N+     V    +A+  A+V G   
Sbjct: 228 LALNVGNVDAVRVLDIAQIVAEVLGLRP 255

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 71.7 bits (175), Expect = 9e-15
 Identities = 50/276 (18%), Positives = 86/276 (31%), Gaps = 54/276 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGH-----QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           G T  IG  L+ +L          +V    R   P   +               I +++ 
Sbjct: 8   GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNP------------INYVQC 55

Query: 57  DRKDYDFVKSSLSAKG-----FDVVYDINGREADEVEP-------ILDAL----PNLEQF 100
           D  D D  ++ LS        F V +     E +  E        +LDA+    PNL+  
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHI 115

Query: 101 IYCSSAGVY---------LKSDLLPHCETDTVDPKSRHKGKLNT---ESVLESKGVNWTS 148
              +    Y         ++S   P+ E             L     E V + +G+ W+ 
Sbjct: 116 SLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSV 175

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKA------GRPIPIPGSGIQVTQLGHVKD---LARAF 199
            RP  I+G   Y+ +       + A      G+ +   G            D   +A   
Sbjct: 176 HRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235

Query: 200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           +    +  A  + FN+S      +    +  A+  G
Sbjct: 236 IWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFG 271

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 70.6 bits (173), Expect = 9e-15
 Identities = 41/222 (18%), Positives = 85/222 (38%), Gaps = 34/222 (15%)

Query: 2   GGTRFIGVFL-SRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G    I   + ++L  K+  + TLF R  A I +  P           +    + GD  +
Sbjct: 30  GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----------TNSQIIMGDVLN 78

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEP--ILDALP--NLEQFIYCSSAGVYLKSDLLP 116
           +  +K ++  +G D+VY     E  +++   ++ A+   ++++ I+  S G+Y +     
Sbjct: 79  HAALKQAM--QGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF 136

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
               + V      K        +E+ G+ +T LRP +    L    + ++        R 
Sbjct: 137 VEWNNAV-IGEPLKPFRRAADAIEASGLEYTILRPAW----LTDEDIIDYEL----TSRN 187

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISG 217
            P  G+ +        K +A     ++   EK   +   I+ 
Sbjct: 188 EPFKGTIV------SRKSVAALITDIIDKPEKHIGENIGINQ 223

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 68.4 bits (167), Expect = 1e-13
 Identities = 39/238 (16%), Positives = 88/238 (36%), Gaps = 18/238 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG F+ R  +   H   ++ R   P +     +  +EF      I  ++G+ +++
Sbjct: 11  GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI--IEGEMEEH 68

Query: 62  DFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDLLPH 117
           + + S L  K  D+V   +          I++A+    N+++F+         +   LP 
Sbjct: 69  EKMVSVL--KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLP- 125

Query: 118 CETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI 177
                   +S  + K      +E+  + +T +             +             I
Sbjct: 126 ------PFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPH--PNRNDDI 177

Query: 178 PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAKVT 234
            I G+G     L + +D+A+  ++V  + +   ++      K  ++ + L       +
Sbjct: 178 VIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKS 235

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 67.2 bits (164), Expect = 2e-13
 Identities = 41/257 (15%), Positives = 91/257 (35%), Gaps = 36/257 (14%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR---GKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GGT +IG  + +  +K GH   +FTR    K  +  +            S   + +KG+ 
Sbjct: 18  GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----------SLGAIIVKGEL 67

Query: 59  KDYDFVKSSLSAKGFDVVYD-INGREADEVEPILDAL---PNLEQFIYCSSAGVYLKSDL 114
            +++ +   +  K  DVV   +   +  +   IL+A+    N+++F+         + + 
Sbjct: 68  DEHEKLVELM--KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINA 125

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG 174
           LP         ++  + K      +E   + +T +                +        
Sbjct: 126 LPPF-------EALIERKRMIRRAIEEANIPYTYVSANCFASYF-----INYLLRPYDPK 173

Query: 175 RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYVTFDGLARACAK 232
             I + G+G     + + +D+    ++V  + +A  +  ++  S    +T   L     K
Sbjct: 174 DEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI-ITQLELISRWEK 232

Query: 233 VTGYCIAGSVEHRMPDD 249
             G        H   ++
Sbjct: 233 KIGKKF--KKIHVPEEE 247

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 67.0 bits (164), Expect = 3e-13
 Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 52/268 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +  IG  L   L ++  +  +       IA  +         +F      +  D  + 
Sbjct: 6   GSSGQIGTELVPYLAEKYGKKNV-------IASDIVQRDTGGI-KF------ITLDVSNR 51

Query: 62  DFVKSSLSAKGFDVVY------------------DINGREADEVEPILDAL--PNLEQFI 101
           D +  ++     D ++                   +N    +    IL+A     +E+ +
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVN---MNGTYNILEAAKQHRVEKVV 108

Query: 102 YCSSAGVYLKSDLLPHCETDTV-DPKSR-HKGKLNTESVLES----KGVNWTSLRPVYIY 155
             S+ GV+          + T+  P++     K+  E + +      G++  SLR   I 
Sbjct: 109 IPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168

Query: 156 GP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS- 209
                            F+            +  +   + ++ D  +A V +   ++   
Sbjct: 169 SYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228

Query: 210 --RQVFNISGEKYVTFDGLARACAKVTG 235
             R  +N++     T   L     +   
Sbjct: 229 VLRNGYNVTAYT-FTPSELYSKIKERIP 255

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 65.8 bits (161), Expect = 4e-13
 Identities = 28/232 (12%), Positives = 68/232 (29%), Gaps = 53/232 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +  +L   L  +GH+     R +     +L      +          +  + ++ 
Sbjct: 28  GANGKVARYLLSELKNKGHEPVAMVRNEEQ-GPELRERGASDI---------VVANLEE- 76

Query: 62  DFVKSSLSA--KGFDVVYDING--READEVEP----------ILDA--LPNLEQFIYCSS 105
                  S      D V    G        +            +       +++FI  SS
Sbjct: 77  -----DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131

Query: 106 AGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
            G     D  P      ++ +     K   +  L+   +++T +RP              
Sbjct: 132 VGTV-DPDQGP------MNMRHYLVAKRLADDELKRSSLDYTIVRPG------------- 171

Query: 166 WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
              +    G+ + +     ++T+     D+A+   +++  +    + F +  
Sbjct: 172 PLSNEESTGK-VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 66.9 bits (164), Expect = 4e-13
 Identities = 47/274 (17%), Positives = 86/274 (31%), Gaps = 51/274 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           G   FIG  L   L+K    V     F+ G       L         E  S+   ++GD 
Sbjct: 32  GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY---NLDEVKTLVSTEQWSRFCFIEGDI 88

Query: 59  KDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPNL----------- 97
           +D    +  +  KG D V            I        +PI     N+           
Sbjct: 89  RDLTTCEQVM--KGVDHVLHQAALGSVPRSIV-------DPITTNATNITGFLNILHAAK 139

Query: 98  ----EQFIYCSSAGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTS 148
               + F Y +S+  Y     LP  E +  +P S     ++  ++  +    + G     
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIG 199

Query: 149 LRPVYIYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           LR   ++G        Y  V   +   +  G  + I G G       ++ ++ +  +   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259

Query: 204 -GNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
              + A   ++N++     T + L+         
Sbjct: 260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNL 293

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 65.7 bits (161), Expect = 1e-12
 Identities = 52/273 (19%), Positives = 87/273 (31%), Gaps = 45/273 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG   +G  L    + +GH++ +   F  GK    + LP  +     E         G  
Sbjct: 27  GGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIE---------GSV 74

Query: 59  KDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-------LE--------QFIYC 103
            D   ++ +  +     V        D  +   DA  N        +        + +  
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134

Query: 104 SSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGP---LN 159
            +A  Y +   +P        P + +   K   E+ L    V   SLR   + GP   + 
Sbjct: 135 QTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIG 194

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
             P    F+ RLKAG+          V     + D        L   + +  VFN+ +GE
Sbjct: 195 PIPT---FYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSLQEGRPTG-VFNVSTGE 247

Query: 219 KYVTFDGLARACAKVTGYCIAGSVEH--RMPDD 249
            +   + +        G  +A  V       DD
Sbjct: 248 GHSIKE-VFDVVLDYVGATLAEPVPVVAPGADD 279

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 64.3 bits (157), Expect = 1e-12
 Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 50/231 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T  +G  L + L    +Q+    R K     Q                  +K    D 
Sbjct: 7   GSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQYNN---------------VKAVHFDV 50

Query: 62  DFVKSSLSA--KGFDVVYDINGREADEVEPI-LDALPNL---------EQFIYCSSAGVY 109
           D+    ++    G D + +++G     +  + L     L         ++FI  S+    
Sbjct: 51  DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS- 109

Query: 110 LKSDLLPHCETDTVDPKSRHKGKLNTESVL-ESKGVNWTSLRPVYIYGPLNYNPVEEWFF 168
           L+ +       D +     +  K   +  L +   +++T ++P  +              
Sbjct: 110 LQPEKWIGAGFDALKD--YYIAKHFADLYLTKETNLDYTIIQPGALTE------------ 155

Query: 169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGE 218
                     +     +V+    + D+A    +++  + +  +V ++ +G+
Sbjct: 156 -----EEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK 201

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 64.1 bits (156), Expect = 3e-12
 Identities = 37/250 (14%), Positives = 74/250 (29%), Gaps = 40/250 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +             +G   +
Sbjct: 12  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLF---------QGPLLN 62

Query: 61  YDFVKSSLSA--KGFDVVYDI-NGREADEVE---PILDA---LPNLEQFIYCSSAGVYLK 111
                  +    +G  + +     +  DE+     + DA      ++ +IY S       
Sbjct: 63  ---NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS------- 112

Query: 112 SDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
              +P        P       K   E+ +   G+  T +            P   +    
Sbjct: 113 ---MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMEL 169

Query: 171 LKAGR---PIPIPGSGIQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDG 225
           +  G      P       +  L    D+  A +Q+  +  +K +     ++ E  ++   
Sbjct: 170 MPDGTFEWHAPFDPDI-PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLSPVQ 227

Query: 226 LARACAKVTG 235
           +  A ++   
Sbjct: 228 VCAAFSRALN 237

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 63.1 bits (154), Expect = 7e-12
 Identities = 50/288 (17%), Positives = 87/288 (30%), Gaps = 73/288 (25%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG 56
           GG  F+G  L + L++ G +QV     L +  K  +        D     F       + 
Sbjct: 39  GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRF------SET 85

Query: 57  DRKDYDFVKSSLSAKGFDVVYDINGREADEV-------EPILDALPN-------LEQ--- 99
              D   + S      +D V+      A          +P+ D   N        E+   
Sbjct: 86  SITDDALLASLQ--DEYDYVF----HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139

Query: 100 ------FIYCSSAGVYLKSDLLPHCETDTVDPKSRHK-------GKLNTESVL----ESK 142
                  +Y ++     +        T+  D  S H         K+  E       +  
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199

Query: 143 GVNWTSLRPVYIYGPLNYNPVEEW--------------FFHRLKAGRPIPIPGSGIQVTQ 188
            +     R   +YGP        W              F ++   G P+P+   G+    
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259

Query: 189 LGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
              V+D+A   +     +     V+NI+  K  +   LA    ++TG 
Sbjct: 260 FIFVEDVANGLIACA-ADGTPGGVYNIASGKETSIADLATKINEITGN 306

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 62.9 bits (154), Expect = 8e-12
 Identities = 63/287 (21%), Positives = 101/287 (35%), Gaps = 58/287 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  FIG  +   L+  G +V +      GK    + +P         F       + D 
Sbjct: 7   GGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKG-----VPF------FRVDL 52

Query: 59  KDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPN-------LE--------Q 99
           +D + V+ +        V       + + + E +P+LD   N       LE        +
Sbjct: 53  RDKEGVERAFREFRPTHVSHQAAQASVKVSVE-DPVLDFEVNLLGGLNLLEACRQYGVEK 111

Query: 100 FIYCSSAG-VY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPV 152
            ++ S+ G +Y    +     ET    PKS +   K   E  L       G+ W SLR  
Sbjct: 112 LVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYG 171

Query: 153 YIYGPLNYNPVEE-----WFFHRLKAGRPIPI-----PGSGIQVTQLGHVKDLARAFVQV 202
            +YGP   +P  E      F  R+  G P+ +     PG    V    +V D+A A    
Sbjct: 172 NVYGP-RQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
           L    +   ++N+   +  T   +  A A+  G           P D
Sbjct: 231 L---FSLEGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGD 274

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 61.6 bits (149), Expect = 9e-12
 Identities = 28/233 (12%), Positives = 55/233 (23%), Gaps = 42/233 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  +     + GH+V    R     A    G +                 ++  
Sbjct: 7   GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-DRLGATVAT------------LVKEPL 53

Query: 62  DFVKSSLSAKGFDVVYDING---------READEVEPILDAL--PNLEQFIYCSSAGVYL 110
              ++ L     D V D               D    ++  L   +        SA + +
Sbjct: 54  VLTEADL--DSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAM 111

Query: 111 KSDLLPHCETDTVDPKSR------HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
                P          S+             + +  +  VNW  + P   +         
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS------G 165

Query: 165 EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG 217
               +       +        +       ++A A +  L +  A R    +  
Sbjct: 166 PATSYVAGKDTLLVGEDGQSHI----TTGNMALAILDQLEHPTAIRDRIVVRD 214

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 61.8 bits (150), Expect = 1e-11
 Identities = 35/270 (12%), Positives = 68/270 (25%), Gaps = 65/270 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  + + L +           R  A   +++ GE+D              GD  
Sbjct: 11  GASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKIGGEADV-----------FIGDIT 58

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP------------------------ 95
           D D +  +   +G D +  +                                        
Sbjct: 59  DADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 96  -------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTS 148
                   ++  +   S G       L       +        K   E  L   G  +T 
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNI-----LVWKRKAEQYLADSGTPYTI 171

Query: 149 LRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
           +R   +                L  G+   +  +  +        D+A   +Q L  E+A
Sbjct: 172 IRAGGLLDKEGG-------VRELLVGKDDELLQTDTKTV---PRADVAEVCIQALLFEEA 221

Query: 209 SRQVFNISGEKYVT---FDGLARACAKVTG 235
             + F++  +   T           ++VT 
Sbjct: 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTS 251

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 62.4 bits (151), Expect = 1e-11
 Identities = 36/246 (14%), Positives = 79/246 (32%), Gaps = 26/246 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T FIG F++   +       +  R           +  +   +  + I  + G   + 
Sbjct: 17  GATGFIGQFVATASLDAHRPTYILARPGPRSPS--KAKIFKALEDKGAII--VYGLINEQ 72

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPNLEQFIYCSSAGV---YLKSDLLPH 117
           + ++  L     D+V    G E+   +  ++ A           + G    +L S+    
Sbjct: 73  EAMEKILKEHEIDIVVSTVGGESILDQIALVKA---------MKAVGTIKRFLPSEF--G 121

Query: 118 CETDTVDPKSR----HKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA 173
            + +  DP       ++ K     ++E  G+ +T +    I     YN +       L  
Sbjct: 122 HDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH--PSEVLPP 179

Query: 174 GRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK-YVTFDGLARACAK 232
                I G G          D+ +  ++ + + +   +  +       +  + LA    K
Sbjct: 180 TDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEK 239

Query: 233 VTGYCI 238
             G  +
Sbjct: 240 KIGRTL 245

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 52/314 (16%), Positives = 89/314 (28%), Gaps = 89/314 (28%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQL----PGESDQEFAEFSSKILH- 53
           GG  + G   +  L K+ ++V +     R        L    P  S  +       +   
Sbjct: 18  GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK 77

Query: 54  ----LKGDRKDYDFVKSSLSAKGFDVV----------YDINGREADEVEPILDALPN--- 96
                 GD  D++F+  S  +   D V          Y +  R       +     N   
Sbjct: 78  SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS----RAVYTQHNNVIG 133

Query: 97  ----LE---------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL---- 139
               L            +   + G Y      P+ + +       H G+ +T        
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGT----PNIDIEEGYITITHNGRTDTLPYPKQAS 189

Query: 140 ----ESK--------------GVNWTSLRPVYIYGP--------------LNYNPVEEW- 166
                SK              G+  T L    +YG               L+Y+ V    
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249

Query: 167 ---FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ--VFNISGEKYV 221
              F  +   G P+ + G G Q      ++D  +     + N   + +  VFN   E++ 
Sbjct: 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 309

Query: 222 TFDGLARACAKVTG 235
             + LA    K   
Sbjct: 310 VNE-LASLVTKAGS 322

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 58.7 bits (142), Expect = 2e-10
 Identities = 42/217 (19%), Positives = 69/217 (31%), Gaps = 29/217 (13%)

Query: 6   FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK 65
           +    LSR L  +G ++   +R           +  +      ++ L   G+    D V 
Sbjct: 15  YTARVLSRALAPQGWRIIGTSRNP---------DQMEAIRASGAEPLLWPGEEPSLDGVT 65

Query: 66  SSLSA----KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             L +     G D V    G +      I           Y S+  VY   D     ET 
Sbjct: 66  HLLISTAPDSGGDPVLAALGDQ------IAARAAQFRWVGYLSTTAVYGDHDGAWVDETT 119

Query: 122 TVDPKS-RHKGKLN-TESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
            + P + R + ++   +       +     R   IYGP    P       +L  G    I
Sbjct: 120 PLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGP-GRGPFS-----KLGKGGIRRI 173

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                QV    HV+D+A+     +        V+N+ 
Sbjct: 174 IK-PGQVFSRIHVEDIAQVLAASMARPDPGA-VYNVC 208

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 57.0 bits (138), Expect = 9e-10
 Identities = 48/287 (16%), Positives = 89/287 (31%), Gaps = 57/287 (19%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G   FI   ++R L  EGH V     +    + + +      EF            D + 
Sbjct: 36  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF---CDEF---------HLVDLRV 83

Query: 61  YDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNL---------------EQFI 101
            +        +G D V+    D+ G    +    +    N                ++F 
Sbjct: 84  MENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF 141

Query: 102 YCSSAGVYLKSDLLPHCETDT-------VDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
           Y SSA +Y +   L               +P+      KL TE +     +  G+     
Sbjct: 142 YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 201

Query: 150 RPVYIYGP-LNYNPVEEW----FFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL 203
           R   IYGP   +    E     F  +   +     + G G+Q      + +     +++ 
Sbjct: 202 RFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261

Query: 204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHR-MPDD 249
             +   R+  NI  ++ V+ + +A              + H   P+ 
Sbjct: 262 --KSDFREPVNIGSDEMVSMNEMAEMVLSFEEK--KLPIHHIPGPEG 304

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 32/187 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV----YLKSDL 114
           DY+  +S   A  G   +  I+G   D    I+     ++       AGV    Y     
Sbjct: 53  DYNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKA---ARDAGVKHIAYT-G-- 106

Query: 115 LPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLK 172
               E   +     H     TE  + +  + +T LR         Y    V E      +
Sbjct: 107 YAFAEESIIPLAHVHLA---TEYAIRTTNIPYTFLRNAL------YTDFFVNEGLRASTE 157

Query: 173 AGRPIPIPGSG----IQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLAR 228
           +G  +   GSG    +         +LA A   VL  E    + +N+   +  TFD LA+
Sbjct: 158 SGAIVTNAGSGIVNSV------TRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQ 211

Query: 229 ACAKVTG 235
             ++V+G
Sbjct: 212 ILSEVSG 218

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 33/253 (13%), Positives = 73/253 (28%), Gaps = 54/253 (21%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           G    IG  L++ L K  G +  +     +    +    P                   +
Sbjct: 9   GACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGP---------------FEVVN 53

Query: 58  RKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNL---------------EQ 99
             D++ ++  +       +Y    +    A E  P      N+               ++
Sbjct: 54  ALDFNQIEHLVEVHKITDIYLMAALLSATA-EKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVD-PKSRHKG--KLNTESVLESK----GVNWTSLRPV 152
             + SS  V+  +    +    T+  P + + G  K   E   E      GV+  S+R  
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIMEPSTVY-GISKQAGERWCEYYHNIYGVDVRSIRYP 171

Query: 153 YIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL---G 204
            +                  F++  A +      S      + ++ D   A + ++    
Sbjct: 172 GLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231

Query: 205 NEKASRQVFNISG 217
            +      +N++ 
Sbjct: 232 EKIKIHSSYNLAA 244

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 40/296 (13%), Positives = 74/296 (25%), Gaps = 68/296 (22%)

Query: 2   GGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL 54
           G    +G  L++ LVK+G        + TL    +        G       +        
Sbjct: 21  GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-----VDA------R 69

Query: 55  KGDRKDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLE------------- 98
             D       +  L     DV++    I   EA E++       NL+             
Sbjct: 70  AADLSAPGEAEK-LVEARPDVIFHLAAIVSGEA-ELDFDKGYRINLDGTRYLFDAIRIAN 127

Query: 99  -------QFIYCSSAGVYLKSDLLPHCETDTVDPKS---RHKGKLNTESVLES----KGV 144
                  + ++ SS  V+      P  +     P +     K     E +L         
Sbjct: 128 GKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQK--AICELLLSDYSRRGFF 185

Query: 145 NWTSLRPVYIYGPL--------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
           +   +R   I             +             G+   +P            +   
Sbjct: 186 DGIGIRLPTICIRPGKPNAAASGFFSN---ILREPLVGQEAVLPVPESIRHWHASPRSAV 242

Query: 197 RAFVQVL---GNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
              +        +   R+  ++ G    T      A  KV G      +    P++
Sbjct: 243 GFLIHGAMIDVEKVGPRRNLSMPGLSA-TVGEQIEALRKVAGEKAVALIRRE-PNE 296

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 45/293 (15%), Positives = 83/293 (28%), Gaps = 78/293 (26%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  L+R LV  G +VT    L      P                      L+  
Sbjct: 14  GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKP 58

Query: 58  RKDYDFVKSSLSAKGFDVVY--------------------DING--------READEVEP 89
               +  +  L      +VY                    +++                 
Sbjct: 59  V--LELEERDL--SDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSV----- 109

Query: 90  ILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES-----KG 143
                  + + +  S+  VY ++D LP  E   + P+S +   K+  E V  +       
Sbjct: 110 ------GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA 163

Query: 144 VNWTSLRPVYIYGP-LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
                +R   +YGP    + +       L     +P+ G G Q     ++ D+    V +
Sbjct: 164 PEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI-------AGSVEHRMPD 248
               +    V N    + ++ + + R     +              +     D
Sbjct: 224 A--NRPLPSVVNFGSGQSLSVNDVIRILQATSPAAEVARKQPRPNEITEFRAD 274

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 46/287 (16%), Positives = 95/287 (33%), Gaps = 57/287 (19%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTL---FTRGKAPIAQQLPGESD-QEFAEFSSKILHLK 55
           GG  F+G  L+    +     +V +   F         +       +    F  +++   
Sbjct: 17  GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI--A 74

Query: 56  GDRKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE------------- 98
            D  +   ++  L    FD ++      +    +     L    N +             
Sbjct: 75  ADINNPLDLRR-LEKLHFDYLFHQAAVSDTTMLN---QELVMKTNYQAFLNLLEIARSKK 130

Query: 99  -QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKG--KLNTESVL--ESKGVNWTSLRPVY 153
            + IY SSAGVY  +   P+       P++ + G  KL  +  +   S       LR  Y
Sbjct: 131 AKVIYASSAGVYGNTK-APNVVGKNESPENVY-GFSKLCMDEFVLSHSNDNVQVGLR--Y 186

Query: 154 --IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQ----VTQLGHVKDLARAFVQV 202
             +YGP          +         A + + +   G Q    V    +++D+ +A V+ 
Sbjct: 187 FNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV----YIEDVIQANVKA 242

Query: 203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
           +  +K+   V+N+   +  +++ +     +  G         + P  
Sbjct: 243 MKAQKS--GVYNVGYSQARSYNEIVSILKEHLGD--FKVTYIKNPYA 285

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 35/231 (15%), Positives = 74/231 (32%), Gaps = 37/231 (16%)

Query: 11  LSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA 70
            ++ +        +  R    +     G+      +             DY   +S + A
Sbjct: 17  TNQAIANHIDHFHIGVRNVEKVPDDWRGKV--SVRQL------------DYFNQESMVEA 62

Query: 71  -KGFDVVYDINGREADEVEPILDALPNLEQFIY-CSSAGV----YLKSDLLPHCETDTVD 124
            KG D V  I              +P +E  +Y    +GV    ++        + +   
Sbjct: 63  FKGMDTVVFIPSIIHPSF----KRIPEVENLVYAAKQSGVAHIIFI-G--YYADQHNNPF 115

Query: 125 PKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI 184
             S + G      +L + G+++T +R         Y    + +   L     +  P    
Sbjct: 116 HMSPYFGY--ASRLLSTSGIDYTYVRMAM------YMDPLKPYLPELMNMHKLIYPAGDG 167

Query: 185 QVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG 235
           ++       D+AR  + ++ N     + + +SG  Y     LA   ++ +G
Sbjct: 168 RIN-YITRNDIARGVIAIIKNPDTWGKRYLLSGYSY-DMKELAAILSEASG 216

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 47/285 (16%), Positives = 79/285 (27%), Gaps = 60/285 (21%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  FIG  + + L  +G   + +      G                 + +      K D
Sbjct: 6   GGAGFIGSNIVKALNDKGITDILVVDNLKDG----------TKFVNLVDLNIADYMDKED 55

Query: 58  RKDYDFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------Q 99
                           + ++      +  E D  + ++D   N +               
Sbjct: 56  FLIQIMAGEEF--GDVEAIFHEGACSSTTEWDG-KYMMDN--NYQYSKELLHYCLEREIP 110

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 111 FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNV 170

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQV---TQLGHVKDLARAFVQVLGN 205
           YGP      +   V      +L  G  P    GS           +V D+A   +  L  
Sbjct: 171 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV---YVGDVADVNLWFL-- 225

Query: 206 EKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHR-MPDD 249
           E     +FN+   +  +F  +A A          G +E+   PD 
Sbjct: 226 ENGVSGIFNLGTGRAESFQAVADATLAYHK---KGQIEYIPFPDK 267

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 54.3 bits (131), Expect = 5e-09
 Identities = 49/256 (19%), Positives = 87/256 (33%), Gaps = 55/256 (21%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTR-GKAPIAQQL--PGESDQEFAEFSSKILHLKGD 57
           GGT   G  ++R L+++G  +V + TR  +   A++L   G      AE       ++GD
Sbjct: 12  GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG------AEV------VQGD 59

Query: 58  RKDYDFVKSSLSAKGFDVVYDI-----NGREADEVE---PILDA--LPNLEQFIYCSSAG 107
           + D   ++ +L   G    + +     +  +  EV+    + D      L   +Y     
Sbjct: 60  QDDQVIMELAL--NGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLEN 117

Query: 108 VYLKSD---LLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVE 164
           +   +       H +           GK   E      GV  TS+R    +     N + 
Sbjct: 118 IKKLTAGRLAAAHFD-----------GKGEVEEYFRDIGVPMTSVRLPCYF----ENLLS 162

Query: 165 EWFFHRLKAGR----PIPIPGSGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEK 219
            +   +   G+     +P     +       V DL    + +L   EK   Q   +S   
Sbjct: 163 HFLPQKAPDGKSYLLSLPTGDVPM---DGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTC- 218

Query: 220 YVTFDGLARACAKVTG 235
             T +  A    K T 
Sbjct: 219 RHTAEEYAALLTKHTR 234

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 34/166 (20%), Positives = 51/166 (30%), Gaps = 25/166 (15%)

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPK-----SRHKGKLNTESVLESKGVNWTSLRPVYI 154
           F+Y SSA  Y           +   P      S+         +L          R   +
Sbjct: 158 FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNV 217

Query: 155 YGP-----LNYNPVEEWFFHRLKAG-RPIPIPGSGIQ----VTQLGHVKDLARAFVQVLG 204
           YGP      +   V      +L  G  P    GS       V    +V D+A   +  L 
Sbjct: 218 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV----YVGDVADVNLWFL- 272

Query: 205 NEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHR-MPDD 249
            E     +FN+   +  +F  +A A          G +E+   PD 
Sbjct: 273 -ENGVSGIFNLGTGRAESFQAVADATLAYHK---KGQIEYIPFPDK 314

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 32/218 (14%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F  K+       +
Sbjct: 25  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE-KLDDYASAFQ 83

Query: 60  DYDFV-------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYLK 111
            +D         +    A+GF  V  D   + A+  +         + F   SS G    
Sbjct: 84  GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-----GCKHFNLLSSKGADKS 138

Query: 112 SDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL 171
           S+ L            + KG++    V E K   ++  RP  +      +   EW   + 
Sbjct: 139 SNFLY----------LQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF 187

Query: 172 KAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
                +P   +         V  + RA +  +   +  
Sbjct: 188 --FGSLPDSWASGHSV---PVVTVVRAMLNNVVRPRDK 220

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 33/186 (17%)

Query: 60  DYDFVKSSLSA-KGFDVVYDIN----GREADEVEPILDALPNLEQFIYCSSAGV----YL 110
           DY    +  SA +G + +  I+    G+ A +   +++A           +AGV    Y 
Sbjct: 52  DYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINA---------AKAAGVKFIAYT 102

Query: 111 KSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHR 170
            S  L H +T  +     H     TE +L   G+ +T LR  +      Y+         
Sbjct: 103 -S--LLHADTSPLGLADEHIE---TEKMLADSGIVYTLLRNGW------YSENYLASAPA 150

Query: 171 LKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                      G G          D A A  +V+       +V+ ++G+   T   LA  
Sbjct: 151 ALEHGVFIGAAGDG--KIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAE 208

Query: 230 CAKVTG 235
             K +G
Sbjct: 209 LTKQSG 214

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 50.4 bits (121), Expect = 8e-08
 Identities = 41/230 (17%), Positives = 63/230 (27%), Gaps = 56/230 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G T   G  L   ++ E    +V    R       +L                       
Sbjct: 12  GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQL-------DG 64

Query: 60  DYDFV--------KSSLSAKGFDVV-YDINGREADEVEPILDALPNLEQFIYCSSAGVYL 110
             D          K + S + F  V +D+                    ++  S+ G   
Sbjct: 65  SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK-----RALEMGARHYLVVSALGA-- 117

Query: 111 KSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEE 165
                        D KS     R KG+L  +++ E      T  RP  ++GP       E
Sbjct: 118 -------------DAKSSIFYNRVKGELE-QALQEQGWPQLTIARPSLLFGP------RE 157

Query: 166 WFFHRLKAGRPI--PIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
            F        PI   +PG    +       DLARA  ++   E    +  
Sbjct: 158 EFRLAEILAAPIARILPGKYHGI----EACDLARALWRLALEEGKGVRFV 203

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 46.1 bits (109), Expect = 4e-06
 Identities = 42/252 (16%), Positives = 70/252 (27%), Gaps = 53/252 (21%)

Query: 2   GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK---ILHLKGD 57
           G   F+G  L   L     H +    R             ++E      K   I+HL G 
Sbjct: 7   GAKGFVGKNLKADLTSTTDHHIFEVHRQ----------TKEEELESALLKADFIVHLAGV 56

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDAL--PNLEQFIYCSSAGVYLKSDLL 115
                        +        N      ++ +LD L     +  I  SS+         
Sbjct: 57  N----------RPEHDKEFSLGN---VSYLDHVLDILTRNTKKPAILLSSSIQA------ 97

Query: 116 PHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP---LNYNPVEEWF 167
                      + + + KL  E +L    E  G      R   ++G     NYN V   F
Sbjct: 98  --------TQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATF 149

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL-GNEKASRQVFNISGEKYVTFDGL 226
            +++     I +         L +V D+     + + G       V  +     VT   +
Sbjct: 150 CYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI 208

Query: 227 ARACAKVTGYCI 238
                K     +
Sbjct: 209 VDLLYKFKQSRL 220

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 30/212 (14%), Positives = 51/212 (24%), Gaps = 46/212 (21%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L    H+V L           +   + +   E       +  D  D 
Sbjct: 9   GAAGGVGSAIRPHLGTLAHEVRLSDI--------VDLGAAEAHEEI------VACDLADA 54

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVE-PILDALPN--------LE--------QFIYCS 104
             V   +  K  D +  +       VE P  D L           E        + ++ S
Sbjct: 55  QAVHDLV--KDCDGIIHL---GGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109

Query: 105 SAGVY-LKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGP- 157
           S                    P S +   K   E +         +   ++R    +   
Sbjct: 110 SNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP 169

Query: 158 LNYNPVEEW---FFHRLKAGRPIPIPGSGIQV 186
            +   +  W           R    P  G  V
Sbjct: 170 KDARMMATWLSVDDFMRLMKRAFVAPKLGCTV 201

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 10/74 (13%)

Query: 154 IYGPLNYNPVEE----WFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG 204
           +YG   +   ++    WF  +         +P  I G+G QV  + H +D+   +   L 
Sbjct: 195 MYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALA 254

Query: 205 NEKASR-QVFNISG 217
           N    R   FNI G
Sbjct: 255 NVSKIRGNAFNIGG 268

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 31/264 (11%), Positives = 59/264 (22%), Gaps = 64/264 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  +   L      + L            P +      E       ++ D  D 
Sbjct: 10  GAAGQLGRVMRERLAPMAEILRLADLS--------PLDPAGPNEEC------VQCDLADA 55

Query: 62  DFVKSSLSAKGFDVVY-----DINGREADEVEP-------ILDA--LPNLEQFIYCSSAG 107
           + V + +   G D +       +       ++        + +A       + ++ SS  
Sbjct: 56  NAVNAMV--AGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH 113

Query: 108 VY-LKSDLLPHCETDTVDPKSRHKG--KLNTESVL----ESKGVNWTSLRPVYIYG-PLN 159
                             P   + G  K   E++     +  G     +R       P N
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLY-GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN 172

Query: 160 YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK 219
           Y  +  WF H                        D       V         V   +   
Sbjct: 173 YRMLSTWFSHD-----------------------DFVSLIEAVFRAPVLGCPVVWGASAN 209

Query: 220 YVTFDGLARACAKVTGYCIAGSVE 243
                    +     G+    + E
Sbjct: 210 --DAGWWDNSHLGFLGWKPKDNAE 231

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL--PGESDQEFAEFSSKILHLKG 56
           G    +G  L+  L   GH+V    R +    ++   P     +  + +  ++HL G
Sbjct: 154 GSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAG 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	249
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.98
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.98
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.98
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.97
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.96
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.96
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.95
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.95
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.95
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.95
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.95
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.95
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.91
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.87
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.86
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.86
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.84
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.83
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.82
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.82
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.81
1spx_A	278	Short-chain reductase family member (5L265); paral	99.81
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.81
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.81
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.81
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.8
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.8
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.8
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.8
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.8
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.79
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.79
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.78
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.78
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.78
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.78
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.78
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.78
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.78
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.78
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.78
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.77
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.77
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.77
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.77
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.77
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.77
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.77
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.77
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.77
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.77
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.77
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.77
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.77
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.76
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.76
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.76
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.76
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.76
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.76
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.76
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.76
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.76
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.76
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.76
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.76
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.76
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.76
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.76
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.76
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.76
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.75
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.75
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.75
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.75
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.75
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.75
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.75
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.75
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.74
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.74
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.74
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.74
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.74
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.74
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.74
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.74
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.74
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.74
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.74
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.74
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.74
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.74
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.74
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.74
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.74
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.73
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.73
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.73
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.73
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.73
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.73
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.73
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.73
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.73
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.73
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.73
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.73
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.73
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.73
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.73
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.73
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.73
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.72
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.72
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.72
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.72
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.72
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.72
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.72
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.72
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.72
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.72
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.72
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.72
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.72
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.71
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.71
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.71
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.71
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.71
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.71
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.71
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.71
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.71
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.71
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.71
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.71
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.71
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.71
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.71
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.71
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.7
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.7
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.7
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.7
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.7
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.7
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.7
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.7
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.7
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.7
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.7
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.69
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.69
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.69
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.68
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.68
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.68
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.68
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.68
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.68
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.68
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.68
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.67
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.67
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.67
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.67
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.66
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.66
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.66
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.66
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.66
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.65
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.65
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.65
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.65
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.65
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.65
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.65
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.65
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.64
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.64
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.64
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.63
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.63
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.63
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.63
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.62
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.62
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.62
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.62
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.62
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.61
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.61
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.6
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.6
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.58
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.57
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.57
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.57
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.57
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.57
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.57
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.57
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.57
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.57
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.56
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.56
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.56
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.56
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.53
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.53
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.51
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.48
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.48
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.44
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.43
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.38
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.37
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.36
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.34
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.33
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.24
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.13
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.11
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.08
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.96
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.91
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.86
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.86
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.83
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.78
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.76
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.76
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.76
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.69
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.54
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.28
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.21
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.2
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.13
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.08
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.06
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.02
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.89
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.87
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.85
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.81
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.77
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.7
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.64
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.62
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.58
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.57
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.56
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.55
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.4
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.34
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.25
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.24
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.22
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.14
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.03
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.02
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.95
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.92
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.84
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.81
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.81
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.79
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.78
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.76
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.63
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.62
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.62
1lnq_A	336	MTHK channels, potassium channel related protein;	96.6
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.59
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.57
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.55
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.5
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.49
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.46
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.39
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.33
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.32
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.31
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.31
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.29
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.18
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.97
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.96
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	95.94
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	95.89
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.88
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	95.86
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.78
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	95.67
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.65
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	95.57
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.54
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	95.5
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.48
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.45
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	95.35
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.23
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	95.21
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.2
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.18
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	95.18
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	95.16
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.14
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.14
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	95.13
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.12
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.12
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	95.06
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	95.05
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.02
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	94.97
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	94.97
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.96
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.93
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	94.9
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	94.88
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	94.88
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	94.83
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	94.83
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	94.79
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	94.79
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	94.79
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.78
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	94.76
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	94.74
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	94.74
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	94.72
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	94.71
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.62
3qha_A	296	Putative oxidoreductase; seattle structural genomi	94.59
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	94.47
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	94.47
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	94.46
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	94.44
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	94.43
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.43
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	94.42
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.38
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	94.36
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	94.33
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	94.31
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	94.3
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	94.29
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	94.28
2duw_A	145	Putative COA-binding protein; ligand binding prote	94.26
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	94.25
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	94.23
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	94.19
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	94.17
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	94.13
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	94.09
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	94.07
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.05
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	94.03
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	94.02
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	94.01
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	93.99
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	93.97
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	93.94
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	93.93
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	93.87
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	93.87
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	93.85
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	93.79
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	93.78
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	93.75
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	93.75
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	93.73
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	93.65
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	93.63
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	93.6
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	93.6
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	93.59
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	93.57
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	93.57
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	93.57
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	93.51
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	93.49
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	93.45
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	93.43
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	93.38
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	93.37
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	93.36
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	93.34
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	93.31
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	93.31
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	93.31
4ezb_A	317	Uncharacterized conserved protein; structural geno	93.29
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	93.25
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	93.23
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	93.23
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	93.22
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	93.18
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	93.16
2o4c_A	380	Erythronate-4-phosphate dehydrogenase; erythronate	93.15
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	93.14
3oet_A	381	Erythronate-4-phosphate dehydrogenase; structural	93.13
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	93.13
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	93.12
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	93.11
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	93.07
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	93.03
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	93.01
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	92.95
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	92.94
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	92.94
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	92.87
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	92.8
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	92.74
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	92.73
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	92.72
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	92.7
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	92.67
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	92.66

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.7e-37  Score=248.70  Aligned_cols=220  Identities=21%  Similarity=0.283  Sum_probs=193.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++|+++|+++|++|++++|++.. .. +            .+++++.+|+. .+.+.++++  ++|+|||++
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~------------~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a   70 (311)
T 3m2p_A            8 TGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-I------------NDYEYRVSDYT-LEDLINQLN--DVDAVVHLA   70 (311)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCC-HHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-C------------CceEEEEcccc-HHHHHHhhc--CCCEEEEcc
Confidence            7999999999999999999999999999333 11 1            37899999999 999999998  999999998


Q ss_pred             CCC------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh----
Q 025702           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----  141 (249)
Q Consensus        81 ~~~------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~----  141 (249)
                      +..            ..++.+++++++  ++++|||+||..+|+.....+++|+.+..|.+.| .+|..+|.+++.    
T Consensus        71 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  150 (311)
T 3m2p_A           71 ATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK  150 (311)
T ss_dssp             CCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            862            346788999987  7889999999999998877889999999998888 999999998854    


Q ss_pred             cCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcc
Q 025702          142 KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (249)
Q Consensus       142 ~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (249)
                      .+++++++||+++|||+... .++..++..+..+.++.+++++...++++|++|+|++++.+++++. .+++||+++++.
T Consensus       151 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~  229 (311)
T 3m2p_A          151 KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDA  229 (311)
T ss_dssp             SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCE
T ss_pred             cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCc
Confidence            68999999999999997543 5778888888899998888888899999999999999999999876 678999999999


Q ss_pred             ccHHHHHHHHHHHhCCCc
Q 025702          221 VTFDGLARACAKVTGYCI  238 (249)
Q Consensus       221 ~s~~~l~~~~~~~~g~~~  238 (249)
                      +|+.|+++.+++.+|.+.
T Consensus       230 ~s~~e~~~~i~~~~g~~~  247 (311)
T 3m2p_A          230 LTNYEVANTINNAFGNKD  247 (311)
T ss_dssp             ECHHHHHHHHHHHTTCTT
T ss_pred             ccHHHHHHHHHHHhCCCC
Confidence            999999999999999654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=1.6e-37  Score=252.75  Aligned_cols=229  Identities=19%  Similarity=0.216  Sum_probs=196.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-----ccCceEEEEeccCCHHHHHHhhhhCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~d~~d~~~l~~~~~~~~~d~   75 (249)
                      ||||||||++|+++|+++|++|++++|.+........     .+..     ...+++++.+|+.|.+.+.++++  ++|+
T Consensus        31 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~  103 (351)
T 3ruf_A           31 TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLD-----EVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--GVDH  103 (351)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHH-----HHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--TCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhh-----hhhhccccccCCceEEEEccCCCHHHHHHHhc--CCCE
Confidence            7999999999999999999999999998765221100     0000     01689999999999999999998  9999


Q ss_pred             EEecCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHH
Q 025702           76 VYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        76 Vi~~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (249)
                      |||+++..                +.++.+++++++  ++++|||+||..+|+.....+++|+.+..|.+.| .+|..+|
T Consensus       104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  183 (351)
T 3ruf_A          104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNE  183 (351)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHH
Confidence            99999862                345778999987  7889999999999998888899999999999988 9999999


Q ss_pred             HHHh----hcCCcEEEeecceeeCCCCCc-----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC-C
Q 025702          137 SVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN-E  206 (249)
Q Consensus       137 ~~~~----~~~~~~~~~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~-~  206 (249)
                      .+++    +.+++++++||+++|||+...     .+++.++..+..+.++.+++++.+.++++|++|+|++++.++.+ +
T Consensus       184 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~  263 (351)
T 3ruf_A          184 IYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKD  263 (351)
T ss_dssp             HHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc
Confidence            8875    458999999999999997532     56778888888898888888889999999999999999999988 3


Q ss_pred             CCCCceEEecCCccccHHHHHHHHHHHhCC
Q 025702          207 KASRQVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      ...+++||+++++.+|+.|+++.+.+.+|.
T Consensus       264 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  293 (351)
T 3ruf_A          264 SAKDNIYNVAVGDRTTLNELSGYIYDELNL  293 (351)
T ss_dssp             GGCSEEEEESCSCCEEHHHHHHHHHHHHHT
T ss_pred             ccCCCEEEeCCCCcccHHHHHHHHHHHhCc
Confidence            456889999999999999999999999996

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-36  Score=247.50  Aligned_cols=236  Identities=17%  Similarity=0.231  Sum_probs=198.0

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      ||||||||++|+++|+++|  ++|++++|...... ..+..      ....++++++.+|++|.+.+.++++..++|+||
T Consensus        30 tGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi  103 (346)
T 4egb_A           30 TGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKS------IQDHPNYYFVKGEIQNGELLEHVIKERDVQVIV  103 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTT------TTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEE
T ss_pred             ECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhh------hccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999999  78888888753311 11110      001258999999999999999999855699999


Q ss_pred             ecCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCC-CCCCCCCCCCCCCCCcc-cchHHHHH
Q 025702           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        78 ~~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (249)
                      |+|+..                +.++.+++++++  ++++|||+||..+|+.. ...+++|+.+..|.+.| .+|..+|.
T Consensus       104 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  183 (346)
T 4egb_A          104 NFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADM  183 (346)
T ss_dssp             ECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHH
Confidence            999852                235788999977  78899999999999976 45688999999999888 99999999


Q ss_pred             HHhh----cCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCce
Q 025702          138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (249)
Q Consensus       138 ~~~~----~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (249)
                      +++.    .+++++++||+++|||+.. ..+++.++..+..+.++.+++++...++++|++|+|++++.+++++. .+++
T Consensus       184 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~  262 (346)
T 4egb_A          184 IALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-VGEV  262 (346)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-CCCE
Confidence            8754    6899999999999999754 35677888888899888888888999999999999999999998876 6789


Q ss_pred             EEecCCccccHHHHHHHHHHHhCCCcccccc
Q 025702          213 FNISGEKYVTFDGLARACAKVTGYCIAGSVE  243 (249)
Q Consensus       213 ~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~~  243 (249)
                      ||+++++.+|+.|+++.+.+.+|.+.+.+.+
T Consensus       263 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  293 (346)
T 4egb_A          263 YNIGGNNEKTNVEVVEQIITLLGKTKKDIEY  293 (346)
T ss_dssp             EEECCSCCEEHHHHHHHHHHHHTCCGGGCEE
T ss_pred             EEECCCCceeHHHHHHHHHHHhCCCcccccc
Confidence            9999999999999999999999976654443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.1e-37  Score=253.02  Aligned_cols=224  Identities=19%  Similarity=0.276  Sum_probs=192.8

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccC-CHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~-d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||||++|+++|+++ |++|++++|++........          ..+++++.+|++ |.+.+.++++  ++|+|||
T Consensus        30 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih   97 (372)
T 3slg_A           30 LGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----------HERMHFFEGDITINKEWVEYHVK--KCDVILP   97 (372)
T ss_dssp             ESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----------STTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----------CCCeEEEeCccCCCHHHHHHHhc--cCCEEEE
Confidence            799999999999999998 9999999998765332211          368999999999 9999999998  9999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCC-------CCCCcc-cch
Q 025702           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (249)
                      +|+..                +.++.+++++++  + ++|||+||..+||.....++.|+..+       .|.+.| .+|
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK  176 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK  176 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence            99863                345688999987  7 89999999999998877778777754       455567 999


Q ss_pred             HHHHHHHhhc---CCcEEEeecceeeCCCCC---------cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          133 LNTESVLESK---GVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       133 ~~~e~~~~~~---~~~~~~~r~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      ..+|.+++..   +++++++||+++|||+..         ..++..++..+..+.++.+++++.+.++++|++|+|++++
T Consensus       177 ~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  256 (372)
T 3slg_A          177 QLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM  256 (372)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence            9999998765   899999999999999743         3467788888889999888888889999999999999999


Q ss_pred             HHhcCCC--CCCceEEecCC-ccccHHHHHHHHHHHhCCC
Q 025702          201 QVLGNEK--ASRQVFNISGE-KYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~-~~~s~~~l~~~~~~~~g~~  237 (249)
                      .+++++.  ..+++||++++ +.+|+.|+++.+.+.+|.+
T Consensus       257 ~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~  296 (372)
T 3slg_A          257 KIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF  296 (372)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHC
T ss_pred             HHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCC
Confidence            9999875  46889999994 8999999999999999864

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=8.8e-37  Score=244.58  Aligned_cols=223  Identities=23%  Similarity=0.279  Sum_probs=188.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++|++|++++|.+.......           ..+++++.+|+.|.+ +.+.++  + |+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A   70 (312)
T 3ko8_A            6 TGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----------NPSAELHVRDLKDYS-WGAGIK--G-DVVFHFA   70 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----------CTTSEEECCCTTSTT-TTTTCC--C-SEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----------CCCceEEECccccHH-HHhhcC--C-CEEEECC
Confidence            799999999999999999999999999876643222           257899999999998 888887  5 9999999


Q ss_pred             CC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +.                |+.++.+++++++  ++++|||+||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  150 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCAT  150 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            84                2345778999877  7889999999999999888889999998999988 999999988743


Q ss_pred             ----cCCcEEEeecceeeCCCCCcchHHHHHHHHHcC-CCeeecCCCcceEeeeeHHHHHHHHHHHhcC---CCCCCceE
Q 025702          142 ----KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVF  213 (249)
Q Consensus       142 ----~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~  213 (249)
                          .+++++++||+++|||+.....+..++..+..+ ..+...+++.+.++++|++|+|++++.++++   +...+++|
T Consensus       151 ~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  230 (312)
T 3ko8_A          151 YARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL  230 (312)
T ss_dssp             HHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             HHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence                589999999999999987667777777777666 4566778888999999999999999999987   44467899


Q ss_pred             EecCCccccHHHHHHHHHHHhCCCc
Q 025702          214 NISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       214 ~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      |+++++.+|+.|+++.+.+.+|.+.
T Consensus       231 ni~~~~~~s~~e~~~~i~~~~g~~~  255 (312)
T 3ko8_A          231 NVGNVDAVRVLDIAQIVAEVLGLRP  255 (312)
T ss_dssp             EESCSSCEEHHHHHHHHHHHHTCCC
T ss_pred             EEcCCCceeHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999653

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=7e-37  Score=248.64  Aligned_cols=221  Identities=21%  Similarity=0.289  Sum_probs=193.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++|++|++++|++..                 .+++++.+|+.|.+.+.++++  ++|+|||++
T Consensus        25 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A   85 (347)
T 4id9_A           25 TGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDAIM--GVSAVLHLG   85 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHHHh--CCCEEEECC
Confidence            7999999999999999999999999998754                 367889999999999999998  999999999


Q ss_pred             CCC--------------hhhhHHHHHhCC--CCCeEEEeeccccccC--CCCCCCCCCCCCCCCCcc-cchHHHHHHHh-
Q 025702           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLK--SDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (249)
Q Consensus        81 ~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~--~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (249)
                      +..              +.++.++++++.  ++++|||+||..+||.  ....++.|+.+..|.+.| .+|..+|.+++ 
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  165 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRF  165 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            862              345788999977  7889999999999998  567788999998898888 99999999874 


Q ss_pred             ---hcCCcEEEeecceee-------------CCCCC------------cchHHHHHHHHHcCCCeeecCCCcceEee---
Q 025702          141 ---SKGVNWTSLRPVYIY-------------GPLNY------------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL---  189 (249)
Q Consensus       141 ---~~~~~~~~~r~~~v~-------------g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  189 (249)
                         +.+++++++||+++|             ||+..            ..++..++.....+.++.+++++...+++   
T Consensus       166 ~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  245 (347)
T 4id9_A          166 HQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMH  245 (347)
T ss_dssp             HHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEEC
T ss_pred             HHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccC
Confidence               468999999999999             77532            35566777788888887777888888888   


Q ss_pred             -eeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCCccc
Q 025702          190 -GHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAG  240 (249)
Q Consensus       190 -i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~  240 (249)
                       +|++|+|++++.+++++...+++||+++++.+|+.|+++.+.+.+|.+.+.
T Consensus       246 ~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  297 (347)
T 4id9_A          246 ITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVT  297 (347)
T ss_dssp             EEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEE
T ss_pred             cEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCce
Confidence             999999999999999985568899999999999999999999999976444

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=5.6e-36  Score=240.02  Aligned_cols=221  Identities=21%  Similarity=0.285  Sum_probs=187.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++| .++++++.........           ..+++++.+|+.| +.+.++++  ++|+|||++
T Consensus         7 TGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a   71 (313)
T 3ehe_A            7 TGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----------NEAARLVKADLAA-DDIKDYLK--GAEEVWHIA   71 (313)
T ss_dssp             ETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----------CTTEEEECCCTTT-SCCHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----------CCCcEEEECcCCh-HHHHHHhc--CCCEEEECC
Confidence            7999999999999999999 5555655444322222           2578999999999 88999998  999999998


Q ss_pred             CC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-
Q 025702           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (249)
                      +.                |+.++.+++++++  ++++||++||..+||.....+++|+.+..|.+.| .+|..+|.+++ 
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  151 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIES  151 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            84                2346778899876  7889999999999998888889999888888888 99999998874 


Q ss_pred             ---hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcC-CCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEec
Q 025702          141 ---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS  216 (249)
Q Consensus       141 ---~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~  216 (249)
                         +.+++++++||+++|||+.....+..++..+..+ ..+..++++.+.++++|++|+|++++.+++.. ..+++||++
T Consensus       152 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~ni~  230 (313)
T 3ehe_A          152 YCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-ERVNIFNIG  230 (313)
T ss_dssp             HHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-SSEEEEECC
T ss_pred             HHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-CCCceEEEC
Confidence               4689999999999999987667777777777666 56677888889999999999999999999844 357899999


Q ss_pred             CCccccHHHHHHHHHHHhCCC
Q 025702          217 GEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       217 ~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      +++.+|+.|+++.+.+.+|.+
T Consensus       231 ~~~~~s~~e~~~~i~~~~g~~  251 (313)
T 3ehe_A          231 SEDQIKVKRIAEIVCEELGLS  251 (313)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCC
T ss_pred             CCCCeeHHHHHHHHHHHhCCC
Confidence            999999999999999999965

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.2e-35  Score=242.69  Aligned_cols=229  Identities=18%  Similarity=0.207  Sum_probs=189.1

Q ss_pred             CCCcccchHHHHHHHHH--cCCeEEEEecCCCcccc--CCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVK--EGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~--~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~   75 (249)
                      |||+||||++|+++|++  .|++|++++|+......  ...............+++++.+|++|.+.+.++ ..  ++|+
T Consensus        16 TGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~D~   93 (362)
T 3sxp_A           16 TGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL--HFDY   93 (362)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS--CCSE
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc--CCCE
Confidence            79999999999999999  89999999997762110  000000001111135789999999999999988 55  9999


Q ss_pred             EEecCCCC--------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHH
Q 025702           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (249)
Q Consensus        76 Vi~~~~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (249)
                      |||+|+..              +.++.+++++++  +++ ||++||..+||.... +++|+.+..|.+.| .+|..+|.+
T Consensus        94 vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~E~~  171 (362)
T 3sxp_A           94 LFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEF  171 (362)
T ss_dssp             EEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             EEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHH
Confidence            99999852              346788999987  554 999999999998766 89999999999988 999999999


Q ss_pred             HhhcC--CcEEEeecceeeCCCCCc-----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCc
Q 025702          139 LESKG--VNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (249)
Q Consensus       139 ~~~~~--~~~~~~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (249)
                      ++...  ++++++||+++|||+...     .++..++..+..+.++.+++++.+.++++|++|+|++++.+++.+. .| 
T Consensus       172 ~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-~g-  249 (362)
T 3sxp_A          172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-SG-  249 (362)
T ss_dssp             HHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-CE-
T ss_pred             HHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-CC-
Confidence            87654  789999999999998542     5677888888888888887888889999999999999999999875 45 


Q ss_pred             eEEecCCccccHHHHHHHHHHHhC
Q 025702          212 VFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +||+++++.+|+.|+++.+.+.+|
T Consensus       250 ~~~i~~~~~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          250 VYNVGYSQARSYNEIVSILKEHLG  273 (362)
T ss_dssp             EEEESCSCEEEHHHHHHHHHHHHC
T ss_pred             EEEeCCCCCccHHHHHHHHHHHcC
Confidence            999999999999999999999999

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3e-35  Score=238.48  Aligned_cols=234  Identities=18%  Similarity=0.223  Sum_probs=189.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+||||++++++|+++|++|++++|+........     ..+. ....+++++.+|++|.+.+.++++..++|+|||+
T Consensus        11 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (341)
T 3enk_A           11 TGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAI-----ARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF   85 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHH-----HHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHH-----HHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence            799999999999999999999999999876532110     0111 1135789999999999999999987789999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh
Q 025702           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~  140 (249)
                      |+..                ..++.+++++++  +.++||++||..+||.....+++|+.+..|.+.| .+|..+|.+++
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~  165 (341)
T 3enk_A           86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILR  165 (341)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHH
T ss_pred             ccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9863                335778888876  6789999999999998888889999998898888 99999999875


Q ss_pred             h----c-CCcEEEeecceeeCCCC-----------CcchHHHHHHHHHcC-CCeeecC------CCcceEeeeeHHHHHH
Q 025702          141 S----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLKAG-RPIPIPG------SGIQVTQLGHVKDLAR  197 (249)
Q Consensus       141 ~----~-~~~~~~~r~~~v~g~~~-----------~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a~  197 (249)
                      .    . +++++++||+++|||+.           ...+++.+....... ..+.+++      ++.+.++++|++|+|+
T Consensus       166 ~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~  245 (341)
T 3enk_A          166 DVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLAR  245 (341)
T ss_dssp             HHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred             HHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHH
Confidence            4    2 49999999999999853           133444444433332 4566656      7788999999999999


Q ss_pred             HHHHHhcC--CCCCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          198 AFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      +++.++++  +...+++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       246 a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  289 (341)
T 3enk_A          246 GHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVP  289 (341)
T ss_dssp             HHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence            99999987  2345789999999999999999999999997644

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=3.2e-35  Score=235.47  Aligned_cols=225  Identities=23%  Similarity=0.259  Sum_probs=186.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++++++|+++|++|++++|........+           ..+++++.+|++|.+.+.++++..++|+|||++
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a   74 (311)
T 2p5y_A            6 TGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----------PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQA   74 (311)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-----------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-----------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence            799999999999999999999999998644322111           146788999999999999988766899999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeecc-ccccC-CCCCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSA-GVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~-~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      +..                ..++.++++++.  ++++||++||. .+||. ....+.+|+.+..|.+.| .+|..+|.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL  154 (311)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence            863                234677888876  67899999998 89986 555677888887788888 9999999987


Q ss_pred             h----hcCCcEEEeecceeeCCCCC----cchHHHHHHHHHcCCCeeec-----CCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          140 E----SKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLKAGRPIPIP-----GSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       140 ~----~~~~~~~~~r~~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                      +    +.+++++++||+++|||+..    ..+++.++..+.++.++.++     +++.+.++++|++|+|++++.+++++
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence            4    35899999999999999753    23566677777778777766     77788899999999999999999864


Q ss_pred             CCCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          207 KASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                         +++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       235 ---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  264 (311)
T 2p5y_A          235 ---EGIYNVGTGEGHTTREVLMAVAEAAGKAPE  264 (311)
T ss_dssp             ---CEEEEESCSCCEEHHHHHHHHHHHHTCCCC
T ss_pred             ---CCEEEeCCCCCccHHHHHHHHHHHhCCCCC
Confidence               689999999999999999999999996543

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=6e-35  Score=235.65  Aligned_cols=228  Identities=19%  Similarity=0.287  Sum_probs=185.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++++++|+++|++|++++|........+           ..+++++.+|+.|.+.+.++++..++|+|||++
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            7 CGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----------TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-----------CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc-----------CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            799999999999999999999999999765432211           137889999999999999999766899999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +..                ..++.+++++++  ++++||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHH
Confidence            863                235678888876  6789999999999998777788999888888888 999999998754


Q ss_pred             ----cCCcEEEeecceeeCCCC----------CcchHHHHHHHHHc-CCCeeecC------CCcceEeeeeHHHHHHHHH
Q 025702          142 ----KGVNWTSLRPVYIYGPLN----------YNPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       142 ----~~~~~~~~r~~~v~g~~~----------~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~~D~a~~~~  200 (249)
                          .+++++++||+++|||+.          ...+++.+...... +..+.+++      ++...++++|++|+|++++
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~  235 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF  235 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHH
T ss_pred             HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHH
Confidence                489999999999999862          12345555544433 33455555      5678899999999999999


Q ss_pred             HHhcCCCC--CCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          201 QVLGNEKA--SRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       201 ~~~~~~~~--~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      .+++++..  .+++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       236 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  276 (330)
T 2c20_A          236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIP  276 (330)
T ss_dssp             HHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCC
T ss_pred             HHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCc
Confidence            99986432  3689999999999999999999999997544

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=8.2e-35  Score=236.91  Aligned_cols=236  Identities=20%  Similarity=0.204  Sum_probs=192.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      ||||||||++++++|+++|++|++++|++......+.. ....+. ....+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~  109 (352)
T 1sb8_A           33 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDE-VRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQ  109 (352)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHH-HHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHH-HhhhcccccCCceEEEECCCCCHHHHHHHhc--CCCEEEEC
Confidence            79999999999999999999999999976531110000 000000 002578999999999999999998  99999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh
Q 025702           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~  140 (249)
                      ++..                ..++.++++++.  ++++||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++
T Consensus       110 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  189 (352)
T 1sb8_A          110 AALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYAD  189 (352)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHH
T ss_pred             CcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            9853                235678888876  7889999999999998777788899888888888 99999999874


Q ss_pred             ----hcCCcEEEeecceeeCCCCCc-----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC-CCCC
Q 025702          141 ----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-KASR  210 (249)
Q Consensus       141 ----~~~~~~~~~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~  210 (249)
                          +.+++++++||+++|||+...     .+++.++..+..+.++.+++++...++++|++|+|++++.++... ...+
T Consensus       190 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~  269 (352)
T 1sb8_A          190 VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARN  269 (352)
T ss_dssp             HHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCS
T ss_pred             HHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCC
Confidence                358999999999999997532     456677777778888777788888999999999999999999873 3467


Q ss_pred             ceEEecCCccccHHHHHHHHHHHh---CCCcc
Q 025702          211 QVFNISGEKYVTFDGLARACAKVT---GYCIA  239 (249)
Q Consensus       211 ~~~~i~~~~~~s~~~l~~~~~~~~---g~~~~  239 (249)
                      ++||+++++.+|+.|+++.+.+.+   |.+.+
T Consensus       270 ~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          270 QVYNIAVGGRTSLNQLFFALRDGLAENGVSYH  301 (352)
T ss_dssp             EEEEESCSCCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred             ceEEeCCCCCccHHHHHHHHHHHHHhcCCCCC
Confidence            899999999999999999999999   86543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=9.9e-35  Score=233.53  Aligned_cols=222  Identities=18%  Similarity=0.189  Sum_probs=186.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++++++|+++|++|++++|++.. ..              -+++++.+|++|.+.+.++++..++|+|||+|
T Consensus        18 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           18 TGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------PNVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            7999999999999999999999999998654 11              16888999999999999999854599999999


Q ss_pred             CCC----------------hhhhHHHHHhCC---CCCeEEEeeccccccCC--CCCCCCCCCCCCCCCcc-cchHHHHHH
Q 025702           81 GRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKS--DLLPHCETDTVDPKSRH-KGKLNTESV  138 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~--~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (249)
                      +..                +.++.+++++++   +.++||++||..+|+..  ...+++|+.+..|.+.| .+|..+|.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  162 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGML  162 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHH
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence            863                234677888876   48899999999999876  56788898888888888 999999998


Q ss_pred             Hhh----cCCcEEEeecceeeCCCCCc-chHHHHHHHHHc---C--CCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          139 LES----KGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKA---G--RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       139 ~~~----~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      ++.    .+++++++||+++|||+... ..++.++..+..   +  .++...+++...++++|++|+|++++.+++++. 
T Consensus       163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-  241 (321)
T 2pk3_A          163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGK-  241 (321)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCC-
Confidence            754    38999999999999998643 355566666555   6  466667778888999999999999999998763 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          209 SRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       209 ~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      .+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       242 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  271 (321)
T 2pk3_A          242 TGDVYNVCSGIGTRIQDVLDLLLAMANVKI  271 (321)
T ss_dssp             TTCEEEESCSCEEEHHHHHHHHHHHSSSCC
T ss_pred             CCCeEEeCCCCCeeHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=2.1e-35  Score=233.87  Aligned_cols=212  Identities=21%  Similarity=0.196  Sum_probs=181.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      || +||+|++|+++|+++|++|++++|++...               ..+++++.+|+.|.+.+.++++. ++|+|||++
T Consensus         9 tG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a   71 (286)
T 3gpi_A            9 AG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDTLASIVHL-RPEILVYCV   71 (286)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGGCTTGGGG-CCSEEEECH
T ss_pred             EC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHHHHHhhcC-CCCEEEEeC
Confidence            68 59999999999999999999999987652               25789999999999999999882 499999998


Q ss_pred             CC-----------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhcCCcE
Q 025702           81 GR-----------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNW  146 (249)
Q Consensus        81 ~~-----------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~  146 (249)
                      +.           +..++.+++++++  ++++|||+||..+||.....+++|+.+..|.+.| .+|..+|.+ ++. +++
T Consensus        72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~  149 (286)
T 3gpi_A           72 AASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSS  149 (286)
T ss_dssp             HHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCe
Confidence            64           4567999999987  7889999999999998888888999999999999 999999999 777 999


Q ss_pred             EEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccccHH
Q 025702          147 TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVTFD  224 (249)
Q Consensus       147 ~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~  224 (249)
                      +++||+++|||+..     .++..+.+ ..  ..+++...++++|++|+|++++.+++++  ...+++||+++++.+|+.
T Consensus       150 ~ilR~~~v~G~~~~-----~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  221 (286)
T 3gpi_A          150 TILRFSGIYGPGRL-----RMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVH  221 (286)
T ss_dssp             EEEEECEEEBTTBC-----HHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHH
T ss_pred             EEEecccccCCCch-----hHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHH
Confidence            99999999999743     23344434 22  2366778899999999999999999884  446889999999999999


Q ss_pred             HHHHHHHHHhCCCcc
Q 025702          225 GLARACAKVTGYCIA  239 (249)
Q Consensus       225 ~l~~~~~~~~g~~~~  239 (249)
                      |+++.+.+.+|.+.+
T Consensus       222 e~~~~i~~~~g~~~~  236 (286)
T 3gpi_A          222 DLLRWLADRQGIAYP  236 (286)
T ss_dssp             HHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHcCCCCC
Confidence            999999999997544

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=7.8e-35  Score=239.09  Aligned_cols=225  Identities=19%  Similarity=0.266  Sum_probs=180.2

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      ||||||||++++++|+++| ++|++++|++......+..         ..+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus        38 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~---------~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~  106 (377)
T 2q1s_A           38 VGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD---------HPAVRFSETSITDDALLASLQD--EYDYVFHL  106 (377)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCC---------CTTEEEECSCTTCHHHHHHCCS--CCSEEEEC
T ss_pred             ECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccC---------CCceEEEECCCCCHHHHHHHhh--CCCEEEEC
Confidence            7999999999999999999 9999999987653222210         2578999999999999999998  99999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC---CCCeEEEeeccccccCCCCCCCC--CCC---CC-CCCCcc-cchH
Q 025702           80 NGRE----------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC--ETD---TV-DPKSRH-KGKL  133 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~--e~~---~~-~~~~~~-~~k~  133 (249)
                      ++..                +.++.++++++.   ++++||++||..+||.....+++  |+.   +. .|.+.| .+|.
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~  186 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKI  186 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHH
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHH
Confidence            9863                235788899876   36799999999999976666677  776   55 677778 9999


Q ss_pred             HHHHHHhh----cCCcEEEeecceeeCCCC---------C-----cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          134 NTESVLES----KGVNWTSLRPVYIYGPLN---------Y-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       134 ~~e~~~~~----~~~~~~~~r~~~v~g~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      .+|.+++.    .+++++++||+++|||+.         .     ..+++.++..+.++.++.+++++...++++|++|+
T Consensus       187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  266 (377)
T 2q1s_A          187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV  266 (377)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHH
Confidence            99998753    489999999999999976         3     35677788888888887777888889999999999


Q ss_pred             HHH-HHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          196 ARA-FVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       196 a~~-~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      |++ ++.+++++. .+ +||+++++.+|+.|+++.+.+.+|.+.
T Consensus       267 a~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~  308 (377)
T 2q1s_A          267 ANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNT  308 (377)
T ss_dssp             HHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCC
Confidence            999 999998865 56 999999999999999999999999653

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.2e-34  Score=233.04  Aligned_cols=230  Identities=20%  Similarity=0.321  Sum_probs=190.7

Q ss_pred             CCCcccchHHHHHHHHHc---C---CeEEEEecCCCcc-ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKE---G---HQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~---g---~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~   73 (249)
                      ||||||||++++++|+++   |   ++|++++|..... ...+.     .+. ...+++++.+|++|.+.+.+++.  ++
T Consensus         6 TGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~-----~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~   77 (337)
T 1r6d_A            6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA-----PVD-ADPRLRFVHGDIRDAGLLARELR--GV   77 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG-----GGT-TCTTEEEEECCTTCHHHHHHHTT--TC
T ss_pred             ECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh-----hcc-cCCCeEEEEcCCCCHHHHHHHhc--CC
Confidence            799999999999999997   8   9999999975321 11110     000 02578999999999999999997  99


Q ss_pred             cEEEecCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHH
Q 025702           74 DVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (249)
Q Consensus        74 d~Vi~~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (249)
                      |+|||+++..                ..++.++++++.  ++++||++||..+||.....+++|+.+..|.+.| .+|..
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  157 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHH
Confidence            9999999853                235778888876  6789999999999997666678888888888888 99999


Q ss_pred             HHHHHh----hcCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          135 TESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       135 ~e~~~~----~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      +|.+++    +.+++++++||+++|||+.. ..+++.++..+..+.++.+++++.+.++++|++|+|++++.+++++. .
T Consensus       158 ~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~  236 (337)
T 1r6d_A          158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A  236 (337)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-C
Confidence            999874    35899999999999999754 35566777777788888777888889999999999999999998754 5


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          210 RQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       210 ~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      +++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~  266 (337)
T 1r6d_A          237 GEIYHIGGGLELTNRELTGILLDSLGADWS  266 (337)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHTCCGG
T ss_pred             CCEEEeCCCCCccHHHHHHHHHHHhCCCcc
Confidence            789999999999999999999999997644

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1.3e-34  Score=234.91  Aligned_cols=226  Identities=19%  Similarity=0.238  Sum_probs=184.7

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||||++++++|+++ |++|++++|++........          ..+++++.+|+.| .+.+.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih   73 (345)
T 2bll_A            6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (345)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc----------CCCeEEEeccccCcHHHHHhhcc--CCCEEEE
Confidence            799999999999999998 8999999998765322211          2578999999998 467888888  8999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCC-------CCCCcc-cch
Q 025702           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (249)
                      +++..                ..++.++++++.  + ++||++||..+|+.....+++|+.+.       .|.+.| .+|
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK  152 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  152 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHH
Confidence            98853                224677888876  5 89999999999998766667777643       233357 899


Q ss_pred             HHHHHHHh----hcCCcEEEeecceeeCCCCC---------cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       133 ~~~e~~~~----~~~~~~~~~r~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      ..+|.+++    +.+++++++||+++|||+..         ...+..++..+..+.++.+++++.+.++++|++|+|+++
T Consensus       153 ~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  232 (345)
T 2bll_A          153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHH
Confidence            99999874    45899999999999999753         235667777788888887778888899999999999999


Q ss_pred             HHHhcCCC--CCCceEEecCCc-cccHHHHHHHHHHHhCCCcc
Q 025702          200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~-~~s~~~l~~~~~~~~g~~~~  239 (249)
                      +.+++++.  ..+++||+++++ .+|+.|+++.+.+.+|.+.+
T Consensus       233 ~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~  275 (345)
T 2bll_A          233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL  275 (345)
T ss_dssp             HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred             HHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcc
Confidence            99998764  357899999986 89999999999999986544

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-34  Score=231.68  Aligned_cols=228  Identities=18%  Similarity=0.160  Sum_probs=186.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++++++|+++|++|++++|++.....       ..+..  ...+++++.+|+.|.+.+.++++..++|+|||
T Consensus        20 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih   92 (335)
T 1rpn_A           20 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-------WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   92 (335)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-------cchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence            7999999999999999999999999998764210       00000  13578999999999999999998556899999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CC-CeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHH
Q 025702           79 INGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (249)
                      +++..                ..++.++++++.  ++ ++||++||..+|+.....+++|+.+..|.+.| .+|..+|.+
T Consensus        93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~  172 (335)
T 1rpn_A           93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWI  172 (335)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHH
Confidence            99853                224678888877  64 89999999999998777788899888888888 999999998


Q ss_pred             Hhh----cCCcEEEeecceeeCCCCCcch----HHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          139 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       139 ~~~----~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      ++.    .+++++++||+++|||+....+    +..++..+..+.. ...++++.+.++++|++|+|++++.+++++.  
T Consensus       173 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--  250 (335)
T 1rpn_A          173 TVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--  250 (335)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--
T ss_pred             HHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--
Confidence            753    4899999999999999754332    4445555566653 3345778889999999999999999998865  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          210 RQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       210 ~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      +++||+++++.+|+.|+++.+.+.+|.+
T Consensus       251 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~  278 (335)
T 1rpn_A          251 ADDYVVATGVTTTVRDMCQIAFEHVGLD  278 (335)
T ss_dssp             CCCEEECCSCEEEHHHHHHHHHHTTTCC
T ss_pred             CCEEEEeCCCCccHHHHHHHHHHHhCCC
Confidence            4799999999999999999999999975

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=4.4e-35  Score=235.01  Aligned_cols=216  Identities=16%  Similarity=0.198  Sum_probs=179.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++|+      +....                ...++++.+|++|.+.+.++++..++|+|||++
T Consensus        12 tGatG~iG~~l~~~L~~~g~------~~~~~----------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A   69 (319)
T 4b8w_A           12 TGGSGLVGKAIQKVVADGAG------LPGED----------------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLA   69 (319)
T ss_dssp             ETCSSHHHHHHHHHHHTTTC------CTTCE----------------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhcCC------ccccc----------------ccccCceecccCCHHHHHHHHhhcCCCEEEECc
Confidence            79999999999999999998      11111                134555688999999999999966699999998


Q ss_pred             CCC-----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCC----CCCCCCc-c-cchHHH
Q 025702           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPKSR-H-KGKLNT  135 (249)
Q Consensus        81 ~~~-----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~~~-~-~~k~~~  135 (249)
                      +..                 +.++.+++++++  ++++|||+||..+||.....+++|+.    +..|.+. | .+|..+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  149 (319)
T 4b8w_A           70 AMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMI  149 (319)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHH
T ss_pred             eecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHH
Confidence            862                 235778899987  78899999999999988888888886    5666663 6 999999


Q ss_pred             HHHHh----hcCCcEEEeecceeeCCCCC-----cchHHHHHHH----HHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          136 ESVLE----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHR----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       136 e~~~~----~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      |++++    +.+++++++||+++|||+..     ..+++.++..    +..+.++.+++++.+.++++|++|+|++++.+
T Consensus       150 E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  229 (319)
T 4b8w_A          150 DVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV  229 (319)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHH
Confidence            98874    46899999999999999753     3456666666    77888888889999999999999999999999


Q ss_pred             hcCCC-CCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          203 LGNEK-ASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       203 ~~~~~-~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      ++++. ..+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       230 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  266 (319)
T 4b8w_A          230 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHG  266 (319)
T ss_dssp             HHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCS
T ss_pred             HhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCC
Confidence            98743 3467999999999999999999999999653

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=4.4e-34  Score=232.22  Aligned_cols=239  Identities=19%  Similarity=0.206  Sum_probs=185.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCC-CCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-PGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++++++|+++|++|++++|......... .......+.. ...+++++.+|++|.+++.++++..++|+|||
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih   87 (348)
T 1ek6_A            8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH   87 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            799999999999999999999999998754300000 0000001111 13578999999999999999998668999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCC-CCcc-cchHHHHHH
Q 025702           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTESV  138 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~-~~k~~~e~~  138 (249)
                      +|+..                ..++.+++++++  ++++||++||..+|+.....+++|+.+..| .+.| .+|..+|.+
T Consensus        88 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~  167 (348)
T 1ek6_A           88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (348)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             CCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHH
Confidence            99863                235778888876  678999999999999877778888888777 6777 999999998


Q ss_pred             Hhhc---C--CcEEEeecceeeCCCC-----------CcchHHHHHHHHH-cCCCeeecC------CCcceEeeeeHHHH
Q 025702          139 LESK---G--VNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDL  195 (249)
Q Consensus       139 ~~~~---~--~~~~~~r~~~v~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~  195 (249)
                      ++..   +  ++++++||+++|||+.           ...+++.+..... .+..+.+++      ++.+.++++|++|+
T Consensus       168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv  247 (348)
T 1ek6_A          168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL  247 (348)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHH
Confidence            7532   4  8999999999999842           1345666666665 566666655      56788999999999


Q ss_pred             HHHHHHHhcCCC-CCC-ceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          196 ARAFVQVLGNEK-ASR-QVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       196 a~~~~~~~~~~~-~~~-~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      |++++.+++++. ..+ ++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       248 a~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  293 (348)
T 1ek6_A          248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP  293 (348)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCc
Confidence            999999997642 234 79999999999999999999999997543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=7e-34  Score=229.97  Aligned_cols=230  Identities=23%  Similarity=0.275  Sum_probs=187.0

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCc-cccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      |||+||||++++++|+++|  ++|++++|.+.. ....+..     +. ...+++++.+|++|.+.+.+++.  ++|+||
T Consensus         9 TGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (336)
T 2hun_A            9 TGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKD-----LE-DDPRYTFVKGDVADYELVKELVR--KVDGVV   80 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTT-----TT-TCTTEEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred             ECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhh-----hc-cCCceEEEEcCCCCHHHHHHHhh--CCCEEE
Confidence            7999999999999999996  899999997532 1111110     00 03578999999999999999997  999999


Q ss_pred             ecCCCC----------------hhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHH
Q 025702           78 DINGRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        78 ~~~~~~----------------~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (249)
                      |+|+..                +.++.++++++.  + .++||++||..+||.....+++|+.+..|.+.| .+|..+|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence            999863                235677888876  4 379999999999997766788888888888888 99999999


Q ss_pred             HHhh----cCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCce
Q 025702          138 VLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV  212 (249)
Q Consensus       138 ~~~~----~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~  212 (249)
                      +++.    .+++++++||+++|||+.. ..+++.++..+..+..+.+++++.+.++++|++|+|++++.+++++. .+++
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~g~~  239 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-SREI  239 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-TTCE
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-CCCE
Confidence            8753    5899999999999999754 34566777777888888877888888999999999999999997654 5789


Q ss_pred             EEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          213 FNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       213 ~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      ||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~  266 (336)
T 2hun_A          240 YNISAGEEKTNLEVVKIILRLMGKGEE  266 (336)
T ss_dssp             EEECCSCEECHHHHHHHHHHHTTCCST
T ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCcc
Confidence            999999999999999999999997644

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=5.4e-34  Score=231.67  Aligned_cols=228  Identities=17%  Similarity=0.195  Sum_probs=188.1

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCcc-ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      |||+||||++++++|+++  |++|++++|++... ...+.     .+  ...+++++.+|++|.+.+.++++  ++|+||
T Consensus        10 TGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-----~~--~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi   80 (348)
T 1oc2_A           10 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-----AI--LGDRVELVVGDIADAELVDKLAA--KADAIV   80 (348)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-----GG--CSSSEEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred             eCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-----hh--ccCCeEEEECCCCCHHHHHHHhh--cCCEEE
Confidence            799999999999999999  89999999976421 11110     00  02578999999999999999998  889999


Q ss_pred             ecCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCC------------CCCCCCCCCCCCC
Q 025702           78 DINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL------------LPHCETDTVDPKS  127 (249)
Q Consensus        78 ~~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~------------~~~~e~~~~~~~~  127 (249)
                      |+|+..                +.++.++++++.  ++ +||++||..+||....            .+++|+.+..|.+
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (348)
T 1oc2_A           81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS  159 (348)
T ss_dssp             ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCS
T ss_pred             ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCC
Confidence            999863                234778888876  66 9999999999986532            5778888878888


Q ss_pred             cc-cchHHHHHHHhh----cCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          128 RH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       128 ~~-~~k~~~e~~~~~----~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      .| .+|..+|.+++.    .+++++++||+++|||+.. ..+++.++..+..+.++.+++++.+.++++|++|+|++++.
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  239 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA  239 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHH
Confidence            88 999999998753    5899999999999999854 35666777777788777777888889999999999999999


Q ss_pred             HhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          202 VLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      +++++. .+++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       240 ~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  276 (348)
T 1oc2_A          240 ILTKGR-MGETYLIGADGEKNNKEVLELILEKMGQPKD  276 (348)
T ss_dssp             HHHHCC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTT
T ss_pred             HhhCCC-CCCeEEeCCCCCCCHHHHHHHHHHHhCCCcc
Confidence            998654 5789999999999999999999999997644

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.7e-34  Score=232.87  Aligned_cols=218  Identities=17%  Similarity=0.189  Sum_probs=178.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++++++|+++|++|++++|++..... +.          ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus        19 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l~----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a   85 (342)
T 2x4g_A           19 LGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LA----------YLEPECRVAEMLDHAGLERALR--GLDGVIFSA   85 (342)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-GG----------GGCCEEEECCTTCHHHHHHHTT--TCSEEEEC-
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-hc----------cCCeEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            7999999999999999999999999998765321 11          2378999999999999999998  899999998


Q ss_pred             CCC--------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCC--CCCCCCCCCCC----CCcc-cchHHHHH
Q 025702           81 GRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL--LPHCETDTVDP----KSRH-KGKLNTES  137 (249)
Q Consensus        81 ~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~--~~~~e~~~~~~----~~~~-~~k~~~e~  137 (249)
                      +..              ..++.++++++.  ++++||++||..+|+....  .+ +|+.+..|    .+.| .+|..+|.
T Consensus        86 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~  164 (342)
T 2x4g_A           86 GYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDE  164 (342)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHH
T ss_pred             ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHH
Confidence            852              335788999977  7899999999999986544  44 78877777    7778 99999999


Q ss_pred             HHhh---cCCcEEEeecceeeCCCC-CcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceE
Q 025702          138 VLES---KGVNWTSLRPVYIYGPLN-YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (249)
Q Consensus       138 ~~~~---~~~~~~~~r~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (249)
                      +++.   .+++++++||+++|||+. ... +..++..+..+....+   ++..++++|++|+|++++.+++++.. +++|
T Consensus       165 ~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~  239 (342)
T 2x4g_A          165 QAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERY  239 (342)
T ss_dssp             HHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred             HHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence            8754   289999999999999976 323 4556666667665544   45678999999999999999987664 7899


Q ss_pred             EecCCccccHHHHHHHHHHHhCCCc
Q 025702          214 NISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       214 ~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      |+++++ +|+.|+++.+.+.+|.+.
T Consensus       240 ~v~~~~-~s~~e~~~~i~~~~g~~~  263 (342)
T 2x4g_A          240 LLTGHN-LEMADLTRRIAELLGQPA  263 (342)
T ss_dssp             EECCEE-EEHHHHHHHHHHHHTCCC
T ss_pred             EEcCCc-ccHHHHHHHHHHHhCCCC
Confidence            999999 999999999999999754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-34  Score=229.39  Aligned_cols=205  Identities=14%  Similarity=0.123  Sum_probs=181.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++++++|+++|++|++++|.                          .+|+.|.+.+.++++..++|+|||++
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~D~~d~~~~~~~~~~~~~d~vi~~a   64 (287)
T 3sc6_A           11 TGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------LLDITNISQVQQVVQEIRPHIIIHCA   64 (287)
T ss_dssp             ESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999993                          25889999999999866799999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +..                ..++.+++++++  +. ||||+||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  143 (287)
T 3sc6_A           65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKE  143 (287)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            863                234678999987  55 7999999999998888899999999999988 999999999998


Q ss_pred             cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccc
Q 025702          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (249)
Q Consensus       142 ~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (249)
                      ...+++++||+++|||+. ..++..++.....+.++.+.++  +.++++|++|+|++++.+++++.  +++||+++++.+
T Consensus       144 ~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~  218 (287)
T 3sc6_A          144 LHNKYFIVRTSWLYGKYG-NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSC  218 (287)
T ss_dssp             HCSSEEEEEECSEECSSS-CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCE
T ss_pred             hCCCcEEEeeeeecCCCC-CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcc
Confidence            888999999999999964 3567777778877888777654  78899999999999999999876  679999999999


Q ss_pred             cHHHHHHHHHHHhCCC
Q 025702          222 TFDGLARACAKVTGYC  237 (249)
Q Consensus       222 s~~~l~~~~~~~~g~~  237 (249)
                      |+.|+++.+.+.+|.+
T Consensus       219 s~~e~~~~i~~~~g~~  234 (287)
T 3sc6_A          219 SWFEFAKKIFSYANMK  234 (287)
T ss_dssp             EHHHHHHHHHHHHTCC
T ss_pred             cHHHHHHHHHHHcCCC
Confidence            9999999999999965

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.1e-33  Score=228.22  Aligned_cols=221  Identities=18%  Similarity=0.190  Sum_probs=182.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++++++|+++|++|++++|+..........         ..+++++.+|++|.+++.++++..++|+|||+|
T Consensus        26 TGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           26 TGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP---------VAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             ETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc---------cCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            79999999999999999999999999976543211110         147899999999999999998766899999999


Q ss_pred             CCC-------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCC--CCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           81 GRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLL--PHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        81 ~~~-------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~--~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +..             ..++.++++++.  ++++||++||..+|+.....  +++|+.  .|.+.| .+|..+|.+++..
T Consensus        97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A           97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHHHTC
T ss_pred             ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHHHHc
Confidence            853             235678888876  78899999999999875443  666766  566777 9999999999888


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH-HHHHHhcCCCCCCceEEecCCccc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR-AFVQVLGNEKASRQVFNISGEKYV  221 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~-~~~~~~~~~~~~~~~~~i~~~~~~  221 (249)
                      +++++++||+++|||+....++..++..+.++.  ..++++. .++++|++|+|+ +++.+++++.  +++||+++++.+
T Consensus       175 ~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~  249 (330)
T 2pzm_A          175 DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGH  249 (330)
T ss_dssp             SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCE
T ss_pred             CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCC
Confidence            999999999999999864566666677666665  3345555 789999999999 9999998754  789999999999


Q ss_pred             cHHHHHHHHHHHhCCC
Q 025702          222 TFDGLARACAKVTGYC  237 (249)
Q Consensus       222 s~~~l~~~~~~~~g~~  237 (249)
                      |+.|+++.+.+.+|.+
T Consensus       250 s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          250 SIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             EHHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHHHhCCC
Confidence            9999999999999976

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-35  Score=234.72  Aligned_cols=222  Identities=16%  Similarity=0.185  Sum_probs=169.7

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC---CCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~---~~d~V   76 (249)
                      ||||||+|++++++|+++| ++|++++|.+.....       ..    ..+++ +.+|+.|.+.+.++++..   ++|+|
T Consensus         5 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-------~~----~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VN----LVDLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-------HH----HHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             EcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh-------hh----cCcce-eccccccHHHHHHHHhccccCCCcEE
Confidence            7999999999999999999 999999998654210       00    11333 678999999999988721   49999


Q ss_pred             EecCCCC--------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           77 YDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        77 i~~~~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      ||+++..              ..++.++++++.  ++ +||++||..+|+.....+++|+.+..|.+.| .+|..+|.++
T Consensus        73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~  151 (310)
T 1eq2_A           73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (310)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            9998852              235788999877  77 9999999999998776678888888888888 9999999987


Q ss_pred             hh----cCCcEEEeecceeeCCCCC-----cchHHHHHHHHHcCCCeeecCCCcc-eEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          140 ES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       140 ~~----~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      +.    .+++++++||+++|||+..     ..++..++..+.++.++.+++++.. .++++|++|+|++++.+++++.  
T Consensus       152 ~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--  229 (310)
T 1eq2_A          152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (310)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             HHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence            53    4789999999999999754     3567778888888887777778888 8999999999999999998765  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          210 RQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       210 ~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      +++||+++++.+|+.|+++.+.+.+|.+
T Consensus       230 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          230 SGIFNLGTGRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-------
T ss_pred             CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999965

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=1.2e-33  Score=234.11  Aligned_cols=236  Identities=18%  Similarity=0.203  Sum_probs=184.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcccc------CCCC--CCchhh----hhccCceEEEEeccCCHHHHHHhh
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ------QLPG--ESDQEF----AEFSSKILHLKGDRKDYDFVKSSL   68 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~------~~~~--~~~~~~----~~~~~~v~~~~~d~~d~~~l~~~~   68 (249)
                      ||||||||++++++|+++|++|++++|.......      .+..  ......    .....+++++.+|++|.+.+.+++
T Consensus        17 TG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~   96 (404)
T 1i24_A           17 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   96 (404)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHHHHHH
Confidence            7999999999999999999999999986432100      0000  000000    011357899999999999999999


Q ss_pred             hhCCCcEEEecCCCC-------------------hhhhHHHHHhCC--CC-CeEEEeeccccccCCCCCCCCCC------
Q 025702           69 SAKGFDVVYDINGRE-------------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCET------  120 (249)
Q Consensus        69 ~~~~~d~Vi~~~~~~-------------------~~~~~~~~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~------  120 (249)
                      +..++|+|||+|+..                   +.++.++++++.  +. ++||++||..+||... .+++|+      
T Consensus        97 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~~~~~~~  175 (404)
T 1i24_A           97 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEGYITITH  175 (404)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEE
T ss_pred             hccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCcccccccc
Confidence            844599999999852                   224677888876  55 5999999999998654 355554      


Q ss_pred             --------CCCCCCCcc-cchHHHHHHHhh----cCCcEEEeecceeeCCCCC------------------cchHHHHHH
Q 025702          121 --------DTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH  169 (249)
Q Consensus       121 --------~~~~~~~~~-~~k~~~e~~~~~----~~~~~~~~r~~~v~g~~~~------------------~~~~~~~~~  169 (249)
                              .+..|.+.| .+|..+|.+++.    .+++++++||+++|||+..                  ...+..++.
T Consensus       176 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (404)
T 1i24_A          176 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV  255 (404)
T ss_dssp             TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred             ccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHH
Confidence                    355667778 999999987643    4899999999999999753                  346778888


Q ss_pred             HHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC--ceEEecCCccccHHHHHHHHHHH---hCCCc
Q 025702          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKV---TGYCI  238 (249)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~--~~~~i~~~~~~s~~~l~~~~~~~---~g~~~  238 (249)
                      .+..+.++.+++++.+.++++|++|+|++++.+++++...+  ++||+++ +.+|+.|+++.+.+.   +|.+.
T Consensus       256 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~  328 (404)
T 1i24_A          256 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDV  328 (404)
T ss_dssp             HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCC
T ss_pred             HHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCc
Confidence            88888888777888889999999999999999998865445  6999998 889999999999998   77653

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=5e-34  Score=234.41  Aligned_cols=223  Identities=19%  Similarity=0.260  Sum_probs=183.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++++++|+++|++|++++|++...... .          ..+++++.+|+.|.+.+.++++  ++|+|||++
T Consensus        35 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~----------~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A  101 (379)
T 2c5a_A           35 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-D----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA  101 (379)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-G----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-c----------cCCceEEECCCCCHHHHHHHhC--CCCEEEECc
Confidence            79999999999999999999999999987652211 0          2478999999999999999998  999999998


Q ss_pred             CCC-----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCC-----CCCCCCC--CCCCCCcc-cchH
Q 025702           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-----LPHCETD--TVDPKSRH-KGKL  133 (249)
Q Consensus        81 ~~~-----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~-----~~~~e~~--~~~~~~~~-~~k~  133 (249)
                      +..                 ..++.++++++.  ++++||++||..+|+....     .+++|+.  +..|.+.| .+|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~  181 (379)
T 2c5a_A          102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  181 (379)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence            852                 124677888876  7889999999999985322     3355555  55667777 9999


Q ss_pred             HHHHHHh----hcCCcEEEeecceeeCCCCCc-----chHHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       134 ~~e~~~~----~~~~~~~~~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      .+|.+++    +.+++++++||+++|||+...     ..+..++..+..+.+ +.+++++.+.++++|++|+|++++.++
T Consensus       182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l  261 (379)
T 2c5a_A          182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  261 (379)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence            9998874    358999999999999997432     256677777767765 777788888999999999999999999


Q ss_pred             cCCCCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      +++  .+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       262 ~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  294 (379)
T 2c5a_A          262 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKL  294 (379)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCC
T ss_pred             hcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCC
Confidence            876  467999999999999999999999999653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=1.3e-33  Score=230.28  Aligned_cols=231  Identities=14%  Similarity=0.180  Sum_probs=185.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++|+++|+++|++|++++|++.......     ..+ ....+++++.+|+.|.+.+.++++..++|+|||++
T Consensus        15 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A           15 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF-----ETA-RVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH-----HHT-TTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhh-----Hhh-ccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            799999999999999999999999999875522110     000 01357899999999999999999855699999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--C-CCeEEEeeccccccCCCC-CCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDL-LPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~-~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      +..                +.++.++++++.  + +++||++||..+||.... .++.|+.+..|.+.| .+|..+|.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  168 (357)
T 1rkx_A           89 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  168 (357)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             CCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence            842                234677888876  4 789999999999987543 467777777788888 9999999987


Q ss_pred             hhc-------------CCcEEEeecceeeCCCCC--cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          140 ESK-------------GVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       140 ~~~-------------~~~~~~~r~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      +..             +++++++||+++|||+..  ..+++.++..+.++..+.+. ++...++++|++|+|++++.+++
T Consensus       169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHH
Confidence            432             899999999999999753  35777888888888877654 46678999999999999999987


Q ss_pred             C----CCCCCceEEecCC--ccccHHHHHHHHHHHhCCCc
Q 025702          205 N----EKASRQVFNISGE--KYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       205 ~----~~~~~~~~~i~~~--~~~s~~~l~~~~~~~~g~~~  238 (249)
                      +    +...+++||++++  +.+|+.|+++.+.+.+|.+.
T Consensus       248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~  287 (357)
T 1rkx_A          248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA  287 (357)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred             hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCC
Confidence            4    2345789999974  68999999999999999643

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.9e-34  Score=230.69  Aligned_cols=218  Identities=21%  Similarity=0.311  Sum_probs=180.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCc---cccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP---IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      ||||||+|++|+++|+++|++|++++|++..   ....+..     + ....+++++.+|+.            ++|+||
T Consensus        13 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~-~~~~~~~~~~~Dl~------------~~d~vi   74 (321)
T 3vps_A           13 TGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK-----F-LEKPVLELEERDLS------------DVRLVY   74 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE-----E-ECSCGGGCCHHHHT------------TEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh-----h-ccCCCeeEEeCccc------------cCCEEE
Confidence            7999999999999999999999999998762   1111110     0 00134444555543            899999


Q ss_pred             ecCCCC---------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           78 DINGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        78 ~~~~~~---------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      |+++..               +.++.+++++++  ++++|||+||..+|+.....+++|+.+..|.+.| .+|..+|.++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            999853               345688999987  7899999999999999888899999999998888 9999999987


Q ss_pred             hh----cCC-cEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceE
Q 025702          140 ES----KGV-NWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (249)
Q Consensus       140 ~~----~~~-~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (249)
                      +.    .++ +++++||+++|||+.. ..+++.++..+..+.++.+++++...++++|++|+|++++.+++++.. + +|
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~~  232 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-VV  232 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-EE
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-eE
Confidence            54    588 9999999999999754 356778888888888888888888999999999999999999998875 6 99


Q ss_pred             EecCCccccHHHHHHHHHHHhCCCcc
Q 025702          214 NISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       214 ~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      |+++++.+|+.|+++.+. .+|.+.+
T Consensus       233 ~i~~~~~~s~~e~~~~i~-~~g~~~~  257 (321)
T 3vps_A          233 NFGSGQSLSVNDVIRILQ-ATSPAAE  257 (321)
T ss_dssp             EESCSCCEEHHHHHHHHH-TTCTTCE
T ss_pred             EecCCCcccHHHHHHHHH-HhCCCCc
Confidence            999999999999999999 9996543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.2e-33  Score=228.45  Aligned_cols=219  Identities=21%  Similarity=0.241  Sum_probs=180.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++++++|+++|++|++++|++......+..         ..+++++.+|++|.+.+.++++..++|+|||++
T Consensus        27 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           27 TGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---------HPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---------cCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            79999999999999999999999999986543222211         147899999999999999999833499999999


Q ss_pred             CCC-------------hhhhHHHHHhCC--CCCeEEEeecccccc----CCCCCCCCCCCCCCCC-Ccc-cchHHHHHHH
Q 025702           81 GRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYL----KSDLLPHCETDTVDPK-SRH-KGKLNTESVL  139 (249)
Q Consensus        81 ~~~-------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~----~~~~~~~~e~~~~~~~-~~~-~~k~~~e~~~  139 (249)
                      +..             ..++.++++++.  ++++||++||..+|+    .... +++|+.  .|. +.| .+|..+|.++
T Consensus        98 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~~  174 (333)
T 2q1w_A           98 ASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDYL  174 (333)
T ss_dssp             CCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHHH
T ss_pred             eecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHHH
Confidence            853             235678888876  778999999999998    5444 677766  565 667 9999999999


Q ss_pred             hh-cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCC
Q 025702          140 ES-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE  218 (249)
Q Consensus       140 ~~-~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~  218 (249)
                      +. .. +++++||+++|||+....+++.++..+..+.  .+++ +...+++++++|+|++++.+++++.  +++||++++
T Consensus       175 ~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~  248 (333)
T 2q1w_A          175 EYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSG  248 (333)
T ss_dssp             HHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCS
T ss_pred             HhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCC
Confidence            87 66 9999999999999844456677777766665  3334 5677899999999999999998865  789999999


Q ss_pred             ccccHHHHHHHHHHHhCCC
Q 025702          219 KYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       219 ~~~s~~~l~~~~~~~~g~~  237 (249)
                      +.+|+.|+++.+.+.+|.+
T Consensus       249 ~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          249 TDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             CCEEHHHHHHHHHHHTTCS
T ss_pred             CCccHHHHHHHHHHHhCCC
Confidence            9999999999999999975

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.5e-33  Score=233.02  Aligned_cols=239  Identities=21%  Similarity=0.284  Sum_probs=182.7

Q ss_pred             CCCcccchHHHHHHHH-HcCCeEEEEecCCCccccCCCCCCchhh----hhc-----cCc---eEEEEeccCCHHHHHHh
Q 025702            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEF----AEF-----SSK---ILHLKGDRKDYDFVKSS   67 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~-----~~~---v~~~~~d~~d~~~l~~~   67 (249)
                      |||+||||++++++|+ ++|++|++++|........-.......+    ...     ..+   ++++.+|++|.+.+.++
T Consensus         8 TGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   87 (397)
T 1gy8_A            8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (397)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHH
Confidence            7999999999999999 9999999999976542000000000001    000     124   88999999999999999


Q ss_pred             hhhCC-CcEEEecCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCC-------CCCCCCCC
Q 025702           68 LSAKG-FDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-------LLPHCETD  121 (249)
Q Consensus        68 ~~~~~-~d~Vi~~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~-------~~~~~e~~  121 (249)
                      ++..+ +|+|||+|+..                +.++.++++++.  ++++||++||..+|+...       ..+++|+.
T Consensus        88 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~  167 (397)
T 1gy8_A           88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (397)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             HHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCccC
Confidence            87656 99999999863                235777888876  678999999999998765       57888888


Q ss_pred             CCCCCCcc-cchHHHHHHHhh----cCCcEEEeecceeeCCCC----------CcchHHHHH----HHHHcCC-------
Q 025702          122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN----------YNPVEEWFF----HRLKAGR-------  175 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~~----~~~~~~~~r~~~v~g~~~----------~~~~~~~~~----~~~~~~~-------  175 (249)
                      +..|.+.| .+|..+|.+++.    .+++++++||+++|||+.          ...+++.++    ..+..+.       
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (397)
T 1gy8_A          168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (397)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccc
Confidence            88888888 999999998753    489999999999999963          133455444    1333332       


Q ss_pred             -----CeeecC------CCcceEeeeeHHHHHHHHHHHhcCCCCC-----C---ceEEecCCccccHHHHHHHHHHHhCC
Q 025702          176 -----PIPIPG------SGIQVTQLGHVKDLARAFVQVLGNEKAS-----R---QVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       176 -----~~~~~~------~~~~~~~~i~~~D~a~~~~~~~~~~~~~-----~---~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                           ++.+++      ++.+.++++|++|+|++++.+++++...     +   ++||+++++.+|+.|+++.+.+.+|.
T Consensus       248 ~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  327 (397)
T 1gy8_A          248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (397)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             cccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCC
Confidence                 455655      5678899999999999999999764322     3   79999999999999999999999997


Q ss_pred             Ccc
Q 025702          237 CIA  239 (249)
Q Consensus       237 ~~~  239 (249)
                      +.+
T Consensus       328 ~~~  330 (397)
T 1gy8_A          328 PIP  330 (397)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=1.4e-34  Score=229.01  Aligned_cols=212  Identities=19%  Similarity=0.225  Sum_probs=176.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||+ ||+|++|+++|+++|++|++++|++.+.... .          ..+++++.+|+.|.+     ++  ++|+|||++
T Consensus        11 tGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~----------~~~~~~~~~D~~d~~-----~~--~~d~vi~~a   71 (286)
T 3ius_A           11 FGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAI-R----------ASGAEPLLWPGEEPS-----LD--GVTHLLIST   71 (286)
T ss_dssp             ETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHH-H----------HTTEEEEESSSSCCC-----CT--TCCEEEECC
T ss_pred             ECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhH-h----------hCCCeEEEecccccc-----cC--CCCEEEECC
Confidence            698 9999999999999999999999987652111 0          257999999999844     55  999999999


Q ss_pred             CCCh---hhhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc-CCcEEEeec
Q 025702           81 GREA---DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK-GVNWTSLRP  151 (249)
Q Consensus        81 ~~~~---~~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~-~~~~~~~r~  151 (249)
                      +...   ..+.+++++++    ++++|||+||.++||.....+++|+.+..|.+.| .+|..+|++++.. +++++++||
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp  151 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL  151 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence            8642   34677777754    5789999999999998888889999999999988 9999999999887 999999999


Q ss_pred             ceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHH
Q 025702          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (249)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~  231 (249)
                      +++|||+...      +..+..+....+.++ .+.++++|++|+|++++.+++++. .+++||+++++.+|+.|+++.+.
T Consensus       152 ~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~  223 (286)
T 3ius_A          152 AGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDVIAYAA  223 (286)
T ss_dssp             CEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHHHHHHH
T ss_pred             cceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHHHHHHH
Confidence            9999997432      123345555555554 577899999999999999999887 57899999999999999999999


Q ss_pred             HHhCCCcc
Q 025702          232 KVTGYCIA  239 (249)
Q Consensus       232 ~~~g~~~~  239 (249)
                      +.+|.+.+
T Consensus       224 ~~~g~~~~  231 (286)
T 3ius_A          224 ELQGLPLP  231 (286)
T ss_dssp             HHHTCCCC
T ss_pred             HHcCCCCC
Confidence            99997644

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=7.5e-34  Score=231.67  Aligned_cols=221  Identities=17%  Similarity=0.202  Sum_probs=185.6

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC---CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~---~~d~   75 (249)
                      ||||||||++|+++|+++| ++|++++|++.... ..+            .++. +.+|+.|.+.+..+++..   ++|+
T Consensus        52 tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~  118 (357)
T 2x6t_A           52 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL------------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA  118 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT------------TTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc------------cCce-EeeecCcHHHHHHHHhhcccCCCCE
Confidence            7999999999999999999 99999999865421 111            1233 678999999999888731   5999


Q ss_pred             EEecCCCC--------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHH
Q 025702           76 VYDINGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (249)
Q Consensus        76 Vi~~~~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (249)
                      |||+++..              ..++.++++++.  ++ +||++||..+|+.....+++|+.+..|.+.| .+|..+|.+
T Consensus       119 Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          119 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY  197 (357)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             EEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence            99998852              335788999877  77 9999999999998776788888888888888 999999998


Q ss_pred             Hhh----cCCcEEEeecceeeCCCCC-----cchHHHHHHHHHcCCCeeecCCCcc-eEeeeeHHHHHHHHHHHhcCCCC
Q 025702          139 LES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQ-VTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       139 ~~~----~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      ++.    .+++++++||+++|||+..     ...+..++..+..+..+.+++++.. .++++|++|+|++++.+++++. 
T Consensus       198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-  276 (357)
T 2x6t_A          198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  276 (357)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence            753    4789999999999999754     3567777788888887777788888 8999999999999999998765 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          209 SRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       209 ~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                       +++||+++++.+|+.|+++.+.+.+|.+
T Consensus       277 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          277 -SGIFNLGTGRAESFQAVADATLAYHKKG  304 (357)
T ss_dssp             -CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             -CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence             7899999999999999999999999975

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-33  Score=227.93  Aligned_cols=233  Identities=21%  Similarity=0.295  Sum_probs=180.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++++++|+++|++|++++|.........    ...+.. ..+++++.+|++|.+.+.++++..++|+|||+|
T Consensus         7 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            7 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN----LHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHH----HHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhh----hhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            799999999999999999999999998643211000    000111 235889999999999999999833499999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCC-eEEEeeccccccCCCCCC----------------CCCCCCCCC
Q 025702           81 GRE----------------ADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLP----------------HCETDTVDP  125 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~-~~i~~Ss~~v~~~~~~~~----------------~~e~~~~~~  125 (249)
                      +..                +.++.++++++.  +.+ +||++||..+|+.....+                ++|+.+..|
T Consensus        82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~  161 (347)
T 1orr_A           82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  161 (347)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCC
Confidence            863                234678888876  564 999999999998654332                455666667


Q ss_pred             CCcc-cchHHHHHHHhh----cCCcEEEeecceeeCCCCCc----chHHHHHHHHHcCC-----CeeecCCCcceEeeee
Q 025702          126 KSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGR-----PIPIPGSGIQVTQLGH  191 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~~----~~~~~~~~r~~~v~g~~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~  191 (249)
                      .+.| .+|..+|.+++.    .+++++++||+++|||+...    ..+..++.....+.     ++..++++.+.++++|
T Consensus       162 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  241 (347)
T 1orr_A          162 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  241 (347)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEE
Confidence            7778 999999998754    48999999999999997532    34555665555444     6667788889999999


Q ss_pred             HHHHHHHHHHHhcC-CCCCCceEEecCCc--cccHHHHHHHHHHHhCCCc
Q 025702          192 VKDLARAFVQVLGN-EKASRQVFNISGEK--YVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       192 ~~D~a~~~~~~~~~-~~~~~~~~~i~~~~--~~s~~~l~~~~~~~~g~~~  238 (249)
                      ++|+|++++.++++ +...+++||++++.  .+|+.|+++.+.+.+|.+.
T Consensus       242 v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~  291 (347)
T 1orr_A          242 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM  291 (347)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC
Confidence            99999999999986 23357899999987  4999999999999999653

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=9.6e-34  Score=225.60  Aligned_cols=210  Identities=17%  Similarity=0.157  Sum_probs=180.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++++++|+ +|++|++++|++.                      ++.+|+.|.+.+.++++..++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------~~~~D~~d~~~~~~~~~~~~~d~vih~a   62 (299)
T 1n2s_A            6 FGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------EFCGDFSNPKGVAETVRKLRPDVIVNAA   62 (299)
T ss_dssp             ECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------SSCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------cccccCCCHHHHHHHHHhcCCCEEEECc
Confidence            7999999999999999 8999999999752                      1367999999999999844699999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +..                ..++.+++++++  ++ ||||+||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  141 (299)
T 1n2s_A           63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD  141 (299)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            853                234788999977  55 8999999999998777788999888888888 999999999988


Q ss_pred             cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC--C-CCceEEecCC
Q 025702          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK--A-SRQVFNISGE  218 (249)
Q Consensus       142 ~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~-~~~~~~i~~~  218 (249)
                      ...+++++||+++|||+.. .++..++..+..+.++...++  +.++++|++|+|++++.+++++.  . .+++||++++
T Consensus       142 ~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          142 NCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG  218 (299)
T ss_dssp             HCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB
T ss_pred             hCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC
Confidence            7779999999999999754 466677777777877766654  77899999999999999998752  2 3789999999


Q ss_pred             ccccHHHHHHHHHHHhCCC
Q 025702          219 KYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       219 ~~~s~~~l~~~~~~~~g~~  237 (249)
                      +.+|+.|+++.+.+.+|.+
T Consensus       219 ~~~s~~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          219 GTTTWHDYAALVFDEARKA  237 (299)
T ss_dssp             SCEEHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCC
Confidence            9999999999999999865

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.1e-33  Score=227.33  Aligned_cols=213  Identities=23%  Similarity=0.320  Sum_probs=176.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++|+++|+++|++|++++|+.                         .+|+.|.+.+.++++..++|+|||++
T Consensus         9 tGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------~~D~~d~~~~~~~~~~~~~d~vih~a   63 (321)
T 1e6u_A            9 AGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERIDQVYLAA   63 (321)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence            79999999999999999999999988752                         24899999999998766899999999


Q ss_pred             CCCh-----------------hhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCC----CCCCC-Ccc-cchHHH
Q 025702           81 GREA-----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD----TVDPK-SRH-KGKLNT  135 (249)
Q Consensus        81 ~~~~-----------------~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~----~~~~~-~~~-~~k~~~  135 (249)
                      +...                 .++.++++++.  ++++|||+||..+|+.....+++|+.    +..|. +.| .+|..+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  143 (321)
T 1e6u_A           64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  143 (321)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHH
Confidence            8632                 35678888876  78899999999999987667777776    44553 356 999999


Q ss_pred             HHHHhh----cCCcEEEeecceeeCCCCC-----cchHHHHHHHHHc----C-CCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          136 ESVLES----KGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKA----G-RPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       136 e~~~~~----~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      |.+++.    .+++++++||+++|||+..     ..+++.++..+..    + .++.+++++...++++|++|+|++++.
T Consensus       144 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~  223 (321)
T 1e6u_A          144 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  223 (321)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHH
Confidence            998754    5899999999999999754     2566666666643    3 566667888889999999999999999


Q ss_pred             HhcCCCCC--------CceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          202 VLGNEKAS--------RQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       202 ~~~~~~~~--------~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      +++++...        +++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  268 (321)
T 1e6u_A          224 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG  268 (321)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS
T ss_pred             HHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence            99886542        58999999999999999999999999653

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=8.6e-33  Score=225.68  Aligned_cols=231  Identities=20%  Similarity=0.232  Sum_probs=187.2

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCc-cccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP-IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++++++|++. |++|++++|.+.. ....+..     +. ...+++++.+|++|.+.+.++++..++|+|||
T Consensus         6 TGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD-----IS-ESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT-----TT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhh-----hh-cCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999998 7999999997532 1111110     00 03578999999999999999987668999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC----CCC-------eEEEeeccccccCCCC--C--------CCCCCC
Q 025702           79 INGRE----------------ADEVEPILDALP----NLE-------QFIYCSSAGVYLKSDL--L--------PHCETD  121 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~----~~~-------~~i~~Ss~~v~~~~~~--~--------~~~e~~  121 (249)
                      +|+..                +.++.++++++.    +++       +||++||..+||....  .        +++|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence            99863                235677888865    445       9999999999986532  1        677888


Q ss_pred             CCCCCCcc-cchHHHHHHHhh----cCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          122 TVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~~----~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      +..|.+.| .+|..+|.+++.    .+++++++||+++|||+.. ..+++.++..+.++.++.+++++...++++|++|+
T Consensus       160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  239 (361)
T 1kew_A          160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence            87888888 999999998753    4899999999999999754 34566777777788888877888889999999999


Q ss_pred             HHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      |++++.+++++. .+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       240 a~a~~~~~~~~~-~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  281 (361)
T 1kew_A          240 ARALHMVVTEGK-AGETYNIGGHNEKKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCCEEEHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCC-CCCEEEecCCCeeeHHHHHHHHHHHhCCcC
Confidence            999999998654 578999999999999999999999998643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-33  Score=221.75  Aligned_cols=205  Identities=19%  Similarity=0.198  Sum_probs=177.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++++++|+++|++|++++|+                          .+|+.|.+.+.++++..++|+|||++
T Consensus        18 tGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           18 TGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------DLDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            7999999999999999999999999986                          14889999999999755799999999


Q ss_pred             CCCh----------------hhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           81 GREA----------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        81 ~~~~----------------~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +...                .++.++++++.  +. +||++||..+|+.....+++|+.+..|.+.| .+|..+|.+++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  150 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA  150 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence            8632                34678888876  66 9999999999998777788999888888888 999999999988


Q ss_pred             cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccc
Q 025702          142 KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (249)
Q Consensus       142 ~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (249)
                      ...+++++||+.+||| . ..++..++.....+..+...+  +..++++|++|+|++++.+++++  .+++||+++++.+
T Consensus       151 ~~~~~~~lR~~~v~G~-~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~  224 (292)
T 1vl0_A          151 LNPKYYIVRTAWLYGD-G-NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGIC  224 (292)
T ss_dssp             HCSSEEEEEECSEESS-S-SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCE
T ss_pred             hCCCeEEEeeeeeeCC-C-cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCc
Confidence            8889999999999999 3 456666777777777666655  36789999999999999999876  5789999999999


Q ss_pred             cHHHHHHHHHHHhCCCc
Q 025702          222 TFDGLARACAKVTGYCI  238 (249)
Q Consensus       222 s~~~l~~~~~~~~g~~~  238 (249)
                      |+.|+++.+.+.+|.+.
T Consensus       225 s~~e~~~~i~~~~g~~~  241 (292)
T 1vl0_A          225 SWYDFAVEIFRLTGIDV  241 (292)
T ss_dssp             EHHHHHHHHHHHHCCCC
T ss_pred             cHHHHHHHHHHHhCCCC
Confidence            99999999999999653

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.3e-32  Score=222.66  Aligned_cols=234  Identities=22%  Similarity=0.285  Sum_probs=178.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+||||++++++|+++|++|++++|........+     ..+.. ...+++++.+|++|.+.+.++++..++|+|||+
T Consensus         6 TGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVL-----PVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHH-----HHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHH-----HHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            799999999999999999999999987643311100     01111 124688999999999999999985579999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCC-CCcc-cchHHHHHHH
Q 025702           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRH-KGKLNTESVL  139 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~-~~k~~~e~~~  139 (249)
                      |+..                ..++.+++++++  ++++||++||..+|+.....+++|+.+..| .+.| .+|..+|.++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            9852                234677888876  788999999999998776677778777654 6667 9999999987


Q ss_pred             hh----c-CCcEEEeecceeeCCCC-----------CcchHHHHHHHHH-cCCCeeecC------CCcceEeeeeHHHHH
Q 025702          140 ES----K-GVNWTSLRPVYIYGPLN-----------YNPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDLA  196 (249)
Q Consensus       140 ~~----~-~~~~~~~r~~~v~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~a  196 (249)
                      +.    . +++++++||+++|||..           ...+.+.+..... .+..+..++      ++.+.++++|++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva  240 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence            53    3 68999999999999841           1234555544444 344454443      456789999999999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      ++++.++++.  ...+++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus       241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~  285 (338)
T 1udb_A          241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN  285 (338)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCc
Confidence            9999998753  222379999999999999999999999996543

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2.6e-33  Score=224.37  Aligned_cols=220  Identities=14%  Similarity=0.094  Sum_probs=177.5

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||||++++++|+++  |++|++++|++....          +   ..+++++.+|+.|.+.+.++++..++|+|||
T Consensus         8 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~---~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            8 IGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD----------V---VNSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH----------H---HHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             ECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc----------c---cCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            799999999999999999  899999999865411          0   1367889999999999999998778999999


Q ss_pred             cCCCC---------------hhhhHHHHHhCC--CCCeEEEeeccccccCCC-CCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           79 INGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD-LLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        79 ~~~~~---------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      +++..               ..++.++++++.  ++++|||+||..+|+... ..+.+|+.+..|.+.| .+|..+|.++
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  154 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWC  154 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHH
Confidence            99863               234678888876  678999999999998743 3466777777888888 9999999887


Q ss_pred             h----hcCCcEEEeecceeeCCCCC-----cc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC-
Q 025702          140 E----SKGVNWTSLRPVYIYGPLNY-----NP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-  208 (249)
Q Consensus       140 ~----~~~~~~~~~r~~~v~g~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~-  208 (249)
                      +    +.+++++++||+++|||...     .. ....+...+ .+..+..++++.+.++++|++|+|++++.+++++.. 
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~  233 (312)
T 2yy7_A          155 EYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAI-ADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEK  233 (312)
T ss_dssp             HHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHH-HTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHH-cCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccc
Confidence            4    35899999999999996521     12 333333333 444566667778889999999999999999988653 


Q ss_pred             --CCceEEecCCccccHHHHHHHHHHHhC
Q 025702          209 --SRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       209 --~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                        .+++||+++ +.+|+.|+++.+.+.+|
T Consensus       234 ~~~~~~~ni~~-~~~s~~e~~~~i~~~~~  261 (312)
T 2yy7_A          234 IKIHSSYNLAA-MSFTPTEIANEIKKHIP  261 (312)
T ss_dssp             CCCSSCEECCS-EEECHHHHHHHHHTTCT
T ss_pred             cccCceEEeCC-CccCHHHHHHHHHHHCC
Confidence              247999986 88999999999999998

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-32  Score=224.30  Aligned_cols=235  Identities=17%  Similarity=0.148  Sum_probs=183.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+||||++++++|+++|++|++++|++................. ...+++++.+|+.|.+++.++++..++|+|||+
T Consensus        30 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~  109 (375)
T 1t2a_A           30 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL  109 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCEEEEC
Confidence            7999999999999999999999999998754211000000000000 135789999999999999999985568999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC--CC---CeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHH
Q 025702           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (249)
                      ++..                ..++.++++++.  ++   ++||++||..+|+.....+++|+.+..|.+.| .+|..+|.
T Consensus       110 A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  189 (375)
T 1t2a_A          110 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW  189 (375)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence            9863                234677888876  45   79999999999998777788898888888888 99999998


Q ss_pred             HHhh----cCCcEEEeecceeeCCCCCcch----HHHHHHHHHcCC-CeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          138 VLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       138 ~~~~----~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      +++.    .+++++++|++++|||+....+    +..++..+..+. ....++++.+.++++|++|+|++++.+++++. 
T Consensus       190 ~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-  268 (375)
T 1t2a_A          190 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-  268 (375)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC-
Confidence            8753    4899999999999999754332    334455555554 33445777889999999999999999998765 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          209 SRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       209 ~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                       +++||+++++.+|+.|+++.+.+.+|.+
T Consensus       269 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~  296 (375)
T 1t2a_A          269 -PEDFVIATGEVHSVREFVEKSFLHIGKT  296 (375)
T ss_dssp             -CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred             -CceEEEeCCCcccHHHHHHHHHHHhCCC
Confidence             4799999999999999999999999975

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.4e-33  Score=226.18  Aligned_cols=216  Identities=19%  Similarity=0.177  Sum_probs=164.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++++++|+++|++|++++|++..                 ++  ++.+|++|.+.+.++++..++|+|||++
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            8 TGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            7999999999999999999999999987543                 12  6789999999999998855699999998


Q ss_pred             CC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +.                |..++.++++++.  +. +|||+||..+|+. ...+++|+.+..|.+.| .+|..+|.+++.
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  146 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLE  146 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence            75                2345788999876  55 9999999999987 56678888888888888 999999999998


Q ss_pred             cCCcEEEeecceeeCCCCCc--chHHHHHHHHH-cCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC---CCCCceEEe
Q 025702          142 KGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLK-AGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE---KASRQVFNI  215 (249)
Q Consensus       142 ~~~~~~~~r~~~v~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~i  215 (249)
                      .+++++++||+.+||+....  .++..++..+. .+..+...+  ...++++|++|+|++++.+++++   ...+++||+
T Consensus       147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDH--WQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEEC--SSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred             hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeecc--CceECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence            88999999999999997542  34445566666 666655543  46789999999999999998753   235789999


Q ss_pred             cCCccccHHHHHHHHHHHhCCCcc
Q 025702          216 SGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       216 ~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      ++++.+|+.|+++.+.+.+|.+.+
T Consensus       225 ~~~~~~s~~e~~~~i~~~~g~~~~  248 (315)
T 2ydy_A          225 SGNEQMTKYEMACAIADAFNLPSS  248 (315)
T ss_dssp             CCSCCBCHHHHHHHHHHHTTCCCT
T ss_pred             cCCCcccHHHHHHHHHHHhCCChh
Confidence            999999999999999999997644

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=3.9e-32  Score=220.36  Aligned_cols=222  Identities=20%  Similarity=0.294  Sum_probs=178.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++|++|++++|........+.     .+. ...+++++.+|+.+..     +.  ++|+|||++
T Consensus        33 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~D~~~~~-----~~--~~d~vih~A   99 (343)
T 2b69_A           33 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----HWI-GHENFELINHDVVEPL-----YI--EVDQIYHLA   99 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-----GGT-TCTTEEEEECCTTSCC-----CC--CCSEEEECC
T ss_pred             EcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhh-----hhc-cCCceEEEeCccCChh-----hc--CCCEEEECc
Confidence            7999999999999999999999999997654221111     000 0257899999998753     44  899999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCC-----CCCCCCCcc-cchHHHH
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~-----~~~~~~~~~-~~k~~~e  136 (249)
                      +..                ..++.++++++.  +. +||++||..+|+.....+++|+     .+..|.+.| .+|..+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  178 (343)
T 2b69_A          100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE  178 (343)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHH
Confidence            853                224678888877  54 9999999999997766677776     345566667 9999999


Q ss_pred             HHHh----hcCCcEEEeecceeeCCCCC---cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          137 SVLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       137 ~~~~----~~~~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      .+++    +.+++++++||+++|||+..   ...+..++..+.++.++.+++++...++++|++|+|++++.+++.+.  
T Consensus       179 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--  256 (343)
T 2b69_A          179 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--  256 (343)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--
T ss_pred             HHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC--
Confidence            8864    45899999999999999743   34667777777788888777888889999999999999999998653  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          210 RQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       210 ~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      +++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       257 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  285 (343)
T 2b69_A          257 SSPVNLGNPEEHTILEFAQLIKNLVGSGS  285 (343)
T ss_dssp             CSCEEESCCCEEEHHHHHHHHHHHHTCCC
T ss_pred             CCeEEecCCCCCcHHHHHHHHHHHhCCCC
Confidence            67999999999999999999999999653

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.4e-32  Score=216.58  Aligned_cols=208  Identities=21%  Similarity=0.229  Sum_probs=163.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++||+|++++|++.+                 ..+   ..    .+.....++  ++|+|||++
T Consensus         6 TGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------~~~---~~----~~~~~~~l~--~~d~vihla   59 (298)
T 4b4o_A            6 GGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------GRI---TW----DELAASGLP--SCDAAVNLA   59 (298)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------TEE---EH----HHHHHHCCC--SCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------Cee---ec----chhhHhhcc--CCCEEEEec
Confidence            7999999999999999999999999998654                 111   11    122234555  999999998


Q ss_pred             CCC--------------------hhhhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHH
Q 025702           81 GRE--------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (249)
Q Consensus        81 ~~~--------------------~~~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (249)
                      +..                    +..+.++++++.    +..+||++||.++||.....+.+|+.+..+.+++ ..+...
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~  139 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKW  139 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHH
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHH
Confidence            742                    224566777644    4567999999999999888899999988888877 555555


Q ss_pred             HHHH--hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceE
Q 025702          136 ESVL--ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVF  213 (249)
Q Consensus       136 e~~~--~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~  213 (249)
                      |...  ...+++++++|++.+|||+.  ..+..+......+.. ...+++++.++|||++|+++++..+++++.. .++|
T Consensus       140 e~~~~~~~~~~~~~~~r~~~v~g~~~--~~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~y  215 (298)
T 4b4o_A          140 EAAARLPGDSTRQVVVRSGVVLGRGG--GAMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANHV-HGVL  215 (298)
T ss_dssp             HHHHCCSSSSSEEEEEEECEEECTTS--HHHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred             HHHHHhhccCCceeeeeeeeEEcCCC--CchhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCCC-CCeE
Confidence            5443  45678999999999999963  445555655555554 3448889999999999999999999998864 5599


Q ss_pred             EecCCccccHHHHHHHHHHHhCCCc
Q 025702          214 NISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       214 ~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      |+++++++|+.|+++.+++.+|+|.
T Consensus       216 n~~~~~~~t~~e~~~~ia~~lgrp~  240 (298)
T 4b4o_A          216 NGVAPSSATNAEFAQTFGAALGRRA  240 (298)
T ss_dssp             EESCSCCCBHHHHHHHHHHHHTCCC
T ss_pred             EEECCCccCHHHHHHHHHHHhCcCC
Confidence            9999999999999999999999653

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=5.6e-32  Score=222.42  Aligned_cols=234  Identities=17%  Similarity=0.149  Sum_probs=181.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccC-ceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS-KILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+||||++|+++|+++|++|++++|++.................... +++++.+|+.|.+.+.++++..++|+|||+
T Consensus        34 tGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~  113 (381)
T 1n7h_A           34 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL  113 (381)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            7999999999999999999999999998765211000000000000012 789999999999999999985568999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC--CCC-----eEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHH
Q 025702           80 NGRE----------------ADEVEPILDALP--NLE-----QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~--~~~-----~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (249)
                      ++..                +.++.++++++.  +++     +||++||..+||.... +++|+.+..|.+.| .+|..+
T Consensus       114 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~sK~~~  192 (381)
T 1n7h_A          114 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAA  192 (381)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHHHHHHH
Confidence            9863                234677888876  444     9999999999997666 88888888888888 999999


Q ss_pred             HHHHhh----cCCcEEEeecceeeCCCCCcch----HHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          136 ESVLES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       136 e~~~~~----~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                      |.+++.    .+++++++|++++|||+....+    +..++..+..+.. ....+++...++++|++|+|++++.+++++
T Consensus       193 E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  272 (381)
T 1n7h_A          193 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  272 (381)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence            988753    4889999999999999754332    3344445555543 334577788899999999999999999876


Q ss_pred             CCCCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          207 KASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      .  +++||+++++.+|+.|+++.+.+.+|.+
T Consensus       273 ~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~  301 (381)
T 1n7h_A          273 K--PDDYVVATEEGHTVEEFLDVSFGYLGLN  301 (381)
T ss_dssp             S--CCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred             C--CCeEEeeCCCCCcHHHHHHHHHHHcCCC
Confidence            5  4799999999999999999999999965

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-32  Score=223.22  Aligned_cols=234  Identities=20%  Similarity=0.175  Sum_probs=180.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+||||++++++|+++|++|++++|++.... ..+.. ..........+++++.+|++|.+++.++++..++|+|||+
T Consensus         7 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (372)
T 1db3_A            7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDH-IYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNL   85 (372)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHH-HhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            799999999999999999999999999865411 11110 0000000125788999999999999999985568999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC--CC---CeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHH
Q 025702           80 NGRE----------------ADEVEPILDALP--NL---EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~--~~---~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (249)
                      ++..                ..++.++++++.  ++   ++||++||..+|+.....+++|+.+..|.+.| .+|..+|.
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  165 (372)
T 1db3_A           86 GAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYW  165 (372)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHH
Confidence            8852                225677888876  55   79999999999998776788888888888888 99999998


Q ss_pred             HHh----hcCCcEEEeecceeeCCCCCcch----HHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          138 VLE----SKGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       138 ~~~----~~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      +++    +.+++++++|++++|||+....+    +..++..+..+.. ....+++.+.++++|++|+|++++.+++++. 
T Consensus       166 ~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~-  244 (372)
T 1db3_A          166 ITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ-  244 (372)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS-
T ss_pred             HHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC-
Confidence            874    35899999999999999754332    3445555556653 3445778889999999999999999998765 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          209 SRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       209 ~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                       +++||+++++.+|+.|+++.+.+.+|.+
T Consensus       245 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~  272 (372)
T 1db3_A          245 -PEDFVIATGVQYSVRQFVEMAAAQLGIK  272 (372)
T ss_dssp             -CCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred             -CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence             4799999999999999999999999964

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=7.1e-32  Score=218.83  Aligned_cols=228  Identities=19%  Similarity=0.202  Sum_probs=182.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++++++|+++|++|++++|++.....       ..+...  ..+++++.+|++|.+++.++++..++|+|||
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            9 TGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-------WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-------HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-------ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            7999999999999999999999999998764211       001110  2478999999999999999998556899999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CC-CeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHH
Q 025702           79 INGRE----------------ADEVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (249)
                      +|+..                +.++.++++++.  ++ ++||++||..+||.....+++|+.+..|.+.| .+|..+|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  161 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI  161 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence            99863                234777888876  65 89999999999998777788888888888888 999999988


Q ss_pred             Hhh----cCCcEEEeecceeeCCCCCcch----HHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          139 LES----KGVNWTSLRPVYIYGPLNYNPV----EEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       139 ~~~----~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      ++.    .+++++++|+.++|||+.....    +..++..+..+.. ....+++...++++|++|+|++++.+++++.  
T Consensus       162 ~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--  239 (345)
T 2z1m_A          162 TVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE--  239 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS--
T ss_pred             HHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC--
Confidence            743    4789999999999999754322    2333444455543 3345777788899999999999999998765  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          210 RQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       210 ~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      +++||+++++.+|+.|+++.+.+.+|.+
T Consensus       240 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~  267 (345)
T 2z1m_A          240 PDDYVIATGETHTVREFVEKAAKIAGFD  267 (345)
T ss_dssp             CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred             CceEEEeCCCCccHHHHHHHHHHHhCCC
Confidence            4799999999999999999999999975

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=1.2e-31  Score=215.22  Aligned_cols=218  Identities=16%  Similarity=0.112  Sum_probs=175.3

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++++++|+++  |++|++++|++...                .+++++.+|+.|.+++.++++..++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            5 TGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             ESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             EcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            799999999999999998  89999999876441                246788999999999999998668999999


Q ss_pred             cCCCC---------------hhhhHHHHHhCC--CCCeEEEeeccccccCC-CCCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           79 INGRE---------------ADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        79 ~~~~~---------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      +++..               ..++.++++++.  ++++||++||..+|+.. ...+..|+.+..|.+.| .+|..+|.++
T Consensus        69 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  148 (317)
T 3ajr_A           69 LAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLG  148 (317)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHH
Confidence            99863               234678888876  78899999999999864 33456677777788888 9999999876


Q ss_pred             h----hcCCcEEEeecceeeCCCCC-----cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC--
Q 025702          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA--  208 (249)
Q Consensus       140 ~----~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--  208 (249)
                      +    +.+++++++||+++||+...     .......+.....+..+..++++...++++|++|+|++++.+++++..  
T Consensus       149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~  228 (317)
T 3ajr_A          149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL  228 (317)
T ss_dssp             HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC
T ss_pred             HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccc
Confidence            4    45899999999999996421     122333333444455566667777889999999999999999987643  


Q ss_pred             -CCceEEecCCccccHHHHHHHHHHHhC
Q 025702          209 -SRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       209 -~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                       .+++||+++ ..+|+.|+++.+.+.+|
T Consensus       229 ~~g~~~~i~~-~~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          229 VLRNGYNVTA-YTFTPSELYSKIKERIP  255 (317)
T ss_dssp             SSCSCEECCS-EEECHHHHHHHHHTTCC
T ss_pred             ccCceEecCC-ccccHHHHHHHHHHHCC
Confidence             357999986 67999999999999998

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=5.7e-32  Score=236.52  Aligned_cols=225  Identities=20%  Similarity=0.226  Sum_probs=184.7

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHH-HHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF-VKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~-l~~~~~~~~~d~Vi~   78 (249)
                      ||||||||++++++|+++ |++|++++|++........          ..+++++.+|++|.++ +.++++  ++|+|||
T Consensus       321 TGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih  388 (660)
T 1z7e_A          321 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP  388 (660)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT----------CTTEEEEECCTTTCHHHHHHHHH--HCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc----------CCceEEEECCCCCcHHHHHHhhc--CCCEEEE
Confidence            799999999999999998 8999999998765322111          3578999999998764 777887  8999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCC-------CCCCcc-cch
Q 025702           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTV-------DPKSRH-KGK  132 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~-------~~~~~~-~~k  132 (249)
                      +|+..                ..++.++++++.  + ++||++||..+|+.....+++|+.+.       .|.+.| .+|
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK  467 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  467 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHH
Confidence            98853                235778888876  5 89999999999998766677777642       344457 999


Q ss_pred             HHHHHHHh----hcCCcEEEeecceeeCCCCC---------cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          133 LNTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       133 ~~~e~~~~----~~~~~~~~~r~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      ..+|.+++    +.+++++++||+++|||+..         ...+..++..+.++.++.+++++.+.++++|++|+|+++
T Consensus       468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai  547 (660)
T 1z7e_A          468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence            99999874    45899999999999999753         345677778888888887777778899999999999999


Q ss_pred             HHHhcCCC--CCCceEEecCCc-cccHHHHHHHHHHHhCCCc
Q 025702          200 VQVLGNEK--ASRQVFNISGEK-YVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~-~~s~~~l~~~~~~~~g~~~  238 (249)
                      +.+++++.  ..+++||+++++ .+|+.|+++.+.+.+|.+.
T Consensus       548 ~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~  589 (660)
T 1z7e_A          548 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  589 (660)
T ss_dssp             HHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCT
T ss_pred             HHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCC
Confidence            99998764  357899999986 8999999999999998654

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.98  E-value=7.6e-31  Score=212.66  Aligned_cols=225  Identities=16%  Similarity=0.105  Sum_probs=183.1

Q ss_pred             CCCcccchHHHHHHHHHcC-------CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEG-------HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~   73 (249)
                      |||+||||++++++|+++|       ++|++++|++..... ..          ..+++++.+|+.|.+.+.++++ .++
T Consensus        20 tGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~----------~~~~~~~~~Dl~d~~~~~~~~~-~~~   87 (342)
T 2hrz_A           20 IGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GF----------SGAVDARAADLSAPGEAEKLVE-ARP   87 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TC----------CSEEEEEECCTTSTTHHHHHHH-TCC
T ss_pred             ECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-cc----------CCceeEEEcCCCCHHHHHHHHh-cCC
Confidence            7999999999999999999       899999998654221 01          3578999999999999998884 389


Q ss_pred             cEEEecCCCC---------------hhhhHHHHHhCC--C-----CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           74 DVVYDINGRE---------------ADEVEPILDALP--N-----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        74 d~Vi~~~~~~---------------~~~~~~~~~a~~--~-----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      |+|||+|+..               +.++.++++++.  +     +++||++||..+|+.....+++|+.+..|.+.| .
T Consensus        88 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~  167 (342)
T 2hrz_A           88 DVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGT  167 (342)
T ss_dssp             SEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHH
T ss_pred             CEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHH
Confidence            9999999863               234677888876  4     789999999999997656788899888888888 9


Q ss_pred             chHHHHHHHhh----cCCcEEEeecceeeC-CCCC----cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          131 GKLNTESVLES----KGVNWTSLRPVYIYG-PLNY----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       131 ~k~~~e~~~~~----~~~~~~~~r~~~v~g-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      +|..+|.+++.    .+++.+++|++.+|| |+..    ..++..++.....+.+..++.++....+++|++|+|++++.
T Consensus       168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~  247 (342)
T 2hrz_A          168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIH  247 (342)
T ss_dssp             HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHH
Confidence            99999998753    368999999999998 6542    23566677777778776666666677889999999999999


Q ss_pred             HhcCCCC---CCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          202 VLGNEKA---SRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       202 ~~~~~~~---~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      +++.+..   .+++||++ ++.+|+.|+++.+.+.+|.+.
T Consensus       248 ~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~  286 (342)
T 2hrz_A          248 GAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKA  286 (342)
T ss_dssp             HHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHH
T ss_pred             HHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCccc
Confidence            9987642   46799996 577999999999999999643

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.98  E-value=5.3e-31  Score=215.29  Aligned_cols=225  Identities=20%  Similarity=0.231  Sum_probs=174.7

Q ss_pred             CCCcccchHHHHHHHHHcC-----CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCC-Cc
Q 025702            1 MGGTRFIGVFLSRLLVKEG-----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG-FD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~-~d   74 (249)
                      ||||||+|++++++|+++|     ++|++++|++....  ..          ..+++++.+|++|.+.+.++++..+ +|
T Consensus         7 tGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~~----------~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            7 VGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--HE----------DNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             ETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--CC----------SSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--cc----------cCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            7999999999999999999     99999999876532  11          3578999999999999999998333 99


Q ss_pred             EEEecCCCC-----------hhhhHHHHHhCC----CCCeEE-------EeeccccccCC--CCCCCCCCCCCCC-CCcc
Q 025702           75 VVYDINGRE-----------ADEVEPILDALP----NLEQFI-------YCSSAGVYLKS--DLLPHCETDTVDP-KSRH  129 (249)
Q Consensus        75 ~Vi~~~~~~-----------~~~~~~~~~a~~----~~~~~i-------~~Ss~~v~~~~--~~~~~~e~~~~~~-~~~~  129 (249)
                      +|||+++..           ..++.++++++.    ++++||       |+||..+||..  ...+++|+.+..| .+.|
T Consensus        75 ~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y  154 (364)
T 2v6g_A           75 HVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY  154 (364)
T ss_dssp             EEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH
T ss_pred             EEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh
Confidence            999999852           346888999876    378997       79999999874  3456778776554 3444


Q ss_pred             cchHHHHHHH----hhcC-CcEEEeecceeeCCCCCc--c-hHHH-HHHHH--HcCCCeeecCCCc---ceEeeeeHHHH
Q 025702          130 KGKLNTESVL----ESKG-VNWTSLRPVYIYGPLNYN--P-VEEW-FFHRL--KAGRPIPIPGSGI---QVTQLGHVKDL  195 (249)
Q Consensus       130 ~~k~~~e~~~----~~~~-~~~~~~r~~~v~g~~~~~--~-~~~~-~~~~~--~~~~~~~~~~~~~---~~~~~i~~~D~  195 (249)
                         ..+|+++    ++.+ ++++++||+++|||+...  . ..+. +...+  ..+.++.+++++.   ...++++++|+
T Consensus       155 ---~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dv  231 (364)
T 2v6g_A          155 ---YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI  231 (364)
T ss_dssp             ---HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHH
T ss_pred             ---HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHH
Confidence               2355544    3355 999999999999997542  2 2333 33334  3677766667763   44788999999


Q ss_pred             HHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCCccc
Q 025702          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAG  240 (249)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~  240 (249)
                      |++++.+++++...+++||+++++.+|+.|+++.+++.+|.+...
T Consensus       232 a~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  276 (364)
T 2v6g_A          232 AEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGE  276 (364)
T ss_dssp             HHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCC
T ss_pred             HHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCC
Confidence            999999999875567899999999999999999999999976443

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.98  E-value=7e-32  Score=213.63  Aligned_cols=206  Identities=19%  Similarity=0.212  Sum_probs=166.0

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||+|++++++|+++  |++|++++|++.+...         +.  ..+++++.+|++|.+.+.++++  ++|+|||
T Consensus         6 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~   72 (287)
T 2jl1_A            6 TGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST---------LA--DQGVEVRHGDYNQPESLQKAFA--GVSKLLF   72 (287)
T ss_dssp             TTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH---------HH--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH---------Hh--hcCCeEEEeccCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999998  9999999998654211         00  2478899999999999999998  8999999


Q ss_pred             cCCC------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEee
Q 025702           79 INGR------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (249)
Q Consensus        79 ~~~~------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r  150 (249)
                      +++.      +..++.+++++++  ++++||++||..++.             .|..|..+|..+|.++++.+++++++|
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~~K~~~E~~~~~~~~~~~ilr  139 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-------------SIIPLAHVHLATEYAIRTTNIPYTFLR  139 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-------------CCSTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CCCchHHHHHHHHHHHHHcCCCeEEEE
Confidence            9986      4567889999987  788999999998862             122344999999999999999999999


Q ss_pred             cceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHH
Q 025702          151 PVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARAC  230 (249)
Q Consensus       151 ~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~  230 (249)
                      |+.++|+... .++   ......+. .. ...++..++++|++|+|++++.+++++...+++||+++++.+|+.|+++.+
T Consensus       140 p~~~~~~~~~-~~~---~~~~~~~~-~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i  213 (287)
T 2jl1_A          140 NALYTDFFVN-EGL---RASTESGA-IV-TNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQIL  213 (287)
T ss_dssp             ECCBHHHHSS-GGG---HHHHHHTE-EE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHH
T ss_pred             CCEeccccch-hhH---HHHhhCCc-ee-ccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHH
Confidence            9988876311 121   12222333 22 244566789999999999999999886556789999999999999999999


Q ss_pred             HHHhCCCc
Q 025702          231 AKVTGYCI  238 (249)
Q Consensus       231 ~~~~g~~~  238 (249)
                      .+.+|.+.
T Consensus       214 ~~~~g~~~  221 (287)
T 2jl1_A          214 SEVSGKKV  221 (287)
T ss_dssp             HHHHSSCC
T ss_pred             HHHHCCcc
Confidence            99999653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.7e-31  Score=223.18  Aligned_cols=238  Identities=15%  Similarity=0.131  Sum_probs=178.7

Q ss_pred             CCCcccchHHHHHHHHHc---CCeEEEEecCCCcccc------CCCCCCc----hhhhhccCceEEEEeccC------CH
Q 025702            1 MGGTRFIGVFLSRLLVKE---GHQVTLFTRGKAPIAQ------QLPGESD----QEFAEFSSKILHLKGDRK------DY   61 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~---g~~v~~~~r~~~~~~~------~~~~~~~----~~~~~~~~~v~~~~~d~~------d~   61 (249)
                      ||||||||++|+++|++.   |++|++++|++.....      .+.....    ........+++++.+|++      |.
T Consensus        79 TGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~  158 (478)
T 4dqv_A           79 TGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQ  158 (478)
T ss_dssp             ECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCH
T ss_pred             ECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCH
Confidence            799999999999999999   8999999998764210      0000000    000011368999999998      66


Q ss_pred             HHHHHhhhhCCCcEEEecCCC------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           62 DFVKSSLSAKGFDVVYDINGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        62 ~~l~~~~~~~~~d~Vi~~~~~------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +.+.++++  ++|+|||+++.            |+.++.++++++.  ++++|||+||..+|+.....++.|+.+..|.+
T Consensus       159 ~~~~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~  236 (478)
T 4dqv_A          159 PMWRRLAE--TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVIS  236 (478)
T ss_dssp             HHHHHHHH--HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHC
T ss_pred             HHHHHHHc--CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccC
Confidence            78999998  99999999986            3457889999977  78899999999999987777777776554332


Q ss_pred             c-----------c-cchHHHHHHHhh----cCCcEEEeecceeeCCCC------CcchHHHHHHHHHcCCCee--ecCC-
Q 025702          128 R-----------H-KGKLNTESVLES----KGVNWTSLRPVYIYGPLN------YNPVEEWFFHRLKAGRPIP--IPGS-  182 (249)
Q Consensus       128 ~-----------~-~~k~~~e~~~~~----~~~~~~~~r~~~v~g~~~------~~~~~~~~~~~~~~~~~~~--~~~~-  182 (249)
                      .           | .+|..+|.+++.    .+++++++||++|||+..      ...++..++.........+  ++.. 
T Consensus       237 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~  316 (478)
T 4dqv_A          237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPD  316 (478)
T ss_dssp             CEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCC
T ss_pred             cccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccc
Confidence            2           6 999999998854    489999999999999853      1234555555444333222  1111 


Q ss_pred             -----CcceEeeeeHHHHHHHHHHHhcC----CCCCCceEEecCCcc--ccHHHHHHHHHHHhCCCcccc
Q 025702          183 -----GIQVTQLGHVKDLARAFVQVLGN----EKASRQVFNISGEKY--VTFDGLARACAKVTGYCIAGS  241 (249)
Q Consensus       183 -----~~~~~~~i~~~D~a~~~~~~~~~----~~~~~~~~~i~~~~~--~s~~~l~~~~~~~~g~~~~~~  241 (249)
                           ++..++++|++|+|++++.++.+    +...+++||+++++.  +|+.|+++++.+. |.+.+.+
T Consensus       317 ~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i  385 (478)
T 4dqv_A          317 SEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRI  385 (478)
T ss_dssp             TTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEEE
T ss_pred             cccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCcccC
Confidence                 15678999999999999999976    455678999999988  9999999999996 7665444

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=1e-31  Score=205.63  Aligned_cols=201  Identities=20%  Similarity=0.190  Sum_probs=157.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||||++|++++++|+++|++|++++|++.+... +           ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   75 (227)
T 3dhn_A           10 IGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-E-----------NEHLKVKKADVSSLDEVCEVCK--GADAVISAF   75 (227)
T ss_dssp             ETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-C-----------CTTEEEECCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-c-----------cCceEEEEecCCCHHHHHHHhc--CCCEEEEeC
Confidence            6999999999999999999999999999766322 1           2589999999999999999998  899999999


Q ss_pred             CCC----------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH---h-hcC
Q 025702           81 GRE----------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL---E-SKG  143 (249)
Q Consensus        81 ~~~----------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~---~-~~~  143 (249)
                      +..          ..++.+++++++  ++++||++||.++|...... ..++.+..|.+.| .+|..+|.++   . +.+
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  154 (227)
T 3dhn_A           76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGEFYLNFLMKEKE  154 (227)
T ss_dssp             CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCS
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHHHHHHHHhhccC
Confidence            863          557888999987  78899999999987643322 2345566677778 9999999554   3 568


Q ss_pred             CcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccH
Q 025702          144 VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTF  223 (249)
Q Consensus       144 ~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~  223 (249)
                      ++++++||+++|||+......       ..+....+... .. ++++|++|+|++++.+++++...+++|+++++++.+|
T Consensus       155 ~~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~~~~-~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~  225 (227)
T 3dhn_A          155 IDWVFFSPAADMRPGVRTGRY-------RLGKDDMIVDI-VG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHH  225 (227)
T ss_dssp             SEEEEEECCSEEESCCCCCCC-------EEESSBCCCCT-TS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC-
T ss_pred             ccEEEEeCCcccCCCccccce-------eecCCCcccCC-CC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhccc
Confidence            999999999999997533211       11222222222 22 7999999999999999999988899999999999887


Q ss_pred             HH
Q 025702          224 DG  225 (249)
Q Consensus       224 ~~  225 (249)
                      .+
T Consensus       226 ~~  227 (227)
T 3dhn_A          226 HH  227 (227)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=3.1e-31  Score=209.74  Aligned_cols=205  Identities=20%  Similarity=0.216  Sum_probs=163.0

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||||++|++++++|+++  |++|++++|++.+...         +.  ..+++++.+|++|.+++.++++  ++|+|||
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------~~--~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   71 (286)
T 2zcu_A            5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA---------LA--AQGITVRQADYGDEAALTSALQ--GVEKLLL   71 (286)
T ss_dssp             ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH---------HH--HTTCEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh---------hh--cCCCeEEEcCCCCHHHHHHHHh--CCCEEEE
Confidence            799999999999999998  9999999998654211         00  2478899999999999999998  8999999


Q ss_pred             cCCC----ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEeecc
Q 025702           79 INGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPV  152 (249)
Q Consensus        79 ~~~~----~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r~~  152 (249)
                      +++.    +...+.+++++++  ++++||++||..+|.             .|..|..+|..+|.++++.+++++++||+
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~~~y~~sK~~~e~~~~~~~~~~~ilrp~  138 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SPLGLADEHIETEKMLADSGIVYTLLRNG  138 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CCSTTHHHHHHHHHHHHHHCSEEEEEEEC
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CcchhHHHHHHHHHHHHHcCCCeEEEeCh
Confidence            9985    3567899999987  789999999988861             12234499999999999899999999998


Q ss_pred             eeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHH
Q 025702          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAK  232 (249)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~  232 (249)
                      .++++.     . .++.....+..+. .+.++..++++|++|+|++++.+++++...++.||+++++.+|+.|+++.+.+
T Consensus       139 ~~~~~~-----~-~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~  211 (286)
T 2zcu_A          139 WYSENY-----L-ASAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTK  211 (286)
T ss_dssp             CBHHHH-----H-TTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHH
T ss_pred             HHhhhh-----H-HHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHH
Confidence            766642     1 1122222223343 34566788999999999999999988655688999999999999999999999


Q ss_pred             HhCCCc
Q 025702          233 VTGYCI  238 (249)
Q Consensus       233 ~~g~~~  238 (249)
                      .+|.+.
T Consensus       212 ~~g~~~  217 (286)
T 2zcu_A          212 QSGKQV  217 (286)
T ss_dssp             HHSSCC
T ss_pred             HHCCCC
Confidence            999653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=5.9e-31  Score=213.19  Aligned_cols=228  Identities=14%  Similarity=0.087  Sum_probs=173.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEE-EeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHL-KGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~-~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++++++|+++|++|++++|+...... +.    ..+.. ...+++++ .+|++|.+.+.++++  ++|+|||
T Consensus        17 TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih   89 (342)
T 1y1p_A           17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-LQ----KRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAH   89 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH----HHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHH-HH----HHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEEEE
Confidence            7999999999999999999999999997644210 00    00000 02468888 799999999999998  9999999


Q ss_pred             cCCCC-------------hhhhHHHHHhCC---CCCeEEEeeccccccCCCC----CCCCCCC----------------C
Q 025702           79 INGRE-------------ADEVEPILDALP---NLEQFIYCSSAGVYLKSDL----LPHCETD----------------T  122 (249)
Q Consensus        79 ~~~~~-------------~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~----~~~~e~~----------------~  122 (249)
                      +|+..             ..++.++++++.   ++++||++||..+|+....    .+++|+.                +
T Consensus        90 ~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~  169 (342)
T 1y1p_A           90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP  169 (342)
T ss_dssp             CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred             eCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccccc
Confidence            99853             345788888864   5789999999999864321    4566665                1


Q ss_pred             CCCCCcc-cchHHHHHHHhhc------CCcEEEeecceeeCCCCCc----chHHHHHHHHHcCCCeeecCCCcceEeeee
Q 025702          123 VDPKSRH-KGKLNTESVLESK------GVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~~~------~~~~~~~r~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                      ..|.+.| .+|..+|.+++..      +++++++||+++|||....    .....++..+.++....+.+++ ..++++|
T Consensus       170 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~  248 (342)
T 1y1p_A          170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVS  248 (342)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeE
Confidence            2344557 9999999987432      6889999999999997432    2667777788787776544544 5689999


Q ss_pred             HHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhCCC
Q 025702          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      ++|+|++++.+++++...++.+ +.++..+|+.|+++.+.+.+|.+
T Consensus       249 v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          249 AVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred             HHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence            9999999999998765445555 45567899999999999999964

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.97  E-value=2.5e-30  Score=227.70  Aligned_cols=234  Identities=20%  Similarity=0.242  Sum_probs=179.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+||||++|+++|+++|++|++++|.........     ..+.. ...+++++.+|+.|.+.+.++++..++|+|||+
T Consensus        17 TGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~   91 (699)
T 1z45_A           17 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV-----ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   91 (699)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH-----HHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH-----HHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999765421100     00110 135788999999999999999986689999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCC----CCCCCCCCCCCCCCcc-cchHHHH
Q 025702           80 NGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~----~~~~~e~~~~~~~~~~-~~k~~~e  136 (249)
                      |+..                +.++.+++++++  ++++||++||..+|+...    ..+++|+.+..|.+.| .+|..+|
T Consensus        92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  171 (699)
T 1z45_A           92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  171 (699)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHH
Confidence            9863                234677888876  788999999999998532    2567777777788888 9999999


Q ss_pred             HHHhh------cCCcEEEeecceeeCCCCC-----------cchHHHHHHHHHc-CCCeeecC------CCcceEeeeeH
Q 025702          137 SVLES------KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIPG------SGIQVTQLGHV  192 (249)
Q Consensus       137 ~~~~~------~~~~~~~~r~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~  192 (249)
                      .+++.      .+++++++||+++|||...           ..+++.+...... +.++.+++      ++.+.++++|+
T Consensus       172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  251 (699)
T 1z45_A          172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  251 (699)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence            98753      5899999999999998521           2344444333332 24555555      56788999999


Q ss_pred             HHHHHHHHHHhcCC------CCCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          193 KDLARAFVQVLGNE------KASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       193 ~D~a~~~~~~~~~~------~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      +|+|++++.++++.      ...+++||+++++.+|+.|+++.+++.+|.+.+
T Consensus       252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~  304 (699)
T 1z45_A          252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP  304 (699)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCC
Confidence            99999999998642      223579999999999999999999999997543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=6e-30  Score=202.72  Aligned_cols=204  Identities=16%  Similarity=0.185  Sum_probs=162.3

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||||++|+++++.|++. |++|++++|++.+.... .          ..+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~----------~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~   72 (289)
T 3e48_A            6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-W----------RGKVSVRQLDYFNQESMVEAFK--GMDTVVFI   72 (289)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-G----------BTTBEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-h----------hCCCEEEEcCCCCHHHHHHHHh--CCCEEEEe
Confidence            799999999999999998 99999999997763221 1          3689999999999999999998  99999999


Q ss_pred             CCCC------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEeec
Q 025702           80 NGRE------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRP  151 (249)
Q Consensus        80 ~~~~------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r~  151 (249)
                      ++..      ...+++++++++  ++++||++||.+.   .         ...|......+..+|..+++.+++++++||
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~---------~~~~~~~~~~~~~~e~~~~~~g~~~~ilrp  140 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---Q---------HNNPFHMSPYFGYASRLLSTSGIDYTYVRM  140 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---S---------TTCCSTTHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---C---------CCCCCccchhHHHHHHHHHHcCCCEEEEec
Confidence            9863      356788999987  7899999999542   1         111222223345678888889999999999


Q ss_pred             ceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHH
Q 025702          152 VYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (249)
Q Consensus       152 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~  231 (249)
                      ++++|+.     .. ++.....+... ..+.++..+++++++|+|++++.++.++...+++|+++ ++.+|+.|+++.+.
T Consensus       141 ~~~~~~~-----~~-~~~~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~  212 (289)
T 3e48_A          141 AMYMDPL-----KP-YLPELMNMHKL-IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILS  212 (289)
T ss_dssp             CEESTTH-----HH-HHHHHHHHTEE-CCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHH
T ss_pred             ccccccc-----HH-HHHHHHHCCCE-ecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHH
Confidence            9999982     22 23333333322 33556788999999999999999999877668899999 99999999999999


Q ss_pred             HHhCCC
Q 025702          232 KVTGYC  237 (249)
Q Consensus       232 ~~~g~~  237 (249)
                      +.+|.+
T Consensus       213 ~~~g~~  218 (289)
T 3e48_A          213 EASGTE  218 (289)
T ss_dssp             HHHTSC
T ss_pred             HHHCCc
Confidence            999965

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.97  E-value=5.6e-31  Score=219.54  Aligned_cols=228  Identities=17%  Similarity=0.193  Sum_probs=175.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcccc--CCCCCCch-----hhhhccCceEEEEeccCCHHHHHHhhhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~--~~~~~~~~-----~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~   73 (249)
                      ||||||||++|+++|++.|++|++++|++.....  .+......     .......+++++.+|+.|.+.+. .+.  ++
T Consensus        75 TGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  151 (427)
T 4f6c_A           75 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  151 (427)
T ss_dssp             ECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CSS--CC
T ss_pred             ecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-CcC--CC
Confidence            7999999999999999999999999999873110  00000000     00112468999999999988777 444  99


Q ss_pred             cEEEecCCC-------------ChhhhHHHHHhCC-CCCeEEEeeccccccC-----CCCCCCCCCCC---CCCCCcc-c
Q 025702           74 DVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K  130 (249)
Q Consensus        74 d~Vi~~~~~-------------~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~---~~~~~~~-~  130 (249)
                      |+|||+|+.             |+.++.++++++. +.++||++||..+ |.     ....+++|+.+   ..+.+.| .
T Consensus       152 d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  230 (427)
T 4f6c_A          152 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  230 (427)
T ss_dssp             SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHH
T ss_pred             CEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHH
Confidence            999999986             3446788999887 7899999999999 53     23456677765   4466778 9


Q ss_pred             chHHHHHHHhh---cCCcEEEeecceeeCCCCCc--------chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       131 ~k~~~e~~~~~---~~~~~~~~r~~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      +|+.+|.+++.   .+++++++||++|||+....        ..+..++........++. +.++..+++++++|+|+++
T Consensus       231 sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai  309 (427)
T 4f6c_A          231 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  309 (427)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHH
Confidence            99999998865   78999999999999997543        236667777777776654 3356789999999999999


Q ss_pred             HHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +.++..+. .+++||+++++++++.|+++.+.+ +|
T Consensus       310 ~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          310 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             HHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             HHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            99999877 788999999999999999999998 55

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=1.8e-30  Score=210.84  Aligned_cols=222  Identities=16%  Similarity=0.191  Sum_probs=175.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||||++|++|+++|++.|++|++++|++........     .+. ....+++++.+|+.|.+++.++++..++|+|||+
T Consensus        16 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-----~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           16 AGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-----IFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-----HHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-----HHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            6999999999999999999999999998733111000     000 0136899999999999999999987799999999


Q ss_pred             CCC-ChhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhcCCcEEEeeccee
Q 025702           80 NGR-EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYI  154 (249)
Q Consensus        80 ~~~-~~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~~~r~~~v  154 (249)
                      ++. +...+.+++++++  + +++||+ |   +||.    ..+|..+..|...| .+|..+|+++++.+++++++||+++
T Consensus        91 a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~  162 (346)
T 3i6i_A           91 VGGESILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSI  162 (346)
T ss_dssp             CCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEE
T ss_pred             CchhhHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEeccc
Confidence            986 6778999999987  6 889886 3   3442    23455555666666 9999999999999999999999999


Q ss_pred             eCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecC-CccccHHHHHHHHHHH
Q 025702          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKV  233 (249)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~l~~~~~~~  233 (249)
                      +|........ . ......+..+.++++++..+++++++|+|++++.++.++...++.|++.+ ++.+|+.|+++.+.+.
T Consensus       163 ~g~~~~~~~~-~-~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~  240 (346)
T 3i6i_A          163 ASWPYYNNIH-P-SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKK  240 (346)
T ss_dssp             SSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHH
T ss_pred             ccccCccccc-c-ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHH
Confidence            9975322111 1 11122455677888888999999999999999999999876678999985 5889999999999999


Q ss_pred             hCCC
Q 025702          234 TGYC  237 (249)
Q Consensus       234 ~g~~  237 (249)
                      +|.+
T Consensus       241 ~g~~  244 (346)
T 3i6i_A          241 IGRT  244 (346)
T ss_dssp             HTSC
T ss_pred             HCCC
Confidence            9965

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=1.4e-30  Score=221.43  Aligned_cols=228  Identities=17%  Similarity=0.192  Sum_probs=177.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcccc--CCCCCCch-----hhhhccCceEEEEeccCCHHHHHHhhhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQ-----EFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~--~~~~~~~~-----~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~   73 (249)
                      ||||||||++|+++|++.|++|++++|++.+...  .+......     .......+++++.+|+.|.+.+. ...  ++
T Consensus       156 TGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~--~~  232 (508)
T 4f6l_B          156 TGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LPE--NM  232 (508)
T ss_dssp             SCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CSS--CC
T ss_pred             ECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Ccc--CC
Confidence            7999999999999999999999999999873110  00000000     00112468999999999977777 444  99


Q ss_pred             cEEEecCCC-------------ChhhhHHHHHhCC-CCCeEEEeeccccccC-----CCCCCCCCCCC---CCCCCcc-c
Q 025702           74 DVVYDINGR-------------EADEVEPILDALP-NLEQFIYCSSAGVYLK-----SDLLPHCETDT---VDPKSRH-K  130 (249)
Q Consensus        74 d~Vi~~~~~-------------~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~-----~~~~~~~e~~~---~~~~~~~-~  130 (249)
                      |+|||+++.             |+.++.++++++. +.++|||+||..+ |.     ....+++|+++   ..|.+.| .
T Consensus       233 D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~  311 (508)
T 4f6l_B          233 DTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTR  311 (508)
T ss_dssp             SEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHHHH
T ss_pred             CEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcHHH
Confidence            999999985             3456888999977 7889999999999 43     23456667765   3466777 9


Q ss_pred             chHHHHHHHhh---cCCcEEEeecceeeCCCCCc--------chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          131 GKLNTESVLES---KGVNWTSLRPVYIYGPLNYN--------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       131 ~k~~~e~~~~~---~~~~~~~~r~~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      +|+.+|.+++.   .+++++++||++|||+....        ..+..++........++. +.++..+++++++|+|+++
T Consensus       312 sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai  390 (508)
T 4f6l_B          312 SKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQI  390 (508)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHH
Confidence            99999998864   78999999999999996433        235666777766665554 3457889999999999999


Q ss_pred             HHHhcCCCCCCceEEecCCccccHHHHHHHHHHHh
Q 025702          200 VQVLGNEKASRQVFNISGEKYVTFDGLARACAKVT  234 (249)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~  234 (249)
                      +.++.++. .+++||+++++.+++.|+++.+.+..
T Consensus       391 ~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          391 VALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             HHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             HHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            99998876 68899999999999999999999754

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.97  E-value=1.8e-29  Score=198.36  Aligned_cols=207  Identities=19%  Similarity=0.150  Sum_probs=170.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|++|++++++|++ |++|++++|++...                .+   +.+|++|.+.+.++++..++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a   65 (273)
T 2ggs_A            6 TGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA   65 (273)
T ss_dssp             ETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence            79999999999999995 89999999986420                12   789999999999999844699999999


Q ss_pred             CCCh----------------hhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           81 GREA----------------DEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        81 ~~~~----------------~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +...                .++.++++++. ...+||++||..+|+.... ++.|+.+..|.+.| .+|..+|.+++. 
T Consensus        66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~-  143 (273)
T 2ggs_A           66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ-  143 (273)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC-
T ss_pred             cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC-
Confidence            8632                34677888876 3239999999999976543 77888888888888 999999999877 


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                       ++++++||+.+||+   ..+...+......+..+...++   .+++++++|+|++++.+++++.  +++||+++ +.+|
T Consensus       144 -~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~~~s  213 (273)
T 2ggs_A          144 -DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG-ERIS  213 (273)
T ss_dssp             -TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-CCEE
T ss_pred             -CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-Cccc
Confidence             88999999999984   3455556666667777666554   7899999999999999998764  45999999 9999


Q ss_pred             HHHHHHHHHHHhCCCcc
Q 025702          223 FDGLARACAKVTGYCIA  239 (249)
Q Consensus       223 ~~~l~~~~~~~~g~~~~  239 (249)
                      +.|+++.+.+.+|.+.+
T Consensus       214 ~~e~~~~~~~~~g~~~~  230 (273)
T 2ggs_A          214 RFELALKIKEKFNLPGE  230 (273)
T ss_dssp             HHHHHHHHHHHTTCCSC
T ss_pred             HHHHHHHHHHHhCCChh
Confidence            99999999999997644

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.97  E-value=1.7e-30  Score=197.89  Aligned_cols=192  Identities=15%  Similarity=0.173  Sum_probs=158.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||||++|++++++|+++|++|++++|++.+...             ..+++++.+|++| .+++.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~   70 (219)
T 3dqp_A            6 VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-------------YNNVKAVHFDVDWTPEEMAKQLH--GMDAIINV   70 (219)
T ss_dssp             ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-------------CTTEEEEECCTTSCHHHHHTTTT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-------------cCCceEEEecccCCHHHHHHHHc--CCCEEEEC
Confidence            7999999999999999999999999999765321             1579999999999 999999998  99999999


Q ss_pred             CCC--------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH-hhcCCcEE
Q 025702           80 NGR--------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL-ESKGVNWT  147 (249)
Q Consensus        80 ~~~--------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~-~~~~~~~~  147 (249)
                      ++.        +..++.+++++++  ++++||++||..+++..   +..| .+..|.+.| .+|..+|+++ +..+++++
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~  146 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYLTKETNLDYT  146 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHHHhccCCcEE
Confidence            986        4556889999987  77899999998877543   2223 334456667 9999999999 78899999


Q ss_pred             EeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHHHH
Q 025702          148 SLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLA  227 (249)
Q Consensus       148 ~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~  227 (249)
                      ++||+++||+.....+              .+   +...+++++++|+|++++.+++++...+++|+++++. .++.|++
T Consensus       147 ilrp~~v~g~~~~~~~--------------~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~  208 (219)
T 3dqp_A          147 IIQPGALTEEEATGLI--------------DI---NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEAL  208 (219)
T ss_dssp             EEEECSEECSCCCSEE--------------EE---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHH
T ss_pred             EEeCceEecCCCCCcc--------------cc---CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHH
Confidence            9999999998542221              11   2456799999999999999999987678899998875 9999887


Q ss_pred             HH
Q 025702          228 RA  229 (249)
Q Consensus       228 ~~  229 (249)
                      +.
T Consensus       209 ~~  210 (219)
T 3dqp_A          209 ES  210 (219)
T ss_dssp             HT
T ss_pred             HH
Confidence            64

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=2.1e-29  Score=206.28  Aligned_cols=189  Identities=17%  Similarity=0.180  Sum_probs=162.0

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      ||||||+|++|+++|+++|+ +|+.++|+                              .|.+.+.++++  ++|+|||+
T Consensus         6 tGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------~d~~~l~~~~~--~~d~Vih~   53 (369)
T 3st7_A            6 TGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------TKEEELESALL--KADFIVHL   53 (369)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------CCHHHHHHHHH--HCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------CCHHHHHHHhc--cCCEEEEC
Confidence            79999999999999999998 77776553                              56788889998  89999999


Q ss_pred             CCC------------ChhhhHHHHHhCC--CCC-eEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh--
Q 025702           80 NGR------------EADEVEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES--  141 (249)
Q Consensus        80 ~~~------------~~~~~~~~~~a~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~--  141 (249)
                      ++.            +..++.+++++++  +++ +||++||..+|+               .+.| .+|..+|++++.  
T Consensus        54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~~E~~~~~~~  118 (369)
T 3st7_A           54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGEQLLREYA  118 (369)
T ss_dssp             CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------CCCchHHHHHHHHHHHHHH
Confidence            875            4556899999987  555 999999999985               3456 999999998865  


Q ss_pred             --cCCcEEEeecceeeCCCCC---cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCC-CceEEe
Q 025702          142 --KGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS-RQVFNI  215 (249)
Q Consensus       142 --~~~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~-~~~~~i  215 (249)
                        .+++++++||+++||++..   ..+++.++..+..+.++.+ +++...++++|++|+|++++.+++++... +++||+
T Consensus       119 ~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i  197 (369)
T 3st7_A          119 EEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTV  197 (369)
T ss_dssp             HHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECC
T ss_pred             HHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEe
Confidence              7899999999999999643   3578888888888887766 46778899999999999999999987654 789999


Q ss_pred             cCCccccHHHHHHHHHHHhCCC
Q 025702          216 SGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       216 ~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      ++++.+|+.|+++.+.+.+|.+
T Consensus       198 ~~~~~~s~~e~~~~~~~~~g~~  219 (369)
T 3st7_A          198 PNVFKVTLGEIVDLLYKFKQSR  219 (369)
T ss_dssp             SCCEEEEHHHHHHHHHHHHHHH
T ss_pred             CCCCceeHHHHHHHHHHHhCCC
Confidence            9999999999999999999865

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.96  E-value=4.8e-30  Score=218.35  Aligned_cols=210  Identities=14%  Similarity=0.092  Sum_probs=161.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|++.|+++|++|++++|++.+.                .   .+.+|+.+.  +.+.++  ++|+|||++
T Consensus       153 TGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~---~v~~d~~~~--~~~~l~--~~D~Vih~A  209 (516)
T 3oh8_A          153 TGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------G---KRFWDPLNP--ASDLLD--GADVLVHLA  209 (516)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------T---CEECCTTSC--CTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------c---ceeecccch--hHHhcC--CCCEEEECC
Confidence            79999999999999999999999999987652                1   145677643  355666  999999998


Q ss_pred             CC-----------------ChhhhHHHHHh-CC--CCCeEEEeecccccc-CCCCCCCCCCCCCCCCCcc-cchHHHHHH
Q 025702           81 GR-----------------EADEVEPILDA-LP--NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (249)
Q Consensus        81 ~~-----------------~~~~~~~~~~a-~~--~~~~~i~~Ss~~v~~-~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (249)
                      +.                 |+.++.+++++ ++  ++++||++||.++|| .....+++|+.+. +.++| ..|...|.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~  288 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHA  288 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHT
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHH
Confidence            85                 23457889998 44  788999999999998 4555567777766 66666 777777765


Q ss_pred             H---hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEe
Q 025702          139 L---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI  215 (249)
Q Consensus       139 ~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i  215 (249)
                      +   +..+++++++||+++|||+.  ..+..+...+..+.. ...+++.+.++++|++|+|++++.+++++.. ++.||+
T Consensus       289 ~~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~ni  364 (516)
T 3oh8_A          289 TAPASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPINA  364 (516)
T ss_dssp             THHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEEEE
T ss_pred             HHHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcEEE
Confidence            4   46789999999999999963  455555555544443 3457888899999999999999999998763 569999


Q ss_pred             cCCccccHHHHHHHHHHHhCCCc
Q 025702          216 SGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       216 ~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      ++++.+|+.|+++.+++.+|.+.
T Consensus       365 ~~~~~~s~~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          365 VAPNPVSNADMTKILATSMHRPA  387 (516)
T ss_dssp             SCSCCEEHHHHHHHTTC------
T ss_pred             ECCCCCCHHHHHHHHHHHhCCCC
Confidence            99999999999999999999653

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=1.1e-28  Score=199.86  Aligned_cols=207  Identities=17%  Similarity=0.230  Sum_probs=167.6

Q ss_pred             CCCcccchHHHHHHHHHc-CC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE-GH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||||++|++++++|++. |+ +|++++|++.+.....     ..+  ...+++++.+|++|.+.+.++++  ++|+|||
T Consensus        27 TGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~-----~~~--~~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vih   97 (344)
T 2gn4_A           27 TGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMA-----MEF--NDPRMRFFIGDVRDLERLNYALE--GVDICIH   97 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHH-----HHH--CCTTEEEEECCTTCHHHHHHHTT--TCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHH-----HHh--cCCCEEEEECCCCCHHHHHHHHh--cCCEEEE
Confidence            799999999999999999 97 9999999865421100     000  02579999999999999999998  9999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      +|+..                +.++.++++++.  ++++||++||..++              .|.+.| .+|..+|.++
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLCSDKLF  163 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHHHHHHH
Confidence            99863                234678898876  78999999997763              245667 9999999987


Q ss_pred             hh-------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCC-CeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCc
Q 025702          140 ES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (249)
Q Consensus       140 ~~-------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (249)
                      +.       .+++++++||+++||+.  ...++.+...+..+. ++.+. ++...++++|++|+|++++.+++++. .++
T Consensus       164 ~~~~~~~~~~g~~~~~vRpg~v~g~~--~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~  239 (344)
T 2gn4_A          164 VSANNFKGSSQTQFSVVRYGNVVGSR--GSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GGE  239 (344)
T ss_dssp             HHGGGCCCSSCCEEEEECCCEETTCT--TSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SSC
T ss_pred             HHHHHHhCCCCcEEEEEEeccEECCC--CCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CCC
Confidence            53       46899999999999986  356677777887887 77664 56778899999999999999998764 578


Q ss_pred             eEEecCCccccHHHHHHHHHHHhC
Q 025702          212 VFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +|++.++ .+++.|+++.+.+.++
T Consensus       240 ~~~~~~~-~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          240 IFVPKIP-SMKMTDLAKALAPNTP  262 (344)
T ss_dssp             EEEECCC-EEEHHHHHHHHCTTCC
T ss_pred             EEecCCC-cEEHHHHHHHHHHhCC
Confidence            9998776 5999999999997664

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.96  E-value=4.9e-29  Score=199.63  Aligned_cols=219  Identities=13%  Similarity=0.137  Sum_probs=164.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||||++|++++++|+++|++|++++|++.......    ...+.. ...+++++.+|+.|.+++.++++  ++|+|||+
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~   83 (313)
T 1qyd_A           10 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK----VQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISA   83 (313)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH----HHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhH----HHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCEEEEC
Confidence            699999999999999999999999999865310000    000000 13579999999999999999998  99999999


Q ss_pred             CCC-----ChhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCC-CCcccchHHHHHHHhhcCCcEEEee
Q 025702           80 NGR-----EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLR  150 (249)
Q Consensus        80 ~~~-----~~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~~~r  150 (249)
                      ++.     +...+.+++++++  + +++||+ |   +||......   +.+..| .+.|.+|..+|+++++.+++++++|
T Consensus        84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilr  156 (313)
T 1qyd_A           84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAIEAASIPYTYVS  156 (313)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEE
T ss_pred             CccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHHHhcCCCeEEEE
Confidence            885     4567899999987  6 889985 3   454322211   122233 3345899999999999999999999


Q ss_pred             cceeeCCCCCcchHHHHHHH----HHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCC-ccccHHH
Q 025702          151 PVYIYGPLNYNPVEEWFFHR----LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDG  225 (249)
Q Consensus       151 ~~~v~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~  225 (249)
                      |+.++++...     .+...    ...+..+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|
T Consensus       157 p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e  231 (313)
T 1qyd_A          157 SNMFAGYFAG-----SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKE  231 (313)
T ss_dssp             CCEEHHHHTT-----TSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHH
T ss_pred             eceecccccc-----ccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHH
Confidence            9998875211     01110    113334556677788899999999999999999987656788888875 7899999


Q ss_pred             HHHHHHHHhCCC
Q 025702          226 LARACAKVTGYC  237 (249)
Q Consensus       226 l~~~~~~~~g~~  237 (249)
                      +++.+.+.+|.+
T Consensus       232 ~~~~~~~~~g~~  243 (313)
T 1qyd_A          232 VIQIWERLSEQN  243 (313)
T ss_dssp             HHHHHHHHHTCC
T ss_pred             HHHHHHHhcCCC
Confidence            999999999965

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.96  E-value=9.9e-29  Score=200.68  Aligned_cols=215  Identities=14%  Similarity=0.147  Sum_probs=162.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEec-cCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-RKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d-~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||||++|++++++|+++|++|++++|++.....       ..+. ...+++++.+| ++|.+++.++++  ++|+|||+
T Consensus        11 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~l~-~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~   80 (352)
T 1xgk_A           11 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-------EELQ-AIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN   80 (352)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH-------HHHH-TSTTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH-------HHHh-hcCCcEEEECCccCCHHHHHHHHh--cCCEEEEc
Confidence            7999999999999999999999999998765210       0000 02478999999 999999999998  89999998


Q ss_pred             CCCC----hhhhHHHHHhCC--C-CCeEEEeeccc--cccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEee
Q 025702           80 NGRE----ADEVEPILDALP--N-LEQFIYCSSAG--VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLR  150 (249)
Q Consensus        80 ~~~~----~~~~~~~~~a~~--~-~~~~i~~Ss~~--v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r  150 (249)
                      ++..    ....++++++++  + +++||++||..  .|+.           ..+..|+.+|..+|.+++..+++++++|
T Consensus        81 a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~~~~~y~~sK~~~E~~~~~~gi~~~ivr  149 (352)
T 1xgk_A           81 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------WPAVPMWAPKFTVENYVRQLGLPSTFVY  149 (352)
T ss_dssp             CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------CCCCTTTHHHHHHHHHHHTSSSCEEEEE
T ss_pred             CCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC-----------CCCccHHHHHHHHHHHHHHcCCCEEEEe
Confidence            8653    334588999876  7 89999999975  3321           2233455999999999999999999999


Q ss_pred             cceeeCCCCCcchHHHHHH-H-HHcCCC-eeecCCCcceEeeeeH-HHHHHHHHHHhcCCC--CCCceEEecCCccccHH
Q 025702          151 PVYIYGPLNYNPVEEWFFH-R-LKAGRP-IPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFD  224 (249)
Q Consensus       151 ~~~v~g~~~~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~~~~i~~-~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~~  224 (249)
                      |+ +||++....... ++. . ...+.. +..+++++..++++|+ +|+|++++.+++++.  ..+++|++++ +.+|+.
T Consensus       150 pg-~~g~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~  226 (352)
T 1xgk_A          150 AG-IYNNNFTSLPYP-LFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPV  226 (352)
T ss_dssp             EC-EEGGGCBSSSCS-SCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHH
T ss_pred             cc-eecCCchhcccc-cccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHH
Confidence            76 688764322110 110 0 112222 2345667788999999 899999999998753  2578999996 679999


Q ss_pred             HHHHHHHHHhCCCcc
Q 025702          225 GLARACAKVTGYCIA  239 (249)
Q Consensus       225 ~l~~~~~~~~g~~~~  239 (249)
                      |+++.+.+.+|.+.+
T Consensus       227 e~~~~i~~~~G~~~~  241 (352)
T 1xgk_A          227 QVCAAFSRALNRRVT  241 (352)
T ss_dssp             HHHHHHHHHHTSCEE
T ss_pred             HHHHHHHHHHCCCCc
Confidence            999999999997543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.96  E-value=9.4e-29  Score=198.46  Aligned_cols=216  Identities=19%  Similarity=0.232  Sum_probs=165.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||||++|++++++|+++|++|++++|++......+     ..+  ...+++++.+|+.|.+++.++++  ++|+|||++
T Consensus        17 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-----~~l--~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a   87 (318)
T 2r6j_A           17 FGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLL-----DEF--QSLGAIIVKGELDEHEKLVELMK--KVDVVISAL   87 (318)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHH-----HHH--HHTTCEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHH-----HHh--hcCCCEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence            699999999999999999999999999875211100     000  13579999999999999999998  899999999


Q ss_pred             CCC-hhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCC-CCcccchHHHHHHHhhcCCcEEEeecceee
Q 025702           81 GRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (249)
Q Consensus        81 ~~~-~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~~~r~~~v~  155 (249)
                      +.. ...+++++++++  + +++||+ |   +||...    .+..+..| .+.|.+|..+|+++++.+++++++||+.++
T Consensus        88 ~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~  159 (318)
T 2r6j_A           88 AFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFA  159 (318)
T ss_dssp             CGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEH
T ss_pred             chhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceeh
Confidence            853 567899999987  6 889984 3   344321    22222223 234589999999999999999999998877


Q ss_pred             CCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecC-CccccHHHHHHHHHHHh
Q 025702          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARACAKVT  234 (249)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~l~~~~~~~~  234 (249)
                      +.     +.+.+......+..+.++++++..+++++++|+|++++.++.++...++.|++.+ ++.+|+.|+++.+.+.+
T Consensus       160 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~  234 (318)
T 2r6j_A          160 SY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI  234 (318)
T ss_dssp             HH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH
T ss_pred             hh-----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHh
Confidence            64     2333332222445566677788899999999999999999988765577888876 47899999999999999


Q ss_pred             CCCc
Q 025702          235 GYCI  238 (249)
Q Consensus       235 g~~~  238 (249)
                      |.+.
T Consensus       235 g~~~  238 (318)
T 2r6j_A          235 GKKF  238 (318)
T ss_dssp             TCCC
T ss_pred             CCCC
Confidence            9653

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=8.8e-29  Score=188.46  Aligned_cols=200  Identities=18%  Similarity=0.243  Sum_probs=132.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||||++|++++++|+++|++|++++|++.+....            ..+++++.+|++|.+.  +.+.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   69 (221)
T 3ew7_A            6 IGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT------------HKDINILQKDIFDLTL--SDLS--DQNVVVDAY   69 (221)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH------------CSSSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc------------cCCCeEEeccccChhh--hhhc--CCCEEEECC
Confidence            79999999999999999999999999987652211            1578999999999877  6676  999999999


Q ss_pred             CCC-------hhhhHHHHHhCC--CCCeEEEeecccccc-CCCCCCCCCCCCCCCCCcc-cchHHHHHH--Hh--hcCCc
Q 025702           81 GRE-------ADEVEPILDALP--NLEQFIYCSSAGVYL-KSDLLPHCETDTVDPKSRH-KGKLNTESV--LE--SKGVN  145 (249)
Q Consensus        81 ~~~-------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~-~~~~~~~~e~~~~~~~~~~-~~k~~~e~~--~~--~~~~~  145 (249)
                      +..       ...+++++++++  +.+++|++||..++. .....+..++.+..|..+| .+|...|.+  ++  ..+++
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~  149 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFS  149 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence            863       356789999987  589999999987654 3333345566666677777 888888775  55  68899


Q ss_pred             EEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHHH
Q 025702          146 WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDG  225 (249)
Q Consensus       146 ~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~  225 (249)
                      ++++||+++||++.....   +   ...+..+...+++   .++++++|+|++++.+++++...++.|+++++...+..|
T Consensus       150 ~~ivrp~~v~g~~~~~~~---~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          150 WTYISPSAMFEPGERTGD---Y---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             EEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred             EEEEeCcceecCCCccCc---e---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence            999999999998432211   1   0112223333332   368999999999999999998889999999988777654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=1.1e-29  Score=202.13  Aligned_cols=212  Identities=20%  Similarity=0.187  Sum_probs=162.6

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||||++|++++++|+++| ++|++++|++.+...       ..+.  ..+++++.+|+.|.+++.++++  ++|+|||+
T Consensus        11 tGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-------~~l~--~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~   79 (299)
T 2wm3_A           11 FGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-------KELR--LQGAEVVQGDQDDQVIMELALN--GAYATFIV   79 (299)
T ss_dssp             ETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-------HHHH--HTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-------HHHH--HCCCEEEEecCCCHHHHHHHHh--cCCEEEEe
Confidence            6999999999999999998 999999998765210       0011  2578999999999999999998  89999999


Q ss_pred             CCCC--------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEe
Q 025702           80 NGRE--------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (249)
Q Consensus        80 ~~~~--------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~  149 (249)
                      ++..        ...+.+++++++  ++++||++|+..+++....      .  .+..|+.+|..+|.++++.+++++++
T Consensus        80 a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~------~--~~~~y~~sK~~~e~~~~~~gi~~~il  151 (299)
T 2wm3_A           80 TNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG------R--LAAAHFDGKGEVEEYFRDIGVPMTSV  151 (299)
T ss_dssp             CCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT------S--CCCHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC------c--ccCchhhHHHHHHHHHHHCCCCEEEE
Confidence            8742        336778899876  8899999998888753211      1  12233499999999999999999999


Q ss_pred             ecceeeCCCCCcchHHHHHHH-HHcCCCee-ecCCCcceEeeeeHHHHHHHHHHHhcCCC-CCCceEEecCCccccHHHH
Q 025702          150 RPVYIYGPLNYNPVEEWFFHR-LKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKYVTFDGL  226 (249)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~~~~s~~~l  226 (249)
                      ||+++||+...     .+... ...+.... ....++..+++++++|+|++++.++.++. ..++.|++++ +.+|+.|+
T Consensus       152 rp~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~  225 (299)
T 2wm3_A          152 RLPCYFENLLS-----HFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEY  225 (299)
T ss_dssp             ECCEEGGGGGT-----TTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHH
T ss_pred             eecHHhhhchh-----hcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHH
Confidence            99999997421     01111 11222211 12235677899999999999999998752 3578999986 67999999


Q ss_pred             HHHHHHHhCCC
Q 025702          227 ARACAKVTGYC  237 (249)
Q Consensus       227 ~~~~~~~~g~~  237 (249)
                      ++.+.+.+|.+
T Consensus       226 ~~~~~~~~g~~  236 (299)
T 2wm3_A          226 AALLTKHTRKV  236 (299)
T ss_dssp             HHHHHHHHSSC
T ss_pred             HHHHHHHHCCC
Confidence            99999999975

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=3.1e-29  Score=193.02  Aligned_cols=193  Identities=12%  Similarity=0.156  Sum_probs=153.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCce-EEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||||++|++++++|+++|++|++++|++.+....         .  ..++ +++.+|++  +.+.+.+.  ++|+|||+
T Consensus        27 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~---------~--~~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~   91 (236)
T 3e8x_A           27 VGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL---------R--ERGASDIVVANLE--EDFSHAFA--SIDAVVFA   91 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH---------H--HTTCSEEEECCTT--SCCGGGGT--TCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH---------H--hCCCceEEEcccH--HHHHHHHc--CCCEEEEC
Confidence            79999999999999999999999999987653211         0  2478 99999998  77788887  99999999


Q ss_pred             CCC------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhcCC
Q 025702           80 NGR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGV  144 (249)
Q Consensus        80 ~~~------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~  144 (249)
                      ++.            +..++.+++++++  ++++||++||.+.+..       +..+ .+...| .+|..+|.+++..++
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~e~~~~~~gi  163 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLADDELKRSSL  163 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHHHHHHHHCCC
Confidence            986            3456888999987  7899999999665422       1111 344556 999999999999999


Q ss_pred             cEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCccccHH
Q 025702          145 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFD  224 (249)
Q Consensus       145 ~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~  224 (249)
                      +++++||++++|+....              .+.........+++++++|+|++++.+++++...++.|+++++ .+++.
T Consensus       164 ~~~~lrpg~v~~~~~~~--------------~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~  228 (236)
T 3e8x_A          164 DYTIVRPGPLSNEESTG--------------KVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIA  228 (236)
T ss_dssp             EEEEEEECSEECSCCCS--------------EEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHH
T ss_pred             CEEEEeCCcccCCCCCC--------------eEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHH
Confidence            99999999999985322              1222234445678999999999999999998667889999888 49999


Q ss_pred             HHHHHHH
Q 025702          225 GLARACA  231 (249)
Q Consensus       225 ~l~~~~~  231 (249)
                      |+++.+.
T Consensus       229 e~~~~i~  235 (236)
T 3e8x_A          229 KVVEQLG  235 (236)
T ss_dssp             HHHHTC-
T ss_pred             HHHHHhc
Confidence            9998765

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.96  E-value=1.3e-28  Score=188.05  Aligned_cols=198  Identities=14%  Similarity=0.133  Sum_probs=147.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||||++|++++++|+++|++|++++|++.+.....           ..+++++.+|++|.+.  +.+.  ++|+|||++
T Consensus         6 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~a   70 (224)
T 3h2s_A            6 LGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----------GATVATLVKEPLVLTE--ADLD--SVDAVVDAL   70 (224)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----------CTTSEEEECCGGGCCH--HHHT--TCSEEEECC
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----------CCCceEEecccccccH--hhcc--cCCEEEECC
Confidence            799999999999999999999999999876532211           2589999999999877  6676  999999999


Q ss_pred             CC---------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCC---CCCCCCCCCCCCCcc-cchHHHHHH--H-hhc
Q 025702           81 GR---------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDL---LPHCETDTVDPKSRH-KGKLNTESV--L-ESK  142 (249)
Q Consensus        81 ~~---------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~---~~~~e~~~~~~~~~~-~~k~~~e~~--~-~~~  142 (249)
                      +.         +...+++++++++  + +++|++||.+++.....   .+.++...+.|..+| .+|..+|.+  + ++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~  149 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA  149 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCT
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcC
Confidence            87         4567899999988  6 99999999866543222   233344444456777 899988864  2 467


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      +++++++||+++||++....+.       .....+..   +....++++++|+|++++.+++++...+++|++++.+..+
T Consensus       150 ~i~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~  219 (224)
T 3h2s_A          150 NVNWIGISPSEAFPSGPATSYV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEH  219 (224)
T ss_dssp             TSCEEEEEECSBCCCCCCCCEE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC---
T ss_pred             CCcEEEEcCccccCCCcccCce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchh
Confidence            8999999999999985432210       11112221   2344689999999999999999988889999999877655


Q ss_pred             HH
Q 025702          223 FD  224 (249)
Q Consensus       223 ~~  224 (249)
                      +.
T Consensus       220 ~~  221 (224)
T 3h2s_A          220 HH  221 (224)
T ss_dssp             --
T ss_pred             cc
Confidence            44

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.95  E-value=3.3e-28  Score=195.55  Aligned_cols=218  Identities=17%  Similarity=0.218  Sum_probs=164.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCC-CccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||||++|++++++|+++|++|++++|++ .......    ...+.. ...+++++.+|+.|.+++.++++  ++|+|||
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~vi~   83 (321)
T 3c1o_A           10 YGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSS----VQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIVIS   83 (321)
T ss_dssp             ETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHH----HHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHH----HHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            69999999999999999999999999986 2110000    000000 13579999999999999999998  8999999


Q ss_pred             cCCCC-hhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCC-CCcccchHHHHHHHhhcCCcEEEeecce
Q 025702           79 INGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVY  153 (249)
Q Consensus        79 ~~~~~-~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~~~r~~~  153 (249)
                      +++.. ...+.+++++++  + +++||+ |   +||...    .+..+..| .+.|.+|..+|.++++.+++++++||+.
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~~  155 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANC  155 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECCE
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEece
Confidence            99864 567899999987  6 899983 3   344321    12222223 2345899999999999999999999998


Q ss_pred             eeCCCCCcchHHHHHH---HHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecC-CccccHHHHHHH
Q 025702          154 IYGPLNYNPVEEWFFH---RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG-EKYVTFDGLARA  229 (249)
Q Consensus       154 v~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~l~~~  229 (249)
                      ++++     +.+.+..   ....+..+..+++++..+++++++|+|++++.++.++...++.|++.+ ++.+|+.|+++.
T Consensus       156 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~  230 (321)
T 3c1o_A          156 FGAY-----FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISL  230 (321)
T ss_dssp             EHHH-----HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHH
T ss_pred             eccc-----cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHH
Confidence            8775     2222221   112344566667788889999999999999999998765678888886 478999999999


Q ss_pred             HHHHhCCC
Q 025702          230 CAKVTGYC  237 (249)
Q Consensus       230 ~~~~~g~~  237 (249)
                      +.+.+|.+
T Consensus       231 ~~~~~g~~  238 (321)
T 3c1o_A          231 WEAKSGLS  238 (321)
T ss_dssp             HHHHHTSC
T ss_pred             HHHHcCCc
Confidence            99999965

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.95  E-value=2e-28  Score=195.64  Aligned_cols=223  Identities=16%  Similarity=0.217  Sum_probs=164.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||||++|++++++|+++|++|++++|+......  +.. ...+.. ...+++++.+|++|.+++.++++  ++|+|||+
T Consensus        10 tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~--~~~-~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~~   84 (308)
T 1qyc_A           10 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSN--SEK-AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVIST   84 (308)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTT--HHH-HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhCCCCEEEEECCcccccC--HHH-HHHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCCEEEEC
Confidence            6999999999999999999999999998653200  000 000000 13579999999999999999998  89999999


Q ss_pred             CCCC-hhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCC-CCcccchHHHHHHHhhcCCcEEEeeccee
Q 025702           80 NGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVYI  154 (249)
Q Consensus        80 ~~~~-~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~~~r~~~v  154 (249)
                      ++.. ...+.+++++++  + +++||+ |   +||...    .+..+..| .+.|.+|..+|+++++.+++++++||+.+
T Consensus        85 a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~~~  156 (308)
T 1qyc_A           85 VGSLQIESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCF  156 (308)
T ss_dssp             CCGGGSGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEE
T ss_pred             CcchhhhhHHHHHHHHHhcCCCceEee-c---ccccCc----cccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEecee
Confidence            9864 467889999987  6 899984 4   344221    12233334 23458999999999999999999999998


Q ss_pred             eCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCC-ccccHHHHHHHHHHH
Q 025702          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACAKV  233 (249)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~l~~~~~~~  233 (249)
                      +++.... +.. .......+..+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+.+.
T Consensus       157 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~  234 (308)
T 1qyc_A          157 AGYFLRS-LAQ-AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKK  234 (308)
T ss_dssp             HHHHTTT-TTC-TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHH
T ss_pred             ccccccc-ccc-ccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHH
Confidence            8752110 000 0000113345666778888999999999999999999887656778888764 789999999999999


Q ss_pred             hCCCc
Q 025702          234 TGYCI  238 (249)
Q Consensus       234 ~g~~~  238 (249)
                      +|.+.
T Consensus       235 ~g~~~  239 (308)
T 1qyc_A          235 IDKTL  239 (308)
T ss_dssp             TTSCC
T ss_pred             hCCCC
Confidence            99653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.95  E-value=9.6e-28  Score=191.59  Aligned_cols=223  Identities=19%  Similarity=0.237  Sum_probs=163.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCC-CCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||||++|++++++|+++|++|++++|++.....  + ... ..+.. ...+++++.+|+.|.+++.++++  ++|+|||
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~-~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~vi~   82 (307)
T 2gas_A            8 LGPTGAIGRHIVWASIKAGNPTYALVRKTITAAN--PETKE-ELIDNYQSLGVILLEGDINDHETLVKAIK--QVDIVIC   82 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSC--HHHHH-HHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             ECCCchHHHHHHHHHHhCCCcEEEEECCCcccCC--hHHHH-HHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCEEEE
Confidence            6999999999999999999999999998621000  0 000 00000 13579999999999999999998  9999999


Q ss_pred             cCCCC-hhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCC-CCcccchHHHHHHHhhcCCcEEEeecce
Q 025702           79 INGRE-ADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP-KSRHKGKLNTESVLESKGVNWTSLRPVY  153 (249)
Q Consensus        79 ~~~~~-~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~-~~~~~~k~~~e~~~~~~~~~~~~~r~~~  153 (249)
                      +++.. ...+.+++++++  + +++||+ |   +||...    .+..+..| .+.|.+|..+|.++++.+++++++||+.
T Consensus        83 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~  154 (307)
T 2gas_A           83 AAGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHA  154 (307)
T ss_dssp             CSSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCE
T ss_pred             CCcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEcce
Confidence            99864 567899999987  6 899983 3   344321    12222333 2345899999999999999999999999


Q ss_pred             eeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCC-ccccHHHHHHHHHH
Q 025702          154 IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACAK  232 (249)
Q Consensus       154 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~l~~~~~~  232 (249)
                      ++++... .+.. .......+..+.++++++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+.+
T Consensus       155 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~  232 (307)
T 2gas_A          155 FTGYFLR-NLAQ-LDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEK  232 (307)
T ss_dssp             ETTTTGG-GTTC-TTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHH
T ss_pred             eeccccc-cccc-cccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHH
Confidence            8886321 1000 0000113334566677788899999999999999999887656778888764 68999999999999


Q ss_pred             HhCCCc
Q 025702          233 VTGYCI  238 (249)
Q Consensus       233 ~~g~~~  238 (249)
                      .+|.+.
T Consensus       233 ~~g~~~  238 (307)
T 2gas_A          233 KIGKTL  238 (307)
T ss_dssp             HHTSCC
T ss_pred             HhCCCC
Confidence            999653

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.95  E-value=5.8e-28  Score=195.42  Aligned_cols=225  Identities=19%  Similarity=0.219  Sum_probs=155.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++|+++|+++|++|++++|++..... ..  ....+. ...+++++.+|++|.+.+.++++  ++|+|||+|
T Consensus        15 TGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~-~~--~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~A   88 (338)
T 2rh8_A           15 VGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKK-VS--HLLELQ-ELGDLKIFRADLTDELSFEAPIA--GCDFVFHVA   88 (338)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTT-TH--HHHHHG-GGSCEEEEECCTTTSSSSHHHHT--TCSEEEEES
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhh-HH--HHHhcC-CCCcEEEEecCCCChHHHHHHHc--CCCEEEEeC
Confidence            7999999999999999999999999997654211 00  000010 12468899999999999999998  899999998


Q ss_pred             CCC---------------hhhhHHHHHhCC--C-CCeEEEeecccc-ccCC---CCCCCCCCCCC--------CC-CCcc
Q 025702           81 GRE---------------ADEVEPILDALP--N-LEQFIYCSSAGV-YLKS---DLLPHCETDTV--------DP-KSRH  129 (249)
Q Consensus        81 ~~~---------------~~~~~~~~~a~~--~-~~~~i~~Ss~~v-~~~~---~~~~~~e~~~~--------~~-~~~~  129 (249)
                      +..               +.++.++++++.  + ++||||+||..+ |+..   ...+++|+...        .| .+.|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            641               235778888865  4 789999999874 4321   11245555421        11 1235


Q ss_pred             -cchHHHHHHHh----hcCCcEEEeecceeeCCCCCcc---hHHHHHHHHHcCCCeeecCC------CcceEeeeeHHHH
Q 025702          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGS------GIQVTQLGHVKDL  195 (249)
Q Consensus       130 -~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~D~  195 (249)
                       .+|..+|.+++    +.+++++++||+++|||+....   .+..+. ....+....+ +.      +...++++|++|+
T Consensus       169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~~~-~~~~~~~~~~~~~~~i~v~Dv  246 (338)
T 2rh8_A          169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAM-SLITGNEFLI-NGMKGMQMLSGSVSIAHVEDV  246 (338)
T ss_dssp             TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHH-HHHHTCHHHH-HHHHHHHHHHSSEEEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCcccc-ccccccccccCcccEEEHHHH
Confidence             99999998763    3589999999999999975322   111111 1123322111 10      0113489999999


Q ss_pred             HHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      |++++.+++++.. ++.|++++ ..+|+.|+++.+.+.++
T Consensus       247 a~a~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          247 CRAHIFVAEKESA-SGRYICCA-ANTSVPELAKFLSKRYP  284 (338)
T ss_dssp             HHHHHHHHHCTTC-CEEEEECS-EEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHHcCCCc-CCcEEEec-CCCCHHHHHHHHHHhCC
Confidence            9999999987543 45788766 56999999999999876

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.95  E-value=3e-27  Score=191.16  Aligned_cols=224  Identities=17%  Similarity=0.217  Sum_probs=155.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcccc--CCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ--QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+||||++++++|+++|++|++++|++.....  .+..     +.....+++++.+|++|.+.+.++++  ++|+|||
T Consensus        11 TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   83 (337)
T 2c29_D           11 TGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-----LPKAETHLTLWKADLADEGSFDEAIK--GCTGVFH   83 (337)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-----STTHHHHEEEEECCTTSTTTTHHHHT--TCSEEEE
T ss_pred             ECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-----cccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEEE
Confidence            7999999999999999999999999998653110  0000     00001368899999999999999998  8999999


Q ss_pred             cCCCC---------------hhhhHHHHHhCC--C-CCeEEEeecccc-ccCCC-CCCCCCCCCC---------CCCCcc
Q 025702           79 INGRE---------------ADEVEPILDALP--N-LEQFIYCSSAGV-YLKSD-LLPHCETDTV---------DPKSRH  129 (249)
Q Consensus        79 ~~~~~---------------~~~~~~~~~a~~--~-~~~~i~~Ss~~v-~~~~~-~~~~~e~~~~---------~~~~~~  129 (249)
                      +|+..               +.++.++++++.  + +++||++||..+ |+... ..+++|+...         .+.+.|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            98741               234677888876  5 899999999874 44322 2234454321         133346


Q ss_pred             -cchHHHHHHHh----hcCCcEEEeecceeeCCCCCcchHHHHHHH--HHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR--LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 -~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                       .+|..+|.++.    ..+++++++||+++|||+....+...+...  ...+.... .+.. ....++|++|+|++++.+
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAH-YSII-RQGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGG-HHHH-TEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcc-cccc-CCCCEEEHHHHHHHHHHH
Confidence             99999998763    468999999999999997543222111111  12232211 1111 234599999999999999


Q ss_pred             hcCCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      ++++.. ++.|++++ ..+|+.|+++.+.+.++
T Consensus       242 ~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          242 FENPKA-EGRYICSS-HDCIILDLAKMLREKYP  272 (337)
T ss_dssp             HHCTTC-CEEEEECC-EEEEHHHHHHHHHHHCT
T ss_pred             hcCccc-CceEEEeC-CCCCHHHHHHHHHHHCC
Confidence            987643 45776655 56899999999999874

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.95  E-value=3.4e-27  Score=189.59  Aligned_cols=224  Identities=21%  Similarity=0.260  Sum_probs=154.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEec-CCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+||||++++++|+++|++|++++| ++..... ... . ..+.....+++++.+|++|.+.+.++++  ++|+|||+
T Consensus         7 TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~   81 (322)
T 2p4h_X            7 TGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-VSF-L-TNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGIFHT   81 (322)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-CHH-H-HTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEEEEC
T ss_pred             ECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-HHH-H-HhhhccCCceEEEecCCCCHHHHHHHHc--CCCEEEEc
Confidence            799999999999999999999999998 5432100 000 0 0000001367889999999999999998  89999999


Q ss_pred             CCCC---------------hhhhHHHHHhCC---CCCeEEEeeccccc-cCC-CCCCCCCCCCC--------CCCC-cc-
Q 025702           80 NGRE---------------ADEVEPILDALP---NLEQFIYCSSAGVY-LKS-DLLPHCETDTV--------DPKS-RH-  129 (249)
Q Consensus        80 ~~~~---------------~~~~~~~~~a~~---~~~~~i~~Ss~~v~-~~~-~~~~~~e~~~~--------~~~~-~~-  129 (249)
                      |+..               +.++.++++++.   ++++||++||..++ +.. ...+++|+...        .|.. .| 
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            8641               234677888865   46899999998754 322 12244554321        2332 36 


Q ss_pred             cchHHHHHHHh----hcCCcEEEeecceeeCCCCCcch---HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|..+|.++.    ..+++++++||+++|||+.....   ...+ .....+....+ +.  ..++++|++|+|++++.+
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~-~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~  237 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKA-LVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYL  237 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHH-THHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHH-HHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHH
Confidence            99999998763    36899999999999999753221   1111 12233433222 22  334899999999999999


Q ss_pred             hcCCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          203 LGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      ++++...+ .|| ++++.+|+.|+++.+.+.++
T Consensus       238 ~~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          238 LENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred             hhCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCC
Confidence            98755334 588 56688999999999998874

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.95  E-value=3.5e-28  Score=190.43  Aligned_cols=197  Identities=13%  Similarity=0.038  Sum_probs=162.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|+||++++++|+++|++|++++|++...   .           ..+++++.+|++|.+.+.++++  ++|+|||++
T Consensus         8 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a   71 (267)
T 3ay3_A            8 TGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---A-----------EAHEEIVACDLADAQAVHDLVK--DCDGIIHLG   71 (267)
T ss_dssp             ESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---C-----------CTTEEECCCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---c-----------CCCccEEEccCCCHHHHHHHHc--CCCEEEECC
Confidence            79999999999999999999999999987542   1           1367889999999999999998  899999998


Q ss_pred             CC------------ChhhhHHHHHhCC--CCCeEEEeeccccccCC-CCCCCCCCCCCCCCCcc-cchHHHHHHHh----
Q 025702           81 GR------------EADEVEPILDALP--NLEQFIYCSSAGVYLKS-DLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (249)
Q Consensus        81 ~~------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~-~~k~~~e~~~~----  140 (249)
                      +.            |..++.++++++.  ++++||++||..+|+.. ...+++|+.+..|.+.| .+|..+|.+++    
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  151 (267)
T 3ay3_A           72 GVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH  151 (267)
T ss_dssp             SCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            85            2345678888876  77899999999999863 35678888888888888 99999998874    


Q ss_pred             hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcc
Q 025702          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (249)
Q Consensus       141 ~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (249)
                      +.+++++++||+++|+..                      .++...++++|++|+|++++.+++++...+++|++.++..
T Consensus       152 ~~gi~~~~lrp~~v~~~~----------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~  209 (267)
T 3ay3_A          152 KFDIETLNIRIGSCFPKP----------------------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANT  209 (267)
T ss_dssp             TTCCCEEEEEECBCSSSC----------------------CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCS
T ss_pred             HcCCCEEEEeceeecCCC----------------------CCCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCcc
Confidence            468999999999998431                      0122356889999999999999998764457899988888


Q ss_pred             ccHHHHHHHHHHHhCCC
Q 025702          221 VTFDGLARACAKVTGYC  237 (249)
Q Consensus       221 ~s~~~l~~~~~~~~g~~  237 (249)
                      .++.++.+.  +.+|.+
T Consensus       210 ~~~~d~~~~--~~lg~~  224 (267)
T 3ay3_A          210 ESWWDNDKS--AFLGWV  224 (267)
T ss_dssp             SCCBCCGGG--GGGCCC
T ss_pred             ccccCHHHH--HHcCCC
Confidence            888888887  888854

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=1.8e-27  Score=186.34  Aligned_cols=197  Identities=12%  Similarity=0.021  Sum_probs=163.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|+||+++++.|+++|++|++++|++.+..              ..+++++.+|++|.+++.++++  ++|+|||++
T Consensus         9 TGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~A   72 (267)
T 3rft_A            9 TGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA--GCDGIVHLG   72 (267)
T ss_dssp             ESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc--CCCEEEECC
Confidence            799999999999999999999999999976532              2579999999999999999998  999999999


Q ss_pred             CCC------------hhhhHHHHHhCC--CCCeEEEeeccccccC-CCCCCCCCCCCCCCCCcc-cchHHHHHHHh----
Q 025702           81 GRE------------ADEVEPILDALP--NLEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVLE----  140 (249)
Q Consensus        81 ~~~------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~----  140 (249)
                      +..            ..++.+++++++  +.+++|++||..+|+. ....+++|+.+..|.+.| .+|..+|.+++    
T Consensus        73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~  152 (267)
T 3rft_A           73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD  152 (267)
T ss_dssp             SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            862            345778888876  7789999999999974 345577888888888888 99999998774    


Q ss_pred             hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcc
Q 025702          141 SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (249)
Q Consensus       141 ~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (249)
                      +.+++++++||+.++++.                      .++....++++++|+++++..+++.+.....++++.+++.
T Consensus       153 ~~g~~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          153 KFGQETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             HHCCCEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             HhCCeEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence            578999999999999872                      2344556789999999999999998776566888888888


Q ss_pred             ccHHHHHHHHHHHhCCC
Q 025702          221 VTFDGLARACAKVTGYC  237 (249)
Q Consensus       221 ~s~~~l~~~~~~~~g~~  237 (249)
                      .++.++...  +.+|.+
T Consensus       211 ~~~~~~~~~--~~~g~~  225 (267)
T 3rft_A          211 AGWWDNSHL--GFLGWK  225 (267)
T ss_dssp             TCCBCCGGG--GGGCCC
T ss_pred             CCcccChhH--HHCCCC
Confidence            777766443  566653

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.95  E-value=1.1e-27  Score=185.90  Aligned_cols=204  Identities=16%  Similarity=0.143  Sum_probs=155.8

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+|++|++++++|+++  |++|++++|++.+... +           ..+++++.+|++|.+++.++++  ++|+|||
T Consensus        10 tGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~-~-----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   75 (253)
T 1xq6_A           10 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-I-----------GGEADVFIGDITDADSINPAFQ--GIDALVI   75 (253)
T ss_dssp             ESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH-T-----------TCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             EcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh-c-----------CCCeeEEEecCCCHHHHHHHHc--CCCEEEE
Confidence            699999999999999999  8999999998654211 1           2467889999999999999998  8999999


Q ss_pred             cCCCC-----------------------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC-
Q 025702           79 INGRE-----------------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK-  126 (249)
Q Consensus        79 ~~~~~-----------------------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~-  126 (249)
                      +++..                             ..++.+++++++  +.++||++||..++..        ..+..+. 
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~~~~~  147 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPLNKLG  147 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGGGGGG
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCcccccc
Confidence            98742                             124677888876  7889999999887521        1111111 


Q ss_pred             -Ccc-cchHHHHHHHhhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          127 -SRH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       127 -~~~-~~k~~~e~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                       ..| .+|..+|.+++..+++++++||+.+||+......       ...+....+.+.   ..++++++|+|++++.+++
T Consensus       148 ~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~Dva~~~~~~~~  217 (253)
T 1xq6_A          148 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE-------LLVGKDDELLQT---DTKTVPRADVAEVCIQALL  217 (253)
T ss_dssp             GCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSC-------EEEESTTGGGGS---SCCEEEHHHHHHHHHHHTT
T ss_pred             chhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchhh-------hhccCCcCCcCC---CCcEEcHHHHHHHHHHHHc
Confidence             224 6899999999999999999999999998632110       000011111111   2468999999999999999


Q ss_pred             CCCCCCceEEecCCc---cccHHHHHHHHHHHhCC
Q 025702          205 NEKASRQVFNISGEK---YVTFDGLARACAKVTGY  236 (249)
Q Consensus       205 ~~~~~~~~~~i~~~~---~~s~~~l~~~~~~~~g~  236 (249)
                      ++...+++||+++++   .+|+.|+++.+.+.+|.
T Consensus       218 ~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          218 FEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             CGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             CccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            876567899999964   59999999999999985

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.95  E-value=4.6e-26  Score=171.48  Aligned_cols=184  Identities=17%  Similarity=0.255  Sum_probs=143.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||||++|++++++|+++|++|++++|++.+.....           ..+++++.+|++|.+++.++++  ++|+|||++
T Consensus         9 tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a   75 (206)
T 1hdo_A            9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (206)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-----------CCceEEEEecCCCHHHHHHHHc--CCCEEEECc
Confidence            699999999999999999999999999876532211           2578999999999999999998  899999999


Q ss_pred             CCCh---------hhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhcCCcEEE
Q 025702           81 GREA---------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTS  148 (249)
Q Consensus        81 ~~~~---------~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~~  148 (249)
                      +...         ..+.+++++++  +.++||++||..+|+.....+       .+...| .+|..+|.++++.++++++
T Consensus        76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-------~~~~~y~~~K~~~e~~~~~~~i~~~~  148 (206)
T 1hdo_A           76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVLRESGLKYVA  148 (206)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-------ccchhHHHHHHHHHHHHHhCCCCEEE
Confidence            8632         35788888876  788999999999986543211       134456 9999999999999999999


Q ss_pred             eecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCc
Q 025702          149 LRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  219 (249)
Q Consensus       149 ~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~  219 (249)
                      +||+.+. ++.. ..+.            ..+.+.+.  .++++++|+|++++.+++++...++.|++++++
T Consensus       149 lrp~~~~-~~~~~~~~~------------~~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          149 VMPPHIG-DQPLTGAYT------------VTLDGRGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             ECCSEEE-CCCCCSCCE------------EESSSCSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             EeCCccc-CCCCCcceE------------ecccCCCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            9999973 3221 1110            01111111  489999999999999999876678899999875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.94  E-value=2.6e-27  Score=179.55  Aligned_cols=183  Identities=18%  Similarity=0.141  Sum_probs=143.2

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+|++|++++++|+++|+  +|++++|++.+.               ..+++++.+|+.|.+.+.+++    +|+|||
T Consensus        11 tGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---------------~~~~~~~~~D~~~~~~~~~~~----~d~vi~   71 (215)
T 2a35_A           11 AGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------------HPRLDNPVGPLAELLPQLDGS----IDTAFC   71 (215)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------------CTTEECCBSCHHHHGGGCCSC----CSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---------------CCCceEEeccccCHHHHHHhh----hcEEEE
Confidence            69999999999999999998  999999987651               257888899999988777666    999999


Q ss_pred             cCCCCh--------------hhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           79 INGREA--------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        79 ~~~~~~--------------~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +++...              ..+.++++++.  +.++||++||..+|+.             +.+.| .+|..+|.+++.
T Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK~~~e~~~~~  138 (215)
T 2a35_A           72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE  138 (215)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred             CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------CccHHHHHHHHHHHHHHH
Confidence            998642              35677888876  6789999999998742             33456 999999999999


Q ss_pred             cCCc-EEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcc
Q 025702          142 KGVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY  220 (249)
Q Consensus       142 ~~~~-~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~  220 (249)
                      .+++ ++++||+.+|||.....+...+    . +...++ +++  .++++|++|+|++++.+++++.  ++.|++++++.
T Consensus       139 ~~~~~~~~vrp~~v~g~~~~~~~~~~~----~-~~~~~~-~~~--~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~~  208 (215)
T 2a35_A          139 QGWPQLTIARPSLLFGPREEFRLAEIL----A-APIARI-LPG--KYHGIEACDLARALWRLALEEG--KGVRFVESDEL  208 (215)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGGT----T-CCCC-----C--HHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHHH
T ss_pred             cCCCeEEEEeCceeeCCCCcchHHHHH----H-Hhhhhc-cCC--CcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHHH
Confidence            9999 9999999999997543322211    1 111222 222  5689999999999999999875  67999999887


Q ss_pred             ccHHH
Q 025702          221 VTFDG  225 (249)
Q Consensus       221 ~s~~~  225 (249)
                      +++.+
T Consensus       209 ~~~~~  213 (215)
T 2a35_A          209 RKLGK  213 (215)
T ss_dssp             HHHHH
T ss_pred             HHhhc
Confidence            76643

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.93  E-value=1e-24  Score=167.68  Aligned_cols=192  Identities=17%  Similarity=0.180  Sum_probs=139.4

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+|+||++++++|+++| ++|++++|++.......           ..+++++.+|++|.+++.++++  ++|+|||+
T Consensus        29 tGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~   95 (236)
T 3qvo_A           29 LGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-----------PTNSQIIMGDVLNHAALKQAMQ--GQDIVYAN   95 (236)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-----------CTTEEEEECCTTCHHHHHHHHT--TCSEEEEE
T ss_pred             EeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-----------cCCcEEEEecCCCHHHHHHHhc--CCCEEEEc
Confidence            6999999999999999999 99999999977643322           2579999999999999999998  99999999


Q ss_pred             CCCCh--hhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEeecceee
Q 025702           80 NGREA--DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIY  155 (249)
Q Consensus        80 ~~~~~--~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r~~~v~  155 (249)
                      ++...  ..+++++++++  +.++||++||..+|+.......... ...+..++..+..+|+.+++.+++++++||+.++
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~  174 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN-NAVIGEPLKPFRRAADAIEASGLEYTILRPAWLT  174 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC-----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEE
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch-hhcccchHHHHHHHHHHHHHCCCCEEEEeCCccc
Confidence            88632  34677888876  7889999999999876433221111 1122233456677888888899999999999999


Q ss_pred             CCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC-CCCceEEecCCcc
Q 025702          156 GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFNISGEKY  220 (249)
Q Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i~~~~~  220 (249)
                      ++.....              ............+++++|+|++++++++++. ..++.|++++++.
T Consensus       175 ~~~~~~~--------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          175 DEDIIDY--------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             CCSCCCC--------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             CCCCcce--------------EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            9742110              0111111112358999999999999999876 4688999998764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=4.8e-25  Score=170.11  Aligned_cols=185  Identities=18%  Similarity=0.190  Sum_probs=140.7

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+|+||++++++|+++|+  +|++++|++...... .          ..++.++.+|++|.+++.++++  ++|+|||
T Consensus        24 tGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-~----------~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~   90 (242)
T 2bka_A           24 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-A----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   90 (242)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-G----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-c----------cCCceEEecCcCCHHHHHHHhc--CCCEEEE
Confidence            79999999999999999999  999999987653211 0          2468899999999999999998  9999999


Q ss_pred             cCCCC-------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        79 ~~~~~-------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +++..             ..++.++++++.  +.++||++||..+|+.             +...| .+|..+|.+++..
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~~e~~~~~~  157 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL  157 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHHHHHHHHHHHhc
Confidence            99974             235677888876  6789999999988742             23356 9999999999998


Q ss_pred             CC-cEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecC
Q 025702          143 GV-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (249)
Q Consensus       143 ~~-~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (249)
                      ++ +++++||+.+||+.........+........+.. .+    ...+++++|+|++++.+++++.. ++.+.+.+
T Consensus       158 ~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~  227 (242)
T 2bka_A          158 KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDS-WA----SGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  227 (242)
T ss_dssp             CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTT-GG----GGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCcc-cc----CCcccCHHHHHHHHHHHHhCccc-cCeeEeeH
Confidence            99 5999999999999643333333333333322211 11    12589999999999999998764 44665544

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.91  E-value=4.3e-24  Score=162.57  Aligned_cols=192  Identities=17%  Similarity=0.230  Sum_probs=140.6

Q ss_pred             CCCcccchHHHHHHHH-HcCCeEEEEecCCC-ccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~-~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |||+|++|++++++|+ +.|++|++++|++. .....         .....+++++.+|++|.+++.++++  ++|+|||
T Consensus        11 tGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~   79 (221)
T 3r6d_A           11 LGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPE---------IIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFV   79 (221)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHH---------HHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEE
T ss_pred             EeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhh---------ccCCCceEEEECCCCCHHHHHHHHc--CCCEEEE
Confidence            6999999999999999 89999999999876 42111         0014689999999999999999998  9999999


Q ss_pred             cCCC-ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhcCCcEEEeeccee
Q 025702           79 INGR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYI  154 (249)
Q Consensus        79 ~~~~-~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~~~r~~~v  154 (249)
                      +++. +.. +++++++++  +.++||++||..+|+..... ..+.........| .+|..+|.++++.+++++++||+++
T Consensus        80 ~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v  157 (221)
T 3r6d_A           80 GAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWL  157 (221)
T ss_dssp             SCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEE
T ss_pred             cCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence            9987 344 888999877  77899999999987542110 0000000111145 8999999999999999999999999


Q ss_pred             eCCCCCcchHHHHHHHHHcCCCeeecCCCc-ceEeeeeHHHHHHHHHHHh--cCCC-CCCceEEecCCc
Q 025702          155 YGPLNYNPVEEWFFHRLKAGRPIPIPGSGI-QVTQLGHVKDLARAFVQVL--GNEK-ASRQVFNISGEK  219 (249)
Q Consensus       155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~~--~~~~-~~~~~~~i~~~~  219 (249)
                      +++.....              +.....+. ....+++.+|+|+++++++  +++. ..++.+.+.++.
T Consensus       158 ~~~~~~~~--------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          158 YNDPEXTD--------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             ECCTTCCC--------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             cCCCCCcc--------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            99732111              11111111 1224899999999999999  7765 346677777654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.87  E-value=1.3e-22  Score=159.85  Aligned_cols=212  Identities=17%  Similarity=0.144  Sum_probs=147.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+......        .......++.++.+|++|.+++.++++..     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A           11 TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD--------LVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHH--------HHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998655321        11122457899999999999998888743     7999


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+||...                    .+    ++.++..++  +..++|++||...+.           +..+...|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y  151 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------SFAGFSAY  151 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTCHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------CCCCchHH
Confidence            999998621                    12    444555554  678999999977642           22344557


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc------chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                       .+|...|.+.+       ..++++++++||.+.++....      .....+...........   .......+.+++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dv  228 (281)
T 3m1a_A          152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV---QGSDGSQPGDPAKA  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH---HC-----CBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH---hhccCCCCCCHHHH
Confidence             99998887753       268999999999998874211      01111111111111110   01123467889999


Q ss_pred             HHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      |++++.+++++. .+..|+++++......+....+.+.++
T Consensus       229 a~a~~~~~~~~~-~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          229 AAAIRLALDTEK-TPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             HHHHHHHHHSSS-CCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCC-CCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            999999999876 467899999887777777777777665

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.86  E-value=1.4e-22  Score=157.33  Aligned_cols=200  Identities=19%  Similarity=0.153  Sum_probs=136.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC--CCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--~~d~Vi~   78 (249)
                      |||+|+||++++++|+++|++|++++|++....               .   .+.+|+.|.++++++++..  ++|+|||
T Consensus         7 tGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            7 TGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------A---DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C---CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------c---cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            799999999999999999999999999875521               1   1567999999998888644  8999999


Q ss_pred             cCCCCh-------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCC-C-------CCCC-------CCC
Q 025702           79 INGREA-------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLP-H-------CETD-------TVD  124 (249)
Q Consensus        79 ~~~~~~-------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~-~-------~e~~-------~~~  124 (249)
                      +++...             .++.++++++    +  +.+++|++||..+|+.....+ .       +++.       ...
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (255)
T 2dkn_A           69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ  148 (255)
T ss_dssp             CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence            998643             2344455542    2  458999999999886431100 0       0000       012


Q ss_pred             CCCcc-cchHHHHHHHhh-------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~~-------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      +...| .+|...|.+++.       .+++++++||+.++|+..     ..+......+....... + ....+++++|+|
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~-----~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva  221 (255)
T 2dkn_A          149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL-----QASKADPRYGESTRRFV-A-PLGRGSEPREVA  221 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH-----HHHHHCTTTHHHHHSCC-C-TTSSCBCHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh-----hhcccchhhHHHHHHHH-H-HhcCCCCHHHHH
Confidence            34456 999998887642       589999999999999831     11111000000000001 1 234689999999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCccccHHH
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDG  225 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s~~~  225 (249)
                      ++++.+++.+  ...|+.|++.+|..+++.|
T Consensus       222 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          222 EAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             HHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999875  3468899999998777654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.86  E-value=2.1e-21  Score=152.73  Aligned_cols=211  Identities=15%  Similarity=0.133  Sum_probs=146.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+........     ..+. ...++.++.+|++|.+++.++++..     ++|+
T Consensus        22 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   95 (278)
T 2bgk_A           22 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-----NNIG-SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   95 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHH-----HHhC-CCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999754321100     0000 0127899999999999998888642     7999


Q ss_pred             EEecCCCCh----------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA----------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~----------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |||+++...                      .+..+++++    +.  +..++|++||...+....          .+..
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~  165 (278)
T 2bgk_A           96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GVSH  165 (278)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TSCH
T ss_pred             EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------CCCc
Confidence            999998531                      112233333    22  467999999988864321          1334


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch--HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      .| .+|...|.+.+       ..+++++++||++++++......  ............+.       ....+++++|+|+
T Consensus       166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~  238 (278)
T 2bgk_A          166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-------LKGTLLRAEDVAD  238 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-------SCSCCCCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccc-------cccccCCHHHHHH
Confidence            46 89998887763       25899999999999998632211  11222222221111       1235789999999


Q ss_pred             HHHHHhcCC--CCCCceEEecCCccccHHHHHHHHHHHh
Q 025702          198 AFVQVLGNE--KASRQVFNISGEKYVTFDGLARACAKVT  234 (249)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~~s~~~l~~~~~~~~  234 (249)
                      +++.++..+  ...|+.|++.+|..+++.|+++.+.+.+
T Consensus       239 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          239 AVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             HHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            999999754  2358899999999999999999887654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.84  E-value=6.5e-21  Score=148.03  Aligned_cols=198  Identities=13%  Similarity=0.115  Sum_probs=138.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++......     ...+.....++.++.+|++|+++++++++..     ++|+
T Consensus        17 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHV-----VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999986542110     0111122357889999999999988887632     7999


Q ss_pred             EEecCCCCh-------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA-------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~-------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||+++...                   .++.++++++    +  +.+++|++||...+..           ..+...| 
T Consensus        92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  160 (255)
T 1fmc_A           92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NINMTSYA  160 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC-----------CCCCcccH
Confidence            999998531                   1233344442    2  5689999999887532           1234456 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|...|.+.+       ..+++++++||+.++++.......+.+......+.++         ..+.+++|+|++++.+
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l  231 (255)
T 1fmc_A          161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHH
Confidence            89998887753       2478999999999998742111122333333333322         2467899999999999


Q ss_pred             hcCCC--CCCceEEecCCccccH
Q 025702          203 LGNEK--ASRQVFNISGEKYVTF  223 (249)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~s~  223 (249)
                      +..+.  ..|+.|++.+|...|+
T Consensus       232 ~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          232 CSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCCC
T ss_pred             hCCccccCCCcEEEECCceeccC
Confidence            97643  2578999999887764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.83  E-value=5.4e-21  Score=147.56  Aligned_cols=192  Identities=15%  Similarity=0.148  Sum_probs=134.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|+||++++++|+++|++|++++|++......         .....+++++.+|++|.++++++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A           13 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL---------AKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999999999999986542110         000136778899999999999998743 48999999


Q ss_pred             CCCC--------------------hhhhHHHHHhC----C--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           80 NGRE--------------------ADEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        80 ~~~~--------------------~~~~~~~~~a~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      ++..                    ..++.++++++    .  + .+++|++||...+...           .+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s  152 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----------PNLITYSST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTBHHHHHH
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----------CCcchhHHH
Confidence            9852                    11233334442    2  3 5799999998876431           223346 89


Q ss_pred             hHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       132 k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      |...|.+.+       ..+++++++||+.++++..... ..+.+...+.++.+         ..++++++|+|++++.++
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  223 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDVVNSILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHHHHHHHHHh
Confidence            998888763       2578999999999998742100 01122233332222         246899999999999999


Q ss_pred             cCCC--CCCceEEecCCccc
Q 025702          204 GNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~  221 (249)
                      +.+.  ..|+.+++.+|..+
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          224 SDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             SGGGTTCCSSEEEESTTGGG
T ss_pred             CchhhcccCCEEEECCCccC
Confidence            7643  35788999887654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.82  E-value=5.2e-19  Score=137.62  Aligned_cols=186  Identities=17%  Similarity=0.177  Sum_probs=135.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+.....              ...+.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           34 TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------------DPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------------STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------------cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            799999999999999999999999999865521              246889999999999988888643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .++..+++++    .  +..++|++||...+...         +..+...|
T Consensus       100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~~~Y  170 (260)
T 3un1_A          100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---------VGMPSALA  170 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---------TTCCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---------CCCccHHH
Confidence            999998631                    1233344442    3  56799999997764221         12234456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.++++.......    .......+         ...+.+++|+|+++++
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~----~~~~~~~p---------~~r~~~~~dva~av~~  237 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETH----STLAGLHP---------VGRMGEIRDVVDAVLY  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGH----HHHHTTST---------TSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHH----HHHhccCC---------CCCCcCHHHHHHHHHH
Confidence             88988887653       247999999999999986432221    12222222         2246679999999999


Q ss_pred             HhcCCCCCCceEEecCCcccc
Q 025702          202 VLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      +.+.....|+.+++.+|..++
T Consensus       238 L~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          238 LEHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHHCTTCCSCEEEESTTGGGC
T ss_pred             hcccCCCCCcEEEECCCeecc
Confidence            966666679999999987653

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.82  E-value=2.3e-20  Score=148.50  Aligned_cols=210  Identities=17%  Similarity=0.194  Sum_probs=143.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|+........     ..+... ..++.++.+|++|.+++.++++..     ++|
T Consensus        32 TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (302)
T 1w6u_A           32 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-----EQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  106 (302)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421100     011111 357899999999999998888743     679


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----C--C-CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----L--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~--~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +|||+||...                    .++..++++    +  + +..++|++||...+..           ..+..
T Consensus       107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~  175 (302)
T 1w6u_A          107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-----------SGFVV  175 (302)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-----------CTTCH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC-----------CCCcc
Confidence            9999998521                    122233333    2  2 4579999999876532           12334


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH--HHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE--WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      .| .+|...|.+.+       ..+++++++|||.+++++.......  ..........+.         ..+.+++|+|+
T Consensus       176 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~  246 (302)
T 1w6u_A          176 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GRLGTVEELAN  246 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc---------CCCCCHHHHHH
Confidence            56 89998887753       2688999999999998742111100  111122222221         24678999999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +++.++..+.  ..|+.|++.+|..+++.++++.+.+..|
T Consensus       247 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          247 LAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             HHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            9999997543  2588999999999999888887777665

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.81  E-value=4.1e-19  Score=137.45  Aligned_cols=194  Identities=14%  Similarity=0.252  Sum_probs=133.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhh-hhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|++.......     ..+ .....++.++.+|++|.++++++++..     ++|
T Consensus         8 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (250)
T 2cfc_A            8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETA-----RTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID   82 (250)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999865421100     001 111357899999999999988887642     799


Q ss_pred             EEEecCCCChh-----------------------hh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREAD-----------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        75 ~Vi~~~~~~~~-----------------------~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +|||+++....                       +.    +.++..++  +.+++|++||...+..           ..+
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  151 (250)
T 2cfc_A           83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA-----------FPG  151 (250)
T ss_dssp             EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTT
T ss_pred             EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-----------CCC
Confidence            99999975210                       11    23344443  5689999999877532           123


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++++||+.++++...... ...+...+....++         ..+.+++|+|
T Consensus       152 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  222 (250)
T 2cfc_A          152 RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ---------KEIGTAAQVA  222 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT---------CSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence            3456 89998887653       24899999999999998632211 11222233332221         2467899999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++++.+++.+.  ..|+.+++.+|.
T Consensus       223 ~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          223 DAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHHHcCchhhcccCCEEEECCce
Confidence            99999998653  358899998875

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.81  E-value=3.2e-19  Score=140.30  Aligned_cols=209  Identities=16%  Similarity=0.167  Sum_probs=131.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhh---hhccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF---AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|+||+++++.|+++|++|++++|++.......     ..+   .....++.++.+|++|.+++.++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (278)
T 1spx_A           12 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   86 (278)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999999999865421100     001   011346889999999999888887643     7


Q ss_pred             CcEEEecCCCCh-------------h-----------hhHHHHHh----CC-CCCeEEEeecccc-ccCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA-------------D-----------EVEPILDA----LP-NLEQFIYCSSAGV-YLKSDLLPHCETDT  122 (249)
Q Consensus        73 ~d~Vi~~~~~~~-------------~-----------~~~~~~~a----~~-~~~~~i~~Ss~~v-~~~~~~~~~~e~~~  122 (249)
                      +|+|||++|...             .           ++..++++    ++ ...++|++||... +..           
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  155 (278)
T 1spx_A           87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA-----------  155 (278)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC-----------
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccC-----------
Confidence            999999998521             1           11222333    32 1379999999775 421           


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch--HHHH------HHHHHcCCCeeecCCCcce
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWF------FHRLKAGRPIPIPGSGIQV  186 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~  186 (249)
                      ..+...| .+|...+.+.+       ..++++++++||.+.++......  ....      ........+         .
T Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~  226 (278)
T 1spx_A          156 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP---------A  226 (278)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT---------T
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC---------C
Confidence            1223346 89988887653       35899999999999988532110  0000      111111111         1


Q ss_pred             EeeeeHHHHHHHHHHHhcCCC---CCCceEEecCCccccHHHHHHHHHHHh
Q 025702          187 TQLGHVKDLARAFVQVLGNEK---ASRQVFNISGEKYVTFDGLARACAKVT  234 (249)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~---~~~~~~~i~~~~~~s~~~l~~~~~~~~  234 (249)
                      ..+.+++|+|+++++++..+.   ..|+.|++.+|..+++.++++.+.+.+
T Consensus       227 ~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          227 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            246789999999999987643   358899999999999999999988764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.81  E-value=5.6e-20  Score=144.80  Aligned_cols=212  Identities=20%  Similarity=0.172  Sum_probs=148.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhcc---CceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS---SKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|+||++++++|+++|++|++++|++.......     ..+....   ..+.++.+|++|++++.++++..     +
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (281)
T 3svt_A           17 TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAV-----QELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR   91 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999999999875521110     0111111   27889999999999988888643     7


Q ss_pred             CcEEEecCCC-C--------------------hhhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGR-E--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        73 ~d~Vi~~~~~-~--------------------~~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +|++||+|+. .                    ..++..++++    +.  +..++|++||...+..           ..+
T Consensus        92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  160 (281)
T 3svt_A           92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT-----------HRW  160 (281)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC-----------CTT
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC-----------CCC
Confidence            8999999985 1                    1123334443    22  4459999999887532           123


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.++||.++++..... .............++         ..+.+++|+|
T Consensus       161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva  231 (281)
T 3svt_A          161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL---------PRQGEVEDVA  231 (281)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS---------SSCBCHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            4456 99998887753       3568999999999998742110 001122222222222         2356799999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCcccc-HHHHHHHHHHHhCCC
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEKYVT-FDGLARACAKVTGYC  237 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s-~~~l~~~~~~~~g~~  237 (249)
                      ++++++++...  ..|+.|++.+|..++ ..++++.+.+.+|.+
T Consensus       232 ~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~  275 (281)
T 3svt_A          232 NMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD  275 (281)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred             HHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence            99999997643  368999999998877 788999999999854

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.81  E-value=2.2e-19  Score=139.82  Aligned_cols=196  Identities=13%  Similarity=0.191  Sum_probs=134.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        19 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   93 (260)
T 3awd_A           19 TGGAQNIGLACVTALAEAGARVIIADLDEAMATKA-----VEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI   93 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542110     0111112357899999999999988887632     7999


Q ss_pred             EEecCCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                     .++.+++++    +.  +..++|++||...+...         +..+...
T Consensus        94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~~~~~  164 (260)
T 3awd_A           94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQQQAA  164 (260)
T ss_dssp             EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCCHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCCCccc
Confidence            999998532                     112333333    22  56799999997764221         1123345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...|.+++       ..+++++++||+.++++...... .+.+......+.++         ..+++++|+|+++
T Consensus       165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~  235 (260)
T 3awd_A          165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM---------GRVGQPDEVASVV  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT---------SSCBCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc---------CCCCCHHHHHHHH
Confidence            6 99998887763       26899999999999998642111 12233333333221         2467899999999


Q ss_pred             HHHhcCC--CCCCceEEecCCc
Q 025702          200 VQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +.++..+  ...|+.|++.+|.
T Consensus       236 ~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          236 QFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhccCCCcEEEECCce
Confidence            9999753  2368899998875

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.81  E-value=2.4e-19  Score=138.07  Aligned_cols=185  Identities=16%  Similarity=0.182  Sum_probs=132.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC----CCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----~~d~V   76 (249)
                      |||+|+||++++++|+++|++|++++|++..                 ..+.++.+|++|.++++++++..    ++|+|
T Consensus         8 tGasggiG~~la~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            8 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEccCccc-----------------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            7999999999999999999999999998651                 34578899999999998888643    78999


Q ss_pred             EecCCCCh------------------------hhhHHHHHhC----CCC--------CeEEEeeccccccCCCCCCCCCC
Q 025702           77 YDINGREA------------------------DEVEPILDAL----PNL--------EQFIYCSSAGVYLKSDLLPHCET  120 (249)
Q Consensus        77 i~~~~~~~------------------------~~~~~~~~a~----~~~--------~~~i~~Ss~~v~~~~~~~~~~e~  120 (249)
                      ||+++...                        .++.++++++    ...        .++|++||...+...        
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  142 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ--------  142 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC--------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--------
Confidence            99988521                        1223334432    221        299999998876431        


Q ss_pred             CCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeH
Q 025702          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (249)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (249)
                         .+...| .+|...+.+.+       ..+++++++||+.++++.... ....+...+....++  .      ..++++
T Consensus       143 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~--~------~~~~~~  210 (242)
T 1uay_A          143 ---IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--P------PRLGRP  210 (242)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--S------CSCCCH
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCCC--c------ccCCCH
Confidence               233456 89988777653       348999999999999874211 112222333333221  0      236789


Q ss_pred             HHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          193 KDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      +|+|+++++++.++...|+.|++.+|..++
T Consensus       211 ~dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          211 EEYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence            999999999998855578899999987554

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.80  E-value=3.5e-20  Score=144.25  Aligned_cols=201  Identities=17%  Similarity=0.188  Sum_probs=135.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+......        ...+....+.++.+|++|++++.++++..     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A           14 TGSARGIGRAFAEAYVREGATVAIADIDIERARQ--------AAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211        11122457889999999999988887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+||...                    .++..+++++    .  + ..++|++||...+..           ..+...
T Consensus        86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  154 (259)
T 4e6p_A           86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-----------EALVAI  154 (259)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-----------CCCChH
Confidence            999998621                    1233344442    2  2 569999999876522           122344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCC---CeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR---PIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|...+.+.+       ..+++++.++||.++++...  ....++.......   ......+......+.+++|+|+
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (259)
T 4e6p_A          155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD--GVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTG  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH--HHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh--hhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHH
Confidence            6 99998887653       34899999999999998521  1111111111110   0111111122346889999999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCcccc
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      ++++++....  ..|+.|++.+|..+|
T Consensus       233 ~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          233 MAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHhCCccCCCCCCEEEECcChhcC
Confidence            9999886533  358999999987654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.80  E-value=2.3e-19  Score=140.22  Aligned_cols=196  Identities=13%  Similarity=0.111  Sum_probs=122.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh------CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~------~~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|++......     ...+.....++.++.+|++|.++++++++.      .++|
T Consensus        20 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           20 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNEC-----LSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            79999999999999999999999999986542110     011111134688999999999988888753      3799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||+++...                    .++.++++++    +  +.+++|++||...+..           ..+...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~  163 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-----------ASVGSI  163 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC-----------CCCCch
Confidence            9999998521                    1233455543    3  6789999999876532           123345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++++||++++++.........+.......         .....+.+++|+|++++
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~  234 (266)
T 1xq1_A          164 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISR---------KPLGRFGEPEEVSSLVA  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence            6 89998887663       2489999999999999853221111111111111         11234788999999999


Q ss_pred             HHhcCC--CCCCceEEecCCccc
Q 025702          201 QVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      .++..+  ...|+.+++.+|..+
T Consensus       235 ~l~~~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          235 FLCMPAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHcCccccCccCcEEEEcCCccc
Confidence            998753  235889999998654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.80  E-value=1.4e-19  Score=139.56  Aligned_cols=192  Identities=14%  Similarity=0.145  Sum_probs=131.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|+||++++++|+++|++|++++|++.+....         .....+++++.+|++|.+++.++++.. ++|+|||+
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A           13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---------VRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999999999999986442110         000135678899999999999998743 58999999


Q ss_pred             CCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           80 NGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        80 ~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      ++...                    .+...++++    +.  + ..++|++||...+..           ..+...| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~s  152 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------VTNHSVYCST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CTTBHHHHHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----------CCCCchHHHH
Confidence            98531                    112223333    22  3 679999999877532           1233456 99


Q ss_pred             hHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       132 k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      |...|.+.+       ..++++++++|+.++++...... .+..........+         ...+++++|+|++++.++
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~  223 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP---------LGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCT---------TCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCC---------CCCCcCHHHHHHHHHHHc
Confidence            999888763       25789999999999998521000 0011122222211         235789999999999999


Q ss_pred             cCC--CCCCceEEecCCccc
Q 025702          204 GNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       204 ~~~--~~~~~~~~i~~~~~~  221 (249)
                      +.+  ...|+.|++.+|...
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          224 SDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            764  235889999988654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.80  E-value=4.4e-19  Score=132.92  Aligned_cols=162  Identities=12%  Similarity=0.110  Sum_probs=120.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|++|++++++|+ +|++|++++|++.                      .+.+|+.|.+++.++++.. ++|+|||+
T Consensus         9 tGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~   65 (202)
T 3d7l_A            9 IGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------DVTVDITNIDSIKKMYEQVGKVDAIVSA   65 (202)
T ss_dssp             ETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence            7999999999999999 9999999999753                      2578999999999988743 58999999


Q ss_pred             CCCC--------------------hhhhHHHHHhCC-C---CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHH
Q 025702           80 NGRE--------------------ADEVEPILDALP-N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLN  134 (249)
Q Consensus        80 ~~~~--------------------~~~~~~~~~a~~-~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (249)
                      ++..                    ..++.++++++. .   ..++|++||...+..           ..+...| .+|..
T Consensus        66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~~  134 (202)
T 3d7l_A           66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP-----------IVQGASAAMANGA  134 (202)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC-----------CCccHHHHHHHHH
Confidence            9842                    223456777755 2   369999999776421           2233456 89999


Q ss_pred             HHHHHhh------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          135 TESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       135 ~e~~~~~------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      .|.+.+.      .+++++++||+.++++..          ...+         ....+++++++|+|++++.++... .
T Consensus       135 ~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~----------~~~~---------~~~~~~~~~~~dva~~~~~~~~~~-~  194 (202)
T 3d7l_A          135 VTAFAKSAAIEMPRGIRINTVSPNVLEESWD----------KLEP---------FFEGFLPVPAAKVARAFEKSVFGA-Q  194 (202)
T ss_dssp             HHHHHHHHTTSCSTTCEEEEEEECCBGGGHH----------HHGG---------GSTTCCCBCHHHHHHHHHHHHHSC-C
T ss_pred             HHHHHHHHHHHccCCeEEEEEecCccCCchh----------hhhh---------hccccCCCCHHHHHHHHHHhhhcc-c
Confidence            9887643      378999999999998831          1111         112356899999999999988543 3


Q ss_pred             CCceEEec
Q 025702          209 SRQVFNIS  216 (249)
Q Consensus       209 ~~~~~~i~  216 (249)
                      .|+.|++.
T Consensus       195 ~G~~~~vd  202 (202)
T 3d7l_A          195 TGESYQVY  202 (202)
T ss_dssp             CSCEEEEC
T ss_pred             cCceEecC
Confidence            57788863

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.80  E-value=4.4e-19  Score=137.02  Aligned_cols=195  Identities=17%  Similarity=0.230  Sum_probs=136.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|.........    ...+.....++.++.+|++|.++++++++..     ++|+
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A           10 TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV----VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999988653321111    0112222457889999999999988888643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .++..+++++    .  +..++|++||...+..           ..+...|
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  154 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG-----------NPGQANY  154 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-----------CCCChHH
Confidence            999998631                    1233444443    3  5679999999776522           1233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+.++.... .............++         ..+.+++|+|+++++
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~  224 (246)
T 3osu_A          155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPL---------ARFGQDTDIANTVAF  224 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             99988777653       458999999999999985322 223344444444332         235678999999999


Q ss_pred             HhcCCC--CCCceEEecCCcc
Q 025702          202 VLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +++.+.  ..|+.|++.+|..
T Consensus       225 l~s~~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          225 LASDKAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             HTSGGGTTCCSCEEEESTTSC
T ss_pred             HhCccccCCCCCEEEeCCCcc
Confidence            987643  3589999988753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.79  E-value=2.4e-19  Score=139.08  Aligned_cols=194  Identities=15%  Similarity=0.217  Sum_probs=111.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.......     ...+......+.++.+|++|.++++++++..     ++|+
T Consensus        15 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T 3qiv_A           15 TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAV-----AKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY   89 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542211     0112222467889999999999988888643     8999


Q ss_pred             EEecCCCC---h--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGRE---A--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        76 Vi~~~~~~---~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      |||++|..   .                    .+    ++.++..+.  +..++|++||...|.              +.
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------~~  155 (253)
T 3qiv_A           90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL--------------YS  155 (253)
T ss_dssp             EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred             EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC--------------CC
Confidence            99999861   0                    01    233344443  567999999988751              22


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      ..| .+|...+.+.+       ..+++++.++||.++++.........+.....++.         ....+.+++|+|++
T Consensus       156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~  226 (253)
T 3qiv_A          156 NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL---------PLSRMGTPDDLVGM  226 (253)
T ss_dssp             ----CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccC---------CCCCCCCHHHHHHH
Confidence            335 89998887653       24789999999999998532221112222222221         22345668999999


Q ss_pred             HHHHhcCCC--CCCceEEecCCcccc
Q 025702          199 FVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      +++++....  ..|+.|++.+|..++
T Consensus       227 ~~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          227 CLFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             HHHHHSGGGTTCCSCEEEC-------
T ss_pred             HHHHcCccccCCCCCEEEECCCeecC
Confidence            999997543  368999999987654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.79  E-value=2.4e-18  Score=135.50  Aligned_cols=211  Identities=15%  Similarity=0.135  Sum_probs=137.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCc-------hhhhhccCceEEEEeccCCHHHHHHhhhhC--
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--   71 (249)
                      |||+|+||+++++.|+++|++|++++|++............       ..+......+.++.+|++|.++++++++..  
T Consensus        16 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (281)
T 3s55_A           16 TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAED   95 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999986542211111111       112223467899999999999988888643  


Q ss_pred             ---CCcEEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCC
Q 025702           72 ---GFDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (249)
Q Consensus        72 ---~~d~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (249)
                         ++|++||+||...                    .++..++++    +.  +..++|++||...+..           
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  164 (281)
T 3s55_A           96 TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA-----------  164 (281)
T ss_dssp             HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC-----------
Confidence               7999999998631                    123334444    33  5679999999877522           


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHH-HHHHHHcCCC----eeecCCCcceEee
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-FFHRLKAGRP----IPIPGSGIQVTQL  189 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~  189 (249)
                      ..+...| .+|...+.+.+       ..+++++.++||++++|......... +.........    ..+.........+
T Consensus       165 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 3s55_A          165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF  244 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence            1233456 99988887653       35899999999999998643221100 0000000000    0000001112467


Q ss_pred             eeHHHHHHHHHHHhcCCC--CCCceEEecCCcccc
Q 025702          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      .+++|+|++++++++...  ..|+.+++.+|..++
T Consensus       245 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            899999999999998643  358999999987654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.79  E-value=2.9e-18  Score=134.22  Aligned_cols=206  Identities=17%  Similarity=0.143  Sum_probs=141.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+......        ...+...++.++.+|++|.++++++++..     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           17 TGACGGIGLETSRVLARAGARVVLADLPETDLAG--------AAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHH--------HHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHH--------HHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765321        11122467889999999999988888643     7999


Q ss_pred             EEecCCCC-h---------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGRE-A---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~-~---------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||+|+.. .                     .+...+++++    +  +..++|++||...+..           ..+..
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~  157 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA-----------YDMST  157 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB-----------CSSCH
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC-----------CCCCh
Confidence            99999864 1                     0123344443    3  5679999999877522           22334


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++.++||.++++..................+.         ..+.+++|+|+++
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~dvA~~v  228 (271)
T 3tzq_B          158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA---------GRIGEPHEIAELV  228 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            56 99988887653       3689999999999999864322222333333333222         1356799999999


Q ss_pred             HHHhcCCC--CCCceEEecCCccccHHHHHHHHHHHh
Q 025702          200 VQVLGNEK--ASRQVFNISGEKYVTFDGLARACAKVT  234 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s~~~l~~~~~~~~  234 (249)
                      ++++....  ..|+.+++.+|.......+.+...+.+
T Consensus       229 ~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~  265 (271)
T 3tzq_B          229 CFLASDRAAFITGQVIAADSGLLAHLPGLPQIRASVA  265 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTTBCTTHHHHHHHHH
T ss_pred             HHHhCcccCCcCCCEEEECCCccccCCCccccCCccc
Confidence            99997643  368999999984333333444444443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.78  E-value=1.2e-18  Score=135.17  Aligned_cols=193  Identities=15%  Similarity=0.202  Sum_probs=131.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCce-EEEEeccCCHHHHHHhhhh----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLSA----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~d~~d~~~l~~~~~~----~~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++......        ..+...++ .++.+|++|.++++++++.    .++|+
T Consensus        17 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           17 TGAGSGIGLEICRAFAASGARLILIDREAAALDRA--------AQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            79999999999999999999999999986542110        01112356 8899999999998888753    37999


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|...                    .+    ++.++..++  +.+++|++||...+...         +..|...|
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~~Y  159 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQFASSY  159 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCBHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCcchHH
Confidence            999998521                    11    222333433  57899999998775321         11233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|...|.+.+       ..+++++++||+.++++...... .+.+........+         ...+.+++|+|++++
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  230 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP---------MGRCGEPSEIAAAAL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence             89998887653       24899999999999987421000 0122222222221         124788999999999


Q ss_pred             HHhcCC--CCCCceEEecCCc
Q 025702          201 QVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (249)
                      .++..+  ...|+.+++.+|.
T Consensus       231 ~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          231 FLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCcccccccCCEEEECCCE
Confidence            999753  2368899998875

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.78  E-value=8.4e-19  Score=135.78  Aligned_cols=195  Identities=18%  Similarity=0.196  Sum_probs=131.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++.......     ..+.. ..++.++.+|++|.+++.++++..     ++|+
T Consensus        12 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (251)
T 1zk4_A           12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA-----KSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHhhc-cCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421100     00000 147899999999999988888632     5999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--CC-CeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++....                        .++.++..++  +. .++|++||...+...           .+...
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  154 (251)
T 1zk4_A           86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PSLGA  154 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----------CCCcc
Confidence            9999985211                        1234455554  44 799999998775321           23345


Q ss_pred             c-cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+         ..+++++++||++++++.... .......   ...     ........+++++|+|++
T Consensus       155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~---~~~-----~~~~~~~~~~~~~dva~~  225 (251)
T 1zk4_A          155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEA---MSQ-----RTKTPMGHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHH---HTS-----TTTCTTSSCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchhhh---HHH-----hhcCCCCCCcCHHHHHHH
Confidence            6 89988877653         457899999999999874211 0000000   000     011112347899999999


Q ss_pred             HHHHhcCCC--CCCceEEecCCccc
Q 025702          199 FVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      +++++..+.  ..|+.+++.+|..+
T Consensus       226 ~~~l~~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          226 CVYLASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHcCcccccccCcEEEECCCccC
Confidence            999997643  35889999988643

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.78  E-value=1.6e-18  Score=135.20  Aligned_cols=197  Identities=14%  Similarity=0.154  Sum_probs=133.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++|++......     ...+... ..++.++.+|++|.+++.++++..     ++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (263)
T 3ai3_A           13 TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEA-----ARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD   87 (263)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999986542110     0111111 346889999999999888887643     799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHH----hCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~----a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||++|...                    .+...+++    .++  +..++|++||...+...           .+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (263)
T 3ai3_A           88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------WYEPI  156 (263)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CCcch
Confidence            9999998521                    11222333    333  56899999998876321           22334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch----------HHHHHHHHHcC-CCeeecCCCcceEee
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAG-RPIPIPGSGIQVTQL  189 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~  189 (249)
                      | .+|...+.+.+       ..++++++++||++++|......          ........... .         ....+
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~  227 (263)
T 3ai3_A          157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHA---------PIKRF  227 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHC---------TTCSC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCC---------CCCCC
Confidence            6 89988887653       35899999999999998421100          01111111111 1         11347


Q ss_pred             eeHHHHHHHHHHHhcCCC--CCCceEEecCCcccc
Q 025702          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      .+++|+|+++++++..+.  ..|+.|++.+|..++
T Consensus       228 ~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          228 ASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             BCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             cCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            889999999999997643  358899999987654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.78  E-value=1.7e-18  Score=134.62  Aligned_cols=189  Identities=13%  Similarity=0.075  Sum_probs=128.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+......        .+.  ..++.++.+|++|.+++.++++..     ++|+
T Consensus        33 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           33 TGASQRVGLHCALRLLEHGHRVIISYRTEHASVT--------ELR--QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHH--------HHH--HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------HHH--hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998765311        111  135889999999999988888642     7999


Q ss_pred             EEecCCCCh-------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA-------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~-------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||+||...                   .++..++++    ++  +..++|++||...+..           ..+...| 
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  171 (260)
T 3gem_A          103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-----------SSKHIAYC  171 (260)
T ss_dssp             EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-----------CSSCHHHH
T ss_pred             EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------CCCcHhHH
Confidence            999998531                   122233333    22  4579999999876522           1233456 


Q ss_pred             cchHHHHHHHhh------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          130 KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       130 ~~k~~~e~~~~~------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      .+|...+.+.+.      .+++++.++||.+.++....   ...........++         ..+..++|+|+++++++
T Consensus       172 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p~---------~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          172 ATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSAL---------GIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS---------CCCCCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            999888876531      25899999999998764211   1111111121111         23456899999999999


Q ss_pred             cCCCCCCceEEecCCcccc
Q 025702          204 GNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s  222 (249)
                      +.....|+.+++.+|..++
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          240 DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HCSSCCSCEEEESTTTTTC
T ss_pred             hCCCCCCCEEEECCCcccC
Confidence            7766689999999987664

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.78  E-value=3e-19  Score=138.83  Aligned_cols=194  Identities=19%  Similarity=0.218  Sum_probs=132.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecC-CCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|+ +......     ...+.....++.++.+|++|.++++++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B           13 TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDET-----IASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHH-----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHH-----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998 4432110     0111112357899999999999998888643     799


Q ss_pred             EEEecCCC-Ch--------------------hhhHHHHH----hCC--C--C---CeEEEeeccccccCCCCCCCCCCCC
Q 025702           75 VVYDINGR-EA--------------------DEVEPILD----ALP--N--L---EQFIYCSSAGVYLKSDLLPHCETDT  122 (249)
Q Consensus        75 ~Vi~~~~~-~~--------------------~~~~~~~~----a~~--~--~---~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (249)
                      +|||+++. ..                    .++..+++    .+.  +  .   .++|++||...+..          +
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~  157 (258)
T 3afn_B           88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----------G  157 (258)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----------C
T ss_pred             EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----------C
Confidence            99999985 21                    01222222    222  2  2   78999999876531          1


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      ..+...| .+|...|.+.+       ..+++++++||+.++++..... .+.+...+..+.+         ...+++++|
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~d  227 (258)
T 3afn_B          158 GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-TQDVRDRISNGIP---------MGRFGTAEE  227 (258)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-CHHHHHHHHTTCT---------TCSCBCGGG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-CHHHHHHHhccCC---------CCcCCCHHH
Confidence            1234456 99998887753       2489999999999999853221 1223333333322         135789999


Q ss_pred             HHHHHHHHhcCC---CCCCceEEecCCc
Q 025702          195 LARAFVQVLGNE---KASRQVFNISGEK  219 (249)
Q Consensus       195 ~a~~~~~~~~~~---~~~~~~~~i~~~~  219 (249)
                      +|++++.++..+   ...|+.|++.+|.
T Consensus       228 va~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          228 MAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             THHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHhCcchhccccCCEEeECCCc
Confidence            999999999764   2358899998875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.78  E-value=3.1e-18  Score=132.95  Aligned_cols=200  Identities=17%  Similarity=0.199  Sum_probs=132.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++....       ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A           10 TGSTSGIGLGIAQVLARAGANIVLNGFGDPAPA-------LAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHH-------HHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865210       0111111346888999999999998888642     7999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|....                        .++.++..++  +..++|++||...+...           .+...|
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  151 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----------TGKAAY  151 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----------CCchhH
Confidence            9999985311                        1333444444  56899999998775321           123346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCC----eeecCCCcceEeeeeHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP----IPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~D~a~  197 (249)
                       .+|...+.+.+       ..++++++++||.++++.... ..... ... ....    -.+.........+++++|+|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~-~~~-~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  228 (255)
T 2q2v_A          152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK-QIDDR-AAN-GGDPLQAQHDLLAEKQPSLAFVTPEHLGE  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH-HHHHH-HHH-TCCHHHHHHHHHTTTCTTCCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh-hcccc-ccc-ccchHHHHHHHHhccCCCCCCcCHHHHHH
Confidence             89988887653       257899999999999874111 10000 000 0000    000011112235889999999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCccc
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      ++++++..+.  ..|+.|++.+|..+
T Consensus       229 ~~~~l~s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          229 LVLFLCSEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhCCccCCCCCCEEEECCCccC
Confidence            9999987643  35889999887643

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.78  E-value=2.9e-19  Score=139.40  Aligned_cols=204  Identities=16%  Similarity=0.145  Sum_probs=127.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcccc---CCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|+||+++++.|+++|++|++++|++.....   .+.... ........++.++.+|++|.+++.++++..     +
T Consensus        13 TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (264)
T 2pd6_A           13 TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPG-SKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSR   91 (264)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-------------CCEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-ccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998654211   110000 000000146889999999999988888632     3


Q ss_pred             C-cEEEecCCCCh--------------------hhhHHHHHhCC------C-CCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           73 F-DVVYDINGREA--------------------DEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        73 ~-d~Vi~~~~~~~--------------------~~~~~~~~a~~------~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      + |+|||+++...                    .++.++++++.      + ..++|++||...+..           ..
T Consensus        92 i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  160 (264)
T 2pd6_A           92 PPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG-----------NV  160 (264)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC-----------CT
T ss_pred             CCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC-----------CC
Confidence            4 99999998531                    12334444422      3 569999999765422           12


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      +...| .+|...+.+.+       ..+++++++||+.++++.... ....+........         ....+.+++|+|
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva  230 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEMI---------PMGHLGDPEDVA  230 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGC---------TTCSCBCHHHHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHhC---------CCCCCCCHHHHH
Confidence            33456 89988877653       268999999999999985321 1111111111111         112467899999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCccccHHHH
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYVTFDGL  226 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s~~~l  226 (249)
                      ++++.++..+  ...|+.+++.+|..++....
T Consensus       231 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          231 DVVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             HHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence            9999999753  24688999999887665543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.78  E-value=7.1e-19  Score=136.59  Aligned_cols=198  Identities=15%  Similarity=0.114  Sum_probs=136.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.......     ...+.....++.++.+|++|.++++++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   92 (256)
T 3gaf_A           18 TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAV-----AAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV   92 (256)
T ss_dssp             CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542111     1122222467899999999999888887643     7999


Q ss_pred             EEecCCCCh-------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA-------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~-------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||+||...                   .+...++++    ++  +..++|++||...+..           ..+...| 
T Consensus        93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  161 (256)
T 3gaf_A           93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT-----------NVRMASYG  161 (256)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC-----------CCCchHHH
Confidence            999998631                   123334444    22  4579999999876421           2233456 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|...+.+.+       ..+++++.++||.+.++.......+..........++         ..+.+++|+|++++++
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~L  232 (256)
T 3gaf_A          162 SSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL---------GRLGEAQDIANAALFL  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence            99988887653       3579999999999988731110111222223332222         2467899999999999


Q ss_pred             hcCC--CCCCceEEecCCccccH
Q 025702          203 LGNE--KASRQVFNISGEKYVTF  223 (249)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~~s~  223 (249)
                      +...  ...|+.+++.+|...++
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          233 CSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCCC-
T ss_pred             cCCcccCccCCEEEECCCccccC
Confidence            9753  23689999999887654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.78  E-value=7.6e-19  Score=137.77  Aligned_cols=195  Identities=18%  Similarity=0.174  Sum_probs=130.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|........+    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        27 tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~  102 (274)
T 1ja9_A           27 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV----VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF  102 (274)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999432211100    0111122357889999999999988887632     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CCCCCeEEEeeccccc-cCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVY-LKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||+++...                    .++.+++++    +++..++|++||...+ ..           ..+...| 
T Consensus       103 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~~Y~  171 (274)
T 1ja9_A          103 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG-----------IPNHALYA  171 (274)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS-----------CCSCHHHH
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCC-----------CCCCchHH
Confidence            999998531                    123334333    3312699999998875 22           1123346 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-----------chH-HHHHHHHHcCCCeeecCCCcceEeee
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----------PVE-EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                      .+|...|.+.+       ..++++++++|+.++++....           ... .........+.         ....++
T Consensus       172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  242 (274)
T 1ja9_A          172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN---------PLKRIG  242 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS---------TTSSCB
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC---------CCCCcc
Confidence            89999887763       248999999999998863110           000 11112222221         223578


Q ss_pred             eHHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++|+|++++.++..+.  ..|+.|++.+|.
T Consensus       243 ~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          243 YPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            99999999999997643  258899998864

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.77  E-value=2.1e-18  Score=134.59  Aligned_cols=199  Identities=14%  Similarity=0.184  Sum_probs=134.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.......+.    ........++.++.+|++|.+++.++++..     ++|+
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A           13 TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMK----ETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH----HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999887654221110    111122457999999999999998888743     8999


Q ss_pred             EEecCCC--C--------------------hhhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGR--E--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~--~--------------------~~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |||+||.  .                    ..+...+++++    +  +..++|++||...++..         +..+..
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~~~~  159 (264)
T 3i4f_A           89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP---------GWIYRS  159 (264)
T ss_dssp             EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC---------CCTTCH
T ss_pred             EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC---------CCCCCc
Confidence            9999992  1                    11233344443    3  56799999987554221         122334


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++.++||.++++..... ...........         .....+.+++|+|+++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~---------~p~~r~~~~~dva~~v  229 (264)
T 3i4f_A          160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHN---------TPIGRSGTGEDIARTI  229 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC-----------------CCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhc---------CCCCCCcCHHHHHHHH
Confidence            56 89988877653       3689999999999999853222 22222111111         1223467899999999


Q ss_pred             HHHhcCCC--CCCceEEecCCcccc
Q 025702          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      +++++.+.  ..|+.+++.+|....
T Consensus       230 ~~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          230 SFLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             HHHcCcccCCCCCcEEEEcCceeec
Confidence            99998643  368999999987544

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.77  E-value=3.1e-18  Score=135.38  Aligned_cols=196  Identities=17%  Similarity=0.191  Sum_probs=135.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhcc-CceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.... ..+.++.+|++|.++++++++..     ++|
T Consensus        47 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  121 (293)
T 3rih_A           47 TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVT-----AELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD  121 (293)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-----HHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999876532110     1111112 57899999999999888877643     789


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||...                    .+...+++++    +  +..++|++||...+.          .+..+...
T Consensus       122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~----------~~~~~~~~  191 (293)
T 3rih_A          122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV----------TGYPGWSH  191 (293)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT----------BBCTTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc----------CCCCCCHH
Confidence            9999998621                    1344455554    2  568999999976420          01123345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++.++||.++++... .....+........++.         .+..++|+|++++
T Consensus       192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~p~~---------r~~~p~dvA~~v~  261 (293)
T 3rih_A          192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV-DMGEEYISGMARSIPMG---------MLGSPVDIGHLAA  261 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH-HTCHHHHHHHHTTSTTS---------SCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh-hccHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence            6 99988887653       35899999999999987421 11122333333333321         2456899999999


Q ss_pred             HHhcCC--CCCCceEEecCCccc
Q 025702          201 QVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      +++...  ...|+.+++.+|..+
T Consensus       262 fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          262 FLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCCCCEEEECCCccC
Confidence            999754  346899999998754

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.77  E-value=1.3e-18  Score=135.70  Aligned_cols=193  Identities=15%  Similarity=0.152  Sum_probs=130.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++......        ..+...++.++.+|++|.+++.++++..     ++|+
T Consensus        18 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           18 TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAV--------VAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542110        0011236788999999999988887642     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||++|...                    .+...++++    +.  + ..++|++||...+..           ..+...
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  158 (263)
T 3ak4_A           90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG-----------APLLAH  158 (263)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC-----------CCCchh
Confidence            999998521                    112233333    22  3 579999999876421           122334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-----H-----HHHHHHHHcCCCeeecCCCcceEeee
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----E-----EWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                      | .+|...+.+.+       ..++++++++|+.++++......     .     ...........         ....+.
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~  229 (263)
T 3ak4_A          159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT---------PLGRIE  229 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC---------TTCSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC---------CCCCCc
Confidence            6 89988877653       34899999999999887311100     0     11111111111         113478


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      +++|+|+++++++..+  ...|+.|++.+|..+
T Consensus       230 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          230 EPEDVADVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence            8999999999999764  236889999988643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.77  E-value=1.9e-19  Score=135.44  Aligned_cols=164  Identities=20%  Similarity=0.134  Sum_probs=120.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-CCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-~~~d~Vi~~   79 (249)
                      |||+|++|++++++|+++  +|++++|++......        .... .. +++.+|++|.+++.++++. .++|+|||+
T Consensus         6 tGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~--------~~~~-~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            6 TGATGGLGGAFARALKGH--DLLLSGRRAGALAEL--------AREV-GA-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             ETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHH--------HHHH-TC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             EcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHH--------HHhc-cC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999998  999999976442110        0001 12 7889999999999988863 279999999


Q ss_pred             CCCC--------------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHH
Q 025702           80 NGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        80 ~~~~--------------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e  136 (249)
                      ++..                    ..++.++++++.  +.+++|++||...+..           ..+...| .+|...|
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~  142 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ-----------VPGFAAYAAAKGALE  142 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS-----------STTBHHHHHHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC-----------CCCcchHHHHHHHHH
Confidence            9853                    123556777776  5679999999888632           1234456 8999888


Q ss_pred             HHHhh-------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC
Q 025702          137 SVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       137 ~~~~~-------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (249)
                      .+++.       .+++++++||+.++++..             .       +.+.....+++++|+|++++.+++++.
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~-------------~-------~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLW-------------A-------PLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGG-------------G-------GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCc-------------c-------ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            87632       589999999999998741             0       111223578999999999999998765

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.77  E-value=2.5e-18  Score=133.88  Aligned_cols=196  Identities=15%  Similarity=0.116  Sum_probs=130.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEec-CCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||++++++|+++|++|++++| +...... +    ...+.....++.++.+|++|.+++.++++..     ++|
T Consensus        13 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A           13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANS-V----LEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-H----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHH-H----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999 4332110 0    0111112356888999999999888877643     799


Q ss_pred             EEEecCCCChh--------------------hhHHHHH----hCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREAD--------------------EVEPILD----ALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~~~~~~~----a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +|||+++....                    +...+++    .+.  + ..++|++||...+.           +..+..
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~  156 (261)
T 1gee_A           88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PWPLFV  156 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCTTCH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----------CCCCcc
Confidence            99999985311                    1222333    332  3 57999999977642           223344


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      .| .+|...+.+.+       ..+++++++||+.++++...... .+.....+....+         ...+.+++|+|++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~  227 (261)
T 1gee_A          157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP---------MGYIGEPEEIAAV  227 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT---------TSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC---------CCCCcCHHHHHHH
Confidence            56 89987776652       34899999999999998421110 0112222222111         1246889999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCccc
Q 025702          199 FVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++.++...  ...|+.+++.+|..+
T Consensus       228 ~~~l~~~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          228 AAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCccccCCCCcEEEEcCCccc
Confidence            99998753  235889999988653

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.77  E-value=6.2e-18  Score=131.38  Aligned_cols=194  Identities=13%  Similarity=0.166  Sum_probs=127.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.........        +....+.++.+|++|.++++++++..     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A           13 TGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAA--------ELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--------HhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998766332211        11357889999999999988888643     7999


Q ss_pred             EEecCCCCh-------------h-----------hhHHHHHh----CC--------CCCeEEEeeccccccCCCCCCCCC
Q 025702           76 VYDINGREA-------------D-----------EVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPHCE  119 (249)
Q Consensus        76 Vi~~~~~~~-------------~-----------~~~~~~~a----~~--------~~~~~i~~Ss~~v~~~~~~~~~~e  119 (249)
                      +||+||...             .           +...++++    ++        +..++|++||...+...       
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~-------  157 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ-------  157 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-------
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC-------
Confidence            999998631             1           12223333    22        23579999998775321       


Q ss_pred             CCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeee
Q 025702          120 TDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       120 ~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                          .+...| .+|...+.+.+       ..+++++.++||.+.++.... .............++        ...+.+
T Consensus       158 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~--------~~r~~~  224 (257)
T 3tpc_A          158 ----IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG-MPQDVQDALAASVPF--------PPRLGR  224 (257)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CCSSS--------SCSCBC
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc-CCHHHHHHHHhcCCC--------CCCCCC
Confidence                233446 99988877642       368999999999999884211 111111111111111        034678


Q ss_pred             HHHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          192 VKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      ++|+|++++++++.....|+.+++.+|..++
T Consensus       225 ~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          225 AEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            9999999999998866679999999987654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.77  E-value=8e-19  Score=136.33  Aligned_cols=196  Identities=13%  Similarity=0.072  Sum_probs=129.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++.. ...        ..+. .. .++.+|++|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~--------~~~~-~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A           12 TGGARGIGRAIAQAFAREGALVALCDLRPEG-KEV--------AEAI-GG-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHH--------HHHH-TC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHH--------HHHh-hC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654 211        0111 13 78899999999888877642     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+||...                    .+...++++    ++  +..++|++||...+..           ..+...|
T Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  149 (256)
T 2d1y_A           81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-----------EQENAAY  149 (256)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC-----------CCCChhH
Confidence            999998531                    122233333    32  4679999999776421           1223346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHH-HHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|...+.+.+       ..+++++.++||.+.++.     ....... ..................+++++|+|++++
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~  224 (256)
T 2d1y_A          150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-----VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-----hhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             89988887653       357899999999987762     1111000 000010000011112235789999999999


Q ss_pred             HHhcCC--CCCCceEEecCCccccH
Q 025702          201 QVLGNE--KASRQVFNISGEKYVTF  223 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~s~  223 (249)
                      ++++.+  ...|+.+++.+|..+++
T Consensus       225 ~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          225 FLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHhCchhcCCCCCEEEECCCccccc
Confidence            999764  23688999999876654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.77  E-value=4e-18  Score=131.69  Aligned_cols=193  Identities=15%  Similarity=0.171  Sum_probs=130.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|++......     ...+.. ....+.++.+|++|.+++.++++..     ++|
T Consensus        13 tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   87 (248)
T 2pnf_A           13 TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAV-----AEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID   87 (248)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHH-----HHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            79999999999999999999999999976542110     001111 1347889999999999998888642     799


Q ss_pred             EEEecCCCCh--------------------hhhHH----HHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~----~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||+++...                    .++..    ++..+.  +.+++|++||...+...           .+...
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  156 (248)
T 2pnf_A           88 ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----------VGQVN  156 (248)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----------CCCch
Confidence            9999998531                    12222    333332  56899999997654221           12334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..++++++++|+.++++.... ....+........+         ...+++++|+|++++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  226 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIP---------LGRFGSPEEVANVVL  226 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCC---------CCCccCHHHHHHHHH
Confidence            6 88988877653       357899999999999885321 11122222222211         124788999999999


Q ss_pred             HHhcCC--CCCCceEEecCCc
Q 025702          201 QVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (249)
                      .++...  ...|+.|++.+|.
T Consensus       227 ~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          227 FLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhhcCCCcEEEeCCCc
Confidence            999763  2358899998863

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.77  E-value=5.4e-18  Score=131.42  Aligned_cols=192  Identities=15%  Similarity=0.159  Sum_probs=130.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++......        ..+...++.++.+|++|.++++++++..     ++|+
T Consensus        12 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A           12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL--------AAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986442110        0111357889999999999888887642     5899


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREAD------------------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||++|....                        .++.++..++ ...++|++||...+..           ..+...| 
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  152 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP-----------IEQYAGYS  152 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC-----------CTTBHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCC-----------CCCCccHH
Confidence            9999986311                        1234455554 2289999999887532           1223346 


Q ss_pred             cchHHHHHHHhh-------c--CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCe-e-ecC--CCcceEeeeeHHHHH
Q 025702          130 KGKLNTESVLES-------K--GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-P-IPG--SGIQVTQLGHVKDLA  196 (249)
Q Consensus       130 ~~k~~~e~~~~~-------~--~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~~~i~~~D~a  196 (249)
                      .+|...+.+.+.       .  +++++++||++++++..     ....    ..... . +..  .......+.+++|+|
T Consensus       153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-----~~~~----~~~~~~~~~~~~~~~~p~~~~~~~~dvA  223 (253)
T 1hxh_A          153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM-----QASL----PKGVSKEMVLHDPKLNRAGRAYMPERIA  223 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH-----HHHS----CTTCCHHHHBCBTTTBTTCCEECHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchh-----hhcc----chhhhHHHHhhhhccCccCCCCCHHHHH
Confidence            899988876532       3  89999999999998731     1100    00000 0 000  011123478999999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCcc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +++++++..+.  ..|+.+++.+|..
T Consensus       224 ~~~~~l~s~~~~~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          224 QLVLFLASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred             HHHHHHcCccccCCCCcEEEECCCcc
Confidence            99999997642  3588999988753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.77  E-value=2.9e-18  Score=132.40  Aligned_cols=191  Identities=14%  Similarity=0.118  Sum_probs=130.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|+||+++++.|+++|++|++++|++....... .         ..++.++.+|++|.++++++++.. ++|+|||+
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~---------~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A           12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K---------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G---------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h---------ccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999999865422111 0         136889999999999998776643 79999999


Q ss_pred             CCCChh--------------------hhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           80 NGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        80 ~~~~~~--------------------~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      +|....                    +...++++    +.  +..++|++||...+...          +.+...| .+|
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y~~sK  151 (246)
T 2ag5_A           82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------VVNRCVYSTTK  151 (246)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------CTTBHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------CCCCccHHHHH
Confidence            985311                    12223333    32  56799999997764221          1123346 899


Q ss_pred             HHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-----HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       133 ~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      ...+.+.+       ..+++++++||++++++......     ............+         ...+.+++|+|++++
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~v~  222 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCV  222 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC---------CCCCCCHHHHHHHHH
Confidence            98887753       34899999999999997411100     0111122222111         113678999999999


Q ss_pred             HHhcCCC--CCCceEEecCCcc
Q 025702          201 QVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +++..+.  ..|+.+++.+|..
T Consensus       223 ~l~s~~~~~~tG~~i~vdgG~~  244 (246)
T 2ag5_A          223 YLASDESAYVTGNPVIIDGGWS  244 (246)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHhCccccCCCCCEEEECCCcc
Confidence            9997542  3688999988753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.77  E-value=1.4e-17  Score=128.82  Aligned_cols=193  Identities=13%  Similarity=0.055  Sum_probs=122.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++...               ..++.++.+|++|.+++.++++..     ++|+
T Consensus        13 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X           13 TGAGKGIGYATALAFVEAGAKVTGFDQAFTQE---------------QYPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS---------------CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh---------------cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986521               123788899999999988888642     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|...                    .+...+++++    +  +..++|++||...+..           ..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  146 (250)
T 2fwm_X           78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP-----------RIGMSAY  146 (250)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----------CCCCchH
Confidence            999998521                    1223344433    3  5789999999877521           1233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH-HHHH-HHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-WFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                       .+|...+.+.+       ..++++++++|+.++++........ .... .......  ..........+.+++|+|+++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~p~dvA~~v  224 (250)
T 2fwm_X          147 GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE--QFKLGIPLGKIARPQEIANTI  224 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhh--cccccCCCCCCcCHHHHHHHH
Confidence             89998887653       3589999999999998852211000 0000 0000000  000011123478899999999


Q ss_pred             HHHhcCC--CCCCceEEecCCccc
Q 025702          200 VQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++++..+  ...|+.+++.+|..+
T Consensus       225 ~~l~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          225 LFLASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHhCccccCCCCCEEEECCCccc
Confidence            9999764  236889999887643

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.77  E-value=3.6e-18  Score=133.51  Aligned_cols=194  Identities=18%  Similarity=0.189  Sum_probs=133.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|........+    ...+......+.++.+|++|.++++++++..     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           34 TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEV----VAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999998654321111    1122222457899999999999988888643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+...++++    +.  +..++|++||...+..           ......|
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  178 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG-----------NPGQANY  178 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-----------CCCchhH
Confidence            999998631                    122333333    22  5679999999776422           1223346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+.++..... .   .....+..++         ..+.+++|+|+++++
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~---~~~~~~~~p~---------~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL-A---AEKLLEVIPL---------GRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH-H---HHHHGGGCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc-c---HHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence             89987776642       3589999999999998853221 1   1222222221         245679999999999


Q ss_pred             HhcCCC---CCCceEEecCCcccc
Q 025702          202 VLGNEK---ASRQVFNISGEKYVT  222 (249)
Q Consensus       202 ~~~~~~---~~~~~~~i~~~~~~s  222 (249)
                      +++.+.   ..|+.+++.+|..++
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCCC
T ss_pred             HhCCcccCCCcCCEEEECCCeecC
Confidence            998742   358999999987653

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.77  E-value=2e-17  Score=130.03  Aligned_cols=212  Identities=14%  Similarity=0.148  Sum_probs=138.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCc-------hhhhhccCceEEEEeccCCHHHHHHhhhhC--
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--   71 (249)
                      |||+|+||+++++.|+++|++|++++|+.............       ..+.....++.++.+|++|++++.++++..  
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   98 (278)
T 3sx2_A           19 TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLD   98 (278)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999985432111111111       112223468999999999999998888643  


Q ss_pred             ---CCcEEEecCCCCh----------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           72 ---GFDVVYDINGREA----------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        72 ---~~d~Vi~~~~~~~----------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                         ++|++||+||...                .+...++++    +.  + ..++|++||...+....       .+..+
T Consensus        99 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~~~~~  171 (278)
T 3sx2_A           99 ELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG-------SADPG  171 (278)
T ss_dssp             HHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC-------CSSHH
T ss_pred             HcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc-------cCCCC
Confidence               7999999998631                123334443    22  2 56899999987642210       11112


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHH-HcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRL-KAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.++||.+.++.............. .............. ..+.+++|+|
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA  250 (278)
T 3sx2_A          172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVA  250 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHH
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHH
Confidence            2346 89988877653       3579999999999999865433322222221 22221112222222 5688999999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++++++++..  ...|+.+++.+|..
T Consensus       251 ~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          251 NAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHhCcccccccCCEEeECCCcc
Confidence            9999999754  34688999988753

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.76  E-value=3.7e-18  Score=133.02  Aligned_cols=196  Identities=18%  Similarity=0.203  Sum_probs=134.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhcc-CceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.... .++.++.+|++|+++++++++..     ++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   90 (262)
T 3pk0_A           16 TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACV-----ADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID   90 (262)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999865522110     1111112 57899999999999988887643     799


Q ss_pred             EEEecCCCCh--------------------hhhHHHH----HhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPIL----DALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~----~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||...                    .+...++    ..++  +..++|++||.....          .+..+...
T Consensus        91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~~~~~~~~  160 (262)
T 3pk0_A           91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------TGYPGWSH  160 (262)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------BCCTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------CCCCCChh
Confidence            9999998531                    1222233    3333  567999999976420          11223345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++.++||.++++.... ....+.....+..+.         ..+.+++|+|++++
T Consensus       161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~  230 (262)
T 3pk0_A          161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE-NGEEYIASMARSIPA---------GALGTPEDIGHLAA  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-TCHHHHHHHHTTSTT---------SSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            6 99998887653       368999999999999874211 112223333333222         23567899999999


Q ss_pred             HHhcCCC--CCCceEEecCCccc
Q 025702          201 QVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      +++....  ..|+.+++.+|..+
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCcCCEEEECCCeec
Confidence            9997543  46899999998754

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.76  E-value=2.8e-18  Score=132.49  Aligned_cols=192  Identities=16%  Similarity=0.192  Sum_probs=123.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEE-ecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||++++++|+++|++|+++ .|++..... .    ...+.....++.++.+|++|.++++++++..     ++|
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A           11 TGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDA-T----AEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHH-H----HHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHH-H----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            7999999999999999999999999 455433111 0    0111112357889999999999998887643     799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHH----hCC--CCCeEEEeecccc-ccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~----a~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~  127 (249)
                      +|||+++...                    .+..++++    .++  +..++|++||... ++.            .+..
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~  153 (247)
T 2hq1_A           86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN------------AGQA  153 (247)
T ss_dssp             EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------CH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------CCCc
Confidence            9999998531                    12222333    332  5679999999743 322            1234


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...|.+.+       ..++++++++|+.+.++... ............+.+         ...+++++|+|+++
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  223 (247)
T 2hq1_A          154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD-VLPDKVKEMYLNNIP---------LKRFGTPEEVANVV  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-TSCHHHHHHHHTTST---------TSSCBCHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh-hcchHHHHHHHhhCC---------CCCCCCHHHHHHHH
Confidence            46 89998887653       24789999999998876311 011112222222221         12478899999999


Q ss_pred             HHHhcCCC--CCCceEEecCCc
Q 025702          200 VQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +.++..+.  ..|+.|++.+|.
T Consensus       224 ~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          224 GFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHcCcccccccCcEEEeCCCc
Confidence            99987642  358899998875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.76  E-value=5.5e-19  Score=137.58  Aligned_cols=197  Identities=14%  Similarity=0.119  Sum_probs=132.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh------CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~------~~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|++......     ...+.....++.++.+|++|.++++++++.      .++|
T Consensus        15 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   89 (260)
T 2ae2_A           15 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDC-----LTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   89 (260)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            79999999999999999999999999986542110     011111134688999999999988887753      3799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||++|...                    .++.++++++    +  +..++|++||...+..           ..+...
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  158 (260)
T 2ae2_A           90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----------VPYEAV  158 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCcch
Confidence            9999998521                    1223344443    2  5679999999876421           122334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      | .+|...+.+.+       ..+++++.++||.+.++....    ......+.......+         ...+.+++|+|
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA  229 (260)
T 2ae2_A          159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA---------LRRMGEPKELA  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST---------TCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC---------CCCCCCHHHHH
Confidence            6 99998887763       347899999999998763100    000000111222111         12478899999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCcccc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      +++++++..+.  ..|+.+++.+|..++
T Consensus       230 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          230 AMVAFLCFPAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHcCccccCCCCCEEEECCCcccc
Confidence            99999987532  368899999887544

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.76  E-value=3.3e-18  Score=133.43  Aligned_cols=183  Identities=17%  Similarity=0.155  Sum_probs=127.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++..                ..++.++.+|++|.++++++++..     ++|+
T Consensus        14 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A           14 TGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654                246788999999999888887642     7999


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|...                    .+    ++.++..++  +..++|++||...+..           ..+...|
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  146 (264)
T 2dtx_A           78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-----------TKNASAY  146 (264)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-----------CCCchhH
Confidence            999998521                    12    222333433  4679999999877532           1233446


Q ss_pred             -cchHHHHHHHhh----cC--CcEEEeecceeeCCCCCcchH-------H----HHHHHHHcCCCeeecCCCcceEeeee
Q 025702          130 -KGKLNTESVLES----KG--VNWTSLRPVYIYGPLNYNPVE-------E----WFFHRLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       130 -~~k~~~e~~~~~----~~--~~~~~~r~~~v~g~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                       .+|...+.+.+.    ..  +++++++||.+.++... ...       .    ..........         ....+++
T Consensus       147 ~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~  216 (264)
T 2dtx_A          147 VTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVR-KAAELEVGSDPMRIEKKISEWGHEH---------PMQRIGK  216 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHH-HHHHHHHCSCHHHHHHHHHHHHHHS---------TTSSCBC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchh-hhhhcccccCchhhHHHHHHHHhcC---------CCCCCcC
Confidence             899988876532    11  89999999999776310 000       0    1111111111         1124788


Q ss_pred             HHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          192 VKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++|+|+++++++..+  ...|+.+++.+|..
T Consensus       217 p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          217 PQEVASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            999999999999764  23688999988764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.76  E-value=3.9e-18  Score=134.17  Aligned_cols=205  Identities=18%  Similarity=0.203  Sum_probs=130.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|+.........    ..+.. ....+.++.+|++|.+++.++++..     ++|
T Consensus        31 TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           31 TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVT----DEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHH----HHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH----HHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            7999999999999999999999999995433211100    01111 1357889999999999988888643     799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||...                    .+...++++    ++  +..++|++||...+..           ......
T Consensus       107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  175 (281)
T 3v2h_A          107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA-----------SPFKSA  175 (281)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC-----------CCCchH
Confidence            9999998631                    123334444    23  5679999999776422           122335


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHH-HHHcCCC-eeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRP-IPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+       ..+++++.++||.+.++............ ....... ............+.+++|+|++
T Consensus       176 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~  255 (281)
T 3v2h_A          176 YVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASL  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Confidence            6 99988887653       35799999999999988532111000000 0000000 0111223334568999999999


Q ss_pred             HHHHhcCCC--CCCceEEecCCcc
Q 025702          199 FVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +++++....  ..|+.+++.+|..
T Consensus       256 v~~L~s~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          256 ALYLAGDDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             HHHHHSSGGGGCCSCEEEESTTGG
T ss_pred             HHHHcCCCcCCCCCcEEEECCCcc
Confidence            999997653  3689999988754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.76  E-value=3.6e-18  Score=134.83  Aligned_cols=222  Identities=16%  Similarity=0.127  Sum_probs=138.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCc-------hhhhhccCceEEEEeccCCHHHHHHhhhhC--
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--   71 (249)
                      |||+|+||+++++.|+++|++|++++|+.............       ..+.....++.++.+|++|.+++.++++..  
T Consensus        16 TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   95 (287)
T 3pxx_A           16 TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVA   95 (287)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999985442221111111       112223467899999999999988877643  


Q ss_pred             ---CCcEEEecCCCCh------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           72 ---GFDVVYDINGREA------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        72 ---~~d~Vi~~~~~~~------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                         ++|++||+||...                  .+...++++    +.+..++|++||...+......+..+..+..+.
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  175 (287)
T 3pxx_A           96 EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGG  175 (287)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHH
T ss_pred             HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCcc
Confidence               7999999998631                  123334444    334569999999877643222222222222233


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCC-----eeecCCCcceEeeeeHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP-----IPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~  193 (249)
                      ..| .+|...+.+.+       ..+++++.++||.+.++..........+........     ............+.+++
T Consensus       176 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  255 (287)
T 3pxx_A          176 AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEAS  255 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccCCCCCCHH
Confidence            346 89988887653       348999999999999986432111110000000000     00000011114678999


Q ss_pred             HHHHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          194 DLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      |+|+++++++...  ...|+.+++.+|..++
T Consensus       256 dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          256 DISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            9999999999754  3468999999987654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.76  E-value=6.4e-18  Score=131.32  Aligned_cols=197  Identities=14%  Similarity=0.143  Sum_probs=134.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEE-ecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||+++++.|+++|++|+++ .|+.......     ...+.....++.++.+|++|.++++++++..     ++|
T Consensus        10 TGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (258)
T 3oid_A           10 TGSSRGVGKAAAIRLAENGYNIVINYARSKKAALET-----AEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD   84 (258)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999997 6664432110     0112222457899999999999998888743     789


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||...                    .++..++++    ++  +..++|++||...+..           ..+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  153 (258)
T 3oid_A           85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY-----------LENYTT  153 (258)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-----------CTTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-----------CCCcHH
Confidence            9999998521                    122333333    23  4579999999876522           223445


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.+       ..+++++.++||.+.++..... .............++         ..+.+++|+|+++
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~v  224 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA---------GRMVEIKDMVDTV  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT---------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHH
Confidence            6 99998887653       3578999999999988742211 112223333332222         2467799999999


Q ss_pred             HHHhcCCC--CCCceEEecCCcccc
Q 025702          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      +++++...  ..|+.+++.+|..+.
T Consensus       225 ~~L~s~~~~~itG~~i~vdGG~~~~  249 (258)
T 3oid_A          225 EFLVSSKADMIRGQTIIVDGGRSLL  249 (258)
T ss_dssp             HHHTSSTTTTCCSCEEEESTTGGGB
T ss_pred             HHHhCcccCCccCCEEEECCCccCC
Confidence            99998643  368999999987543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.76  E-value=4.4e-18  Score=132.73  Aligned_cols=196  Identities=17%  Similarity=0.182  Sum_probs=134.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++|+.......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        17 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (264)
T 3ucx_A           17 SGVGPALGTTLARRCAEQGADLVLAARTVERLEDV-----AKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV   91 (264)
T ss_dssp             ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            79999999999999999999999999986542111     1122222467899999999999988888643     7999


Q ss_pred             EEecCCCC---------------------hhhhHHHHHhCC-----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGRE---------------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~---------------------~~~~~~~~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+|+..                     ..+...+++++.     +..++|++||...+..           ..+...|
T Consensus        92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  160 (264)
T 3ucx_A           92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS-----------QAKYGAY  160 (264)
T ss_dssp             EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC-----------CCccHHH
Confidence            99999752                     112333444432     2369999999876522           2233356


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch----------HHHHHHHHHcCCCeeecCCCcceEeeee
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV----------EEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                       .+|...+.+.+       ..+++++.++||.++++......          ...+........+         ...+.+
T Consensus       161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~  231 (264)
T 3ucx_A          161 KMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSD---------LKRLPT  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSS---------SSSCCB
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCC---------cccCCC
Confidence             89988877653       36899999999999887311100          0111222222222         234678


Q ss_pred             HHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          192 VKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++|+|+++++++...  ...|+.+++.+|..+
T Consensus       232 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          232 EDEVASAILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            999999999999753  346899999998753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.76  E-value=5.8e-18  Score=130.79  Aligned_cols=195  Identities=16%  Similarity=0.178  Sum_probs=134.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+.......     ...+.....++.++.+|++|.++++++++..     ++|+
T Consensus        11 TGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (247)
T 3lyl_A           11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKF-----ENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI   85 (247)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986552211     1112222457899999999999988887643     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|...                    .+...++++    +.  +..++|++||...+..           ..+...|
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  154 (247)
T 3lyl_A           86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG-----------NPGQTNY  154 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------CTTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----------CCCcHHH
Confidence            999998631                    122333333    22  5569999999776532           1223446


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+.++.... .............+         ...+.+++|+|+++++
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~i~~  224 (247)
T 3lyl_A          155 CAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK-LTDEQKSFIATKIP---------SGQIGEPKDIAAAVAF  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT-SCHHHHHHHHTTST---------TCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh-ccHHHHHHHhhcCC---------CCCCcCHHHHHHHHHH
Confidence             89987776652       357999999999999875322 11222222222221         2357789999999999


Q ss_pred             HhcCCC--CCCceEEecCCccc
Q 025702          202 VLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      ++....  ..|+.+++.+|..+
T Consensus       225 l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          225 LASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCCcCCccCCEEEECCCEec
Confidence            997643  36899999988654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.76  E-value=1.2e-18  Score=135.70  Aligned_cols=197  Identities=13%  Similarity=0.117  Sum_probs=133.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++......     ...+.....++.++.+|+.|.+++.++++..     ++|+
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   94 (260)
T 2zat_A           20 TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRT-----VATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI   94 (260)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542110     0111112346888999999999888877642     7999


Q ss_pred             EEecCCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+++...                     .+...++++    ++  +..++|++||...+..           ..+...
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  163 (260)
T 2zat_A           95 LVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP-----------FPNLGP  163 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-----------CCCchh
Confidence            999998521                     112223333    33  5679999999887632           123345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH-HHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.+       ..++++++++||.+.++....... ...........         ....+.+++|+|+++
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~v  234 (260)
T 2zat_A          164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESL---------RIRRLGNPEDCAGIV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHH---------TCSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcC---------CCCCCCCHHHHHHHH
Confidence            6 89988887653       348999999999998874211000 00011111111         122477899999999


Q ss_pred             HHHhcCCC--CCCceEEecCCcccc
Q 025702          200 VQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      ++++..+.  ..|+.+++.+|...+
T Consensus       235 ~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          235 SFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHcCcccCCccCCEEEECCCcccc
Confidence            99987643  368899999987665

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.76  E-value=1.7e-18  Score=133.47  Aligned_cols=193  Identities=17%  Similarity=0.197  Sum_probs=128.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEE-ecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||++++++|+++|++|+++ .|++..... +    ...+.....++.++.+|++|.++++++++..     ++|
T Consensus         7 TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEE-V----SKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-H----HHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-H----HHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999995 676433211 0    0112222357889999999999998888642     799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||+++...                    .++.+++++    +.  +..++|++||...+...           .+...
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~  150 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----------IGQAN  150 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----------CCCcc
Confidence            9999998532                    122333333    22  56799999998654221           12334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++++||+.++++.... ....+........+         ...+++++|+|++++
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~  220 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIP---------LGRTGQPENVAGLVE  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCT---------TCSCBCHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhcCC---------CCCCCCHHHHHHHHH
Confidence            6 88988776653       357899999999999873211 11122222222211         124788999999999


Q ss_pred             HHhcCCC---CCCceEEecCCc
Q 025702          201 QVLGNEK---ASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~---~~~~~~~i~~~~  219 (249)
                      +++..+.   ..|+.|++.+|.
T Consensus       221 ~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          221 FLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHhCCCccCCcCCCEEEeCCCc
Confidence            9985432   358899998875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.76  E-value=1.1e-17  Score=129.30  Aligned_cols=191  Identities=15%  Similarity=0.140  Sum_probs=129.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|+||+++++.|+++|++|++++|+......        ...+....+.++.+|++|.+++.++++.. ++|++||+
T Consensus        20 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           20 TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKS--------LGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH--------HHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999997654211        11122357889999999999999988754 69999999


Q ss_pred             CCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           80 NGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        80 ~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      ||...                    .+...++++    +.  +..++|++||...+..           ..+...| .+|
T Consensus        92 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK  160 (249)
T 3f9i_A           92 AGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG-----------NPGQANYCASK  160 (249)
T ss_dssp             CC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C-----------CSCSHHHHHHH
T ss_pred             CCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC-----------CCCCchhHHHH
Confidence            98531                    123333333    22  5679999999876522           1233446 999


Q ss_pred             HHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       133 ~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      ...+.+.+       ..+++++.++||.+.++.... .............+         ...+.+++|+|++++++++.
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~  230 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK-LNEKQREAIVQKIP---------LGTYGIPEDVAYAVAFLASN  230 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC-------CCHHHHHHHHHHCT---------TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCC
Confidence            88777653       357899999999998875321 11122222222221         23467799999999999976


Q ss_pred             CC--CCCceEEecCCcc
Q 025702          206 EK--ASRQVFNISGEKY  220 (249)
Q Consensus       206 ~~--~~~~~~~i~~~~~  220 (249)
                      +.  ..|+.+++.+|..
T Consensus       231 ~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          231 NASYITGQTLHVNGGML  247 (249)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             ccCCccCcEEEECCCEe
Confidence            43  3589999998764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=8.6e-19  Score=137.01  Aligned_cols=207  Identities=15%  Similarity=0.159  Sum_probs=136.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|+........     ..+..  ...++.++.+|++|++++.++++..     ++
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (267)
T 2gdz_A           13 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCK-----AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   87 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421100     00000  0246889999999999998887642     68


Q ss_pred             cEEEecCCCChh----------------hhHHHHHhCC--C---CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           74 DVVYDINGREAD----------------EVEPILDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        74 d~Vi~~~~~~~~----------------~~~~~~~a~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      |+|||++|....                .++.++.+++  +   ..++|++||...+...           .+...| .+
T Consensus        88 d~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~s  156 (267)
T 2gdz_A           88 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----------AQQPVYCAS  156 (267)
T ss_dssp             CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTCHHHHHH
T ss_pred             CEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------CCCchHHHH
Confidence            999999986311                2344555554  2   5799999998875321           123346 88


Q ss_pred             hHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCe-eecCCCcceEeeeeHHHHHHHHHH
Q 025702          132 KLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       132 k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      |...+.+.+         ..++++++++||.+.++.... ....  .....-... ...........+++++|+|+++++
T Consensus       157 K~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~  233 (267)
T 2gdz_A          157 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKE--ENMGQYIEYKDHIKDMIKYYGILDPPLIANGLIT  233 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCH--HHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccc--cccchhhhHHHHHHHHhccccCCCHHHHHHHHHH
Confidence            988776543         357899999999998763100 0000  000000000 000000011346789999999999


Q ss_pred             HhcCCCCCCceEEecCCccccHHHH
Q 025702          202 VLGNEKASRQVFNISGEKYVTFDGL  226 (249)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~~l  226 (249)
                      +++.+...|+.+++.+++.+++.|+
T Consensus       234 l~s~~~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          234 LIEDDALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHCTTCSSCEEEEETTTEEEECCC
T ss_pred             HhcCcCCCCcEEEecCCCcccccCc
Confidence            9987666789999999888776553

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.76  E-value=7.4e-18  Score=130.72  Aligned_cols=191  Identities=16%  Similarity=0.141  Sum_probs=130.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++......        ..+...++.++.+|++|.+++.++++..     ++|+
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A           11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT--------ARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542111        0111346888999999999888877632     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|....                    +    ++.++..++  +..++|++||...+..           ..+...|
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  151 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------LALTSSY  151 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------CCCchhH
Confidence            9999985311                    1    234555554  5789999999877522           1233446


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeee-eHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG-HVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~D~a~~~~  200 (249)
                       .+|...+.+.+       ..++++++++||.++++.     ...    ... ..............+. +++|+|++++
T Consensus       152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-----~~~----~~~-~~~~~~~~~~p~~~~~~~~~dvA~~v~  221 (254)
T 1hdc_A          152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-----TAE----TGI-RQGEGNYPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHH----HTC-CCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc-----ccc----cch-hHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence             89988887653       357899999999998872     111    111 1000001111112356 8999999999


Q ss_pred             HHhcCC--CCCCceEEecCCcc
Q 025702          201 QVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++..+  ...|+.+++.+|..
T Consensus       222 ~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          222 KLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhCchhcCCCCCEEEECCCcc
Confidence            999764  23688999988864

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.76  E-value=1.1e-17  Score=130.06  Aligned_cols=187  Identities=16%  Similarity=0.157  Sum_probs=131.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++......        ..+....+.++.+|++|.+++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A           13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM--------AAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542110        0111235888999999999988887642     7999


Q ss_pred             EEecCCCChh--------------------hh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|....                    +.    +.++..++  +..++|++||...+...           .+...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  153 (260)
T 1nff_A           85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VACHGY  153 (260)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----------CCchhH
Confidence            9999985311                    11    33444444  56899999998875321           123346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++++|||.++++...  .         ....+.    ......+.+++|+|+++++
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~---------~~~~~~----~~~~~~~~~~~dvA~~v~~  218 (260)
T 1nff_A          154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--W---------VPEDIF----QTALGRAAEPVEVSNLVVY  218 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--T---------SCTTCS----CCSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--c---------chhhHH----hCccCCCCCHHHHHHHHHH
Confidence             89988887653       35899999999999998421  0         001110    0112346889999999999


Q ss_pred             HhcCCC--CCCceEEecCCccc
Q 025702          202 VLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      ++..+.  ..|+.|++.+|..+
T Consensus       219 l~s~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          219 LASDESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCccccCCcCCEEEECCCeec
Confidence            997542  35889999998754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.76  E-value=7.9e-18  Score=131.93  Aligned_cols=196  Identities=13%  Similarity=0.110  Sum_probs=129.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh------CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~------~~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|++......     ...+.....++.++.+|++|++++.++++.      .++|
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  101 (273)
T 1ae1_A           27 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC-----LEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN  101 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            79999999999999999999999999986542110     011111235788999999999988887753      3799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||++|...                    .+...++++    ++  +..++|++||...+...           .+...
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~  170 (273)
T 1ae1_A          102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----------PSVSL  170 (273)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----------TTCHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----------CCcch
Confidence            9999998631                    122333443    22  56799999998876321           22344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH-----HHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      | .+|...+.+.+       ..++++++++||.++++.......     ...........++         ..+.+++|+
T Consensus       171 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dv  241 (273)
T 1ae1_A          171 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEV  241 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            6 89988887653       348999999999999985321110     1111122111111         236789999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      |+++++++...  ...|+.+++.+|..+
T Consensus       242 A~~v~~l~s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          242 SALIAFLCFPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCccccCcCCCEEEECCCccc
Confidence            99999998753  236889999988643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.76  E-value=1.7e-18  Score=136.89  Aligned_cols=197  Identities=20%  Similarity=0.232  Sum_probs=133.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+........    .........++.++.+|++|+++++++++..     ++|+
T Consensus        53 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           53 TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANET----KQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999875421110    0111222457899999999999888887643     7999


Q ss_pred             EEecCCCCh---------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA---------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||+|+...                     .+...++++    +++..++|++||...+...           .+...| 
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~  197 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN-----------ETLIDYS  197 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC-----------TTCHHHH
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC-----------CCChhHH
Confidence            999988521                     123334444    3345699999998876321           123346 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|...+.+.+       ..+++++.++||.++++..............         ........+.+++|+|++++++
T Consensus       198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L  268 (291)
T 3ijr_A          198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF---------GSNVPMQRPGQPYELAPAYVYL  268 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHT---------TTTSTTSSCBCGGGTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHH---------HccCCCCCCcCHHHHHHHHHHH
Confidence            99988887653       3489999999999998831100001111111         1112223567899999999999


Q ss_pred             hcCCC--CCCceEEecCCccc
Q 025702          203 LGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       203 ~~~~~--~~~~~~~i~~~~~~  221 (249)
                      +....  ..|+.+++.+|..+
T Consensus       269 ~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCCC
T ss_pred             hCCccCCCcCCEEEECCCccc
Confidence            97643  46889999888654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.75  E-value=7.9e-18  Score=132.41  Aligned_cols=206  Identities=15%  Similarity=0.079  Sum_probs=133.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCC-CCCCc-------hhhhhccCceEEEEeccCCHHHHHHhhhhC-
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQL-PGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~-------~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-   71 (249)
                      |||+|+||++++++|+++|++|++++|+........ .....       ..+......+.++.+|++|.++++++++.. 
T Consensus        21 TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (280)
T 3pgx_A           21 TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGM  100 (280)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            799999999999999999999999999643211100 00000       112223467889999999999998888643 


Q ss_pred             ----CCcEEEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCC
Q 025702           72 ----GFDVVYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCET  120 (249)
Q Consensus        72 ----~~d~Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~  120 (249)
                          ++|++||+||...                    .+...++++    +.  + ..++|++||...+..         
T Consensus       101 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  171 (280)
T 3pgx_A          101 EQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA---------  171 (280)
T ss_dssp             HHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC---------
Confidence                7999999998631                    122333333    22  2 568999999876422         


Q ss_pred             CCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHc-CCCeeecCCCcceEeeee
Q 025702          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA-GRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~  191 (249)
                        ......| .+|...+.+.+       ..+++++.++||.++++..........+..... ...+.. ...... .+.+
T Consensus       172 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-r~~~  247 (280)
T 3pgx_A          172 --TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP-MPVQPN-GFMT  247 (280)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC-BTTBCS-SCBC
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh-cccCCC-CCCC
Confidence              1223346 99988877653       368999999999999986432221111111100 001111 111112 4889


Q ss_pred             HHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++|+|+++++++....  ..|+.+++.+|.
T Consensus       248 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          248 ADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            9999999999997643  368899998875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.75  E-value=2.6e-18  Score=134.10  Aligned_cols=201  Identities=15%  Similarity=0.214  Sum_probs=134.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhh-hhccCceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|+........     ..+ .....++.++.+|++|.++++++++.     .++|
T Consensus        20 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   94 (265)
T 1h5q_A           20 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT-----EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS   94 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH-----HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHH-----HHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999765421110     011 11135788999999999988887763     2599


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHhC----C--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREA--------------------DEVEPILDAL----P--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a~----~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +|||+++...                    .++.++++++    .  + ..++|++||...+.....    ...+..+..
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~  170 (265)
T 1h5q_A           95 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSLTQV  170 (265)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEECSCH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccccccccc
Confidence            9999998631                    1233344442    2  2 478999999876532110    011223445


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++++||+.++++.... ..+..........++         ..+.+++|+|+++
T Consensus       171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~  240 (265)
T 1h5q_A          171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIPL---------NRFAQPEEMTGQA  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTT---------SSCBCGGGGHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc-cchhHHHHHHhcCcc---------cCCCCHHHHHHHH
Confidence            57 99998887763       347999999999999885321 112222222222211         2367899999999


Q ss_pred             HHHhcCCC--CCCceEEecCCcc
Q 025702          200 VQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++++..+.  ..|+.|++.+|..
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          241 ILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhhccCchhcCcCcEEEecCCEe
Confidence            99997642  3688999998864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.75  E-value=7.2e-18  Score=131.00  Aligned_cols=197  Identities=15%  Similarity=0.180  Sum_probs=133.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+.......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   86 (257)
T 3imf_A           12 TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEA-----KLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI   86 (257)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987552211     0111122457899999999999988888643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----C-C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----L-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+||...                    .+...+.++    + +  +..++|++||...+..           ......
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  155 (257)
T 3imf_A           87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA-----------GPGVIH  155 (257)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC-----------CTTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC-----------CCCcHH
Confidence            999998521                    122233333    2 2  3679999999876522           122334


Q ss_pred             c-cchHHHHHHHh--------hcCCcEEEeecceeeCCCCCcch--HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~~--------~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|...+.+.+        ..+++++.++||.+.++......  ...+........+         ...+.+++|+|+
T Consensus       156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~  226 (257)
T 3imf_A          156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVP---------LGRLGTPEEIAG  226 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTST---------TCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCC---------CCCCcCHHHHHH
Confidence            6 88987776542        45899999999999988532211  0111111112111         224678999999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCcccc
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      ++++++....  ..|+.+++.+|..++
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          227 LAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHHHcCchhcCccCCEEEECCCcccC
Confidence            9999997643  368999999987654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.75  E-value=1.4e-17  Score=131.77  Aligned_cols=219  Identities=13%  Similarity=0.023  Sum_probs=143.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|+||++++++|+++|++|++++|+..+......        +...+++++.+|++|.++++++++.. ++|++||+
T Consensus        22 TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           22 TGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR--------TMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT--------TSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            7999999999999999999999999998765322111        11357899999999999999998854 78999999


Q ss_pred             CCCC------------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCC-CCCC-CCCCCCCCCcc-cchHHHH
Q 025702           80 NGRE------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-LPHC-ETDTVDPKSRH-KGKLNTE  136 (249)
Q Consensus        80 ~~~~------------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~-~~~~-e~~~~~~~~~~-~~k~~~e  136 (249)
                      ||..                  ..+...+++++.  ..+++|++||...+..... .... +..+..+...| .+|...+
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  173 (291)
T 3rd5_A           94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANL  173 (291)
T ss_dssp             CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHH
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHH
Confidence            9852                  123555666644  3459999999887643221 1111 11223334456 9998877


Q ss_pred             HHHh-------hcC--CcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC
Q 025702          137 SVLE-------SKG--VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       137 ~~~~-------~~~--~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (249)
                      .+.+       ..+  ++++.++||.+..+..... ...+...... .        ...+-..+++|+|+++++++..+.
T Consensus       174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~-~--------~~~~~~~~~~~~A~~~~~l~~~~~  243 (291)
T 3rd5_A          174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS-GRKLGDALMS-A--------ATRVVATDADFGARQTLYAASQDL  243 (291)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc-chHHHHHHHH-H--------HHHHHhCCHHHHHHHHHHHHcCCC
Confidence            7652       234  8999999999988742111 1111100000 0        011223458999999999998876


Q ss_pred             CCCceEEecCCcc---------------ccHHHHHHHHHHHhCCC
Q 025702          208 ASRQVFNISGEKY---------------VTFDGLARACAKVTGYC  237 (249)
Q Consensus       208 ~~~~~~~i~~~~~---------------~s~~~l~~~~~~~~g~~  237 (249)
                      ..|+.+.+.+|..               -...++|+...+.+|..
T Consensus       244 ~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~  288 (291)
T 3rd5_A          244 PGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTE  288 (291)
T ss_dssp             CTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHccc
Confidence            6788888765431               12357888888888753

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.75  E-value=1.7e-18  Score=133.55  Aligned_cols=193  Identities=12%  Similarity=0.197  Sum_probs=129.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEE-ecCCCccccCCCCCCchhhhhccCceEE-EEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLF-TRGKAPIAQQLPGESDQEFAEFSSKILH-LKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|+||++++++|+++|++|+++ +|++......     ...+.....++.. +.+|++|.++++++++.     .++
T Consensus         7 TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEV-----AEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHH-----HHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-----HHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999998 6765432110     0111111245666 89999999988887653     279


Q ss_pred             cEEEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |+|||+++...                    .+    ++.++..++  +.+++|++||...+...           .+..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~  150 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-----------PGQA  150 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------SSBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-----------CCCc
Confidence            99999998531                    11    334445554  67899999997654221           1233


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++++||+.++++.... .............+         ...+++++|+|+++
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~  220 (245)
T 2ph3_A          151 NYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIP---------AGRFGRPEEVAEAV  220 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHH
Confidence            46 88988776653       248999999999998874211 11122222222221         12477999999999


Q ss_pred             HHHhcCCC--CCCceEEecCCc
Q 025702          200 VQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +.++..+.  ..|+.|++.+|.
T Consensus       221 ~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          221 AFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCcccccccCCEEEECCCC
Confidence            99997642  358899998864

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.75  E-value=8.5e-18  Score=131.16  Aligned_cols=186  Identities=18%  Similarity=0.174  Sum_probs=128.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.....                ....+.+|++|.+.+.++++..     ++|+
T Consensus        34 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           34 TGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------ADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999866521                2234478999998887776532     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+...+++++    +  +..++|++||...+..           ..+...|
T Consensus        98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  166 (266)
T 3uxy_A           98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-----------GPGHALY  166 (266)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCCChHH
Confidence            999998632                    1233344442    3  5779999999776421           2233446


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc------hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                       .+|...+.+.+       ..+++++.++||.+.++.....      .............         ....+.+++|+
T Consensus       167 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedv  237 (266)
T 3uxy_A          167 CLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV---------PLGRIAEPEDI  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS---------TTSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC---------CCCCCcCHHHH
Confidence             99998887653       3589999999999988731000      0011112222221         22356789999


Q ss_pred             HHHHHHHhcCCC--CCCceEEecCCcccc
Q 025702          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      |++++++++...  ..|+.+++.+|..++
T Consensus       238 A~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          238 ADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            999999997643  358999999987653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.75  E-value=5.2e-18  Score=133.78  Aligned_cols=193  Identities=17%  Similarity=0.231  Sum_probs=128.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++......     ...+.....++.++.+|++|.++++++++.     .++|+
T Consensus        50 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~  124 (285)
T 2c07_A           50 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSV-----VDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI  124 (285)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-----HHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999988875442110     011111135688999999999999888753     27999


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+||...                    .+    ++.++..+.  +..++|++||...+...           .+...|
T Consensus       125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  193 (285)
T 2c07_A          125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-----------VGQANY  193 (285)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------CCCchH
Confidence            999998531                    12    222333333  56899999998764321           123346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..++++++++||.+.++.... ....+........+.         ..+++++|+|++++.
T Consensus       194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPA---------GRMGTPEEVANLACF  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCCC---------CCCCCHHHHHHHHHH
Confidence             89988777653       358999999999999875321 112222222222111         237889999999999


Q ss_pred             HhcCCC--CCCceEEecCCc
Q 025702          202 VLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++..+.  ..|+.+++.+|.
T Consensus       264 l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCCcCCCCCCEEEeCCCc
Confidence            997643  368899998875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.75  E-value=1.7e-17  Score=129.68  Aligned_cols=186  Identities=15%  Similarity=0.180  Sum_probs=129.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+....               ...+..+.+|++|.+++.++++..     ++|+
T Consensus        20 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           20 TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------------cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987552               135678899999999988888643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+...++++    +.  +..++|++||...+..           ..+...|
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  153 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA-----------TKNAAAY  153 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------CCCChhH
Confidence            999998631                    122223333    33  5679999999887632           1223456


Q ss_pred             -cchHHHHHHHh----h--cCCcEEEeecceeeCCCCCc----------chHHHHHHHHHcCCCeeecCCCcceEeeeeH
Q 025702          130 -KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (249)
Q Consensus       130 -~~k~~~e~~~~----~--~~~~~~~~r~~~v~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (249)
                       .+|...+.+.+    +  .+++++.++||.+.++....          ..............+         ...+.++
T Consensus       154 ~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p  224 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP---------MGRIGRP  224 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST---------TSSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC---------CCCCcCH
Confidence             99998887653    2  27899999999998873100          000111222222211         1246779


Q ss_pred             HHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          193 KDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      +|+|+++++++...  ...|+.+++.+|...
T Consensus       225 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  255 (269)
T 3vtz_A          225 EEVAEVVAFLASDRSSFITGACLTVDGGLLS  255 (269)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCCccCCCcCcEEEECCCccc
Confidence            99999999999764  236899999998643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.74  E-value=8.6e-18  Score=132.08  Aligned_cols=200  Identities=16%  Similarity=0.159  Sum_probs=136.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+.......     ...+......+.++.+|++|.+++.++++..     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   88 (280)
T 3tox_A           14 TGASSGIGRAAALLFAREGAKVVVTARNGNALAEL-----TDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT   88 (280)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHH-----HHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542110     0111122457889999999999988887642     7999


Q ss_pred             EEecCCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+||...                     .+...++++    +.  +..++|++||...+..          +..+...
T Consensus        89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~  158 (280)
T 3tox_A           89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----------GFAGVAP  158 (280)
T ss_dssp             EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------CCTTCHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------CCCCchh
Confidence            999998521                     122233333    22  4569999999776411          1223344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch---HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|...+.+.+       ..+++++.++||.+.++......   .+..........++         ..+.+++|+|+
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~  229 (280)
T 3tox_A          159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL---------KRIARPEEIAE  229 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT---------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc---------CCCcCHHHHHH
Confidence            6 99988887653       35799999999999998532211   11222222222221         24677999999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCccccHH
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEKYVTFD  224 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~~s~~  224 (249)
                      +++++++...  ..|+.+++.+|..++..
T Consensus       230 ~v~~L~s~~a~~itG~~i~vdGG~~~~~~  258 (280)
T 3tox_A          230 AALYLASDGASFVTGAALLADGGASVTKA  258 (280)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGCC-
T ss_pred             HHHHHhCccccCCcCcEEEECCCcccccc
Confidence            9999997643  36899999999876654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.74  E-value=3.3e-17  Score=128.57  Aligned_cols=194  Identities=15%  Similarity=0.190  Sum_probs=133.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+......        ...+....+.++.+|++|.++++++++..     ++|+
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           33 TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVR--------VANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211        11112457889999999999988888643     7999


Q ss_pred             EEecCCCCh--------------------hhhH----HHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~----~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+..    .++..++  +..++|++||...+..           ..+...|
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  173 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA-----------IADRTAY  173 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC-----------CCCChhH
Confidence            999998521                    1222    2333334  4569999999877522           2233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                       .+|...+.+.+       ..+++++.++||.+.++....     ..............         ....+.+++|+|
T Consensus       174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~~pedvA  244 (277)
T 4dqx_A          174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA---------VMDRMGTAEEIA  244 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS---------TTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC---------cccCCcCHHHHH
Confidence             99988887653       357999999999998763000     00011111122221         123467799999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCcccc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      +++++++....  ..|+.+++.+|..++
T Consensus       245 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          245 EAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            99999997643  368999999987654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.74  E-value=2.1e-18  Score=133.98  Aligned_cols=198  Identities=14%  Similarity=0.072  Sum_probs=123.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC--CCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--~~d~Vi~   78 (249)
                      |||+|+||+++++.|+++|++|++++|++.+..               .  . +.+|++|.++++++++..  ++|+|||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~--~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------A--D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C--C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------c--c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            799999999999999999999999999875521               1  1 568999999999988743  6799999


Q ss_pred             cCCCCh-------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCC-----------------CC
Q 025702           79 INGREA-------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCET-----------------DT  122 (249)
Q Consensus        79 ~~~~~~-------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~-----------------~~  122 (249)
                      +||...             .+...++++    ++  +..++|++||...+......+..+.                 .+
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (257)
T 1fjh_A           69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE  148 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred             CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence            998643             123333443    22  4579999999888732111000000                 11


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      ..+...| .+|...+.+.+       ..++++++++||.+.++.................  +.     .....+.+++|
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~d  221 (257)
T 1fjh_A          149 QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK--FV-----PPMGRRAEPSE  221 (257)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CC-----CSTTSCCCTHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHh--cc-----cccCCCCCHHH
Confidence            1123346 89998887653       3589999999999988752111000000011000  00     01123678999


Q ss_pred             HHHHHHHHhcCC--CCCCceEEecCCccccH
Q 025702          195 LARAFVQVLGNE--KASRQVFNISGEKYVTF  223 (249)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~~~s~  223 (249)
                      +|++++++++.+  ...|+.+++.+|..+++
T Consensus       222 vA~~~~~l~~~~~~~~tG~~~~vdgG~~~~~  252 (257)
T 1fjh_A          222 MASVIAFLMSPAASYVHGAQIVIDGGIDAVM  252 (257)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTHHHHH
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECCCccccc
Confidence            999999999765  33688999988865443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.74  E-value=1.2e-17  Score=129.49  Aligned_cols=196  Identities=20%  Similarity=0.178  Sum_probs=135.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++|++.....        ...+...++.++.+|++|.+++.++++..     ++|+
T Consensus        14 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A           14 IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIAR--------IREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998654211        11122467899999999999888777542     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||++|...                    .+...+++++    ++..++|++||...+..           ..+...| .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a  154 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-----------HPGMSVYSA  154 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-----------CTTBHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----------CCCchHHHH
Confidence            999998631                    1233344443    23458999999876532           1233456 9


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-c----hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-P----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      +|...+.+.+       ..+++++.++||.+.++.... .    ....+........++         ..+.+++|+|++
T Consensus       155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~  225 (255)
T 4eso_A          155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNGTADEVARA  225 (255)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCcCHHHHHHH
Confidence            9988877653       358999999999999885321 1    111222222222221         235679999999


Q ss_pred             HHHHhcC-CCCCCceEEecCCccccHH
Q 025702          199 FVQVLGN-EKASRQVFNISGEKYVTFD  224 (249)
Q Consensus       199 ~~~~~~~-~~~~~~~~~i~~~~~~s~~  224 (249)
                      +++++.. ....|+.+++.+|...++.
T Consensus       226 v~~L~s~~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          226 VLFLAFEATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             HHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred             HHHHcCcCcCccCCEEEECCCccccCc
Confidence            9999875 2336899999998776543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.74  E-value=7.5e-18  Score=132.21  Aligned_cols=197  Identities=14%  Similarity=0.101  Sum_probs=131.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+......        ...+...++.++.+|++|++++.++++..     ++|+
T Consensus        35 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           35 TGAGAGIGLAVARRLADEGCHVLCADIDGDAADA--------AATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHH--------HHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211        11122457899999999999888887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+...++++    +.  +..++|++||...+..           ..+...|
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  175 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA-----------VGGTGAY  175 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCchhH
Confidence            999998631                    122223333    32  5578999999776421           2233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCC---CcceEeeeeHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS---GIQVTQLGHVKDLARA  198 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~  198 (249)
                       .+|...+.+.+       ..+++++.++||.++++.     ........ ..........   ......+.+++|+|++
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~pedvA~~  249 (277)
T 3gvc_A          176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM-----QQTAMAMF-DGALGAGGARSMIARLQGRMAAPEEMAGI  249 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----HHHHHTCC-------CCHHHHHHHHHSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch-----HHHhhhcc-hhhHHHHhhhhhhhccccCCCCHHHHHHH
Confidence             99988887653       368999999999998872     11110000 0000000000   0011346789999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCcccc
Q 025702          199 FVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      +++++...  ...|+.+++.+|...+
T Consensus       250 v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          250 VVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHcCCccCCccCcEEEECCcchhc
Confidence            99999764  3468999999987654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.74  E-value=1.1e-17  Score=130.62  Aligned_cols=197  Identities=17%  Similarity=0.219  Sum_probs=132.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|++......     ...+...  ..++.++.+|++|.+++.++++..     ++
T Consensus        19 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   93 (267)
T 1iy8_A           19 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEAS-----KAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   93 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999986542110     0111111  356888999999999988887642     79


Q ss_pred             cEEEecCCCChh-------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        74 d~Vi~~~~~~~~-------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      |+|||++|....                         .++.++..++  +..++|++||...+..           ..+.
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  162 (267)
T 1iy8_A           94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----------IGNQ  162 (267)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----------CSSB
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-----------CCCC
Confidence            999999985311                         0223444444  5689999999876421           1223


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-------chHHHHHHHHHcCCCeeecCCCcceEeeee
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                      ..| .+|...+.+.+       ..+++++.++||.++++....       ..............         ....+.+
T Consensus       163 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~  233 (267)
T 1iy8_A          163 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN---------PSKRYGE  233 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC---------TTCSCBC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC---------CCCCCcC
Confidence            346 89988877653       358999999999998873100       00000000111111         1124678


Q ss_pred             HHHHHHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          192 VKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      ++|+|+++++++..+  ...|+.+++.+|..++
T Consensus       234 ~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          234 APEIAAVVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            999999999998754  2368899999886544

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.74  E-value=1.9e-18  Score=135.73  Aligned_cols=193  Identities=20%  Similarity=0.243  Sum_probs=129.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        28 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (277)
T 2rhc_B           28 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTT-----LKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV  102 (277)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986542110     0111112356889999999999888877632     6999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh------CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA--------------------DEVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |||+||...                    .+...++++      +.  +..++|++||...+..           ..+..
T Consensus       103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~  171 (277)
T 2rhc_B          103 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----------VVHAA  171 (277)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC-----------CCCCc
Confidence            999998521                    122223333      22  3579999999776421           12234


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH-----------HHHHHHHHcCCCeeecCCCcceEe
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-----------EWFFHRLKAGRPIPIPGSGIQVTQ  188 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  188 (249)
                      .| .+|...+.+.+       ..++++++++||.+.++... ...           ...........         ....
T Consensus       172 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r  241 (277)
T 2rhc_B          172 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA-SVREHYSDIWEVSTEEAFDRITARV---------PIGR  241 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH-HHHHHHHHHHTCCHHHHHHHHHHHS---------TTSS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh-hhhhhcccccccchHHHHHHHHhcC---------CCCC
Confidence            46 89988877653       24789999999999887311 110           00111111111         1124


Q ss_pred             eeeHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          189 LGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++++|+|+++++++..+  ...|+.+++.+|.
T Consensus       242 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          242 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            788999999999999764  2368899998874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.74  E-value=4.3e-18  Score=133.21  Aligned_cols=197  Identities=15%  Similarity=0.167  Sum_probs=134.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        32 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (271)
T 4ibo_A           32 TGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQT-----VQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI  106 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHH-----HHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            79999999999999999999999999986542211     0122222457899999999999988888643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHH----HHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~----~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .++..+    +..+.  +..++|++||...+.           +..+...|
T Consensus       107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~-----------~~~~~~~Y  175 (271)
T 4ibo_A          107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL-----------ARATVAPY  175 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------BCTTCHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC-----------CCCCchhH
Confidence            999998631                    122233    33333  557999999977642           12233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|...+.+.+       ..+++++.++||.+.++...... .+.+........++         ..+.+++|+|++++
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~  246 (271)
T 4ibo_A          176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA---------KRWGKPQELVGTAV  246 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT---------CSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence             89988877653       35899999999999887421110 01222223332222         23566899999999


Q ss_pred             HHhcCC--CCCCceEEecCCcccc
Q 025702          201 QVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      +++...  ...|+.+++.+|..++
T Consensus       247 ~L~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          247 FLSASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHhCccccCCCCcEEEECCCeecc
Confidence            998753  2368999999987654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.74  E-value=3e-17  Score=126.90  Aligned_cols=192  Identities=14%  Similarity=0.180  Sum_probs=125.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCC-CccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++|++ .....        .+.....++.++.+|++|.++++++++.     .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A           13 TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--------AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--------HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--------HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999987 33111        1112235788999999999988887653     2799


Q ss_pred             EEEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||++|...                    .+    ++.++..++  +..++|++||...+..           ..+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  153 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----------IEAYTH  153 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------CSSCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----------CCCchh
Confidence            9999998531                    11    222333343  5689999999887532           122344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++.++||.+.++.......... ....+.  +.     .....+.+++|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~--~~-----~~~~~~~~p~dva~~~~  225 (249)
T 2ew8_A          154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVLPN--ML-----QAIPRLQVPLDLTGAAA  225 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------C--TT-----SSSCSCCCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHHHH--hh-----CccCCCCCHHHHHHHHH
Confidence            6 89988887653       358999999999999874210110000 000010  00     11124788999999999


Q ss_pred             HHhcCC--CCCCceEEecCCc
Q 025702          201 QVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++..+  ...|+.+++.+|.
T Consensus       226 ~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          226 FLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHTSGGGTTCCSCEEEESSSC
T ss_pred             HHcCcccCCCCCcEEEECCCc
Confidence            999753  2368899998875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.74  E-value=1.6e-17  Score=129.31  Aligned_cols=203  Identities=15%  Similarity=0.203  Sum_probs=128.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhh----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSA----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~----~~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++|++.......     ..+...  ..++.++.+|++|++++.++++.    .++|
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid   87 (260)
T 2z1n_A           13 TAGSSGLGFASALELARNGARLLLFSRNREKLEAAA-----SRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD   87 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999865421100     011110  12688999999999988887762    2499


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||++|....                    +    ++.++..+.  +..++|++||...+..           ..+...
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  156 (260)
T 2z1n_A           88 ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP-----------WQDLAL  156 (260)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC-----------CCCCch
Confidence            99999985211                    1    234444443  5689999999887532           122334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHH-HHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFF-HRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.+       ..++++++++||+++++........... ....................+.+++|+|+++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  236 (260)
T 2z1n_A          157 SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVV  236 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            6 88988777653       3589999999999999853211000000 0000000000000001112467899999999


Q ss_pred             HHHhcCC--CCCCceEEecCCc
Q 025702          200 VQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++++..+  ...|+.+++.+|.
T Consensus       237 ~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          237 AFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCccccCCCCCEEEeCCCc
Confidence            9999763  3368899998874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.74  E-value=4.6e-17  Score=127.09  Aligned_cols=194  Identities=13%  Similarity=0.115  Sum_probs=127.2

Q ss_pred             CCCccc-chHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~-iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+ ||++++++|+++|++|++++|+........     ..+. ....++.++.+|++|.++++++++..     ++
T Consensus        28 TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  102 (266)
T 3o38_A           28 TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR-----DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL  102 (266)
T ss_dssp             SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHH-----HHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence            799985 999999999999999999999875522110     0111 11357999999999999998888643     78


Q ss_pred             cEEEecCCCCh--------------------hhhHHHHHh----CC---CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        74 d~Vi~~~~~~~--------------------~~~~~~~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      |+|||+++...                    .+...++++    ++   +..++|++||...+.           +..+.
T Consensus       103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~  171 (266)
T 3o38_A          103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-----------AQHSQ  171 (266)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-----------CCTTC
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-----------CCCCC
Confidence            99999998621                    122233333    22   346899999877642           12234


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      ..| .+|...+.+.+       ..+++++.++||.+.++................         ......+.+++|+|++
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---------~~~~~r~~~~~dva~~  242 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLAS---------DEAFGRAAEPWEVAAT  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------CCTTSSCCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHh---------cCCcCCCCCHHHHHHH
Confidence            456 99988887653       368999999999998874221111111111111         1122356789999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCc
Q 025702          199 FVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++++...  ...|+.+++.+|.
T Consensus       243 i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHcCccccCccCCEEEEcCCc
Confidence            99999763  3468899998874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.74  E-value=6.8e-17  Score=126.02  Aligned_cols=193  Identities=15%  Similarity=0.169  Sum_probs=130.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+......        ...+...++.++.+|++|.+++.++++..     ++|+
T Consensus        18 TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           18 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--------QAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHH--------HHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            7999999999999999999999999998765221        11112357899999999999988887643     7999


Q ss_pred             EEecCCCCh--------------------------hhhHHHHHh----CC--------CCCeEEEeeccccccCCCCCCC
Q 025702           76 VYDINGREA--------------------------DEVEPILDA----LP--------NLEQFIYCSSAGVYLKSDLLPH  117 (249)
Q Consensus        76 Vi~~~~~~~--------------------------~~~~~~~~a----~~--------~~~~~i~~Ss~~v~~~~~~~~~  117 (249)
                      |||+++...                          .+...++++    +.        +..++|++||...+...     
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  164 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-----  164 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred             EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-----
Confidence            999998521                          012223333    22        24689999998875321     


Q ss_pred             CCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEee
Q 025702          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                            .+...| .+|...+.+.+       ..++++++++||.+.++.... .............+.        ...+
T Consensus       165 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~--------~~~~  229 (265)
T 2o23_A          165 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVPF--------PSRL  229 (265)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSS--------SCSC
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-cCHHHHHHHHHcCCC--------cCCC
Confidence                  223456 89988776653       358999999999998874211 111111111111111        0236


Q ss_pred             eeHHHHHHHHHHHhcCCCCCCceEEecCCccc
Q 025702          190 GHVKDLARAFVQVLGNEKASRQVFNISGEKYV  221 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (249)
                      ++++|+|++++++++.+...|+.+++.+|..+
T Consensus       230 ~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          230 GDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            78999999999999877667899999888654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.74  E-value=1.1e-17  Score=131.12  Aligned_cols=195  Identities=17%  Similarity=0.186  Sum_probs=122.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|+++.+........+    ...+.....++.++.+|++|.++++++++..     ++|+
T Consensus        32 TGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           32 TGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV----VAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            799999999999999999999988754433311111    1122223467899999999999988888743     7999


Q ss_pred             EEecCCCChh---------------------hhHHHHH----hCC-----CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD---------------------EVEPILD----ALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~~~~~~~----a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |||+||....                     +...+++    .+.     +..++|++||...+...          ...
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~  177 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS----------ATQ  177 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC----------TTT
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC----------CCC
Confidence            9999985311                     1222222    222     25689999997765321          112


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ...| .+|...+.+.+       ..+++++.++||.+.++.......+..........         ....+.+++|+|+
T Consensus       178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~edvA~  248 (272)
T 4e3z_A          178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSV---------PMQRAGMPEEVAD  248 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CC---------TTSSCBCHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcC---------CcCCCcCHHHHHH
Confidence            2336 99988887652       34899999999999988532211111111111111         1223567999999


Q ss_pred             HHHHHhcCCC--CCCceEEecCC
Q 025702          198 AFVQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~  218 (249)
                      ++++++....  ..|+.|++.+|
T Consensus       249 ~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          249 AILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCCccccccCCEEeecCC
Confidence            9999997543  36889999886

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.74  E-value=5.8e-18  Score=134.19  Aligned_cols=209  Identities=17%  Similarity=0.137  Sum_probs=137.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccC---ceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|+||+++++.|+++|++|++++|+.......     ...+.....   ++.++.+|++|.+++.++++..     +
T Consensus        32 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  106 (297)
T 1xhl_A           32 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEET-----KQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK  106 (297)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            79999999999999999999999999986542110     011111122   6889999999999888887642     7


Q ss_pred             CcEEEecCCCChh----------------------hhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREAD----------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        73 ~d~Vi~~~~~~~~----------------------~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +|+|||+||....                      +...++++    +. ...++|++||...+...          ..+
T Consensus       107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~----------~~~  176 (297)
T 1xhl_A          107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA----------HSG  176 (297)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC----------CTT
T ss_pred             CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC----------CCC
Confidence            9999999985311                      11223333    32 22799999998765321          022


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc--hH------HHHHHHHHcCCCeeecCCCcceEee
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VE------EWFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      ...| .+|...+.+.+       ..++++++++||.+.++.....  ..      ..........  .       ....+
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~r~  247 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC--I-------PVGHC  247 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--C-------TTSSC
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc--C-------CCCCC
Confidence            3346 89988877653       3689999999999998741100  00      0011111111  1       11246


Q ss_pred             eeHHHHHHHHHHHhcCC---CCCCceEEecCCccccHHHHHHHHHHH
Q 025702          190 GHVKDLARAFVQVLGNE---KASRQVFNISGEKYVTFDGLARACAKV  233 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~s~~~l~~~~~~~  233 (249)
                      .+++|+|+++++++..+   ...|+.+++.+|..+...+.+..+.+.
T Consensus       248 ~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          248 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence            78999999999998754   346889999999877766655544443

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.74  E-value=5.4e-18  Score=132.58  Aligned_cols=196  Identities=15%  Similarity=0.155  Sum_probs=133.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+.......     ...+.....++.++.+|++|.++++++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (270)
T 3ftp_A           34 TGASRGIGRAIALELARRGAMVIGTATTEAGAEGI-----GAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV  108 (270)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542110     0112222457889999999999888887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+...++++    +.  +..++|++||...+..           ..+...|
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  177 (270)
T 3ftp_A          109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG-----------NPGQVNY  177 (270)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTBHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-----------CCCchhH
Confidence            999998521                    123333433    22  5578999999776522           1223446


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+.++.... .............+         ...+.+++|+|+++++
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~  247 (270)
T 3ftp_A          178 AAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-LPQEQQTALKTQIP---------LGRLGSPEDIAHAVAF  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-SCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-cCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHH
Confidence             99988776652       357999999999998763110 11112222222222         2346789999999999


Q ss_pred             HhcCC--CCCCceEEecCCcccc
Q 025702          202 VLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      ++...  ...|+.+++.+|..+|
T Consensus       248 L~s~~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          248 LASPQAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSCC
T ss_pred             HhCCCcCCccCcEEEECCCcccC
Confidence            99653  3368999999987553

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.74  E-value=1.4e-17  Score=133.36  Aligned_cols=227  Identities=15%  Similarity=0.053  Sum_probs=134.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++.+|+.........+...........++.++.+|++|.+++.++++..     ++|+
T Consensus        11 TGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~   90 (324)
T 3u9l_A           11 TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDV   90 (324)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999975331110000000111122457899999999999998888743     8999


Q ss_pred             EEecCCCC--------------------hhhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGRE--------------------ADEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~--------------------~~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||+||..                    ..++.++++++    +  +..++|++||...+...          ......|
T Consensus        91 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~----------~~~~~~Y  160 (324)
T 3u9l_A           91 LIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT----------PPYLAPY  160 (324)
T ss_dssp             EEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------CSSCHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC----------CCcchhH
Confidence            99999952                    12344444443    3  67899999998765221          1123346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCC---cc--hHHHHHHHHHcCCCeeecCCC-c----ceEeeee
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---NP--VEEWFFHRLKAGRPIPIPGSG-I----QVTQLGH  191 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~---~~--~~~~~~~~~~~~~~~~~~~~~-~----~~~~~i~  191 (249)
                       .+|...|.+.+       ..++++++++||.+.++...   ..  .................+..- .    ...+..+
T Consensus       161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (324)
T 3u9l_A          161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDAD  240 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCC
Confidence             99998887653       35899999999999865321   00  000001111110000000000 0    0011257


Q ss_pred             HHHHHHHHHHHhcCCCC-CCceEEecCCcccc-------HHHHHHHHHHHhCCCc
Q 025702          192 VKDLARAFVQVLGNEKA-SRQVFNISGEKYVT-------FDGLARACAKVTGYCI  238 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~~~-~~~~~~i~~~~~~s-------~~~l~~~~~~~~g~~~  238 (249)
                      ++|+|++++.++..+.. ....+.+. +....       ..++.+.+.+.+|.+.
T Consensus       241 p~~vA~aiv~~~~~~~~~~~~~~~~g-p~~~~~~~~~~~~~~~~~~~~~~~g~~~  294 (324)
T 3u9l_A          241 VSLVADAIVRVVGTASGKRPFRVHVD-PAEDGADVGFSVLDRLRAEMLHRVGLSD  294 (324)
T ss_dssp             THHHHHHHHHHHTSCTTCCCSEEEEC-TTCCSHHHHHHHHHHHHHHHHHHTTCGG
T ss_pred             HHHHHHHHHHHhcCCCCCCCeEEEeC-CcchHHHHHHHHHHHHHHHHHHHcChHh
Confidence            89999999999988742 23355554 32223       3455566666777544

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.73  E-value=1.9e-17  Score=129.12  Aligned_cols=191  Identities=16%  Similarity=0.214  Sum_probs=129.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+......        ...+...++.++.+|++|.++++++++..     ++|+
T Consensus        33 TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           33 TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKE--------IAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654221        11122467899999999999988887642     7999


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+    ++.++..+.  +..++|++||...+..           ..+...|
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  173 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG-----------NPGQTNY  173 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC-----------CCCchhH
Confidence            999998632                    11    333444443  5679999999766421           1223346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+.++.... .............++         ..+.+++|+|+++++
T Consensus       174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~edvA~~v~~  243 (266)
T 3grp_A          174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIPM---------KRMGIGEEIAFATVY  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89987776652       357999999999998863111 111222233333222         245678999999999


Q ss_pred             HhcCCC--CCCceEEecCCcc
Q 025702          202 VLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++....  ..|+.+++.+|..
T Consensus       244 L~s~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          244 LASDEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTC-
T ss_pred             HhCccccCccCCEEEECCCee
Confidence            997643  3689999988753

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.73  E-value=1.9e-17  Score=127.77  Aligned_cols=193  Identities=16%  Similarity=0.216  Sum_probs=129.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEec-CCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++| ++..... .    ...+.....++.++.+|++|.++++++++..     ++|
T Consensus        10 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A           10 TGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANE-V----VDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-H----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH-H----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999 4332110 0    0111112356889999999999988887642     799


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||++|....                    +    ++.++..++  +..++|++||...+...           .+...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  153 (246)
T 2uvd_A           85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-----------PGQAN  153 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTBHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-----------CCCch
Confidence            99999986311                    1    233444443  56899999998764221           12334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..++++++++||.+.++.... .............+         ...+.+++|+|++++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~  223 (246)
T 2uvd_A          154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV-LDENIKAEMLKLIP---------AAQFGEAQDIANAVT  223 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-CCTTHHHHHHHTCT---------TCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence            6 88987776542       458999999999998874221 10111112222211         123778999999999


Q ss_pred             HHhcCCC--CCCceEEecCCc
Q 025702          201 QVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++..+.  ..|+.+++.+|.
T Consensus       224 ~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          224 FFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCchhcCCCCCEEEECcCc
Confidence            9997532  358899998875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.73  E-value=1.5e-17  Score=130.73  Aligned_cols=197  Identities=17%  Similarity=0.246  Sum_probs=122.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+........    ...+.....++.++.+|++|++++.++++..     ++|+
T Consensus        35 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           35 TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV----IAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHH----HHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999997543321110    0112222467899999999999888877643     7999


Q ss_pred             EEecCCCC--h--------------------hhhHHH----HHhCC--C---CCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           76 VYDINGRE--A--------------------DEVEPI----LDALP--N---LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        76 Vi~~~~~~--~--------------------~~~~~~----~~a~~--~---~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      +||+||..  .                    .+...+    +..+.  +   ..++|++||...+..           ..
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~  179 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT-----------SP  179 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------------
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC-----------CC
Confidence            99999861  0                    112222    33332  2   568999999776421           12


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      +...| .+|...+.+.+       ..+++++.++||.+.++.... ...........        .......+.+++|+|
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~--------~~~p~~r~~~pedvA  250 (280)
T 4da9_A          180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA-VSGKYDGLIES--------GLVPMRRWGEPEDIG  250 (280)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CCBCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh-cchhHHHHHhh--------cCCCcCCcCCHHHHH
Confidence            23346 99988887653       357899999999998874211 11111111111        011223567899999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCccc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      +++++++....  ..|+.+++.+|..+
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          251 NIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             HHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             HHHHHHhCccccCCCCCEEEECCCccc
Confidence            99999998654  36899999988653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.73  E-value=1.4e-17  Score=130.38  Aligned_cols=195  Identities=18%  Similarity=0.232  Sum_probs=130.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.......+    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           35 TGASKGIGAEIAKTLASMGLKVWINYRSNAEVADAL----KNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999754422111    1112222457899999999999888887642     7999


Q ss_pred             EEecCCCChh--------------------hh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||....                    +.    +.++..++  +..++|++||...+..           ..+...|
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  179 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG-----------NMGQTNY  179 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-----------CCCchHh
Confidence            9999986311                    12    22333333  5679999999776422           1233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+..+.... .........         ........+.+++|+|+++++
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~---------~~~~~~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-LKDELKADY---------VKNIPLNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------C---------GGGCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-hcHHHHHHH---------HhcCCcCCCcCHHHHHHHHHH
Confidence             99988887653       357899999999998874211 111110000         111122357789999999999


Q ss_pred             HhcCCC--CCCceEEecCCcc
Q 025702          202 VLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++..+.  ..|+.+++.+|..
T Consensus       250 l~s~~~~~itG~~i~vdGG~~  270 (271)
T 4iin_A          250 LLSDHSSYITGETLKVNGGLY  270 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTSC
T ss_pred             HhCCCcCCCcCCEEEeCCCee
Confidence            997643  3689999988753

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.73  E-value=1.7e-17  Score=128.88  Aligned_cols=196  Identities=17%  Similarity=0.230  Sum_probs=131.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|+++++.........    .........++.++.+|++|.++++++++..     ++|+
T Consensus        19 TGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (256)
T 3ezl_A           19 TGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKW----LEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV   94 (256)
T ss_dssp             TTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHH----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999985433311100    0112222457899999999999888887643     7999


Q ss_pred             EEecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+    ++.++..++  +..++|++||...+..           ..+...|
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  163 (256)
T 3ezl_A           95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----------QFGQTNY  163 (256)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS-----------CSCCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC-----------CCCCccc
Confidence            999998631                    12    222333333  5679999999776422           1233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+.++.... ..+..........++         ..+.+++|+|+++++
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~  233 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRLGSPDEIGSIVAW  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89988776652       357899999999998763211 112223333332221         235679999999999


Q ss_pred             HhcCC--CCCCceEEecCCccc
Q 025702          202 VLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++...  ...|+.+++.+|..+
T Consensus       234 l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          234 LASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTSCC
T ss_pred             HhCCcccCCcCcEEEECCCEeC
Confidence            98653  346889999988654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.73  E-value=3.6e-17  Score=127.28  Aligned_cols=203  Identities=16%  Similarity=0.139  Sum_probs=127.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCc-cccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP-IAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|++.. ....     ...+... ..++.++.+|++|.+++.++++..     ++
T Consensus        10 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   84 (260)
T 1x1t_A           10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKV-----RAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI   84 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHH-----HHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHH-----HHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999998654 2110     0111111 346888999999999988887642     79


Q ss_pred             cEEEecCCCCh--------------------hhhHHHHH----hCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~--------------------~~~~~~~~----a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |++||++|...                    .+...+++    .++  +..++|++||...+..           ..+..
T Consensus        85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  153 (260)
T 1x1t_A           85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-----------SANKS  153 (260)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC-----------CCCCc
Confidence            99999998531                    11222333    333  5689999999877522           12334


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHH--cCCCeeec-CCCcceEeeeeHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPIPIP-GSGIQVTQLGHVKDLA  196 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~~~D~a  196 (249)
                      .| .+|...+.+.+       ..+++++.++||.+.++..... .........  ........ ........+.+++|+|
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva  232 (260)
T 1x1t_A          154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh-hhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHH
Confidence            56 89988887653       2478999999999998852211 000000000  00000000 0000123578899999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++++++...  ...|+.+++.+|..
T Consensus       233 ~~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          233 GTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhcCCCCCEEEECCCcc
Confidence            9999999753  23688999988754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.73  E-value=7.9e-17  Score=125.40  Aligned_cols=199  Identities=13%  Similarity=0.082  Sum_probs=132.8

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+  |+||+++++.|+++|++|++++|++.. ....     ..+......+.++.+|++|.++++++++..     ++
T Consensus        14 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (261)
T 2wyu_A           14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL-RPEA-----EKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (261)
T ss_dssp             ESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGG-HHHH-----HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHH-----HHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6998  999999999999999999999998631 1000     111111134788999999999988887643     78


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |+|||+||....                        ++..+++++.    +..++|++||...+..           ..+
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  156 (261)
T 2wyu_A           88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----------VPK  156 (261)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC-----------CCC
Confidence            999999985321                        2334555533    2358999999776421           122


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.++||.++++..... ..........+..++         ..+.+++|+|
T Consensus       157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva  227 (261)
T 2wyu_A          157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVG  227 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            3346 89998887653       3489999999999999853211 122223333222222         1356799999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCccccHHH
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEKYVTFDG  225 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~~s~~~  225 (249)
                      +++++++....  ..|+.|++.+|..++..+
T Consensus       228 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          228 NLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             HHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            99999997532  358899999987665433

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.73  E-value=1.5e-17  Score=130.24  Aligned_cols=196  Identities=15%  Similarity=0.132  Sum_probs=132.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----CCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~~~d~V   76 (249)
                      |||+|+||++++++|+++|++|++++|..... .     ....+......+.++.+|++|.+++.++.+.    .++|++
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~-----~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l  110 (273)
T 3uf0_A           37 TGAGSGIGRAIAHGYARAGAHVLAWGRTDGVK-E-----VADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL  110 (273)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTHHH-H-----HHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHH-H-----HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence            79999999999999999999999999763221 0     0011222245789999999999888777542    279999


Q ss_pred             EecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           77 YDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        77 i~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      ||+||...                    .+...++++    +.  +..++|++||...+..           ..+...| 
T Consensus       111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~~~~~~Y~  179 (273)
T 3uf0_A          111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG-----------GRNVAAYA  179 (273)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CSSCHHHH
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC-----------CCCChhHH
Confidence            99998631                    123333343    23  5679999999877522           1233456 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      .+|...+.+.+       ..+++++.++||.+.++...... ............+.         ..+.+++|+|+++++
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~  250 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA---------GRWATPEDMVGPAVF  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT---------SSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHH
Confidence            99988887653       36899999999999987421100 11122222222221         235679999999999


Q ss_pred             HhcCC--CCCCceEEecCCcccc
Q 025702          202 VLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      ++...  ...|+.+++.+|..+|
T Consensus       251 L~s~~a~~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          251 LASDAASYVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCchhcCCcCCEEEECcCccCC
Confidence            99763  3468999999987653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.73  E-value=3.7e-17  Score=127.69  Aligned_cols=193  Identities=16%  Similarity=0.144  Sum_probs=131.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|+++.+.........    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        32 TGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           32 TGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQET----LNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            799999999999999999999988775543311100    0112222467899999999999988887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC------C-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDAL------P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~------~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+||...                    .+..++++++      + +..++|++||...+..           ..+...
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  176 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG-----------NRGQVN  176 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC-----------CTTCHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC-----------CCCCch
Confidence            999998631                    1233344442      2 5679999999776422           123344


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.       ...+++++.++||.+.++.....  ...........++         ..+.+++|+|+++.
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~---------~~~~~~edva~~~~  245 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPM---------KRMGQAEEVAGLAS  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTT---------CSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            6 8998766654       23589999999999998863322  2233333333322         23567999999999


Q ss_pred             HHhcCC--CCCCceEEecCCc
Q 025702          201 QVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++...  ...|+.+++.+|.
T Consensus       246 ~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          246 YLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCCcccCccCCEEEeCCCc
Confidence            999763  3468899998863

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.73  E-value=2e-17  Score=128.78  Aligned_cols=198  Identities=17%  Similarity=0.100  Sum_probs=124.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+......        ...+....+.++.+|++|.++++++++..     ++|+
T Consensus        15 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A           15 TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAER--------VAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH--------HHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998755221        11122467899999999999988888643     7999


Q ss_pred             EEecCCCCh---------------------hhhHHHHHh----CC--C----CCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA---------------------DEVEPILDA----LP--N----LEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a----~~--~----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      +||+++...                     .+...++++    +.  +    ..++|++||...+.           +..
T Consensus        87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~  155 (261)
T 3n74_A           87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR-----------PRP  155 (261)
T ss_dssp             EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS-----------CCT
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC-----------CCC
Confidence            999998632                     012222332    22  1    44699999977642           122


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ....| .+|...+.+.+       ..+++++.++|+.+.++...... .......     ............+++++|+|
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~dva  229 (261)
T 3n74_A          156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM-GEDSEEI-----RKKFRDSIPMGRLLKPDDLA  229 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc-ccCcHHH-----HHHHhhcCCcCCCcCHHHHH
Confidence            23346 89988887653       35789999999999887421110 0000000     00011111223578899999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCccccH
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYVTF  223 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s~  223 (249)
                      +++++++...  ...|+.+++.+|..++.
T Consensus       230 ~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          230 EAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             HHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            9999999653  24689999999887654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.73  E-value=5e-17  Score=125.28  Aligned_cols=185  Identities=12%  Similarity=0.131  Sum_probs=130.2

Q ss_pred             CCCcccchHHHHHHHHH-cCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC---CCcEE
Q 025702            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---GFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~---~~d~V   76 (249)
                      |||+|+||+++++.|++ .|+.|++++|+....               ...+.++.+|++|.+++.++++..   ++|++
T Consensus        10 TGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A           10 TGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             ETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred             eCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999 789999999886521               246789999999999988887533   79999


Q ss_pred             EecCCCCh--------------------hhhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           77 YDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        77 i~~~~~~~--------------------~~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      ||+||...                    .+...+++++.    +..++|++||...+..           ..+...| .+
T Consensus        75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y~as  143 (244)
T 4e4y_A           75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA-----------KPNSFAYTLS  143 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC-----------CTTBHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC-----------CCCCchhHHH
Confidence            99998631                    12444555543    2358999999877522           1223346 99


Q ss_pred             hHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHH-----------HHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEW-----------FFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       132 k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      |...+.+.+       ..+++++.++||.+.++... .....           .........         ....+.+++
T Consensus       144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~  213 (244)
T 4e4y_A          144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR-NLIQKYANNVGISFDEAQKQEEKEF---------PLNRIAQPQ  213 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH-HHHHHHHHHHTCCHHHHHHHHHTTS---------TTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH-HHHHhhhhhcCCCHHHHHHHHhhcC---------CCCCCcCHH
Confidence            988887653       46899999999999887311 11111           111111211         123467899


Q ss_pred             HHHHHHHHHhcCCC--CCCceEEecCCccc
Q 025702          194 DLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      |+|+++++++..+.  ..|+.+++.+|..+
T Consensus       214 dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          214 EIAELVIFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhcCccccccCCeEeECCCccC
Confidence            99999999997643  36889999887643

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.73  E-value=8.2e-17  Score=125.93  Aligned_cols=196  Identities=16%  Similarity=0.134  Sum_probs=130.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++++.......+    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        24 TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           24 TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKV----VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999887654421111    1122223467899999999999998888643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||+||...                    .+...++++    +++..++|++||....          ..+..+...| .
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~~Y~a  169 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK----------DFSVPKHSLYSG  169 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT----------TCCCTTCHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc----------cCCCCCCchhHH
Confidence            999998631                    122333333    3345699999986531          1122234456 9


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCC-----------cchHHHHHHHHHcCCCeeecCCCcceEeeeeH
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (249)
                      +|...+.+.+       ..+++++.++||.+.++...           ...............++         ..+.++
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p  240 (270)
T 3is3_A          170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL---------HRNGWP  240 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT---------CSCBCH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC---------CCCCCH
Confidence            9988887653       35899999999999987421           00011111222222211         235679


Q ss_pred             HHHHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          193 KDLARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       193 ~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +|+|+++++++...  ...|+.+++.+|.
T Consensus       241 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          241 QDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            99999999999754  2368899998874

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.73  E-value=3.8e-17  Score=126.15  Aligned_cols=184  Identities=18%  Similarity=0.264  Sum_probs=123.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++...                ..+..+.+|++|.+++.++++..     ++|+
T Consensus        21 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           21 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----------------HHhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542                11223789999999888887642     6899


Q ss_pred             EEecCCCChh--------------------hhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|....                    +...++++    ++  +..++|++||...+..           ..+...|
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  153 (247)
T 1uzm_A           85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-----------IGNQANY  153 (247)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC-----------CCCChhH
Confidence            9999986321                    12233333    32  5679999999765321           1123346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..++++++++||.+.++... ..............+         ...+.+++|+|+++++
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~  223 (247)
T 1uzm_A          154 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-ALDERIQQGALQFIP---------AKRVGTPAEVAGVVSF  223 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-HSCHHHHHHHGGGCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh-hcCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence             88988776653       35899999999999776310 000111111111111         1246789999999999


Q ss_pred             HhcCC--CCCCceEEecCCccc
Q 025702          202 VLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++..+  ...|+.+++.+|..+
T Consensus       224 l~s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          224 LASEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTC
T ss_pred             HcCccccCCcCCEEEECCCccc
Confidence            99753  236889999887643

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.73  E-value=4.3e-17  Score=127.29  Aligned_cols=194  Identities=19%  Similarity=0.209  Sum_probs=130.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhh-hhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++|+.......     ...+ ......+.++.+|++|.+++.++++..     ++|
T Consensus        27 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  101 (267)
T 1vl8_A           27 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEA-----AQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD  101 (267)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999986542110     0111 111356888999999999888887642     799


Q ss_pred             EEEecCCCCh--------------------hhhHHH----HHhCC--CCCeEEEeecccc-ccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~----~~a~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~  127 (249)
                      +|||++|...                    .+...+    +..++  +..++|++||..+ +           .+..+..
T Consensus       102 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~~~~  170 (267)
T 1vl8_A          102 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-----------VTMPNIS  170 (267)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------CCSSSCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc-----------cCCCCCh
Confidence            9999998631                    112223    33333  5679999999763 1           1112334


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH--HHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      .| .+|...+.+.+       ..++++++++||.+.++... ...  ...........+.         ..+.+++|+|+
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~p~---------~~~~~p~dvA~  240 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE-AVFSDPEKLDYMLKRIPL---------GRTGVPEDLKG  240 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH-HHHTCHHHHHHHHHTCTT---------SSCBCGGGGHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc-ccccChHHHHHHHhhCCC---------CCCcCHHHHHH
Confidence            46 89998887653       35899999999999887421 111  1122222222211         13678999999


Q ss_pred             HHHHHhcCC--CCCCceEEecCCcc
Q 025702          198 AFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++++++...  ...|+.+.+.+|..
T Consensus       241 ~v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          241 VAVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHcCccccCCcCCeEEECCCCC
Confidence            999999763  23688999988754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.73  E-value=1.9e-17  Score=130.09  Aligned_cols=195  Identities=16%  Similarity=0.185  Sum_probs=132.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+.......     ...+......+.++.+|++|.+++.++++..     ++|+
T Consensus        30 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  104 (279)
T 3sju_A           30 TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAA-----VDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI  104 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            79999999999999999999999999986542211     0112222467899999999999888887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh------CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA--------------------DEVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||+||...                    .++..++++      +.  +..++|++||...+..           ..+..
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~  173 (279)
T 3sju_A          105 LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG-----------VMYAA  173 (279)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC-----------CCCCh
Confidence            999998631                    122223332      22  5579999999876421           12233


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc----------hHHHHHHHHHcCCCeeecCCCcceEee
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP----------VEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      .| .+|...+.+.+       ..+++++.++||.+.++.....          .............+         ...+
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~  244 (279)
T 3sju_A          174 PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP---------LGRY  244 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT---------TSSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC---------CCCC
Confidence            46 99988777653       3579999999999987631000          01122222222222         2246


Q ss_pred             eeHHHHHHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          190 GHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      .+++|+|+++++++....  ..|+.+++.+|..
T Consensus       245 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          245 STPEEVAGLVGYLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             BCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred             CCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            779999999999997643  4688999988753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.73  E-value=4.8e-17  Score=125.69  Aligned_cols=191  Identities=16%  Similarity=0.184  Sum_probs=132.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+......        ........+..+.+|++|+++++++++..     ++|+
T Consensus        15 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A           15 TGASRGIGKAIAELLAERGAKVIGTATSESGAQA--------ISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211        11112346788999999999988888643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+...++++    +.  +..++|++||...+..           ..+...|
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  155 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG-----------NAGQANY  155 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-----------CCCChHH
Confidence            999998631                    122233333    32  5679999999776422           1233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+..+..... ............+.         ..+.+++|+|+++++
T Consensus       156 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~p~---------~r~~~p~dva~~v~~  225 (248)
T 3op4_A          156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL-NDEQRTATLAQVPA---------GRLGDPREIASAVAF  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS-CHHHHHHHHHTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc-CHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             89987776653       3589999999999988753221 11222222222221         246789999999999


Q ss_pred             HhcCCC--CCCceEEecCCcc
Q 025702          202 VLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++....  ..|+.+++.+|..
T Consensus       226 L~s~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          226 LASPEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             HHSGGGTTCCSCEEEESTTSS
T ss_pred             HcCCccCCccCcEEEECCCee
Confidence            997543  3689999988753

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.73  E-value=1.2e-17  Score=130.58  Aligned_cols=198  Identities=13%  Similarity=0.148  Sum_probs=131.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++|+........    .........++.++.+|++|.++++++++..     ++|+
T Consensus        31 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           31 TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTW----LMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHH----HHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999986544321110    0111122467899999999999888887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+...++++    +.  +..++|++||...+..           ..+...|
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  175 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG-----------AFGQANY  175 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTBHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC-----------CCCcchH
Confidence            999998631                    122233333    32  5679999999776422           1223446


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+.++..... ...    ......    ........+.+++|+|+++++
T Consensus       176 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~----~~~~~~----~~~~~~~~~~~p~dvA~~v~~  246 (269)
T 3gk3_A          176 ASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV-PQD----VLEAKI----LPQIPVGRLGRPDEVAALIAF  246 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCS----GGGCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh-chh----HHHHHh----hhcCCcCCccCHHHHHHHHHH
Confidence             89987776652       3579999999999988753211 111    001010    011112346789999999999


Q ss_pred             HhcCCC--CCCceEEecCCcccc
Q 025702          202 VLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      ++..+.  ..|+.+++.+|..++
T Consensus       247 L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          247 LCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HhCCCcCCeeCcEEEECCCEeCc
Confidence            997653  368999999987654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.72  E-value=1.2e-17  Score=132.66  Aligned_cols=186  Identities=15%  Similarity=0.099  Sum_probs=120.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        37 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  111 (301)
T 3tjr_A           37 TGGASGIGLATATEFARRGARLVLSDVDQPALEQA-----VNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV  111 (301)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            79999999999999999999999999987553211     0112222457899999999999988887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||+||...                    .+...++++    +.  + ..++|++||...+..           ..+...
T Consensus       112 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  180 (301)
T 3tjr_A          112 VFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-----------NAGLGT  180 (301)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------CCCchH
Confidence            999998631                    123334443    22  3 569999999876521           123344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHH-----HHcCCCeeecCCCcceEeeeeHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHR-----LKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      | .+|...+.+.+       ..+++++.++||.+..+.     .......     .....+....+.......+++++|+
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  255 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL-----VSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDV  255 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH-----HHHHHHHC----------------------CCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc-----ccccccccchhhccccChhhhccccccccCCCCHHHH
Confidence            6 89988776642       357999999999998773     1111000     0001111111222234568999999


Q ss_pred             HHHHHHHhcCCC
Q 025702          196 ARAFVQVLGNEK  207 (249)
Q Consensus       196 a~~~~~~~~~~~  207 (249)
                      |++++.+++.+.
T Consensus       256 A~~i~~~l~~~~  267 (301)
T 3tjr_A          256 ARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCC
Confidence            999999998764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.72  E-value=1.8e-17  Score=127.78  Aligned_cols=186  Identities=14%  Similarity=0.114  Sum_probs=128.2

Q ss_pred             CCCcccchHHHHHHHHHcCC-------eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh---
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~---   70 (249)
                      |||+|+||++++++|+++|+       +|++++|++......     ...+.....++.++.+|++|.+++.++++.   
T Consensus         8 TGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            8 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKI-----SLECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHH-----HHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHH-----HHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            79999999999999999999       999999976442110     011111135688999999999988888763   


Q ss_pred             --CCCcEEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCC
Q 025702           71 --KGFDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (249)
Q Consensus        71 --~~~d~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (249)
                        .++|+|||++|...                    .++..++++    ++  +..++|++||...+..           
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  151 (244)
T 2bd0_A           83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA-----------  151 (244)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------
T ss_pred             hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC-----------
Confidence              26999999998521                    123334444    22  5689999999887532           


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      ..+...| .+|...+.+.+       ..+++++++|||+++++......          .       ..  ...+++++|
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------~-------~~--~~~~~~~~d  212 (244)
T 2bd0_A          152 FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD----------D-------EM--QALMMMPED  212 (244)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC----------S-------TT--GGGSBCHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc----------c-------cc--cccCCCHHH
Confidence            1233456 89998887652       35789999999999998531100          0       00  125789999


Q ss_pred             HHHHHHHHhcCCCC--CCceEEecCCccc
Q 025702          195 LARAFVQVLGNEKA--SRQVFNISGEKYV  221 (249)
Q Consensus       195 ~a~~~~~~~~~~~~--~~~~~~i~~~~~~  221 (249)
                      +|++++.++..+..  .++.+...+++.+
T Consensus       213 va~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          213 IAAPVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHHHHHHHhCCccccchheEEecccccc
Confidence            99999999987543  3455555554433

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.72  E-value=1.8e-17  Score=128.65  Aligned_cols=194  Identities=17%  Similarity=0.211  Sum_probs=129.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAV-----ASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986542110     0111111346889999999999888887642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||++|....                    +    ++.++..+.  + ..++|++||...+..           ..+...
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  151 (256)
T 1geg_A           83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-----------NPELAV  151 (256)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTBHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-----------CCCchh
Confidence            9999985211                    1    122333333  3 579999999765421           112334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH-----------HHHHHHHcCCCeeecCCCcceEee
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-----------WFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      | .+|...+.+.+       ..+++++.++||.+.++... ....           .......+..         ....+
T Consensus       152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~  221 (256)
T 1geg_A          152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA-EIDRQVSEAAGKPLGYGTAEFAKRI---------TLGRL  221 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH-HHHHHHHHHHTCCTTHHHHHHHTTC---------TTCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh-hhhhhccccccCChHHHHHHHHhcC---------CCCCC
Confidence            6 89988877653       35899999999999887310 0000           0001111111         11247


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      .+++|+|+++++++..+  ...|+.+.+.+|..
T Consensus       222 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          222 SEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            88999999999999764  23688999988754

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.72  E-value=2.6e-17  Score=127.91  Aligned_cols=191  Identities=16%  Similarity=0.185  Sum_probs=129.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC----CCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----~~d~V   76 (249)
                      |||+|.||++++++|+++|++|++++|+......           .....+.++.+|++|.+++.++++..    ++|++
T Consensus        15 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A           15 TGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA-----------DLGDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH-----------HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH-----------hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            7999999999999999999999999996443221           12467899999999999888877633    89999


Q ss_pred             EecCCCCh------------------------hhhHHHHHh----CC----------CCCeEEEeeccccccCCCCCCCC
Q 025702           77 YDINGREA------------------------DEVEPILDA----LP----------NLEQFIYCSSAGVYLKSDLLPHC  118 (249)
Q Consensus        77 i~~~~~~~------------------------~~~~~~~~a----~~----------~~~~~i~~Ss~~v~~~~~~~~~~  118 (249)
                      ||+||...                        .+...++++    +.          +..++|++||...+..       
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  156 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG-------  156 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC-------
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC-------
Confidence            99998521                        112222222    21          2348999999776421       


Q ss_pred             CCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeee
Q 025702          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                          ..+...| .+|...+.+.+       ..+++++.++||.+..+.... .............+.        ...+.
T Consensus       157 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--------~~r~~  223 (257)
T 3tl3_A          157 ----QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPH--------PSRLG  223 (257)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSS--------SCSCB
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCC--------CCCcc
Confidence                1122346 89988776652       357999999999998875322 112222222232221        02467


Q ss_pred             eHHHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      +++|+|++++++++++...|+.+++.+|..++
T Consensus       224 ~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          224 NPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             CHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             CHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            79999999999999876689999999987654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.72  E-value=1.3e-16  Score=124.46  Aligned_cols=196  Identities=14%  Similarity=0.116  Sum_probs=131.3

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+  |+||+++++.|+++|++|++++|++ ......     ..+........++.+|++|.+++.++++..     ++
T Consensus        15 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T 1qsg_A           15 TGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRV-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   88 (265)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHH-----HHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  9999999999999999999999986 211100     111111124578899999999888887642     68


Q ss_pred             cEEEecCCCChh-------------------------hhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        74 d~Vi~~~~~~~~-------------------------~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      |+|||+|+....                         ++..+++++.    +..++|++||...+..           ..
T Consensus        89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  157 (265)
T 1qsg_A           89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----------IP  157 (265)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC-----------CC
Confidence            999999985321                         1223444432    2358999999776422           12


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      +...| .+|...+.+.+       ..+++++.++||+++++.... .....+........++         ..+.+++|+
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  228 (265)
T 1qsg_A          158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDV  228 (265)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            33456 89998887653       247999999999999985321 1122233333222221         135679999


Q ss_pred             HHHHHHHhcCCC--CCCceEEecCCcccc
Q 025702          196 ARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      |+++++++....  ..|+.|++.+|..++
T Consensus       229 a~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          229 GNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            999999987532  258899999987554

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.72  E-value=7e-17  Score=126.36  Aligned_cols=202  Identities=14%  Similarity=0.115  Sum_probs=134.9

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+  |+||++++++|+++|++|++++|+..... .+     ..+......+.++.+|++|.++++++++..     ++
T Consensus        20 TGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   93 (271)
T 3ek2_A           20 TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RI-----TEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL   93 (271)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred             eCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HH-----HHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7988  99999999999999999999999843211 00     111111245889999999999998888643     78


Q ss_pred             cEEEecCCCChh-------------------------hhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD-------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        74 d~Vi~~~~~~~~-------------------------~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      |++||+||....                         +...+++++.    +..++|++||...+..           ..
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  162 (271)
T 3ek2_A           94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA-----------IP  162 (271)
T ss_dssp             EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC-----------CC
Confidence            999999985321                         1233444432    3458999999876422           22


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      +...| .+|...+.+.+       ..+++++.++||.+..+..... .............++         ..+..++|+
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedv  233 (271)
T 3ek2_A          163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQV  233 (271)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHH
Confidence            34456 89988887653       3589999999999998753222 122333333333322         134668999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCccccHHHHHH
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEKYVTFDGLAR  228 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~s~~~l~~  228 (249)
                      |+++++++...  ...|+.+++.+|..++..++.+
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            99999999763  3468999999998887766543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.72  E-value=6e-18  Score=135.69  Aligned_cols=214  Identities=14%  Similarity=0.093  Sum_probs=141.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCC--CC---CchhhhhccCceEEEEeccCCHHHHHHhhhhC----
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP--GE---SDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~---~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----   71 (249)
                      |||+|.||+++++.|+++|++|++++|+.........  ..   ....+......+.++.+|++|.+++.++++..    
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  112 (322)
T 3qlj_A           33 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETF  112 (322)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            7999999999999999999999999987311100000  00   01122223457889999999999988887643    


Q ss_pred             -CCcEEEecCCCCh--------------------hhhHHHHHhC----C--------CCCeEEEeeccccccCCCCCCCC
Q 025702           72 -GFDVVYDINGREA--------------------DEVEPILDAL----P--------NLEQFIYCSSAGVYLKSDLLPHC  118 (249)
Q Consensus        72 -~~d~Vi~~~~~~~--------------------~~~~~~~~a~----~--------~~~~~i~~Ss~~v~~~~~~~~~~  118 (249)
                       ++|++||+||...                    .+...+++++    .        ...++|++||...+..       
T Consensus       113 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-------  185 (322)
T 3qlj_A          113 GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG-------  185 (322)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC-------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC-------
Confidence             7999999998631                    1122233332    1        0259999999776522       


Q ss_pred             CCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeee
Q 025702          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                          ......| .+|...+.+.+       ..+++++.++|| +..+....... ...            ......+.++
T Consensus       186 ----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~-~~~------------~~~~~~~~~~  247 (322)
T 3qlj_A          186 ----SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA-EMM------------ATQDQDFDAM  247 (322)
T ss_dssp             ----BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCC-C--------------------CCTT
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhh-hhh------------hccccccCCC
Confidence                1123346 99988887653       368999999999 65553211100 000            0111123456


Q ss_pred             eHHHHHHHHHHHhcCCC--CCCceEEecCCccc-----------------cHHHHHHHHHHHhCCCcc
Q 025702          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEKYV-----------------TFDGLARACAKVTGYCIA  239 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~-----------------s~~~l~~~~~~~~g~~~~  239 (249)
                      .++|+|+++++++....  ..|+.+++.+|...                 +..|+++.+.+.+|.+.+
T Consensus       248 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~  315 (322)
T 3qlj_A          248 APENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP  315 (322)
T ss_dssp             CGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence            79999999999987543  36899999998865                 669999999999985433

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.72  E-value=2.5e-17  Score=128.59  Aligned_cols=196  Identities=15%  Similarity=0.167  Sum_probs=132.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|.||+++++.|+++|++|++++|+........     ..+.. ...++.++.+|++|.++++++++..     ++|
T Consensus        26 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  100 (266)
T 4egf_A           26 TGATKGIGADIARAFAAAGARLVLSGRDVSELDAAR-----RALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD  100 (266)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865522110     11111 2467899999999998888777643     799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      ++||+||...                    .+...++++    +.  + ..++|++||...+..           ..+..
T Consensus       101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  169 (266)
T 4egf_A          101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP-----------LPDHY  169 (266)
T ss_dssp             EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC-----------CCCCh
Confidence            9999998631                    122223333    22  2 469999999877521           22334


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      .| .+|...+.+.+       ..+++++.++||.+.++...... ............++         ..+.+++|+|++
T Consensus       170 ~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~~  240 (266)
T 4egf_A          170 AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL---------GRFAVPHEVSDA  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            46 99988877652       35899999999999887310000 01112222222221         235679999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCccc
Q 025702          199 FVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      +++++...  ...|+.+++.+|..+
T Consensus       241 v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          241 VVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCccCcEEEECCCccC
Confidence            99999763  346899999998754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.72  E-value=4.8e-16  Score=122.02  Aligned_cols=208  Identities=12%  Similarity=0.076  Sum_probs=133.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCC-CCCc-------hhhhhccCceEEEEeccCCHHHHHHhhhh--
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~-------~~~~~~~~~v~~~~~d~~d~~~l~~~~~~--   70 (249)
                      |||+|.||+++++.|+++|++|++++|+......... ....       ..+......+.++.+|++|.+++.++++.  
T Consensus        17 TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   96 (277)
T 3tsc_A           17 TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGV   96 (277)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            7999999999999999999999999986432111000 0000       11222346789999999999999888864  


Q ss_pred             ---CCCcEEEecCCCChh--------------------hhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCC
Q 025702           71 ---KGFDVVYDINGREAD--------------------EVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCET  120 (249)
Q Consensus        71 ---~~~d~Vi~~~~~~~~--------------------~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~  120 (249)
                         .++|++||+||....                    +...++++    +.  + ..++|++||...+..         
T Consensus        97 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  167 (277)
T 3tsc_A           97 AALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM---------  167 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC---------
Confidence               269999999986311                    22223333    32  2 468999999876522         


Q ss_pred             CCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCe-eecCCCcceEeeee
Q 025702          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPI-PIPGSGIQVTQLGH  191 (249)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~  191 (249)
                        ......| .+|...+.+.+       ..+++++.++||.+.++.................... ........ ..+.+
T Consensus       168 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~  244 (277)
T 3tsc_A          168 --QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP-DWVAE  244 (277)
T ss_dssp             --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS-CSCBC
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC-CCCCC
Confidence              1223346 99988887653       3579999999999988753222222222221111111 01111111 24788


Q ss_pred             HHHHHHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++|+|++++++++...  ..|+.+++.+|..
T Consensus       245 pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          245 PEDIADTVCWLASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence            9999999999997643  3688999988763

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.72  E-value=1.2e-16  Score=125.49  Aligned_cols=193  Identities=14%  Similarity=0.134  Sum_probs=129.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEec-CCCccccCCCCCCchhhhhc-cCceEEEEeccCCH----HHHHHhhhhC---
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDY----DFVKSSLSAK---   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~----~~l~~~~~~~---   71 (249)
                      |||+|+||+++++.|+++|++|++++| ++..... +    ...+... ...+.++.+|++|.    +++.++++..   
T Consensus        17 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   91 (276)
T 1mxh_A           17 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQR-L----VAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   91 (276)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-H----HHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHH-H----HHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence            799999999999999999999999999 5433111 0    0111111 35688999999999    8888877642   


Q ss_pred             --CCcEEEecCCCCh--------------------hh-----------hHHHHHh----CC-CC------CeEEEeeccc
Q 025702           72 --GFDVVYDINGREA--------------------DE-----------VEPILDA----LP-NL------EQFIYCSSAG  107 (249)
Q Consensus        72 --~~d~Vi~~~~~~~--------------------~~-----------~~~~~~a----~~-~~------~~~i~~Ss~~  107 (249)
                        ++|+|||+||...                    ..           ...++++    +. +.      .++|++||..
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  171 (276)
T 1mxh_A           92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  171 (276)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence              7999999998521                    11           1123333    32 33      7999999988


Q ss_pred             cccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeee
Q 025702          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (249)
Q Consensus       108 v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (249)
                      .+..           ..+...| .+|...+.+.+       ..+++++.++||.++++ .  ..............++  
T Consensus       172 ~~~~-----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~~~~~~~~~~~~p~--  235 (276)
T 1mxh_A          172 TDLP-----------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMPQETQEEYRRKVPL--  235 (276)
T ss_dssp             GGSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSCHHHHHHHHTTCTT--
T ss_pred             hcCC-----------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCCHHHHHHHHhcCCC--
Confidence            7532           1233456 89988887653       34899999999999998 2  1112222333322211  


Q ss_pred             cCCCcceEeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          180 PGSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       180 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                            .+++.+++|+|+++++++..+.  ..|+.+++.+|..
T Consensus       236 ------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          236 ------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             ------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence                  1127789999999999997532  2588999988754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.72  E-value=4.8e-17  Score=127.56  Aligned_cols=195  Identities=17%  Similarity=0.168  Sum_probs=132.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+.......     ...+.....++.++.+|++|.++++++++..     ++|+
T Consensus        38 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           38 TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVV-----ADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542111     1122223457899999999999998888743     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+||...                    .+...++++    +.  + ..++|++||...+...         ...+...
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~~~~~~  183 (276)
T 3r1i_A          113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IPQQVSH  183 (276)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CSSCCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CCCCcch
Confidence            999998631                    122223333    22  2 3689999997764211         1123344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++.++||.+..+.....  ...........++         ..+..++|+|++++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~p~---------~r~~~pedvA~~v~  252 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL--ADYHALWEPKIPL---------GRMGRPEELTGLYL  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG--GGGHHHHGGGSTT---------SSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc--hHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            6 99988887653       3589999999999998853211  1112222222221         23567899999999


Q ss_pred             HHhcCC--CCCCceEEecCCcc
Q 025702          201 QVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++...  ...|+.+++.+|..
T Consensus       253 fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHcCccccCccCcEEEECcCcc
Confidence            999753  23688999988754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.72  E-value=2.9e-17  Score=127.69  Aligned_cols=195  Identities=16%  Similarity=0.137  Sum_probs=129.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCc--cccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|++..  ....     ...+.....++.++.+|++|.++++++++..     ++
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (258)
T 3a28_C            8 TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAET-----IKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF   82 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998654  1110     0111112357889999999999888877632     79


Q ss_pred             cEEEecCCCChh--------------------hhHHH----HHhCC--CC-CeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD--------------------EVEPI----LDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        74 d~Vi~~~~~~~~--------------------~~~~~----~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      |++||++|....                    +...+    +..++  +. .++|++||...+..           ..+.
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  151 (258)
T 3a28_C           83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-----------FPIL  151 (258)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-----------CTTC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-----------CCCc
Confidence            999999985311                    12223    33332  45 79999999876421           1223


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH-----------HHHHHHHcCCCeeecCCCcceE
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-----------WFFHRLKAGRPIPIPGSGIQVT  187 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  187 (249)
                      ..| .+|...+.+.+       ..++++++++||.+.++... ....           ..........         ...
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~  221 (258)
T 3a28_C          152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWE-QIDAELSKINGKPIGENFKEYSSSI---------ALG  221 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHH-HHHHHHHHHHCCCTTHHHHHHHTTC---------TTS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhh-hhhhhhccccCCchHHHHHHHHhcC---------CCC
Confidence            346 89988887653       35899999999999776310 0000           0011111111         112


Q ss_pred             eeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          188 QLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      .+.+++|+|+++++++..+  ...|+.+++.+|..+
T Consensus       222 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          222 RPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             CccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence            3678999999999999764  236889999887644

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.72  E-value=1.2e-16  Score=124.94  Aligned_cols=194  Identities=18%  Similarity=0.182  Sum_probs=130.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++++.......+    ...+......+.++.+|++|.++++++++..     ++|+
T Consensus        37 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           37 TGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV----VSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999999987654321111    1122223467889999999999888887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||+||...                    .+...++++    +++..++|++||.....          .+..+...| .
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~~~~Y~a  182 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPGISLYSA  182 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTTCHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCCchHHHH
Confidence            999998631                    122233333    44567999999865421          112234456 9


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|...+.+.+       ..+++++.++||.+.++......  .......+..+.         ..+..++|+|+++++++
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~---------~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIAT---------GSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTT---------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCC---------CCCCCHHHHHHHHHHHh
Confidence            9988887653       35899999999999988532110  011122222221         13567899999999998


Q ss_pred             cCC--CCCCceEEecCCc
Q 025702          204 GNE--KASRQVFNISGEK  219 (249)
Q Consensus       204 ~~~--~~~~~~~~i~~~~  219 (249)
                      ...  ...|+.+++.+|.
T Consensus       252 s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CcccCCccCCEEEeCcCc
Confidence            653  3468899998875

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.71  E-value=8.7e-17  Score=124.46  Aligned_cols=175  Identities=10%  Similarity=0.086  Sum_probs=125.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+..+.                 .-..+.+|++|.+++.++++..     ++|+
T Consensus        28 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-----------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           28 LGGSGALGAEVVKFFKSKSWNTISIDFRENPN-----------------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------SSEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------cccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999987652                 1234678999999888887643     6899


Q ss_pred             EEecCCCC---------------------hhhhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGRE---------------------ADEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~---------------------~~~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      |||+||..                     ..+...+++++    ++..++|++||...+.           +..+...| 
T Consensus        91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y~  159 (251)
T 3orf_A           91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-----------RTSGMIAYG  159 (251)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CCTTBHHHH
T ss_pred             EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-----------CCCCCchhH
Confidence            99999852                     11233344443    2335899999987752           12233446 


Q ss_pred             cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 ~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .+|...+.+.+         ..+++++.++||.+.++.         .......         .....+++++|+|++++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~---------~~~~~~~---------~~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT---------NRKYMSD---------ANFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             HHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH---------HHHHCTT---------SCGGGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc---------hhhhccc---------ccccccCCHHHHHHHHH
Confidence            99998887753         357899999999987762         1111111         12235678999999999


Q ss_pred             HHhcC---CCCCCceEEecCCccc
Q 025702          201 QVLGN---EKASRQVFNISGEKYV  221 (249)
Q Consensus       201 ~~~~~---~~~~~~~~~i~~~~~~  221 (249)
                      .++..   ....|+.+++.+++..
T Consensus       222 ~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHhcCccccCCcceEEEEecCCcc
Confidence            99988   4447889998877653

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.71  E-value=4e-17  Score=128.37  Aligned_cols=197  Identities=15%  Similarity=0.119  Sum_probs=130.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccC---ceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSS---KILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|+||++++++|+++|++|++++|++.......     ..+.....   ++.++.+|++|.++++++++..     +
T Consensus        12 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (280)
T 1xkq_A           12 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   86 (280)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999999865421100     01111112   6889999999999888887642     7


Q ss_pred             CcEEEecCCCChh------------------------hhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (249)
Q Consensus        73 ~d~Vi~~~~~~~~------------------------~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (249)
                      +|+|||+||....                        +...++++    +. ...++|++||...+...          .
T Consensus        87 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~  156 (280)
T 1xkq_A           87 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA----------Q  156 (280)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC----------C
T ss_pred             CCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC----------C
Confidence            9999999985310                        12223333    22 12799999998775321          0


Q ss_pred             CCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc--hH------HHHHHHHHcCCCeeecCCCcceE
Q 025702          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP--VE------EWFFHRLKAGRPIPIPGSGIQVT  187 (249)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~  187 (249)
                      .+...| .+|...+.+.+       ..+++++.++||++.++.....  ..      ..+.......  .       ...
T Consensus       157 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~  227 (280)
T 1xkq_A          157 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC--I-------PIG  227 (280)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--C-------TTS
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC--C-------CCC
Confidence            223346 89988887653       3589999999999998841110  00      0011111111  1       112


Q ss_pred             eeeeHHHHHHHHHHHhcCC---CCCCceEEecCCccc
Q 025702          188 QLGHVKDLARAFVQVLGNE---KASRQVFNISGEKYV  221 (249)
Q Consensus       188 ~~i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~  221 (249)
                      .+.+++|+|+++++++..+   ...|+.+++.+|..+
T Consensus       228 ~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          228 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            4788999999999998754   346889999988654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.71  E-value=7e-17  Score=125.03  Aligned_cols=184  Identities=15%  Similarity=0.213  Sum_probs=124.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++...                ..+.++.+|++|+++++++++..     ++|+
T Consensus        27 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           27 TGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976541                24788999999999988887632     5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHH----hCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~----a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|...                    .+...+++    .++  +..++|++||...+..           ..+...|
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  159 (253)
T 2nm0_A           91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG-----------SAGQANY  159 (253)
T ss_dssp             EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC-----------HHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----------CCCcHHH
Confidence            999998521                    11223333    332  5679999999765311           1112346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+.++.... .............+         ...+++++|+|+++++
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~~~~~p~dvA~~i~~  229 (253)
T 2nm0_A          160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQVP---------LGRYARPEEIAATVRF  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTCT---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence             88988877653       357899999999998764211 11111111111111         1246789999999999


Q ss_pred             HhcCCC--CCCceEEecCCccc
Q 025702          202 VLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      ++..+.  ..|+.+.+.+|..+
T Consensus       230 l~s~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          230 LASDDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTC
T ss_pred             HhCccccCCcCcEEEECCcccc
Confidence            997642  36889999887643

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.71  E-value=1.3e-16  Score=123.19  Aligned_cols=184  Identities=15%  Similarity=0.076  Sum_probs=120.3

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-------
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-------   71 (249)
                      |||+|+||+++++.|+++|  ++|++++|++...... ..     .  ...++.++.+|++|.+++.++++..       
T Consensus         9 tGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l-~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KS-----I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH-HT-----C--CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             ecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH-Hh-----c--cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999  9999999986553211 00     0  1357899999999999988888643       


Q ss_pred             CCcEEEecCCCCh---------------------hhhHHHHHhCC-----C------------CCeEEEeeccccccCCC
Q 025702           72 GFDVVYDINGREA---------------------DEVEPILDALP-----N------------LEQFIYCSSAGVYLKSD  113 (249)
Q Consensus        72 ~~d~Vi~~~~~~~---------------------~~~~~~~~a~~-----~------------~~~~i~~Ss~~v~~~~~  113 (249)
                      ++|+|||+++...                     .+...+++++.     .            ..++|++||...+....
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            7999999998533                     11233344432     1            57999999987653321


Q ss_pred             CCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcc
Q 025702          114 LLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (249)
Q Consensus       114 ~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (249)
                      .    ...+..+...| .+|...+.+.+       ..++++++++||.+.++....                        
T Consensus       161 ~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------  212 (250)
T 1yo6_A          161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------  212 (250)
T ss_dssp             C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             c----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------------
Confidence            1    11122344456 89998887653       247999999999987773110                        


Q ss_pred             eEeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCcccc
Q 025702          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                       ..+++++|+|+.++.++..+.  ..|..+.+.+ ..++
T Consensus       213 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g-~~~~  249 (250)
T 1yo6_A          213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMRNL-KPYE  249 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEETTE-EECC
T ss_pred             -CCCCCHHHHHHHHHHHHhcccccCCCeEEEECC-cCCC
Confidence             135779999999999998754  2455555443 4343

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.71  E-value=5e-17  Score=129.26  Aligned_cols=196  Identities=11%  Similarity=0.170  Sum_probs=129.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-----ccCceEEEEeccCCHHHHHHhhhhC----
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-----FSSKILHLKGDRKDYDFVKSSLSAK----   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~d~~d~~~l~~~~~~~----   71 (249)
                      |||+|+||++++++|+++|++|++++|+........     ..+..     ...++.++.+|++|.+++.++++..    
T Consensus        24 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAA-----DELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999999865421100     00100     1357899999999999998888642    


Q ss_pred             -CCcEEEecCCCC--------------------hhhhHHHHHhC-----C-CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           72 -GFDVVYDINGRE--------------------ADEVEPILDAL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        72 -~~d~Vi~~~~~~--------------------~~~~~~~~~a~-----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                       ++|+|||+||..                    ..++.++++++     + +..++|++||...++            ..
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~~  166 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG------------FP  166 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC------------CT
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC------------CC
Confidence             699999999842                    11233444442     1 357899999876221            11


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch---HHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      ....| .+|...+.+.+       ..+++++++||++++++......   ...+........         ....+.+++
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~  237 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI---------PAKRIGVPE  237 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS---------TTSSCBCTH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC---------cccCCCCHH
Confidence            22345 78877766542       34899999999999998421111   011111111110         112477899


Q ss_pred             HHHHHHHHHhcCCC--CCCceEEecCCcccc
Q 025702          194 DLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      |+|+++++++....  ..|+.+++.+|..++
T Consensus       238 dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            99999999997532  368899999987654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.71  E-value=1.1e-17  Score=132.45  Aligned_cols=198  Identities=22%  Similarity=0.256  Sum_probs=131.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcc-ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|.||++++++|+++|++|++++|+.... ...    ..........++.++.+|++|.++++++++..     ++|
T Consensus        55 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           55 TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQ----VKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH----HHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHH----HHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999998874321 100    01112223467889999999999888877632     799


Q ss_pred             EEEecCCCCh---------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           75 VVYDINGREA---------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        75 ~Vi~~~~~~~---------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      ++||++|...                     .+...++++    +++..++|++||...+..           ......|
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  199 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP-----------SPHLLDY  199 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC-----------CCCchHH
Confidence            9999998621                     123334444    333469999999887632           1223346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.++++......        .................+..++|+|+++++
T Consensus       200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  271 (294)
T 3r3s_A          200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG--------QTQDKIPQFGQQTPMKRAGQPAELAPVYVY  271 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT--------SCGGGSTTTTTTSTTSSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC--------CCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             99988887653       35899999999999886310000        000000111111223356789999999999


Q ss_pred             HhcCCC--CCCceEEecCCccc
Q 025702          202 VLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      ++....  ..|+++++.+|..+
T Consensus       272 L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          272 LASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCccccCCCCCEEEECCCccC
Confidence            997543  36899999998754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.71  E-value=5.7e-17  Score=125.34  Aligned_cols=183  Identities=13%  Similarity=0.163  Sum_probs=122.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|+||+++++.|+++|++|++++|++....            +. ..+.++ +|+  .++++++++.. ++|+|||+
T Consensus        25 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~-~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           25 LAASRGIGRAVADVLSQEGAEVTICARNEELLK------------RS-GHRYVV-CDL--RKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH------------HT-CSEEEE-CCT--TTCHHHHHHHSCCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH------------hh-CCeEEE-eeH--HHHHHHHHHHhcCCCEEEEC
Confidence            799999999999999999999999999862211            11 246666 999  33444444433 89999999


Q ss_pred             CCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           80 NGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        80 ~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      ||....                    +    ++.++..++  +..++|++||...+..           ..+...| .+|
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK  157 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP-----------IENLYTSNSAR  157 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC-----------CCCCchHHHHH
Confidence            985311                    1    233455554  5689999999887632           1223346 889


Q ss_pred             HHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHH-HHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       133 ~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      ...+.+.+       ..++++++++||.+.++.... ....... ......+         ...+.+++|+|+++++++.
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~i~~l~s  227 (249)
T 1o5i_A          158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIP---------MRRMAKPEEIASVVAFLCS  227 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcC
Confidence            88776642       368999999999999985210 0011111 2222111         1246789999999999987


Q ss_pred             CCC--CCCceEEecCCcc
Q 025702          205 NEK--ASRQVFNISGEKY  220 (249)
Q Consensus       205 ~~~--~~~~~~~i~~~~~  220 (249)
                      .+.  ..|+.|++.+|..
T Consensus       228 ~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          228 EKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             ccccCCCCCEEEECCCcc
Confidence            532  3588999988753

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.71  E-value=4.2e-17  Score=127.31  Aligned_cols=195  Identities=21%  Similarity=0.233  Sum_probs=126.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||++++++|+++|++|++..+........+    ...+......+.++.+|++|.++++++++..     ++|+
T Consensus        33 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           33 TGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEV----AGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             ESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999866554322111    1122223467889999999999988887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||+||...                    .+...++++    +++..++|++||...+...           .....| .
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a  177 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH-----------PSYGIYAA  177 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-----------TTCHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-----------CCchHHHH
Confidence            999998631                    122233333    3334689999997764321           123346 9


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|...+.+.+       ..+++++.++||.+..+..................+         ...+..++|+|+++++++
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~  248 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAP---------LERLGTPQDIAGAVAFLA  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSST---------TCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHh
Confidence            9998887653       357999999999998874211111111222222221         224667999999999999


Q ss_pred             cCCC--CCCceEEecCCc
Q 025702          204 GNEK--ASRQVFNISGEK  219 (249)
Q Consensus       204 ~~~~--~~~~~~~i~~~~  219 (249)
                      ....  ..|+.+++.+|.
T Consensus       249 s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          249 GPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             STTTTTCCSEEEEESSSC
T ss_pred             CccccCccCCEEEeCCCc
Confidence            7643  368889988763

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.71  E-value=5.2e-17  Score=126.69  Aligned_cols=178  Identities=16%  Similarity=0.150  Sum_probs=122.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+....... .          ..++.++.+|++|.+++.++++..     ++|+
T Consensus        22 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           22 TGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-N----------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-C----------CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-h----------cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            79999999999999999999999999986653222 1          247889999999999888887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHH----HHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~----~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||...                    .+...    ++..++  +..++|++||...+..           ..+...|
T Consensus        91 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~~~~Y  159 (266)
T 3p19_A           91 IVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT-----------FPDHAAY  159 (266)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC-----------CCCCchH
Confidence            999998631                    12223    333333  6689999999877522           1223446


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++.++||.+.++................. ..+       ...+++++|+|+++++
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~-------~~r~~~pedvA~av~~  231 (266)
T 3p19_A          160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD-------MGGVLAADDVARAVLF  231 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH-------TTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc-------ccCCCCHHHHHHHHHH
Confidence             89988876642       3689999999999998752211111111111100 000       1236789999999999


Q ss_pred             HhcCCCC
Q 025702          202 VLGNEKA  208 (249)
Q Consensus       202 ~~~~~~~  208 (249)
                      +++++..
T Consensus       232 l~~~~~~  238 (266)
T 3p19_A          232 AYQQPQN  238 (266)
T ss_dssp             HHHSCTT
T ss_pred             HHcCCCC
Confidence            9998753

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.71  E-value=4.5e-17  Score=124.73  Aligned_cols=166  Identities=17%  Similarity=0.116  Sum_probs=112.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++......         .....++.++.+|++|.+++.++++..     ++|+
T Consensus        11 tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A           11 TGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL---------AAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---------HHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976442110         000136888999999999888877642     7899


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|....                    +    ++.++..++  +.+++|++||...+..           ..+...|
T Consensus        82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  150 (234)
T 2ehd_A           82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP-----------FKGGAAY  150 (234)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC-----------CTTCHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC-----------CCCCchh
Confidence            9999985311                    1    234455544  5789999999876522           1233456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..+++++++|||.+.++....         . . ..          ..+++++|+|++++.
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~-~-~~----------~~~~~~~dvA~~~~~  209 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN---------T-P-GQ----------AWKLKPEDVAQAVLF  209 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc---------c-c-cc----------cCCCCHHHHHHHHHH
Confidence             89987776542       358999999999987763110         0 0 00          115789999999999


Q ss_pred             HhcCCC
Q 025702          202 VLGNEK  207 (249)
Q Consensus       202 ~~~~~~  207 (249)
                      ++..+.
T Consensus       210 l~~~~~  215 (234)
T 2ehd_A          210 ALEMPG  215 (234)
T ss_dssp             HHHSCC
T ss_pred             HhCCCc
Confidence            998754

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.71  E-value=1.2e-16  Score=123.21  Aligned_cols=188  Identities=18%  Similarity=0.186  Sum_probs=128.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++.......        .+  .++.++.+|++|.++++++++..     ++|+
T Consensus        11 TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A           11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA--------EA--VGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HT--TTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HH--cCCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421110        00  13788999999999988887642     6999


Q ss_pred             EEecCCCChh--------------------hh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------EV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|....                    +.    +.++..++  +..++|++||...++.            .....|
T Consensus        81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~~~Y  148 (245)
T 1uls_A           81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------------LGQANY  148 (245)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC------------TTCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC------------CCchhH
Confidence            9999985311                    12    22333443  4679999999774321            122346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..++++++++||.+.++.... .............+.         ..+.+++|+|+++++
T Consensus       149 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~~~dvA~~v~~  218 (245)
T 1uls_A          149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPL---------GRAGKPLEVAYAALF  218 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCCC---------CCCcCHHHHHHHHHH
Confidence             88987776542       358999999999998875321 111122222222111         136789999999999


Q ss_pred             HhcCC--CCCCceEEecCCcc
Q 025702          202 VLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++..+  ...|+.+.+.+|..
T Consensus       219 l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          219 LLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhCchhcCCcCCEEEECCCcc
Confidence            99754  23688999988754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.71  E-value=9.4e-18  Score=131.76  Aligned_cols=198  Identities=13%  Similarity=0.181  Sum_probs=134.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhh-hhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|.||++++++|+++|++|++++|+........     ..+ .....++.++.+|++|.++++++++..     ++|
T Consensus        33 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id  107 (277)
T 4fc7_A           33 TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAA-----RKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID  107 (277)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421110     011 112457899999999999888887643     799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||...                    .+...+.++    +.  +..++|++||...+..           ......
T Consensus       108 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  176 (277)
T 4fc7_A          108 ILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG-----------QALQVH  176 (277)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT-----------CTTCHH
T ss_pred             EEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-----------CCCcHH
Confidence            9999998521                    123333333    33  4579999999876522           122334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch--HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+       ..+++++.++||.+.++......  ............++         ..+.+++|+|++
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dvA~~  247 (277)
T 4fc7_A          177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL---------QRLGNKTEIAHS  247 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT---------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC---------CCCcCHHHHHHH
Confidence            6 88988877653       35799999999999987311000  01122222233222         235679999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCccccH
Q 025702          199 FVQVLGNE--KASRQVFNISGEKYVTF  223 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~s~  223 (249)
                      ++++++..  ...|+.+++.+|..+++
T Consensus       248 v~fL~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          248 VLYLASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred             HHHHcCCccCCcCCCEEEECCCcccCC
Confidence            99999753  34689999999876654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.71  E-value=7.9e-17  Score=126.63  Aligned_cols=195  Identities=14%  Similarity=0.118  Sum_probs=132.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.......     ...+.....++.++.+|++|.+++.++++.     .++|+
T Consensus        40 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  114 (279)
T 3ctm_A           40 TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKA-----EHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDV  114 (279)
T ss_dssp             TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHH-----HHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986542110     011111235788999999999999888863     15999


Q ss_pred             EEecCCCChh----------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD----------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~~----------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |||+++....                      +    ++.++..++  +.+++|++||...+..         ....+..
T Consensus       115 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~~~~~~  185 (279)
T 3ctm_A          115 FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV---------NIPQLQA  185 (279)
T ss_dssp             EEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------CCHH
T ss_pred             EEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC---------CCCCCcc
Confidence            9999874211                      1    345666654  6789999999776421         0122334


Q ss_pred             cc-cchHHHHHHHhh-------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLES-------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~~-------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...|.+.+.       .+ +++.++|+.+.++..... ............+         ...+++++|+|+++
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p---------~~~~~~~~dvA~~~  254 (279)
T 3ctm_A          186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SKDMKAKWWQLTP---------LGREGLTQELVGGY  254 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CHHHHHHHHHHST---------TCSCBCGGGTHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-ChHHHHHHHHhCC---------ccCCcCHHHHHHHH
Confidence            46 899988887632       45 899999999988753211 1112222211111         12367899999999


Q ss_pred             HHHhcCC--CCCCceEEecCCcc
Q 025702          200 VQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++++..+  ...|+.+++.+|..
T Consensus       255 ~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          255 LYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCccccCccCCEEEECCCee
Confidence            9999763  24688999988754

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.71  E-value=1.7e-16  Score=124.46  Aligned_cols=193  Identities=15%  Similarity=0.164  Sum_probs=128.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++.......     ..+.. ..++.++.+|++|.++++++++..     ++|+
T Consensus        35 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (276)
T 2b4q_A           35 TGGSRGIGQMIAQGLLEAGARVFICARDAEACADTA-----TRLSA-YGDCQAIPADLSSEAGARRLAQALGELSARLDI  108 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----HHHTT-SSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHh-cCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            799999999999999999999999999865421100     01111 126888899999999888887642     7999


Q ss_pred             EEecCCCCh--------------------hhh----HHHHHhCC--CC----CeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA--------------------DEV----EPILDALP--NL----EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~----~~~~~a~~--~~----~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |||+||...                    .+.    +.++..++  +.    .++|++||...+...          +..
T Consensus       109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~----------~~~  178 (276)
T 2b4q_A          109 LVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM----------GEQ  178 (276)
T ss_dssp             EEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC----------CCS
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC----------CCC
Confidence            999998521                    112    22333332  33    799999998775321          111


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHc--CCCeeecCCCcceEeeeeHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKA--GRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ...| .+|...+.+.+       ..+++++.++||.+.++.... ...........  ..++         ..+.+++|+
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p~---------~r~~~p~dv  248 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIPM---------GRWGRPEEM  248 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTSTT---------SSCCCHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCCC---------CCcCCHHHH
Confidence            2145 99998887653       358999999999998874211 11111111111  1111         236789999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCc
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      |+++++++..+  ...|+.+++.+|.
T Consensus       249 A~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          249 AALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999999764  2368899998875

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.71  E-value=1.1e-15  Score=121.15  Aligned_cols=196  Identities=13%  Similarity=0.087  Sum_probs=134.3

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|  .||+++++.|+++|++|++++|+...... .     .........+.++.+|++|.++++++++..     ++
T Consensus        36 TGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~-~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (296)
T 3k31_A           36 IGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR-V-----DPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL  109 (296)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-H-----HHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHH-H-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68987  99999999999999999999998543110 0     111111245788999999999998888743     79


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||+||....                        +...++++    +++..++|++||...+..           ...
T Consensus       110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~-----------~~~  178 (296)
T 3k31_A          110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV-----------VPH  178 (296)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----------CTT
T ss_pred             CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC-----------CCC
Confidence            999999986421                        12334444    224469999999876421           223


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.++||.+.++...... ............++         ..+..++|+|
T Consensus       179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA  249 (296)
T 3k31_A          179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------RRNTTLDDVG  249 (296)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            3456 89988887653       35799999999999998643221 12223333333222         1245689999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      +++++++...  ...|+.+++.+|..+.
T Consensus       250 ~~v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          250 GAALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHcCCccCCccCCEEEECCCcccc
Confidence            9999999763  3468999999987654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.70  E-value=8.5e-17  Score=126.71  Aligned_cols=196  Identities=17%  Similarity=0.119  Sum_probs=129.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+........    ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~  110 (283)
T 1g0o_A           35 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI  110 (283)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999864321100    0111222357889999999999888777632     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      |||++|...                    .++..++++    +++..++|++||...+..          ...+...| .
T Consensus       111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~Y~a  180 (283)
T 1g0o_A          111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------AVPKHAVYSG  180 (283)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------SCSSCHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC----------CCCCCcchHH
Confidence            999998631                    122333333    445579999999776421          11123456 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc---h-------HHHHHHHHHc--CCCeeecCCCcceEeeee
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---V-------EEWFFHRLKA--GRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~---~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~i~  191 (249)
                      +|...+.+.+       ..++++++++||.+.++.....   +       .......+..  ..+         ...+.+
T Consensus       181 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~  251 (283)
T 1g0o_A          181 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP---------LRRVGL  251 (283)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT---------TCSCBC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC---------CCCCcC
Confidence            9988887653       3589999999999988631000   0       0111111111  111         123678


Q ss_pred             HHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          192 VKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++|+|+++++++....  ..|+.+++.+|.
T Consensus       252 p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          252 PIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            9999999999997642  368899998874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=2.8e-17  Score=128.53  Aligned_cols=199  Identities=18%  Similarity=0.165  Sum_probs=129.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++......         .....++.++.+|++|.++++++++..     ++|+
T Consensus        15 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A           15 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL---------EQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542110         000135788999999999988887643     7999


Q ss_pred             EEecCCCCh---------------------hhhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA---------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|...                     .+...++++    ++ +..++|++||...+...           .....|
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y  154 (270)
T 1yde_A           86 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ-----------AQAVPY  154 (270)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----------TTCHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC-----------CCCccc
Confidence            999998531                     112223333    22 35799999997653211           122346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                       .+|...+.+.+       ..++++++++||+++++....     .-............++         ..+..++|+|
T Consensus       155 ~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva  225 (270)
T 1yde_A          155 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVG  225 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC---------CCCcCHHHHH
Confidence             99988887653       358999999999999873100     0000001111111111         1356799999


Q ss_pred             HHHHHHhcCC-CCCCceEEecCCccccHHHHHH
Q 025702          197 RAFVQVLGNE-KASRQVFNISGEKYVTFDGLAR  228 (249)
Q Consensus       197 ~~~~~~~~~~-~~~~~~~~i~~~~~~s~~~l~~  228 (249)
                      +++++++... ...|+.+++.+|..+.+.....
T Consensus       226 ~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~~~  258 (270)
T 1yde_A          226 AAAVFLASEANFCTGIELLVTGGAELGYGCKAS  258 (270)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTTTSCC-----
T ss_pred             HHHHHHcccCCCcCCCEEEECCCeecccCcCcc
Confidence            9999998752 3368899999998776544433

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.70  E-value=4.4e-17  Score=126.67  Aligned_cols=201  Identities=15%  Similarity=0.105  Sum_probs=126.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||++++++|+++|++|+++++.........    ...+.....++.++.+|++|.++++++++..     ++|+
T Consensus        14 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           14 AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATA----VAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHH----HHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH----HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999966544321110    0112222467899999999999988888643     7999


Q ss_pred             EEecCCCC---------------------hhhhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGRE---------------------ADEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~---------------------~~~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||+||..                     ..+...+++++.    +..++|++||...+..          +..+...| 
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~~Y~  159 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG----------GGPGALAYA  159 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----------CSTTCHHHH
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----------CCCCcHHHH
Confidence            99999743                     112333444432    3458999999876511          11223346 


Q ss_pred             cchHHHHHHHh----h--cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          130 KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       130 ~~k~~~e~~~~----~--~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      .+|...+.+.+    +  ..++++.+.||.+..+.......+......         ........+.+++|+|+++++++
T Consensus       160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSLKREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHc
Confidence            99988887653    1  238999999999988742111101111111         11122345678999999999999


Q ss_pred             cCCC--CCCceEEecCCccccHH
Q 025702          204 GNEK--ASRQVFNISGEKYVTFD  224 (249)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~s~~  224 (249)
                      ....  ..|+.|++.+|...+..
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC--
T ss_pred             CccccCccCCEEEECCCcCCCCC
Confidence            7643  36899999998755443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.70  E-value=4.6e-16  Score=124.37  Aligned_cols=207  Identities=12%  Similarity=0.106  Sum_probs=132.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCch-------hhhhccCceEEEEeccCCHHHHHHhhhhC--
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQ-------EFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--   71 (249)
                      |||+|.||+++++.|+++|++|++++|+..............       .+......+.++.+|++|++++.++++..  
T Consensus        52 TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  131 (317)
T 3oec_A           52 TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALA  131 (317)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            799999999999999999999999998754322111111111       11223467899999999999988888643  


Q ss_pred             ---CCcEEEecCCCCh--------------------hhhHHHHHh----CC---CCCeEEEeeccccccCCCCCCCCCCC
Q 025702           72 ---GFDVVYDINGREA--------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCETD  121 (249)
Q Consensus        72 ---~~d~Vi~~~~~~~--------------------~~~~~~~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (249)
                         ++|++||+||...                    .+...++++    +.   ...++|++||...+..          
T Consensus       132 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~----------  201 (317)
T 3oec_A          132 EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG----------  201 (317)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC----------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC----------
Confidence               7999999998631                    122233333    32   2468999999876522          


Q ss_pred             CCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcC---CC----ee-ecCCCcc
Q 025702          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAG---RP----IP-IPGSGIQ  185 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~---~~----~~-~~~~~~~  185 (249)
                       ......| .+|...+.+.+       ..+++++.++||.+.++......   ........   ..    .. +......
T Consensus       202 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (317)
T 3oec_A          202 -APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEK---LLKMFLPHLENPTREDAAELFSQLTLL  277 (317)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHH---HHHHHCTTCSSCCHHHHHHHHTTTCSS
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchh---hhhhhhhhccccchhHHHHHHhhhccC
Confidence             1223346 89988877653       35899999999999887311100   00111000   00    00 0000111


Q ss_pred             eEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ...+.+++|+|+++++++...  ...|+.+++.+|..+
T Consensus       278 p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          278 PIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             SSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            146789999999999998654  236899999998654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.70  E-value=1.9e-15  Score=119.06  Aligned_cols=194  Identities=13%  Similarity=0.072  Sum_probs=129.7

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+  |+||+++++.|+++|++|++++|+... ....     ..+....+.+.++.+|++|.+++.++++..     ++
T Consensus        27 TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  100 (285)
T 2p91_A           27 TGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKRV-----REIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL  100 (285)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             ECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-HHHH-----HHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            7998  999999999999999999999998631 1000     111111134788999999999888887642     79


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      |+|||+||....                        +...++++    +. +..++|++||...+..           ..
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  169 (285)
T 2p91_A          101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV-----------VP  169 (285)
T ss_dssp             CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB-----------CT
T ss_pred             CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC-----------CC
Confidence            999999985321                        12233443    22 3479999999776422           12


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      +...| .+|...+.+.+       ..++++++++||.++++..... ....+........++         ..+.+++|+
T Consensus       170 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dv  240 (285)
T 2p91_A          170 HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------GKPITIEDV  240 (285)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            33456 89998887653       3489999999999999863221 122222333222221         125679999


Q ss_pred             HHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          196 ARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       196 a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      |+++++++....  ..|+.|++.+|..
T Consensus       241 a~~~~~l~s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          241 GDTAVFLCSDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCCcccCCCCCEEEECCCcc
Confidence            999999987532  3588899988854

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.70  E-value=8.8e-16  Score=120.68  Aligned_cols=194  Identities=9%  Similarity=0.055  Sum_probs=133.0

Q ss_pred             CCCccc--chHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~--iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+  ||+++++.|+++|++|++++|+....  .     ...+.....++.++.+|++|.++++++++..     ++
T Consensus        32 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~--~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           32 TGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKD--R-----VEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             CCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHH--H-----HHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             ECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHH--H-----HHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            799977  99999999999999999999987110  0     0111112346889999999999988888643     68


Q ss_pred             cEEEecCCCChh-------------------------hhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD-------------------------EVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (249)
Q Consensus        74 d~Vi~~~~~~~~-------------------------~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (249)
                      |+|||+||....                         +...++++    +. +..++|++||...+..           .
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~  173 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA-----------M  173 (280)
T ss_dssp             CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC-----------C
T ss_pred             CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC-----------C
Confidence            999999986321                         12223333    33 4579999999876421           2


Q ss_pred             CCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      .+...| .+|...+.+.+       ..+++++.++||.+.++.... ..............++         ..+.+++|
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~ped  244 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL---------KKNVDIME  244 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------CSCCCHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------CCCCCHHH
Confidence            233456 89988877653       367999999999999875321 1122333333332222         13566899


Q ss_pred             HHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          195 LARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       195 ~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      +|+++++++...  ...|+.+++.+|..+
T Consensus       245 vA~~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          245 VGNTVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             HHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence            999999998753  246899999998754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.70  E-value=1.1e-16  Score=122.99  Aligned_cols=187  Identities=18%  Similarity=0.247  Sum_probs=125.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++....           .+.  ++.++.+|++| +++.++++.     .++|+
T Consensus         8 TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            8 TGGSRGIGRAIAEALVARGYRVAIASRNPEEAA-----------QSL--GAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH-----------HHH--TCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------Hhh--CcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865411           011  37888999998 666655542     27999


Q ss_pred             EEecCCCCh--------------------hhh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+++...                    .+.    +.++..++  +..++|++||...+....         ..+...|
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y  144 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------PVPIPAY  144 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------TSCCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------CCCCccH
Confidence            999998531                    112    22333333  578999999988764320         1234456


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|...+.+.+       ..++++++++||.+.++...... .+.+........+         ...+.+++|+|++++
T Consensus       145 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~  215 (239)
T 2ekp_A          145 TTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP---------MGRWARPEEIARVAA  215 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHH
Confidence             89988887653       35899999999999887421100 0112222222211         123678999999999


Q ss_pred             HHhcCC--CCCCceEEecCCc
Q 025702          201 QVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +++..+  ...|+.+++.+|.
T Consensus       216 ~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          216 VLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHTSGGGTTCCSCEEEESTTT
T ss_pred             HHcCchhcCCCCCEEEECCCc
Confidence            998753  2368889988874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.70  E-value=3.6e-17  Score=127.73  Aligned_cols=201  Identities=13%  Similarity=0.114  Sum_probs=133.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhhC-CCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-GFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi   77 (249)
                      |||+|.||++++++|+++|++|++++|+........     ..+...  ...+.++.+|++|.+.+.++++.. ++|++|
T Consensus        16 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   90 (267)
T 3t4x_A           16 TGSTAGIGKAIATSLVAEGANVLINGRREENVNETI-----KEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI   90 (267)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            799999999999999999999999999865421110     011111  245788899999999999888765 799999


Q ss_pred             ecCCCCh--------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           78 DINGREA--------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        78 ~~~~~~~--------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      |+||...                    .+    ++.++..+.  +..++|++||...+.           +..+...| .
T Consensus        91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y~a  159 (267)
T 3t4x_A           91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM-----------PSQEMAHYSA  159 (267)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS-----------CCTTCHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc-----------CCCcchHHHH
Confidence            9998631                    11    233344443  457999999987752           12234456 9


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCee----------ecCCCcceEeeeeHH
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP----------IPGSGIQVTQLGHVK  193 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~~  193 (249)
                      +|...+.+.+       ..+++++.++||.+.++.     ...+...........          ..........+.+++
T Consensus       160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe  234 (267)
T 3t4x_A          160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG-----VETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH-----HHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc-----HHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHH
Confidence            9988887653       246889999999988762     111111100000000          000001123578899


Q ss_pred             HHHHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          194 DLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       194 D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      |+|+++++++...  ...|+.+++.+|...+
T Consensus       235 dvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          235 EIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            9999999999753  3468999999987654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.70  E-value=6.8e-17  Score=127.16  Aligned_cols=203  Identities=15%  Similarity=0.136  Sum_probs=133.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+.......     ...+......+.++.+|++|++++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (283)
T 3v8b_A           34 TGAGSGIGRATALALAADGVTVGALGRTRTEVEEV-----ADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDI  108 (283)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986542111     0111122457889999999999988888743     7999


Q ss_pred             EEecCCCCh---------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA---------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+||...                     .+...+++++    +  +..++|++||...+..         .+..+...
T Consensus       109 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------~~~~~~~~  179 (283)
T 3v8b_A          109 VVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT---------FTTPGATA  179 (283)
T ss_dssp             EEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------CCSTTCHH
T ss_pred             EEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC---------CCCCCchH
Confidence            999998621                     1233344442    3  5679999999775421         01123345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcce--EeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQV--TQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+       ..+++++.++||.+..+.........   ......+..........  ..+..++|+|++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~  256 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH---EEETAIPVEWPKGQVPITDGQPGRSEDVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC---HHHHSCCCBCTTCSCGGGTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc---chhhhhhhhhhhhcCccccCCCCCHHHHHHH
Confidence            6 99998887653       35789999999999887532110000   00001111111111111  245789999999


Q ss_pred             HHHHhcCCC--CCCceEEecCCcc
Q 025702          199 FVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +++++....  ..|+.+++.+|..
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             HHHHcCccccCCcCCEEEECcCcc
Confidence            999997543  3688999988753

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.70  E-value=7.2e-17  Score=125.14  Aligned_cols=188  Identities=17%  Similarity=0.091  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCe-EEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCH-HHHHHhhhhC-----
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDY-DFVKSSLSAK-----   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~-~~l~~~~~~~-----   71 (249)
                      |||+|+||++++++|+++|++ |++++|+.....  .     ..+...  ..++.++.+|++|. +++.++++..     
T Consensus        11 tGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~--~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A           11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTA--L-----AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH--H-----HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCcEEEEEecCchHHH--H-----HHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            799999999999999999997 999999864210  0     011111  24688999999998 8887777532     


Q ss_pred             CCcEEEecCCCC------------hhhhHHHHHh----CC-C----CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           72 GFDVVYDINGRE------------ADEVEPILDA----LP-N----LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        72 ~~d~Vi~~~~~~------------~~~~~~~~~a----~~-~----~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      ++|+|||+||..            ..+...++++    +. .    ..++|++||...+..           ..+...| 
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  152 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----------IHQVPVYS  152 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------CTTSHHHH
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-----------CCCchHHH
Confidence            799999999852            1223334443    22 1    467999999887532           1223346 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc--chH--HHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVE--EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      .+|...+.+.+       ..++++++++||.+.++....  ...  .........            ..++.+++|+|++
T Consensus       153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~dvA~~  220 (254)
T 1sby_A          153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQN  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh------------cCCCCCHHHHHHH
Confidence            89998887653       258999999999999873100  000  000001111            0133479999999


Q ss_pred             HHHHhcCCCCCCceEEecCCc
Q 025702          199 FVQVLGNEKASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~~~~~~~~~i~~~~  219 (249)
                      ++.+++.. ..|+.|++.+|.
T Consensus       221 i~~~~~~~-~~G~~~~v~gG~  240 (254)
T 1sby_A          221 FVKAIEAN-KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHC-CTTCEEEEETTE
T ss_pred             HHHHHHcC-CCCCEEEEeCCc
Confidence            99998743 358899998884

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.70  E-value=5.2e-16  Score=123.11  Aligned_cols=209  Identities=12%  Similarity=0.167  Sum_probs=133.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCc-------hhhhhccCceEEEEeccCCHHHHHHhhhhC--
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--   71 (249)
                      |||+|.||+++++.|+++|++|++++|++......+.....       ..+.....++.++.+|++|.+++.++++..  
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  113 (299)
T 3t7c_A           34 TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVT  113 (299)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999999985432211111111       122233467899999999999988887642  


Q ss_pred             ---CCcEEEecCCCCh---------------------hhhHHHHHh----CC---CCCeEEEeeccccccCCCCCCCCCC
Q 025702           72 ---GFDVVYDINGREA---------------------DEVEPILDA----LP---NLEQFIYCSSAGVYLKSDLLPHCET  120 (249)
Q Consensus        72 ---~~d~Vi~~~~~~~---------------------~~~~~~~~a----~~---~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (249)
                         ++|++||+||...                     .+...++++    +.   +..++|++||...+..         
T Consensus       114 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~---------  184 (299)
T 3t7c_A          114 QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG---------  184 (299)
T ss_dssp             HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC---------
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC---------
Confidence               7999999998521                     112223333    22   3568999999876421         


Q ss_pred             CCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCee------ecCCCcce
Q 025702          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP------IPGSGIQV  186 (249)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  186 (249)
                        ......| .+|...+.+.+       ..+++++.++||.+.++..........+..........      ....... 
T Consensus       185 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  261 (299)
T 3t7c_A          185 --AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-  261 (299)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-
Confidence              1223346 89988877653       35899999999999998632211110000000000000      0000001 


Q ss_pred             EeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCccc
Q 025702          187 TQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      ..+..++|+|++++++++...  ..|+.+++.+|..+
T Consensus       262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            246789999999999997643  36899999998754

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.69  E-value=4e-16  Score=121.74  Aligned_cols=197  Identities=9%  Similarity=0.068  Sum_probs=132.7

Q ss_pred             CCCccc--chHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhcc-CceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~--iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|+  ||+++++.|+++|++|++++|+...... .    ........ .++.++.+|++|.++++++++..     +
T Consensus        13 TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (266)
T 3oig_A           13 MGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKS-V----HELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV   87 (266)
T ss_dssp             ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-H----HHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHH-H----HHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            799988  9999999999999999999998533110 0    00111112 37899999999999888888643     7


Q ss_pred             CcEEEecCCCCh------------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA------------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        73 ~d~Vi~~~~~~~------------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      +|++||+++...                        .+...++++    +++..++|++||...+..           ..
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~  156 (266)
T 3oig_A           88 IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-----------MP  156 (266)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----------CT
T ss_pred             eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-----------CC
Confidence            999999998532                        012234444    234469999999876421           12


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ....| .+|...+.+.+       ..+++++.++||.+..+.... ..............+.         ..+.+++|+
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~dv  227 (266)
T 3oig_A          157 NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRTTTPEEV  227 (266)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSCCCHHHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCCCCHHHH
Confidence            23446 89988877653       357999999999998864221 1122233333332222         135678999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      |+++++++...  ...|+.+++.+|....
T Consensus       228 a~~v~~l~s~~~~~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          228 GDTAAFLFSDMSRGITGENLHVDSGFHIT  256 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHcCCchhcCcCCEEEECCCeEEe
Confidence            99999999763  2468999999987543

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.69  E-value=9.9e-16  Score=121.10  Aligned_cols=196  Identities=10%  Similarity=0.079  Sum_probs=131.5

Q ss_pred             CCCccc--chHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRF--IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~--iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+  ||+++++.|+++|++|++++|+...... .     ..+......+.++.+|++|.++++++++..     ++
T Consensus        37 TGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~-----~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  110 (293)
T 3grk_A           37 LGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-V-----EPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL  110 (293)
T ss_dssp             ECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-H-----HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             EcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-H-----HHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            799988  9999999999999999999998432110 0     111111246889999999999988888642     79


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||+||....                        +...++++    +++..++|++||...+..           ...
T Consensus       111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----------~~~  179 (293)
T 3grk_A          111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV-----------MPN  179 (293)
T ss_dssp             SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC-----------CCc
Confidence            999999986420                        12223333    334569999999876532           123


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.++||.+.++.... ..............++         ..+..++|+|
T Consensus       180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA  250 (293)
T 3grk_A          180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------RRTVTIDEVG  250 (293)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------CCCCCHHHHH
Confidence            3456 89988887653       358999999999999875221 1112223333332222         1355689999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      +++++++...  ...|+.+++.+|..++
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          251 DVGLYFLSDLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHcCccccCCcceEEEECCCcccC
Confidence            9999999753  3468999999987654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.69  E-value=1.6e-16  Score=125.36  Aligned_cols=209  Identities=16%  Similarity=0.138  Sum_probs=132.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccC----CCCCCc-------hhhhhccCceEEEEeccCCHHHHHHhhh
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQ----LPGESD-------QEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~----~~~~~~-------~~~~~~~~~v~~~~~d~~d~~~l~~~~~   69 (249)
                      |||+|.||+++++.|+++|++|++++|++......    +.....       ..+......+.++.+|++|++++.++++
T Consensus        17 TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   96 (286)
T 3uve_A           17 TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVD   96 (286)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             eCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence            79999999999999999999999999985432111    111111       1112224578999999999999888876


Q ss_pred             hC-----CCcEEEecCCCCh---------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCC
Q 025702           70 AK-----GFDVVYDINGREA---------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLP  116 (249)
Q Consensus        70 ~~-----~~d~Vi~~~~~~~---------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~  116 (249)
                      ..     ++|++||++|...                     .+...++++    +.  + ..++|++||...+..     
T Consensus        97 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  171 (286)
T 3uve_A           97 SGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA-----  171 (286)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----
T ss_pred             HHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC-----
Confidence            42     7999999998521                     112223333    22  2 468999999876521     


Q ss_pred             CCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCC------eeecCC
Q 025702          117 HCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP------IPIPGS  182 (249)
Q Consensus       117 ~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~------~~~~~~  182 (249)
                            ......| .+|...+.+.+       ..+++++.++||.+..+...................      ......
T Consensus       172 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T 3uve_A          172 ------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFH  245 (286)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTC
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhh
Confidence                  1223346 89988877653       357999999999999885322111000000000000      000011


Q ss_pred             CcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          183 GIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       183 ~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ... ..+.+++|+|++++++++..  ...|+.+++.+|..+
T Consensus       246 ~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          246 TLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            111 35778999999999999754  336899999998754

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.68  E-value=2.5e-16  Score=123.91  Aligned_cols=194  Identities=16%  Similarity=0.159  Sum_probs=132.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----CCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~~~d~V   76 (249)
                      |||+|.||+++++.|+++|++|++++|+......        ...+....+.++.+|++|.++++++++.    .++|++
T Consensus        36 TGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~--------~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           36 SGGAGGLGEATVRRLHADGLGVVIADLAAEKGKA--------LADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH--------HHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            7999999999999999999999999998654221        1112245789999999999998888764    268999


Q ss_pred             Eec-CCCCh-------------------------hhhHHHHHhC------------CCCCeEEEeeccccccCCCCCCCC
Q 025702           77 YDI-NGREA-------------------------DEVEPILDAL------------PNLEQFIYCSSAGVYLKSDLLPHC  118 (249)
Q Consensus        77 i~~-~~~~~-------------------------~~~~~~~~a~------------~~~~~~i~~Ss~~v~~~~~~~~~~  118 (249)
                      ||+ ++...                         .+..++++++            ++..++|++||...+..       
T Consensus       108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  180 (281)
T 3ppi_A          108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG-------  180 (281)
T ss_dssp             EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC-------
T ss_pred             EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC-------
Confidence            999 44310                         0122222221            13458999999877522       


Q ss_pred             CCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeee
Q 025702          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                          ..+...| .+|...+.+.+       ..+++++.++||.+..+.... .............+.        ...+.
T Consensus       181 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--------~~~~~  247 (281)
T 3ppi_A          181 ----QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPF--------PKRLG  247 (281)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCS--------SSSCB
T ss_pred             ----CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCC--------CCCCC
Confidence                2233456 89988776642       357999999999998763111 111222233333221        02467


Q ss_pred             eHHHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          191 HVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      +++|+|++++++++.+...|+.+++.+|..++
T Consensus       248 ~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          248 TPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             CHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            89999999999999876689999999987654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.68  E-value=2.1e-16  Score=120.13  Aligned_cols=177  Identities=17%  Similarity=0.137  Sum_probs=125.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||+|+||++++++|+++|++|++++|+..                         +|++|+++++++++.. ++|++||+
T Consensus        12 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------~D~~~~~~v~~~~~~~g~id~lv~n   66 (223)
T 3uce_A           12 LGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------LDISDEKSVYHYFETIGAFDHLIVT   66 (223)
T ss_dssp             ETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence            799999999999999999999999998742                         5999999998888753 79999999


Q ss_pred             CCCCh---------------------hhhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchH
Q 025702           80 NGREA---------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKL  133 (249)
Q Consensus        80 ~~~~~---------------------~~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~  133 (249)
                      +|...                     .+...+++++.    +..++|++||...+..           ..+...| .+|.
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y~asK~  135 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV-----------VANTYVKAAINA  135 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC-----------CCCchHHHHHHH
Confidence            98531                     12333444432    3458999999876522           2233456 8998


Q ss_pred             HHHHHHh----hc-CCcEEEeecceeeCCCCCcc---hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          134 NTESVLE----SK-GVNWTSLRPVYIYGPLNYNP---VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       134 ~~e~~~~----~~-~~~~~~~r~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      ..+.+.+    +. .++++.++||.+.++.....   ....+........+.         ..+.+++|+|++++++++.
T Consensus       136 a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~l~~~  206 (223)
T 3uce_A          136 AIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAMAYLFAIQN  206 (223)
T ss_dssp             HHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHHHHHHHccC
Confidence            8887653    22 38999999999998752211   111222233332222         2466799999999999987


Q ss_pred             CCCCCceEEecCCcccc
Q 025702          206 EKASRQVFNISGEKYVT  222 (249)
Q Consensus       206 ~~~~~~~~~i~~~~~~s  222 (249)
                      +...|+.+++.+|..++
T Consensus       207 ~~~tG~~i~vdgG~~~s  223 (223)
T 3uce_A          207 SYMTGTVIDVDGGALLG  223 (223)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             CCCCCcEEEecCCeecC
Confidence            66679999999987653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.68  E-value=1.1e-16  Score=124.71  Aligned_cols=192  Identities=18%  Similarity=0.253  Sum_probs=130.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++......        ..+...++.++.+|++|.+++.++++..     ++|+
T Consensus        12 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A           12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEA--------VAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            79999999999999999999999999986542111        0111246888999999999988887642     6899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||++|...                    .+...++++    +++..++|++||...++.            .+...| .
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~Y~a  151 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------------FGLAHYAA  151 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------------HHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC------------CCcHHHHH
Confidence            999988521                    122233333    322469999999877511            112345 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|...+.+.+       ..++++++++||.+.++.... .............++         ..+.+++|+|+++++++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~  221 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPL---------GRAGRPEEVAQAALFLL  221 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence            8887766542       358999999999999875221 112222222222221         13678999999999999


Q ss_pred             cCCC--CCCceEEecCCcccc
Q 025702          204 GNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       204 ~~~~--~~~~~~~i~~~~~~s  222 (249)
                      ..+.  ..|+.+++.+|..+.
T Consensus       222 s~~~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          222 SEESAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             SGGGTTCCSCEEEESTTTTTC
T ss_pred             CccccCCcCCEEEECCCcccc
Confidence            7542  368899999887543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.68  E-value=3.3e-16  Score=122.48  Aligned_cols=178  Identities=18%  Similarity=0.163  Sum_probs=115.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+......        ...+...++.++.+|++|.+++.++++..     ++|+
T Consensus        34 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           34 TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQE--------TAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998654211        11122367899999999999998888643     7999


Q ss_pred             EEecCCCChh---------------------h----hHHHHHhCC--C--CCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~----~~~~~~a~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +||+||....                     +    ++.++..+.  +  ..++|++||...+.           +..+.
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~~~~~  174 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS-----------PRPYS  174 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS-----------CCTTC
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC-----------CCCCc
Confidence            9999986311                     1    222333333  2  46999999977642           12234


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      ..| .+|...+.+.+       ..+++++.++||.+..+....     +.    ......  ........+.+++|+|++
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----~~----~~~~~~--~~~~~~~~~~~pedvA~~  243 (272)
T 4dyv_A          175 APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK-----MK----AGVPQA--DLSIKVEPVMDVAHVASA  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh-----hc----ccchhh--hhcccccCCCCHHHHHHH
Confidence            456 99988887653       358999999999998874211     00    000000  001122347889999999


Q ss_pred             HHHHhcCCCC
Q 025702          199 FVQVLGNEKA  208 (249)
Q Consensus       199 ~~~~~~~~~~  208 (249)
                      ++++++.+..
T Consensus       244 v~fL~s~~~~  253 (272)
T 4dyv_A          244 VVYMASLPLD  253 (272)
T ss_dssp             HHHHHHSCTT
T ss_pred             HHHHhCCCCc
Confidence            9999998654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.68  E-value=4.5e-16  Score=120.46  Aligned_cols=180  Identities=15%  Similarity=0.103  Sum_probs=112.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC----CCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----~~d~V   76 (249)
                      |||+|.||+++++.|+++|++|++++|+.......     ...+.....++.++.+|++|.++++++++..    ++|++
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~l   87 (252)
T 3h7a_A           13 IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPL-----VAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVT   87 (252)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH-----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEE
Confidence            79999999999999999999999999987653211     1122222457899999999999998888643    78999


Q ss_pred             EecCCCCh--------------------hhhHHH----HHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           77 YDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        77 i~~~~~~~--------------------~~~~~~----~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      ||+||...                    .+...+    +..++  +..++|++||...+..           ......| 
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~  156 (252)
T 3h7a_A           88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG-----------GSGFAAFA  156 (252)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC-----------CTTCHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC-----------CCCCccHH
Confidence            99998631                    122223    33333  5679999999776421           1223446 


Q ss_pred             cchHHHHHHHh-------hcCCcE-EEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNW-TSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~-~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      .+|...+.+.+       ..++++ +.+.||.+..+..... .......         ........ +.+++|+|+++++
T Consensus       157 asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-~~~~~~~---------~~~~~~~~-~~~pedvA~~~~~  225 (252)
T 3h7a_A          157 SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-REQMFGK---------DALANPDL-LMPPAAVAGAYWQ  225 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-chhhhhh---------hhhcCCcc-CCCHHHHHHHHHH
Confidence            99988876653       357888 8999999887642111 1111000         01111223 7889999999999


Q ss_pred             HhcCCC
Q 025702          202 VLGNEK  207 (249)
Q Consensus       202 ~~~~~~  207 (249)
                      +++.+.
T Consensus       226 l~s~~~  231 (252)
T 3h7a_A          226 LYQQPK  231 (252)
T ss_dssp             HHHCCG
T ss_pred             HHhCch
Confidence            998764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.68  E-value=3.3e-16  Score=121.95  Aligned_cols=173  Identities=17%  Similarity=0.125  Sum_probs=116.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|+.......     ...+......+.++.+|++|.+++.++++..     ++|+
T Consensus        35 TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  109 (262)
T 3rkr_A           35 TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAV-----EREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV  109 (262)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999987552211     1122222467899999999999988887642     6999


Q ss_pred             EEecCCCC-h--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGRE-A--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~-~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||++|.. .                    .+...++++    +.  +..++|++||...+.           +..+...
T Consensus       110 lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~  178 (262)
T 3rkr_A          110 LVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN-----------PVADGAA  178 (262)
T ss_dssp             EEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC-----------CCTTCHH
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC-----------CCCCCch
Confidence            99999861 1                    112233333    32  567999999977642           1223345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++.++||.+..+....         ...         ......++.++|+|++++
T Consensus       179 Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------~~~---------~~~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG---------LSA---------KKSALGAIEPDDIADVVA  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc---------ccc---------ccccccCCCHHHHHHHHH
Confidence            6 89988777652       368999999999987763110         000         011234678999999999


Q ss_pred             HHhcCCC
Q 025702          201 QVLGNEK  207 (249)
Q Consensus       201 ~~~~~~~  207 (249)
                      ++++.+.
T Consensus       241 ~l~s~~~  247 (262)
T 3rkr_A          241 LLATQAD  247 (262)
T ss_dssp             HHHTCCT
T ss_pred             HHhcCcc
Confidence            9998754

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.68  E-value=4.4e-15  Score=117.20  Aligned_cols=193  Identities=15%  Similarity=0.122  Sum_probs=128.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCC-CccccCCCCCCchhhh-hccCceEEEEeccCC----HHHHHHhhhhC---
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK-APIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLSAK---   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d----~~~l~~~~~~~---   71 (249)
                      |||+|+||+++++.|+++|++|++++|+. ..... +    ...+. .....+.++.+|++|    .+++.++++..   
T Consensus        29 TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~-~----~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           29 TGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVS-L----ADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             TTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHH-H----HHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHH-H----HHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            79999999999999999999999999987 33111 0    01111 123578899999999    88888777632   


Q ss_pred             --CCcEEEecCCCCh----------h--------------------h----hHHHHHhCC--C------CCeEEEeeccc
Q 025702           72 --GFDVVYDINGREA----------D--------------------E----VEPILDALP--N------LEQFIYCSSAG  107 (249)
Q Consensus        72 --~~d~Vi~~~~~~~----------~--------------------~----~~~~~~a~~--~------~~~~i~~Ss~~  107 (249)
                        ++|+|||+||...          .                    +    ++.++..+.  +      ..++|++||..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  183 (288)
T 2x9g_A          104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM  183 (288)
T ss_dssp             HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence              7999999998521          1                    0    112233343  2      46999999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeee
Q 025702          108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI  179 (249)
Q Consensus       108 v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  179 (249)
                      .+..           ..+...| .+|...+.+.+       ..+++++.++||.++++. .. . +..........++  
T Consensus       184 ~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~-~-~~~~~~~~~~~p~--  247 (288)
T 2x9g_A          184 VDQP-----------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM-G-EEEKDKWRRKVPL--  247 (288)
T ss_dssp             TTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS-C-HHHHHHHHHTCTT--
T ss_pred             ccCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc-C-hHHHHHHHhhCCC--
Confidence            6421           1233446 89987776653       358999999999999986 21 1 2222222222221  


Q ss_pred             cCCCcceEee-eeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          180 PGSGIQVTQL-GHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       180 ~~~~~~~~~~-i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                             ..+ ..++|+|+++++++...  ...|+.+++.+|..+
T Consensus       248 -------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          248 -------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             -------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence                   123 57899999999999753  336888999887643

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.68  E-value=3.9e-15  Score=113.28  Aligned_cols=189  Identities=15%  Similarity=0.157  Sum_probs=132.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||++-||+++++.|.++|++|++++|+.+......           ..++..+.+|++|++++++++++. ++|++||+
T Consensus        17 TGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNN   85 (242)
T 4b79_A           17 TGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFEALPRLDVLVNN   85 (242)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            799999999999999999999999999876643221           357889999999999999988765 69999999


Q ss_pred             CCCChh------------------h----hHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHH
Q 025702           80 NGREAD------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (249)
Q Consensus        80 ~~~~~~------------------~----~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (249)
                      ||....                  +    ++.++..++ +..++|++||...+-.           ......| .+|...
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~-----------~~~~~~Y~asKaav  154 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFG-----------SADRPAYSASKGAI  154 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSC-----------CSSCHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCC-----------CCCCHHHHHHHHHH
Confidence            986321                  1    222333333 4479999999775311           1122346 899877


Q ss_pred             HHHH-------hhcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC-
Q 025702          136 ESVL-------ESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-  206 (249)
Q Consensus       136 e~~~-------~~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-  206 (249)
                      ..+.       ...++++..+.||.+..|.... ...+.....+.+..++..         +..++|+|++++++++.. 
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaSd~a  225 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR---------WGEAPEVASAAAFLCGPGA  225 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCchh
Confidence            7654       2468999999999998874211 111223344444444422         345899999999998654 


Q ss_pred             -CCCCceEEecCCcc
Q 025702          207 -KASRQVFNISGEKY  220 (249)
Q Consensus       207 -~~~~~~~~i~~~~~  220 (249)
                       -..|+.+.+.+|..
T Consensus       226 ~~iTG~~l~VDGG~l  240 (242)
T 4b79_A          226 SFVTGAVLAVDGGYL  240 (242)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             cCccCceEEECccHh
Confidence             33688999988753

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.67  E-value=1.5e-16  Score=124.73  Aligned_cols=193  Identities=12%  Similarity=0.109  Sum_probs=129.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC----CCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----~~d~V   76 (249)
                      |||+|.||+++++.|+++|++|++++|+.......     ...+......+.++.+|++|.+++.++++..    ++|++
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~l  113 (275)
T 4imr_A           39 TGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAV-----QQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDIL  113 (275)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHH-----HHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEE
Confidence            79999999999999999999999999987653211     1122223467899999999988887777532    79999


Q ss_pred             EecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           77 YDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        77 i~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      ||+||...                    .+...++++    ++  +..++|++||...+.           +..+...| 
T Consensus       114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~  182 (275)
T 4imr_A          114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSVVTAYA  182 (275)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCchhhH
Confidence            99998621                    122333333    33  567999999987652           11222336 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch--HHHHHHHHHcCC-CeeecCCCcceEeeeeHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRLKAGR-PIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .+|...+.+.+       ..+++++.++||.+..+......  .+.......... ++         ..+..++|+|+++
T Consensus       183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v  253 (275)
T 4imr_A          183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GRAGRPEEMVGAA  253 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CCCcCHHHHHHHH
Confidence            99988877653       34899999999999876311000  011111111111 11         1245689999999


Q ss_pred             HHHhcCCC--CCCceEEecCC
Q 025702          200 VQVLGNEK--ASRQVFNISGE  218 (249)
Q Consensus       200 ~~~~~~~~--~~~~~~~i~~~  218 (249)
                      ++++....  ..|+.+++.+|
T Consensus       254 ~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          254 LFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHcCcccCCCCCCEEEeCCC
Confidence            99997642  36889998876

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.67  E-value=1e-16  Score=125.98  Aligned_cols=183  Identities=17%  Similarity=0.181  Sum_probs=120.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|++......     ...+..  ....+.++.+|++|.+++.++++..     ++
T Consensus        38 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  112 (279)
T 1xg5_A           38 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEEL-----AAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV  112 (279)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHH-----HHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999986542110     001111  1145788999999999988887632     79


Q ss_pred             cEEEecCCCChh--------------------h----hHHHHHhCC--CC--CeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD--------------------E----VEPILDALP--NL--EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~--~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |+|||+++....                    +    ++.++.+++  +.  .++|++||...+..         .+..+
T Consensus       113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~---------~~~~~  183 (279)
T 1xg5_A          113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPLSV  183 (279)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSCGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc---------CCCCC
Confidence            999999985211                    1    455666655  33  79999999887532         11223


Q ss_pred             CCcc-cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ...| .+|...+.+.+         ..+++++.++||.+.++..     ..    ........... ......+++++|+
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~-----~~----~~~~~~~~~~~-~~~~~~~~~~~dv  253 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA-----FK----LHDKDPEKAAA-TYEQMKCLKPEDV  253 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH-----HH----HTTTCHHHHHH-HHC---CBCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh-----hh----hcccChhHHhh-hcccccCCCHHHH
Confidence            3446 88988776542         4579999999999988731     00    00000000000 0011246789999


Q ss_pred             HHHHHHHhcCCC
Q 025702          196 ARAFVQVLGNEK  207 (249)
Q Consensus       196 a~~~~~~~~~~~  207 (249)
                      |++++++++.+.
T Consensus       254 A~~i~~l~~~~~  265 (279)
T 1xg5_A          254 AEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhcCCc
Confidence            999999998754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.67  E-value=9e-16  Score=118.98  Aligned_cols=196  Identities=16%  Similarity=0.193  Sum_probs=129.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC---------
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK---------   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~---------   71 (249)
                      |||+|.||+++++.|+++|++|+++.+.........    ...+......+.++.+|++|.+.++.+++..         
T Consensus        13 TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A           13 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET----VYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHH----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             ECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH----HHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            799999999999999999999999765543321110    0122222457888999999998888777531         


Q ss_pred             --CCcEEEecCCCCh--------------------hhhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           72 --GFDVVYDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        72 --~~d~Vi~~~~~~~--------------------~~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                        .+|++||+||...                    .+...+++++.    +..++|++||...+..           ...
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  157 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----------LPD  157 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC-----------CTT
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC-----------CCC
Confidence              3999999998631                    12333444432    3458999999876422           122


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH-HHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.++||.+..+....... ...........++         ..+.+++|+|
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva  228 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF---------NRLGEVEDIA  228 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT---------SSCBCHHHHH
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc---------CCCCCHHHHH
Confidence            3346 89988877652       358999999999998875322111 1112222222221         2356799999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++++++...  ...|+.+++.+|..
T Consensus       229 ~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          229 DTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             HHHHHHhCcccCCccCCEEEecCCee
Confidence            9999998653  34689999988753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.67  E-value=1.1e-16  Score=123.58  Aligned_cols=188  Identities=13%  Similarity=0.098  Sum_probs=128.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+......        ...+...++.++.+|++|.++++++++..     ++|+
T Consensus        12 TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A           12 TGAAQGIGKAIAARLAADGATVIVSDINAEGAKA--------AAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH--------HHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            7999999999999999999999999998654211        11122467889999999999888887643     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+||...                    .+...+.++    ++  + ..++|++||...+..           ..+...
T Consensus        84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  152 (247)
T 3rwb_A           84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG-----------TPNMAA  152 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT-----------CTTCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC-----------CCCchh
Confidence            999998631                    122223333    43  3 579999999876532           122345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc---chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|...+.+.+       ..+++++.++||.+.++....   .....+..   ...+         ...+..++|+|+
T Consensus       153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~---------~~r~~~pedva~  220 (247)
T 3rwb_A          153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVE---MLQA---------MKGKGQPEHIAD  220 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHH---HHSS---------SCSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHh---cccc---------cCCCcCHHHHHH
Confidence            6 89987776652       368999999999998763110   00000110   0011         123467899999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCc
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      ++.+++....  ..|+.+++.+|.
T Consensus       221 ~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          221 VVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHhCccccCCCCCEEEECCCc
Confidence            9999997643  368899998875

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.66  E-value=1.4e-15  Score=119.32  Aligned_cols=194  Identities=11%  Similarity=0.053  Sum_probs=129.2

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+  |+||+++++.|+++|++|++++|+... ....     ..+......+.++.+|++|.+++.++++..     ++
T Consensus        12 TGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~-~~~~-----~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   85 (275)
T 2pd4_A           12 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRV-----RPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   85 (275)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHH-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-HHHH-----HHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6998  999999999999999999999998641 1000     111111134788999999999888887642     78


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||+||....                        +...+++++.    +..++|++||...+..           ..+
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  154 (275)
T 2pd4_A           86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----------MAH  154 (275)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-----------CCC
Confidence            999999985321                        1233444432    2369999999766421           122


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..+++++.++||.+.++..... .............++         ..+.+++|+|
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dva  225 (275)
T 2pd4_A          155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVG  225 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------CCCCCHHHHH
Confidence            3346 89988887653       3489999999999998853211 112222222222221         1245789999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++++++...  ...|+.+++.++..
T Consensus       226 ~~~~~l~s~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          226 NAGMYLLSSLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999999753  23678899988764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.66  E-value=1.8e-16  Score=124.16  Aligned_cols=176  Identities=15%  Similarity=0.055  Sum_probs=120.1

Q ss_pred             CCCcccchHHHHHHHHH-cCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||+++++.|++ .|++|++++|+........     ..+.....++.++.+|++|.+++.++++..     ++|
T Consensus        10 TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A           10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-----QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-----HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-----HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            79999999999999999 8999999999865421100     111111356889999999999888887643     799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHhCC----CCCeEEEeeccccccC-CC----------CCCCCC
Q 025702           75 VVYDINGREA--------------------DEVEPILDALP----NLEQFIYCSSAGVYLK-SD----------LLPHCE  119 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a~~----~~~~~i~~Ss~~v~~~-~~----------~~~~~e  119 (249)
                      +|||+|+...                    .++.++++++.    +..++|++||...+.. ..          ...+.|
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e  164 (276)
T 1wma_A           85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  164 (276)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence            9999998531                    12334555543    2359999999776632 00          001111


Q ss_pred             C-------------------CCCCCCCcc-cchHHHHHHHh-------h----cCCcEEEeecceeeCCCCCcchHHHHH
Q 025702          120 T-------------------DTVDPKSRH-KGKLNTESVLE-------S----KGVNWTSLRPVYIYGPLNYNPVEEWFF  168 (249)
Q Consensus       120 ~-------------------~~~~~~~~~-~~k~~~e~~~~-------~----~~~~~~~~r~~~v~g~~~~~~~~~~~~  168 (249)
                      +                   .+..|...| .+|...|.+.+       .    .+++++.++||.+.++....       
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-------  237 (276)
T 1wma_A          165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-------  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------
T ss_pred             hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-------
Confidence            1                   111233567 99988877652       2    48999999999998874211       


Q ss_pred             HHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                                        ..+.+++|+|+++++++..+
T Consensus       238 ------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 ------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             ------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             ------------------cccCChhHhhhhHhhhhcCc
Confidence                              12578999999999999855

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.66  E-value=4.5e-16  Score=119.33  Aligned_cols=175  Identities=13%  Similarity=0.127  Sum_probs=120.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-------CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-------~~~   73 (249)
                      |||+|+||+++++.|+++|++|++++|++....               ....++.+|++|.+++.++++.       .++
T Consensus         9 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            9 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999876521               2356778999999888777753       289


Q ss_pred             cEEEecCCCCh------h---------------hhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           74 DVVYDINGREA------D---------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        74 d~Vi~~~~~~~------~---------------~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |+|||++|...      .               +...++++    +++..++|++||...+..           ..+...
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  142 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----------TPSMIG  142 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-----------CCCcHH
Confidence            99999998421      0               12223333    223358999999877521           123334


Q ss_pred             c-cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+         ..+++++.++||.+.++.     .    .......         ....+++.+|+|++
T Consensus       143 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~-----~----~~~~~~~---------~~~~~~~~~dvA~~  204 (236)
T 1ooe_A          143 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----N----RKWMPNA---------DHSSWTPLSFISEH  204 (236)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----H----HHHSTTC---------CGGGCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc-----h----hhcCCCc---------cccccCCHHHHHHH
Confidence            6 89988887652         335899999999998762     1    1111111         11235678999999


Q ss_pred             HHHHhcCC---CCCCceEEecCCc
Q 025702          199 FVQVLGNE---KASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~---~~~~~~~~i~~~~  219 (249)
                      ++.++..+   ...|+.+.+.++.
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHcCCCcccccccEEEEecCC
Confidence            99777332   2358888887765

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.66  E-value=6.1e-16  Score=120.40  Aligned_cols=192  Identities=19%  Similarity=0.136  Sum_probs=119.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+.......     ...+......+.++.+|++|.++++++++..     ++|+
T Consensus        10 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   84 (264)
T 3tfo_A           10 TGASGGIGEGIARELGVAGAKILLGARRQARIEAI-----ATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV   84 (264)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986542111     1122222457888999999999988887643     7999


Q ss_pred             EEecCCCChh--------------------hhH----HHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------EVE----PILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~~~----~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||....                    +..    .++..++  +..++|++||...+..           ......|
T Consensus        85 lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-----------~~~~~~Y  153 (264)
T 3tfo_A           85 LVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV-----------VPTAAVY  153 (264)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc-----------CCCChhH
Confidence            9999986311                    122    2333333  5679999999876522           1223346


Q ss_pred             -cchHHHHHHHh----h-cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          130 -KGKLNTESVLE----S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       130 -~~k~~~e~~~~----~-~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                       .+|...+.+.+    + .+++++.++||.+..+.....     .    .........  .....+..++|+|+++++++
T Consensus       154 ~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~-----~----~~~~~~~~~--~~~~~~~~pedvA~~v~~l~  222 (264)
T 3tfo_A          154 CATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTI-----T----HEETMAAMD--TYRAIALQPADIARAVRQVI  222 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccc-----c----chhHHHHHH--hhhccCCCHHHHHHHHHHHh
Confidence             89988777653    2 378999999999987732110     0    000000000  01112468999999999999


Q ss_pred             cCCCC--CCceEEecCCc
Q 025702          204 GNEKA--SRQVFNISGEK  219 (249)
Q Consensus       204 ~~~~~--~~~~~~i~~~~  219 (249)
                      +.+..  .+++.....++
T Consensus       223 s~~~~~~~~~i~i~p~~~  240 (264)
T 3tfo_A          223 EAPQSVDTTEITIRPTAS  240 (264)
T ss_dssp             HSCTTEEEEEEEEEECC-
T ss_pred             cCCccCccceEEEecCcc
Confidence            88653  23444333333

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.66  E-value=8.9e-16  Score=123.24  Aligned_cols=194  Identities=11%  Similarity=0.039  Sum_probs=130.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEe-cCCCccccCCCCCCchhhh-hccCceEEEEeccCCHH----------------
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~----------------   62 (249)
                      |||+|+||+++++.|+++|++|++++ |+.......     ...+. ....++.++.+|++|.+                
T Consensus        52 TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~  126 (328)
T 2qhx_A           52 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL-----SATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF  126 (328)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-----HHHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence            79999999999999999999999999 875432110     01111 11357889999999988                


Q ss_pred             -HHHHhhhhC-----CCcEEEecCCCCh-----------------------hh-----------hHHHHHh----CC--C
Q 025702           63 -FVKSSLSAK-----GFDVVYDINGREA-----------------------DE-----------VEPILDA----LP--N   96 (249)
Q Consensus        63 -~l~~~~~~~-----~~d~Vi~~~~~~~-----------------------~~-----------~~~~~~a----~~--~   96 (249)
                       ++.++++..     ++|+|||+||...                       ..           ...++++    +.  +
T Consensus       127 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  206 (328)
T 2qhx_A          127 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  206 (328)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence             888777643     7999999998521                       11           1122222    22  3


Q ss_pred             ------CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc
Q 025702           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (249)
Q Consensus        97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~  162 (249)
                            ..++|++||...+..           ..+...| .+|...+.+.+       ..+++++.++||.+.++. . .
T Consensus       207 ~~~~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-~  273 (328)
T 2qhx_A          207 AKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M  273 (328)
T ss_dssp             GGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-S
T ss_pred             CcCCCCCcEEEEECchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-c
Confidence                  579999999876421           1233456 89988887653       358999999999999886 2 2


Q ss_pred             hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      . +..........++   +     ..+..++|+|+++++++...  ...|+.+++.+|..+
T Consensus       274 ~-~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          274 P-PAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             C-HHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             c-HHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            2 2233333332221   1     02567999999999999753  336889999888644

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.65  E-value=4.1e-15  Score=114.78  Aligned_cols=189  Identities=14%  Similarity=0.115  Sum_probs=121.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++.....        ...+...++.++.+|++|.++++++++..     ++|+
T Consensus         6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQE--------LKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            7999999999999999999999999998644211        01111246889999999999999888743     6999


Q ss_pred             EEecCCCCh---------------------hhhHH----HHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREA---------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~---------------------~~~~~----~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||++|...                     .+...    ++..++  +..++|++||...+..           ..+...
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~  146 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----------YAGGNV  146 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC-----------CCCCch
Confidence            999998531                     01122    233332  5689999999876421           122345


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceee-CCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.+       ..+++++.++||.+. .+........    .  ........    ....+++++|+|+++
T Consensus       147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~----~--~~~~~~~~----~~~~~~~p~dvA~~v  216 (248)
T 3asu_A          147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG----D--DGKAEKTY----QNTVALTPEDVSEAV  216 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC--------------------------------CCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC----c--hHHHHHHH----hccCCCCHHHHHHHH
Confidence            6 99998887653       347999999999998 4531110000    0  00000000    012346899999999


Q ss_pred             HHHhcCCC-CCCceEEecCC
Q 025702          200 VQVLGNEK-ASRQVFNISGE  218 (249)
Q Consensus       200 ~~~~~~~~-~~~~~~~i~~~  218 (249)
                      +++++.+. ..+..+.+...
T Consensus       217 ~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          217 WWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHHSCTTCCCCEEEECCT
T ss_pred             HHHhcCCccceeeEEEEccc
Confidence            99998643 35666666554

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.65  E-value=6.4e-17  Score=125.96  Aligned_cols=202  Identities=12%  Similarity=0.084  Sum_probs=125.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|........  +.....+.....++.++.+|++|.++++++++..     ++|+
T Consensus        17 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   94 (262)
T 3ksu_A           17 AGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTA--NKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDI   94 (262)
T ss_dssp             ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHH--HHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHH--HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999998865431110  0000112222457899999999999998888642     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||+||...                    .+...+++++    ++..++|++||...+...           .....| .
T Consensus        95 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~-----------~~~~~Y~a  163 (262)
T 3ksu_A           95 AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT-----------GFYSTYAG  163 (262)
T ss_dssp             EEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH-----------CCCCC---
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC-----------CCCchhHH
Confidence            999998531                    1233344442    244689999998765321           112335 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|...+.+.+       ..+++++.+.||.+..+..........         ............+..++|+|+++++++
T Consensus       164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---------~~~~~~~~~~~r~~~pedvA~~v~~L~  234 (262)
T 3ksu_A          164 NKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES---------TAFHKSQAMGNQLTKIEDIAPIIKFLT  234 (262)
T ss_dssp             --CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------------CCCCSCCGGGTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH---------HHHHHhcCcccCCCCHHHHHHHHHHHc
Confidence            8888777653       347899999999987652100000000         000011112234678899999999999


Q ss_pred             cCC-CCCCceEEecCCccccHH
Q 025702          204 GNE-KASRQVFNISGEKYVTFD  224 (249)
Q Consensus       204 ~~~-~~~~~~~~i~~~~~~s~~  224 (249)
                      ... ...|+.+++.+|......
T Consensus       235 s~~~~itG~~i~vdGg~~~~~~  256 (262)
T 3ksu_A          235 TDGWWINGQTIFANGGYTTREG  256 (262)
T ss_dssp             TTTTTCCSCEEEESTTCCCC--
T ss_pred             CCCCCccCCEEEECCCccCCCc
Confidence            862 236899999988755443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.65  E-value=8.9e-17  Score=125.89  Aligned_cols=171  Identities=15%  Similarity=0.152  Sum_probs=119.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|++......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        37 TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  111 (272)
T 1yb1_A           37 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEET-----AAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI  111 (272)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHH-----HHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            79999999999999999999999999986542110     0111122357899999999999888877642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      |||++|....                    +    ++.++..++  +..++|++||...+..           ..+...|
T Consensus       112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  180 (272)
T 1yb1_A          112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-----------VPFLLAY  180 (272)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-----------HHHHHHH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----------CCCchhH
Confidence            9999986311                    1    222333333  5679999999876522           1122346


Q ss_pred             -cchHHHHHHHh----------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          130 -KGKLNTESVLE----------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       130 -~~k~~~e~~~~----------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                       .+|...+.+.+          ..++++++++|+++.++.....              .      .....+++++|+|++
T Consensus       181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~--------------~------~~~~~~~~~~dva~~  240 (272)
T 1yb1_A          181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--------------S------TSLGPTLEPEEVVNR  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--------------H------HHHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc--------------c------ccccCCCCHHHHHHH
Confidence             88988877652          2378999999999988742110              0      012346789999999


Q ss_pred             HHHHhcCCC
Q 025702          199 FVQVLGNEK  207 (249)
Q Consensus       199 ~~~~~~~~~  207 (249)
                      ++.++..+.
T Consensus       241 i~~~~~~~~  249 (272)
T 1yb1_A          241 LMHGILTEQ  249 (272)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHcCC
Confidence            999998765

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.65  E-value=7.4e-16  Score=123.25  Aligned_cols=189  Identities=10%  Similarity=0.084  Sum_probs=114.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|+||++++++|+++|++|++++|+..+.....     ..+...  ...+.++.+|++|.+++.++++..     ++
T Consensus        14 TGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (319)
T 3ioy_A           14 TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKAL-----ATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV   88 (319)
T ss_dssp             ETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred             cCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999876522110     011111  127899999999999888887642     78


Q ss_pred             cEEEecCCCCh--------------------hhhHHHHHhCC------------CCCeEEEeeccccccCCCCCCCCCCC
Q 025702           74 DVVYDINGREA--------------------DEVEPILDALP------------NLEQFIYCSSAGVYLKSDLLPHCETD  121 (249)
Q Consensus        74 d~Vi~~~~~~~--------------------~~~~~~~~a~~------------~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (249)
                      |+|||+||...                    .++.++++++.            +..++|++||...+...         
T Consensus        89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~---------  159 (319)
T 3ioy_A           89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA---------  159 (319)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC---------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC---------
Confidence            99999998521                    12333333321            24579999998775321         


Q ss_pred             CCCCCCcc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHc---CCCeeecCCCcceEee
Q 025702          122 TVDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKA---GRPIPIPGSGIQVTQL  189 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~  189 (249)
                        .....| .+|...+.+.       ...++++++++||.|.++..... ..+..+.....   ...+....  ......
T Consensus       160 --~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  235 (319)
T 3ioy_A          160 --GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLA--GVHEFG  235 (319)
T ss_dssp             --SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------C--CGGGSS
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHH--HhhhcC
Confidence              122346 9998555443       34589999999999988742111 11111100000   00000000  011122


Q ss_pred             eeHHHHHHHHHHHhcCCC
Q 025702          190 GHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~  207 (249)
                      ++++|+|+.++.+++.+.
T Consensus       236 ~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          236 MEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             BCHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHcCC
Confidence            789999999999998864

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.65  E-value=1.4e-15  Score=118.53  Aligned_cols=197  Identities=16%  Similarity=0.135  Sum_probs=129.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-c-cCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-F-SSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|.||+++++.|+++|++|++++|+........     ..+.. . ...+.++.+|++|.+++.++++..     ++
T Consensus        14 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (265)
T 3lf2_A           14 TGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAE-----SALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA   88 (265)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999865421110     01111 1 234889999999999888887643     79


Q ss_pred             cEEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |++||++|...                    .+...++++    ++  +..++|++||...+..           .....
T Consensus        89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  157 (265)
T 3lf2_A           89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP-----------EPHMV  157 (265)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC-----------CTTBH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC-----------CCCch
Confidence            99999998631                    122223333    33  4578999999776421           12234


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc---------hHHHHHHHHHcCCCeeecCCCcceEeee
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP---------VEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                      .| .+|...+.+.+       ..+++++.++||.+.++.....         ....+..........       ....+.
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~r~~  230 (265)
T 3lf2_A          158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQI-------PLGRLG  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTC-------TTCSCB
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCC-------CcCCCc
Confidence            46 89988877653       3579999999999987631000         001111111111101       112366


Q ss_pred             eHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          191 HVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      .++|+|+++++++...  ...|+.+++.+|..
T Consensus       231 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          231 KPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            7999999999999753  34688999988764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.65  E-value=2.3e-15  Score=117.42  Aligned_cols=178  Identities=17%  Similarity=0.170  Sum_probs=123.3

Q ss_pred             CCCcccchHHHHHHHHHcC---CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC------
Q 025702            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~------   71 (249)
                      |||+|+||++++++|+++|   ++|++++|+...... +     ..+.....++.++.+|++|.+++.++++..      
T Consensus        27 TGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~-----~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  100 (267)
T 1sny_A           27 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-L-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD  100 (267)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-H-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             ECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-H-----HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            7999999999999999999   999999998765221 0     111112357899999999999888887643      


Q ss_pred             -CCcEEEecCCCCh---------------------hhhHHHHHhCC-----C------------CCeEEEeeccccccCC
Q 025702           72 -GFDVVYDINGREA---------------------DEVEPILDALP-----N------------LEQFIYCSSAGVYLKS  112 (249)
Q Consensus        72 -~~d~Vi~~~~~~~---------------------~~~~~~~~a~~-----~------------~~~~i~~Ss~~v~~~~  112 (249)
                       ++|+|||+++...                     .+...+++++.     .            ..++|++||...+...
T Consensus       101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  180 (267)
T 1sny_A          101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  180 (267)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence             6999999998532                     11223333321     1            4789999998875332


Q ss_pred             CCCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCc
Q 025702          113 DLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGI  184 (249)
Q Consensus       113 ~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (249)
                      .        +..+...| .+|...+.+.+       ..++++++++||++..+....                       
T Consensus       181 ~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------  229 (267)
T 1sny_A          181 N--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------------  229 (267)
T ss_dssp             C--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------
T ss_pred             C--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------
Confidence            1        11233456 89998887653       258999999999998763210                       


Q ss_pred             ceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecC
Q 025702          185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNISG  217 (249)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~  217 (249)
                        ..++..+|+|+.++.++...  ...|..+.+.+
T Consensus       230 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  262 (267)
T 1sny_A          230 --SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDG  262 (267)
T ss_dssp             --TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTS
T ss_pred             --CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCC
Confidence              02467899999999999753  23455555443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.65  E-value=8.9e-16  Score=119.51  Aligned_cols=192  Identities=14%  Similarity=0.209  Sum_probs=125.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||+++++.|+++|++|++++|+.......     ...+.....++.++.+|++|.+++.++++..     ++|+
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (262)
T 1zem_A           13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKA-----EASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   87 (262)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986542110     0111111346889999999999888777642     7999


Q ss_pred             EEecCCCC-h--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGRE-A--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~-~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |||++|.. .                    .+...++++    +.  +..++|++||...+...           .....
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~  156 (262)
T 1zem_A           88 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----------PNMAA  156 (262)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----------TTBHH
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCCch
Confidence            99999853 1                    012223333    32  45799999997765221           12334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH---------------HH-HHHHHHcCCCeeecCCCc
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE---------------EW-FFHRLKAGRPIPIPGSGI  184 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~---------------~~-~~~~~~~~~~~~~~~~~~  184 (249)
                      | .+|...+.+.+       ..+++++.++||.+..+... ...               .. .........++       
T Consensus       157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------  228 (262)
T 1zem_A          157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMW-ERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-------  228 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHH-HHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhh-hhccchhhhccccccccCHHHHHHHHHhcCCC-------
Confidence            6 88987776542       35899999999998776310 000               00 11111111111       


Q ss_pred             ceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCC
Q 025702          185 QVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGE  218 (249)
Q Consensus       185 ~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (249)
                        ..+..++|+|+++++++...  ...|+.+.+.+|
T Consensus       229 --~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          229 --RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             --SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             --CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence              13567899999999999753  235778887664

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.65  E-value=1.1e-15  Score=118.37  Aligned_cols=194  Identities=13%  Similarity=0.132  Sum_probs=129.3

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||+|.||++++++|+++|  +.|++++|+......        ...+...++.++.+|++|.++++++++..     ++
T Consensus         8 TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKK--------LKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHH--------HHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHH--------HHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            7999999999999999985  789988888654211        11122457899999999999998888643     79


Q ss_pred             cEEEecCCCCh---------------------hhhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREA---------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        74 d~Vi~~~~~~~---------------------~~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      |++||+||...                     .+...++++    ++ ...++|++||...+..           ..+..
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~-----------~~~~~  148 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMY-----------FSSWG  148 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCS-----------SCCSH
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccC-----------CCCcc
Confidence            99999998621                     122333333    23 2379999999776421           22334


Q ss_pred             cc-cchHHHHHHHhh-----cCCcEEEeecceeeCCCCCcc--------hHHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          128 RH-KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNP--------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       128 ~~-~~k~~~e~~~~~-----~~~~~~~~r~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      .| .+|...+.+.+.     .+++++.++||.+.++.....        .............+         ...+.+++
T Consensus       149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~  219 (254)
T 3kzv_A          149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------NNQLLDSS  219 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------TC----CH
T ss_pred             hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------cCCcCCcc
Confidence            56 999888876532     478999999999998753111        01122222222111         12466789


Q ss_pred             HHHHHHHHHhcCCC---CCCceEEecCCcccc
Q 025702          194 DLARAFVQVLGNEK---ASRQVFNISGEKYVT  222 (249)
Q Consensus       194 D~a~~~~~~~~~~~---~~~~~~~i~~~~~~s  222 (249)
                      |+|+++++++....   ..|+.+++.+++...
T Consensus       220 dva~~v~~L~s~~~~~~itG~~i~vdg~~~~~  251 (254)
T 3kzv_A          220 VPATVYAKLALHGIPDGVNGQYLSYNDPALAD  251 (254)
T ss_dssp             HHHHHHHHHHHHCCCGGGTTCEEETTCGGGGG
T ss_pred             cHHHHHHHHHhhcccCCCCccEEEecCccccc
Confidence            99999999997652   478899988876543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.64  E-value=2.5e-15  Score=115.58  Aligned_cols=175  Identities=11%  Similarity=0.065  Sum_probs=122.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-------CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-------~~~   73 (249)
                      |||+|+||++++++|+++|++|++++|++....               ....++.+|++|.+++.++++.       .++
T Consensus        13 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A           13 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            799999999999999999999999999875421               2356778999999988887763       279


Q ss_pred             cEEEecCCCCh------h---------------hhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           74 DVVYDINGREA------D---------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        74 d~Vi~~~~~~~------~---------------~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |++||++|...      .               +...++++    +++..++|++||...+..           ..+...
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  146 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------TPGMIG  146 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----------CCCchH
Confidence            99999998521      0               12223333    222369999999877532           122334


Q ss_pred             c-cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+         ..+++++.++||.+-.+.     .    .......         ....+++.+|+|++
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~-----~----~~~~~~~---------~~~~~~~~~~vA~~  208 (241)
T 1dhr_A          147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-----N----RKSMPEA---------DFSSWTPLEFLVET  208 (241)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-----H----HHHSTTS---------CGGGSEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc-----c----cccCcch---------hhccCCCHHHHHHH
Confidence            6 89998887653         346899999999987761     1    1111111         11235678999999


Q ss_pred             HHHHhcCCC--CCCceEEecCCc
Q 025702          199 FVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++++....  ..|+.+.+.++.
T Consensus       209 v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          209 FHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHHhcCCCcCccceEEEEeCCC
Confidence            999997643  357888887754

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.64  E-value=1.3e-15  Score=116.60  Aligned_cols=185  Identities=18%  Similarity=0.122  Sum_probs=123.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||++++++|+++|++|++++|+........     ..+. .....+.++.+|++|.+++.++++..     ++|
T Consensus         8 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (235)
T 3l77_A            8 TGASRGIGEAIARALARDGYALALGARSVDRLEKIA-----HELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVD   82 (235)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCS
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            799999999999999999999999999865422110     0111 22467899999999999999888643     799


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      ++||++|...                    .+...++++    ++ +..++|++||...+..           ......|
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~~Y  151 (235)
T 3l77_A           83 VVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL-----------IPYGGGY  151 (235)
T ss_dssp             EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-----------CTTCHHH
T ss_pred             EEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-----------CCCcchH
Confidence            9999998631                    123333443    23 3457777777554311           1122345


Q ss_pred             -cchHHHHHHHh-----hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          130 -KGKLNTESVLE-----SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       130 -~~k~~~e~~~~-----~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                       .+|...+.+.+     ..+++++.++||.+..+.....             .    . ......++.++|+|+++++++
T Consensus       152 ~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~-------------~----~-~~~~~~~~~p~dva~~v~~l~  213 (235)
T 3l77_A          152 VSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK-------------P----G-KPKEKGYLKPDEIAEAVRCLL  213 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC-------------S----C-CCGGGTCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc-------------C----C-cccccCCCCHHHHHHHHHHHH
Confidence             89988887764     3589999999999977632110             0    0 011124678999999999999


Q ss_pred             cCCCC--CCceEEecCCc
Q 025702          204 GNEKA--SRQVFNISGEK  219 (249)
Q Consensus       204 ~~~~~--~~~~~~i~~~~  219 (249)
                      +.+..  .++.+...+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~  231 (235)
T 3l77_A          214 KLPKDVRVEELMLRSVYQ  231 (235)
T ss_dssp             TSCTTCCCCEEEECCTTS
T ss_pred             cCCCCCccceEEEeeccc
Confidence            88653  45555555544

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.64  E-value=3.2e-15  Score=114.41  Aligned_cols=186  Identities=17%  Similarity=0.154  Sum_probs=128.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|+++|++|++++|++....+.         .+-..++..+.+|++|+++++++++.     -++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~---------~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            8 TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF---------AKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986553221         11145788999999999988887753     27999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||+||....                    +    ++.++..+. +..++|++||...+..           ......| 
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~-----------~~~~~~Y~  147 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQS-----------EPDSEAYA  147 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSC-----------CTTCHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccC-----------CCCCHHHH
Confidence            9999986321                    1    222333343 4579999999776421           1112345 


Q ss_pred             cchHHHHHHHh------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          130 KGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       130 ~~k~~~e~~~~------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      .+|.....+.+      ..++++..+.||.+-.+...     .+.....+..++.         -+..++|+|+++++++
T Consensus       148 asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~-----~~~~~~~~~~Pl~---------R~g~pediA~~v~fL~  213 (247)
T 3ged_A          148 SAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ-----EFTQEDCAAIPAG---------KVGTPKDISNMVLFLC  213 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------CCHHHHHTSTTS---------SCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH-----HHHHHHHhcCCCC---------CCcCHHHHHHHHHHHH
Confidence            88877765542      13789999999998776421     1122222333321         2345899999999999


Q ss_pred             cCCCCCCceEEecCCcc
Q 025702          204 GNEKASRQVFNISGEKY  220 (249)
Q Consensus       204 ~~~~~~~~~~~i~~~~~  220 (249)
                      +..-..|+.+.+.+|-.
T Consensus       214 s~~~iTG~~i~VDGG~s  230 (247)
T 3ged_A          214 QQDFITGETIIVDGGMS  230 (247)
T ss_dssp             HCSSCCSCEEEESTTGG
T ss_pred             hCCCCCCCeEEECcCHH
Confidence            87666799999988854

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.63  E-value=1.5e-15  Score=117.55  Aligned_cols=191  Identities=13%  Similarity=0.104  Sum_probs=125.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEecc--CCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~--~d~~~l~~~~~~~-----~   72 (249)
                      |||+|.||+++++.|+++|++|++++|+........     ..+.. ....+.++.+|+  +|.+++.++++..     +
T Consensus        18 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   92 (252)
T 3f1l_A           18 TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVA-----SHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR   92 (252)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999865522110     11111 123788999999  8888887777642     7


Q ss_pred             CcEEEecCCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        73 ~d~Vi~~~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +|++||+||...                     .+...++++    ++  +..++|++||...+..           ..+
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~  161 (252)
T 3f1l_A           93 LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG-----------RAN  161 (252)
T ss_dssp             CSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC-----------CTT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC-----------CCC
Confidence            999999998521                     122233333    33  5679999999776421           122


Q ss_pred             CCcc-cchHHHHHHHh----h--cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          126 KSRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~----~--~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      ...| .+|...+.+.+    +  ..++++.+.||.+..+.         ........         ....+..++|++++
T Consensus       162 ~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~---------~~~~~~~~---------~~~~~~~p~dva~~  223 (252)
T 3f1l_A          162 WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM---------RASAFPTE---------DPQKLKTPADIMPL  223 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH---------HHHHCTTC---------CGGGSBCTGGGHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch---------hhhhCCcc---------chhccCCHHHHHHH
Confidence            3446 99988887653    2  23889999999886651         11111111         11235678999999


Q ss_pred             HHHHhcCCC--CCCceEEecCCccccHHH
Q 025702          199 FVQVLGNEK--ASRQVFNISGEKYVTFDG  225 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~~~s~~~  225 (249)
                      +++++....  ..|+.+++.+|...++.|
T Consensus       224 ~~~L~s~~~~~itG~~i~vdgG~~~~~~q  252 (252)
T 3f1l_A          224 YLWLMGDDSRRKTGMTFDAQPGRKPGISQ  252 (252)
T ss_dssp             HHHHHSGGGTTCCSCEEESSCC-------
T ss_pred             HHHHcCccccCCCCCEEEeCCCcCCCCCC
Confidence            999997643  368999999988766543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.63  E-value=2.6e-15  Score=115.00  Aligned_cols=169  Identities=17%  Similarity=0.154  Sum_probs=116.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++|+.......        ..+...++.++.+|++|.++++++++..     ++|+
T Consensus         9 TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQ--------ELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            79999999999999999999999999986542210        1111346899999999999988887643     7899


Q ss_pred             EEecCCCCh--------------------hhh----HHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREA--------------------DEV----EPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~----~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||+||...                    .+.    +.++..++ +..++|++||...+..           ......| 
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~  149 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG-----------KANESLYC  149 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSS-----------CSSHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCC-----------CCCCcHHH
Confidence            999998631                    122    22333333 3349999999776421           1122346 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|...+.+.+       ..+++++.++||.+..+.....         ..          .....+.+++|+|++++++
T Consensus       150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---------~~----------~~~~~~~~pedvA~~v~~l  210 (235)
T 3l6e_A          150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT---------DH----------VDPSGFMTPEDAAAYMLDA  210 (235)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc---------CC----------CCCcCCCCHHHHHHHHHHH
Confidence            99988887653       3578999999999987731100         00          0112467899999999999


Q ss_pred             hcCCC
Q 025702          203 LGNEK  207 (249)
Q Consensus       203 ~~~~~  207 (249)
                      ++.+.
T Consensus       211 ~~~~~  215 (235)
T 3l6e_A          211 LEARS  215 (235)
T ss_dssp             TCCCS
T ss_pred             HhCCC
Confidence            98764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.63  E-value=4.3e-15  Score=117.01  Aligned_cols=189  Identities=17%  Similarity=0.227  Sum_probs=124.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCC---chhhhhccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|.||++++++|+++|++|++++|+..+... +....   ...+.....++.++.+|++|.+++.++++..     +
T Consensus        15 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   93 (285)
T 3sc4_A           15 SGGSRGIGLAIAKRVAADGANVALVAKSAEPHPK-LPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGG   93 (285)
T ss_dssp             ESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSS-SCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhh-hhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999999875322 11111   1122233567999999999999988888643     8


Q ss_pred             CcEEEecCCCCh--------------------hhhHHH----HHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA--------------------DEVEPI----LDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        73 ~d~Vi~~~~~~~--------------------~~~~~~----~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +|++||+||...                    .+...+    +..++  +..++|++||...+...          ..+.
T Consensus        94 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~  163 (285)
T 3sc4_A           94 IDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----------WLRP  163 (285)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG----------GSCS
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC----------CCCC
Confidence            999999998631                    112223    33444  45799999997653211          1122


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecce-eeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~-v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ..| .+|...+.+.+       ..+++++.++||+ +-.+     +    .........        ....+..++|+|+
T Consensus       164 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-----~----~~~~~~~~~--------~~~r~~~pedvA~  226 (285)
T 3sc4_A          164 TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-----A----VQNLLGGDE--------AMARSRKPEVYAD  226 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-----H----HHHHHTSCC--------CCTTCBCTHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-----H----HHhhccccc--------cccCCCCHHHHHH
Confidence            446 89988877653       3689999999984 3332     1    122211111        1123567899999


Q ss_pred             HHHHHhcCCC-CCCceEEecC
Q 025702          198 AFVQVLGNEK-ASRQVFNISG  217 (249)
Q Consensus       198 ~~~~~~~~~~-~~~~~~~i~~  217 (249)
                      ++++++..+. ..|+.+.+.+
T Consensus       227 ~~~~l~s~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          227 AAYVVLNKPSSYTGNTLLCED  247 (285)
T ss_dssp             HHHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHHhCCcccccceEEEEcC
Confidence            9999998753 3455555443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.63  E-value=2.7e-15  Score=117.14  Aligned_cols=198  Identities=16%  Similarity=0.124  Sum_probs=132.7

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhh-hhccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+  |.||++++++|+++|++|++++|+.........    ..+ .....++.++.+|++|.++++++++..     +
T Consensus        26 TGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (267)
T 3gdg_A           26 TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENV----KELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ  101 (267)
T ss_dssp             TTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHH----HHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHH----HHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            7999  899999999999999999999998765311100    111 122467899999999999988887643     7


Q ss_pred             CcEEEecCCCCh--------------------hhhHHHHHhC----C--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA--------------------DEVEPILDAL----P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        73 ~d~Vi~~~~~~~--------------------~~~~~~~~a~----~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +|++||+||...                    .+...+++++    +  +..++|++||...+...         ...+.
T Consensus       102 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~~~~~  172 (267)
T 3gdg_A          102 IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN---------FPQEQ  172 (267)
T ss_dssp             CSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------SSSCC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------CCCCC
Confidence            899999998631                    1233333332    3  56799999997764221         11233


Q ss_pred             Ccc-cchHHHHHHHh----h--cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          127 SRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~----~--~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      ..| .+|...+.+.+    +  ..++++.+.||.+..+... ..............+         ...+.+++|+|+++
T Consensus       173 ~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~---------~~r~~~~~dva~~~  242 (267)
T 3gdg_A          173 TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD-FVPKETQQLWHSMIP---------MGRDGLAKELKGAY  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG-GSCHHHHHHHHTTST---------TSSCEETHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh-hCCHHHHHHHHhcCC---------CCCCcCHHHHHhHh
Confidence            456 99988887653    1  2278999999999877421 111222222222222         22466789999999


Q ss_pred             HHHhcCC--CCCCceEEecCCccc
Q 025702          200 VQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++++...  ...|+.+++.+|..+
T Consensus       243 ~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          243 VYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             heeecCccccccCCEEEECCceec
Confidence            9999763  346899999988653

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.62  E-value=6.5e-15  Score=116.03  Aligned_cols=192  Identities=13%  Similarity=0.088  Sum_probs=129.2

Q ss_pred             CCCcccchHHHHHHHHHcCC---eEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhC----
Q 025702            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK----   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~----   71 (249)
                      |||+|.||+++++.|+++|+   +|++++|+........     ..+..  ...++.++.+|++|.++++++++..    
T Consensus        39 TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  113 (287)
T 3rku_A           39 TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELK-----KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF  113 (287)
T ss_dssp             ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----HHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred             ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999987   9999999865521110     01111  1357889999999999999888753    


Q ss_pred             -CCcEEEecCCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCC
Q 025702           72 -GFDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTV  123 (249)
Q Consensus        72 -~~d~Vi~~~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~  123 (249)
                       ++|++||+||...                     .+...++++    ++  +..++|++||...+.           +.
T Consensus       114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~~  182 (287)
T 3rku_A          114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD-----------AY  182 (287)
T ss_dssp             CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CC
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC-----------CC
Confidence             6999999998532                     122333333    33  567999999977642           12


Q ss_pred             CCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCC---cchHHHHHHHHHcCCCeeecCCCcceEeeeeH
Q 025702          124 DPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (249)
Q Consensus       124 ~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (249)
                      .....| .+|...+.+.+       ..+++++.++||.+..+...   .............             ..++.+
T Consensus       183 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-------------~~p~~p  249 (287)
T 3rku_A          183 PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD-------------TTPLMA  249 (287)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT-------------SCCEEH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc-------------cCCCCH
Confidence            233446 99988887653       35899999999999887310   0000001111111             112379


Q ss_pred             HHHHHHHHHHhcCCCC--CCceEEecCCccc
Q 025702          193 KDLARAFVQVLGNEKA--SRQVFNISGEKYV  221 (249)
Q Consensus       193 ~D~a~~~~~~~~~~~~--~~~~~~i~~~~~~  221 (249)
                      +|+|++++++++.+..  .++.+.+.+++..
T Consensus       250 edvA~~v~~l~s~~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          250 DDVADLIVYATSRKQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             HHHHHHHHHHHTSCTTEEEEEEEEEETTEEE
T ss_pred             HHHHHHHHHHhCCCCCeEecceEEeeCCCCC
Confidence            9999999999987643  4778888887753

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.62  E-value=2.3e-15  Score=116.19  Aligned_cols=181  Identities=17%  Similarity=0.136  Sum_probs=118.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|++......     ...+.....++.++.+|++|++++.++++..     ++|+
T Consensus        13 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   87 (247)
T 2jah_A           13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRAL-----GDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDI   87 (247)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986442110     0111112357889999999999888877632     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||++|...                    .+...++++    +.  + .++|++||...+..           ..+...|
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~~~~~Y  155 (247)
T 2jah_A           88 LVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN-----------VRNAAVY  155 (247)
T ss_dssp             EEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-----------CTTCHHH
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-----------CCCCcHH
Confidence            999998521                    122233333    22  4 79999999776421           1223346


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.       ...+++++.++||.+.++................     .++    ...+.+++|+|+++++
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-----~~~----~~~~~~pedvA~~v~~  226 (247)
T 2jah_A          156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQ-----RIS----QIRKLQAQDIAEAVRY  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHH-----HTT----TSCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHh-----ccc----ccCCCCHHHHHHHHHH
Confidence             8898777654       2458999999999998874211000111111110     011    0115789999999999


Q ss_pred             HhcCCC
Q 025702          202 VLGNEK  207 (249)
Q Consensus       202 ~~~~~~  207 (249)
                      ++..+.
T Consensus       227 l~s~~~  232 (247)
T 2jah_A          227 AVTAPH  232 (247)
T ss_dssp             HHHSCT
T ss_pred             HhCCCc
Confidence            998753

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.62  E-value=3.2e-16  Score=123.26  Aligned_cols=193  Identities=16%  Similarity=0.154  Sum_probs=128.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|.||++++++|+++|++|++++|+......        .......++.++.+|++|.+++.++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A           11 TGGASGLGRALVDRFVAEGARVAVLDKSAERLRE--------LEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHH--------HHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654211        11112467899999999999888877643     7899


Q ss_pred             EEecCCCCh-------------------------hhhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA-------------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        76 Vi~~~~~~~-------------------------~~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +||+||...                         .+...++++    +. +..++|++||...+..           ...
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~  151 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP-----------NGG  151 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS-----------SSS
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC-----------CCC
Confidence            999998521                         012223333    22 3469999999776421           122


Q ss_pred             CCcc-cchHHHHHHHhh------cCCcEEEeecceeeCCCCCcc---hHH------HHHHHHHcCCCeeecCCCcceEee
Q 025702          126 KSRH-KGKLNTESVLES------KGVNWTSLRPVYIYGPLNYNP---VEE------WFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~~------~~~~~~~~r~~~v~g~~~~~~---~~~------~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      ...| .+|...+.+.+.      ..++++.+.||.+..+.....   ...      ..........++         ..+
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~  222 (281)
T 3zv4_A          152 GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI---------GRM  222 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT---------SSC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC---------CCC
Confidence            3346 999888876531      238999999999988742110   000      011222222221         235


Q ss_pred             eeHHHHHHHHHHHhcCCC---CCCceEEecCCccc
Q 025702          190 GHVKDLARAFVQVLGNEK---ASRQVFNISGEKYV  221 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~---~~~~~~~i~~~~~~  221 (249)
                      ..++|+|+++++++..+.   ..|+.+++.+|..+
T Consensus       223 ~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          223 PALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             CCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             CCHHHHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence            668999999999998432   46899999998754

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.62  E-value=4.6e-15  Score=117.23  Aligned_cols=194  Identities=11%  Similarity=0.049  Sum_probs=129.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEe-cCCCccccCCCCCCchhhh-hccCceEEEEeccCCHH----------------
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKDYD----------------   62 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d~~----------------   62 (249)
                      |||+|.||+++++.|+++|++|++++ |+.......     ...+. ....++.++.+|++|.+                
T Consensus        15 TGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   89 (291)
T 1e7w_A           15 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL-----SATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   89 (291)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-----HHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             ECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH-----HHHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence            79999999999999999999999999 875432110     01111 11357889999999988                


Q ss_pred             -HHHHhhhhC-----CCcEEEecCCCCh-----------------------hh-----------hHHHHHh----CC--C
Q 025702           63 -FVKSSLSAK-----GFDVVYDINGREA-----------------------DE-----------VEPILDA----LP--N   96 (249)
Q Consensus        63 -~l~~~~~~~-----~~d~Vi~~~~~~~-----------------------~~-----------~~~~~~a----~~--~   96 (249)
                       ++.++++..     ++|++||+||...                       ..           ...++++    +.  +
T Consensus        90 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~  169 (291)
T 1e7w_A           90 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  169 (291)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence             888777643     7999999998531                       11           1122222    22  3


Q ss_pred             ------CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc
Q 025702           97 ------LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP  162 (249)
Q Consensus        97 ------~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~  162 (249)
                            ..++|++||...+..           ......| .+|...+.+.+       ..+++++.++||.+..+. .  
T Consensus       170 ~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--  235 (291)
T 1e7w_A          170 AKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--  235 (291)
T ss_dssp             GGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--
T ss_pred             CCCCCCCcEEEEEechhhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--
Confidence                  578999999776421           1233456 89988776652       357999999999997774 2  


Q ss_pred             hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ..+..........++   +.     .+..++|+|+++++++...  ...|+.+++.+|..+
T Consensus       236 ~~~~~~~~~~~~~p~---~~-----r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          236 MPPAVWEGHRSKVPL---YQ-----RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             SCHHHHHHHHTTCTT---TT-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHhhCCC---CC-----CCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            112222333222221   10     2567899999999999753  236888999888654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.62  E-value=1.1e-14  Score=113.93  Aligned_cols=191  Identities=14%  Similarity=0.098  Sum_probs=121.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||+|+||++++++|+++|++|++++|++.......     ..+.. ..++.++.+|++|.+++.++++..     ++|+
T Consensus        27 TGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~-----~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           27 TGATSGFGEACARRFAEAGWSLVLTGRREERLQALA-----GELSA-KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             SSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTT-TSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHhhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865421100     01110 136889999999999999888742     5799


Q ss_pred             EEecCCCChh---------------------h----hHHHHHhCC--CCC-eEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD---------------------E----VEPILDALP--NLE-QFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~----~~~~~~a~~--~~~-~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||++|....                     +    ++.++..++  +.. ++|++||...+..           ..+..
T Consensus       101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-----------~~~~~  169 (272)
T 2nwq_A          101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-----------YPGSH  169 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-----------CCCCc
Confidence            9999985321                     1    222344443  556 9999999876421           12233


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++.++||.+.++........    .  .........    ...++.++|+|+++
T Consensus       170 ~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~----~--~~~~~~~~~----~~~~~~pedvA~~v  239 (272)
T 2nwq_A          170 VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGG----D--QARYDKTYA----GAHPIQPEDIAETI  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccccc----c--hHHHHHhhc----cCCCCCHHHHHHHH
Confidence            46 99998887763       2578999999999988742110000    0  000000000    01246899999999


Q ss_pred             HHHhcCCCC-CCceEEecCC
Q 025702          200 VQVLGNEKA-SRQVFNISGE  218 (249)
Q Consensus       200 ~~~~~~~~~-~~~~~~i~~~  218 (249)
                      ++++..+.. .++.+.+.++
T Consensus       240 ~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          240 FWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HHHHTSCTTEEEEEEEEEET
T ss_pred             HHHhCCCccCccceEEEeec
Confidence            999986532 4556666554

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.61  E-value=2.4e-15  Score=114.84  Aligned_cols=170  Identities=14%  Similarity=0.075  Sum_probs=113.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC--CCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--GFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--~~d~Vi~   78 (249)
                      |||+|.||+++++.|+++|++|++++|++......        ..+....+.++.+|++|.++++++++..  .+|+|||
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTV--------TNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH--------HHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            79999999999999999999999999987553211        1111357889999999999999988732  3499999


Q ss_pred             cCCCCh--------------------hhhHHHHH----hCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           79 INGREA--------------------DEVEPILD----ALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        79 ~~~~~~--------------------~~~~~~~~----a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      ++|...                    .+...+++    .+. ...++|++||...+..           ..+...| .+|
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~asK  147 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-----------KAQESTYCAVK  147 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-----------CTTCHHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-----------CCCCchhHHHH
Confidence            998531                    12223333    333 2349999999877522           2233456 999


Q ss_pred             HHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       133 ~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      ...+.+.+       ..+++++.++||.+..+...         ....         ......+.+++|+|++++.++..
T Consensus       148 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~~~---------~~~~~~~~~~~dvA~~i~~l~~~  209 (230)
T 3guy_A          148 WAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE---------TSGK---------SLDTSSFMSAEDAALMIHGALAN  209 (230)
T ss_dssp             HHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCE
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH---------hcCC---------CCCcccCCCHHHHHHHHHHHHhC
Confidence            88887653       34799999999998776311         1001         01124578899999999999876


Q ss_pred             CC
Q 025702          206 EK  207 (249)
Q Consensus       206 ~~  207 (249)
                      +.
T Consensus       210 ~~  211 (230)
T 3guy_A          210 IG  211 (230)
T ss_dssp             ET
T ss_pred             cC
Confidence            54

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.61  E-value=4.8e-15  Score=116.49  Aligned_cols=181  Identities=13%  Similarity=0.115  Sum_probs=119.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.. ....+.++.+|++|.++++++++..     ++|
T Consensus        39 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  113 (281)
T 4dry_A           39 TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAA-----GEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLD  113 (281)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421110     11111 1223589999999999988888643     789


Q ss_pred             EEEecCCCChh---------------------h----hHHHHHhCC--C--CCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           75 VVYDINGREAD---------------------E----VEPILDALP--N--LEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        75 ~Vi~~~~~~~~---------------------~----~~~~~~a~~--~--~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      ++||+||....                     +    ++.++..+.  +  ..++|++||...+.           +..+
T Consensus       114 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------~~~~  182 (281)
T 4dry_A          114 LLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT-----------PRPN  182 (281)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC-----------CCTT
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC-----------CCCC
Confidence            99999986311                     1    222333333  2  46999999977642           1223


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ...| .+|...+.+.+       ..+++++.++||.+..+..         ......  ............++.++|+|+
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~---------~~~~~~--~~~~~~~~~~~~~~~pedvA~  251 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT---------ARMSTG--VLQANGEVAAEPTIPIEHIAE  251 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------CE--EECTTSCEEECCCBCHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh---------hhhcch--hhhhhhcccccCCCCHHHHHH
Confidence            4456 99988877653       3689999999999987731         111110  000011112234778999999


Q ss_pred             HHHHHhcCCCC
Q 025702          198 AFVQVLGNEKA  208 (249)
Q Consensus       198 ~~~~~~~~~~~  208 (249)
                      +++++++++..
T Consensus       252 ~v~fL~s~~~~  262 (281)
T 4dry_A          252 AVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHSCTT
T ss_pred             HHHHHhCCCcc
Confidence            99999998764

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.60  E-value=2.3e-14  Score=110.09  Aligned_cols=195  Identities=14%  Similarity=0.110  Sum_probs=131.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|.++|.+|++++|+.+...+     ...++.....++..+.+|++|+++++++++..     ++|+
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~-----~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   87 (254)
T 4fn4_A           13 TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQ-----IVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDV   87 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----HHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH-----HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655221     11223333567899999999999988877642     7999


Q ss_pred             EEecCCCChh-------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~-------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+||....                         .++.++..+.  +..++|++||...+-.           ......
T Consensus        88 LVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~-----------~~~~~~  156 (254)
T 4fn4_A           88 LCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG-----------GFAGAP  156 (254)
T ss_dssp             EEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS-----------SSSCHH
T ss_pred             EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC-----------CCCChH
Confidence            9999985210                         1333444443  5679999999776311           112234


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcch--HHHHHHHH-HcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV--EEWFFHRL-KAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|.....+.       ...++++..+.||.+-.|......  ........ ....++.         -+..++|+|+
T Consensus       157 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~---------R~g~pediA~  227 (254)
T 4fn4_A          157 YTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSS---------RLAEPEDIAN  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCC---------CCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCC---------CCcCHHHHHH
Confidence            6 8898777654       246899999999999877421111  01111111 1111111         2345899999


Q ss_pred             HHHHHhcCCC--CCCceEEecCCcc
Q 025702          198 AFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       198 ~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      ++++++....  -.|+.+.+.+|-+
T Consensus       228 ~v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          228 VIVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCchhcCCcCCEEEeCCCcc
Confidence            9999997543  3689999988764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.60  E-value=8.3e-16  Score=118.52  Aligned_cols=180  Identities=16%  Similarity=0.149  Sum_probs=107.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHH---HHhhhhC-CCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV---KSSLSAK-GFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l---~~~~~~~-~~d~V   76 (249)
                      |||+|+||+++++.|.+ |+.|++++|++.......         + ..++.++.+|+.+.+..   .+.++.. ++|++
T Consensus        11 TGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~---------~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A           11 TGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA---------E-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             ESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH---------T-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             EcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH---------h-hcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence            79999999999999988 999999999865532111         1 24688999999887542   2222222 79999


Q ss_pred             EecCCCChh--------------------h----hHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           77 YDINGREAD--------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        77 i~~~~~~~~--------------------~----~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      ||++|....                    +    ++.++..++ ...++|++||...+..           ..+...| .
T Consensus        80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a  148 (245)
T 3e9n_A           80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGP-----------HPGNTIYAA  148 (245)
T ss_dssp             EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------CHHHHH
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccC-----------CCCchHHHH
Confidence            999986311                    1    222333333 3479999999877532           1223446 9


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|...+.+.+       ..+++++.++||.+.++....     +......         ......+++++|+|+++++++
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~~~---------~~~~~~~~~p~dvA~~i~~l~  214 (245)
T 3e9n_A          149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-----LMDSQGT---------NFRPEIYIEPKEIANAIRFVI  214 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-----hhhhhhc---------ccccccCCCHHHHHHHHHHHH
Confidence            9998887653       357999999999998874211     1100000         011134678999999999999


Q ss_pred             cCCCCCCceEEecC
Q 025702          204 GNEKASRQVFNISG  217 (249)
Q Consensus       204 ~~~~~~~~~~~i~~  217 (249)
                      +.+. .+.++++.-
T Consensus       215 ~~~~-~~~~~~i~~  227 (245)
T 3e9n_A          215 DAGE-TTQITNVDV  227 (245)
T ss_dssp             TSCT-TEEEEEEEE
T ss_pred             cCCC-ccceeeeEE
Confidence            8876 356776643

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.58  E-value=1.3e-14  Score=112.07  Aligned_cols=173  Identities=16%  Similarity=0.177  Sum_probs=116.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh---ccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|.||+++++.|+++|++|++++|+........     ..+..   ...++.++.+|++|.+++.++++..     +
T Consensus        13 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (250)
T 3nyw_A           13 TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVH-----DEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA   87 (250)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHH-----HHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999999875522110     01111   1257889999999999888887642     7


Q ss_pred             CcEEEecCCCCh-------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA-------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        73 ~d~Vi~~~~~~~-------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +|++||+||...                   .+...++++    ++  +..++|++||...+..           ..+..
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~  156 (250)
T 3nyw_A           88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-----------FADGG  156 (250)
T ss_dssp             EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------CCTT
T ss_pred             CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-----------CCCCc
Confidence            999999998631                   112233333    33  5679999999765311           12344


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      .| .+|...+.+.+       ..+++++.++||.+..+.         .....  ...       ....+++++|+|+++
T Consensus       157 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~---------~~~~~--~~~-------~~~~~~~p~dva~~v  218 (250)
T 3nyw_A          157 IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM---------AKKAG--TPF-------KDEEMIQPDDLLNTI  218 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH---------HHHTT--CCS-------CGGGSBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch---------hhhcC--CCc-------ccccCCCHHHHHHHH
Confidence            56 99988776653       358999999999987651         11111  111       122478899999999


Q ss_pred             HHHhcCCC
Q 025702          200 VQVLGNEK  207 (249)
Q Consensus       200 ~~~~~~~~  207 (249)
                      +++++.+.
T Consensus       219 ~~l~s~~~  226 (250)
T 3nyw_A          219 RCLLNLSE  226 (250)
T ss_dssp             HHHHTSCT
T ss_pred             HHHHcCCC
Confidence            99998764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.57  E-value=2.9e-14  Score=110.46  Aligned_cols=192  Identities=15%  Similarity=0.115  Sum_probs=118.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHH-Hhhhh-CCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVK-SSLSA-KGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~-~~~~~-~~~d~Vi~   78 (249)
                      |||+|+||+++++.|+++|++|++++|+.......      ..+......+..+  |..+.+.+. ++.+. .++|++||
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH------HHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            79999999999999999999999999986542110      0011112234333  554433322 22221 27999999


Q ss_pred             cCCCC-hh--------------------hhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           79 INGRE-AD--------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        79 ~~~~~-~~--------------------~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||.. ..                    +...++++    ++  +..++|++||...+..           ..+...| .
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~  147 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------WKELSTYTS  147 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------CTTCHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC-----------CCCchHHHH
Confidence            99864 10                    12223333    32  5679999999776421           1223346 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHH-------HHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEE-------WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      +|...+.+.+       ..+++++.++||.++|+........       ..........+.         ..+.+++|+|
T Consensus       148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~---------~~~~~p~dvA  218 (254)
T 1zmt_A          148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL---------QRLGTQKELG  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS---------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC---------CCCcCHHHHH
Confidence            9988877653       3589999999999988753211101       111111111111         1356799999


Q ss_pred             HHHHHHhcCCC--CCCceEEecCCcc
Q 025702          197 RAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      +++++++..+.  ..|+.+++.+|..
T Consensus       219 ~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          219 ELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHhCcccCCccCCEEEECCCch
Confidence            99999997643  3688999988754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.57  E-value=6e-14  Score=113.22  Aligned_cols=190  Identities=15%  Similarity=0.136  Sum_probs=125.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCC---chhhhhccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|.||+++++.|+++|++|++++|+..+... +....   ...+......+.++.+|++|++++.++++..     +
T Consensus        51 TGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~-l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  129 (346)
T 3kvo_A           51 TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPK-LLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGG  129 (346)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSS-SCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             eCCChHHHHHHHHHHHHCCCEEEEEECChhhhhh-hHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999999876322 11111   1222333467899999999999988888743     8


Q ss_pred             CcEEEecCCCC--------------------hhhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGRE--------------------ADEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        73 ~d~Vi~~~~~~--------------------~~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +|+|||+||..                    ..+...++++    ++  +..++|++||...+...         ...+.
T Consensus       130 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~---------~~~~~  200 (346)
T 3kvo_A          130 IDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV---------WFKQH  200 (346)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---------GTSSS
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---------CCCCc
Confidence            99999999852                    1223334444    33  45799999997764221         11233


Q ss_pred             Ccc-cchHHHHHHHh----h--cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          127 SRH-KGKLNTESVLE----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~----~--~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      ..| .+|...+.+.+    +  .+++++.+.|+.+....        +...+....         ....+..++|+|+++
T Consensus       201 ~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~--------~~~~~~~~~---------~~~r~~~pedvA~~v  263 (346)
T 3kvo_A          201 CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA--------AMDMLGGPG---------IESQCRKVDIIADAA  263 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--------HHHHHCC-----------CGGGCBCTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--------HHHhhcccc---------ccccCCCHHHHHHHH
Confidence            446 89988776653    2  57899999999643321        111111111         112356789999999


Q ss_pred             HHHhcCCC-CCCceEEecCC
Q 025702          200 VQVLGNEK-ASRQVFNISGE  218 (249)
Q Consensus       200 ~~~~~~~~-~~~~~~~i~~~  218 (249)
                      ++++.... ..|+.+ +.++
T Consensus       264 ~~L~s~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          264 YSIFQKPKSFTGNFV-IDEN  282 (346)
T ss_dssp             HHHHTSCTTCCSCEE-EHHH
T ss_pred             HHHHhcCCCCCceEE-ECCc
Confidence            99998732 245554 5443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.57  E-value=2.6e-14  Score=110.90  Aligned_cols=192  Identities=17%  Similarity=0.172  Sum_probs=129.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|.++|++|++.+|+.+...+        ...+...++..+.+|++|+++++++++..     ++|+
T Consensus        35 TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~--------~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           35 TGATSGIGLAAAKRFVAEGARVFITGRRKDVLDA--------AIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998655221        22233567889999999999888887642     7999


Q ss_pred             EEecCCCCh--------------------hhhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREA--------------------DEVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||+||...                    .+...+.++    +++..++|++||...+..           ......| .
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~-----------~~~~~~Y~a  175 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG-----------TPAFSVYAA  175 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC-----------CTTCHHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC-----------CCCchHHHH
Confidence            999998631                    122223333    334568999998765311           1122346 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc------hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP------VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      +|.....+.+       ..++++..+.||.+..|.....      ....+...+.+..++..         +..++|+|+
T Consensus       176 sKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~  246 (273)
T 4fgs_A          176 SKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR---------VGRAEEVAA  246 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS---------CBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC---------CcCHHHHHH
Confidence            9988776643       4679999999999987642111      11223333444444322         344899999


Q ss_pred             HHHHHhcCC--CCCCceEEecCCcc
Q 025702          198 AFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++++++...  --.|+.+.+.+|..
T Consensus       247 ~v~FLaSd~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          247 AALFLASDDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHhCchhcCccCCeEeECcChh
Confidence            999999754  33688999988753

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.57  E-value=2.2e-14  Score=112.37  Aligned_cols=184  Identities=19%  Similarity=0.180  Sum_probs=120.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCc---hhhhhccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD---QEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||+|.||+++++.|+++|++|++++|+..+... +....+   ..+.....++.++.+|++|.+++.++++..     +
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   90 (274)
T 3e03_A           12 TGASRGIGLAIALRAARDGANVAIAAKSAVANPK-LPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGG   90 (274)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTT-SCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeccchhhhh-hHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999999765322 111111   122223567899999999999988887643     7


Q ss_pred             CcEEEecCCCCh--------------------hhhHH----HHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA--------------------DEVEP----ILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        73 ~d~Vi~~~~~~~--------------------~~~~~----~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +|++||+||...                    .+...    ++..++  +..++|++||...+...         ...+.
T Consensus        91 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~  161 (274)
T 3e03_A           91 IDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA---------WWGAH  161 (274)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH---------HHHHC
T ss_pred             CCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC---------CCCCC
Confidence            999999998621                    12222    333333  45799999997654210         01122


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecce-eeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVY-IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~-v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ..| .+|...+.+.+       ..+++++.+.||. +-.+..         .. ....         ....+..++|+|+
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~---------~~-~~~~---------~~~~~~~pedvA~  222 (274)
T 3e03_A          162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI---------NM-LPGV---------DAAACRRPEIMAD  222 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------CC---------CGGGSBCTHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh---------hh-cccc---------cccccCCHHHHHH
Confidence            346 89988877653       3579999999995 433310         00 0111         1112567999999


Q ss_pred             HHHHHhcCCCC--CCceE
Q 025702          198 AFVQVLGNEKA--SRQVF  213 (249)
Q Consensus       198 ~~~~~~~~~~~--~~~~~  213 (249)
                      ++++++.....  .|+.+
T Consensus       223 ~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          223 AAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHHTSCCTTCCSCEE
T ss_pred             HHHHHhCccccccCCeEE
Confidence            99999976432  45555

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.57  E-value=3.3e-14  Score=119.69  Aligned_cols=197  Identities=17%  Similarity=0.142  Sum_probs=129.9

Q ss_pred             CCCcccchHHHHHHHHHcCCe-EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----~~d~   75 (249)
                      |||+|+||.++++.|.++|++ |++++|+...... . ......+...+.++.++.+|++|.+++.++++..    .+|.
T Consensus       232 TGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~-~-~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~  309 (486)
T 2fr1_A          232 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG-A-GELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA  309 (486)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT-H-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHH-H-HHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcE
Confidence            799999999999999999985 9999998643110 0 0001122223457899999999999999998743    4699


Q ss_pred             EEecCCCC--------------------hhhhHHHHHhCC--CCCeEEEeecccc-ccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           76 VYDINGRE--------------------ADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        76 Vi~~~~~~--------------------~~~~~~~~~a~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      |||++|..                    +.++.++.+++.  +..+||++||... +|..            ....| .+
T Consensus       310 VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~------------g~~~Yaaa  377 (486)
T 2fr1_A          310 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP------------GLGGYAPG  377 (486)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT------------TCTTTHHH
T ss_pred             EEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC------------CCHHHHHH
Confidence            99999852                    234566777766  6789999999654 3321            12335 88


Q ss_pred             hHHHHHHH---hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          132 KLNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       132 k~~~e~~~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      |...+.+.   +..++++++++||.+.+++.....       . . ..+   .  .....+++.+|+++++..++..+..
T Consensus       378 ka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~-------~-~-~~~---~--~~g~~~i~~e~~a~~l~~~l~~~~~  443 (486)
T 2fr1_A          378 NAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP-------V-A-DRF---R--RHGVIEMPPETACRALQNALDRAEV  443 (486)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECCBC---------------------C---T--TTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchh-------H-H-HHH---H--hcCCCCCCHHHHHHHHHHHHhCCCC
Confidence            88777654   456899999999998876421110       0 0 001   1  1224689999999999999987653


Q ss_pred             CCceEEecCCccccHHHHHHHHH
Q 025702          209 SRQVFNISGEKYVTFDGLARACA  231 (249)
Q Consensus       209 ~~~~~~i~~~~~~s~~~l~~~~~  231 (249)
                         .+.+..   +.|..+...+.
T Consensus       444 ---~~~v~~---~d~~~~~~~~~  460 (486)
T 2fr1_A          444 ---CPIVID---VRWDRFLLAYT  460 (486)
T ss_dssp             ---SCEECE---ECHHHHHHHHT
T ss_pred             ---eEEEEe---CCHHHHhhhhc
Confidence               222322   56777665544

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.57  E-value=9.8e-15  Score=113.48  Aligned_cols=185  Identities=16%  Similarity=0.083  Sum_probs=115.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh------CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~------~~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++|++......     ...+.....++.++.+|++|.+++.++++.      -++|
T Consensus        11 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   85 (260)
T 2qq5_A           11 TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVV-----AQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLD   85 (260)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence            79999999999999999999999999986542110     011111235788999999999888877653      2689


Q ss_pred             EEEecCCCCh---------------------------hhh----HHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCC
Q 025702           75 VVYDINGREA---------------------------DEV----EPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD  121 (249)
Q Consensus        75 ~Vi~~~~~~~---------------------------~~~----~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (249)
                      ++||++|...                           .+.    +.++..+.  +..++|++||...+..          
T Consensus        86 ~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  155 (260)
T 2qq5_A           86 VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY----------  155 (260)
T ss_dssp             EEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC----------
T ss_pred             EEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC----------
Confidence            9999994210                           011    22333333  5679999999876521          


Q ss_pred             CCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                        .+...| .+|...+.+.+       ..++++++++||.+..+.........   .............  ....+..++
T Consensus       156 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~pe  228 (260)
T 2qq5_A          156 --MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE---EVLQDPVLKQFKS--AFSSAETTE  228 (260)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc---cccchhHHHHHHh--hhccCCCHH
Confidence              123456 89988887653       35899999999999887521111000   0000000000000  011135789


Q ss_pred             HHHHHHHHHhcCCC
Q 025702          194 DLARAFVQVLGNEK  207 (249)
Q Consensus       194 D~a~~~~~~~~~~~  207 (249)
                      |+|+++++++..+.
T Consensus       229 ~va~~v~~l~s~~~  242 (260)
T 2qq5_A          229 LSGKCVVALATDPN  242 (260)
T ss_dssp             HHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHhcCcc
Confidence            99999999998753

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.57  E-value=1.4e-13  Score=106.60  Aligned_cols=185  Identities=15%  Similarity=0.161  Sum_probs=123.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|.++|++|++..|+..+.               ......+.+|++|++++.++++.     -++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           17 TAGTKGAGAATVSLFLELGAQVLTTARARPEG---------------LPEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             SCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             eccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999976542               12334678999999888877753     26999


Q ss_pred             EEecCCCCh----------------------hh----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREA----------------------DE----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~----------------------~~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||++|...                      .+    ++.++..++  +..++|++||...+-.          .+....
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~----------~~~~~~  151 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP----------LPESTT  151 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CTTTCH
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC----------CCCccH
Confidence            999987421                      01    233444443  5679999998765311          111234


Q ss_pred             cc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchH--------------HHHHHHHHcCCCeeecCCCcc
Q 025702          128 RH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVE--------------EWFFHRLKAGRPIPIPGSGIQ  185 (249)
Q Consensus       128 ~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~  185 (249)
                      +| .+|...+.+.       ...+++++.+.||.+-.+... ...              ...........++        
T Consensus       152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--------  222 (261)
T 4h15_A          152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASV-RLAERLAKQAGTDLEGGKKIIMDGLGGIPL--------  222 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH-HHHHHHHHHTTCCHHHHHHHHHHHTTCCTT--------
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchh-hhhHHHHHhhccchhhHHHHHHHHhcCCCC--------
Confidence            56 8898877654       246899999999998765210 000              0111111112222        


Q ss_pred             eEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                       .-+..++|+|+++++++...  .-.|+.+.+.+|-.
T Consensus       223 -gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          223 -GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             -CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence             12456899999999998653  23688999988753

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.57  E-value=2.5e-14  Score=109.03  Aligned_cols=192  Identities=18%  Similarity=0.135  Sum_probs=131.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||++-||+++++.|.++|.+|++.+|+..+.       ....+.+...++..+.+|++|+++++++++.-++|++||+|
T Consensus        15 TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~-------~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A           15 TGANTGLGQAIAVGLAAAGAEVVCAARRAPDE-------TLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCCHH-------HHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             eCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHH-------HHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            79999999999999999999999999975431       11223333567899999999999998888877899999999


Q ss_pred             CCChh--------------------h----hHHHHHhCC---CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           81 GREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        81 ~~~~~--------------------~----~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      |....                    +    ++.++..+.   +..++|++||...+..           ......| .+|
T Consensus        88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g-----------~~~~~~Y~asK  156 (247)
T 4hp8_A           88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG-----------GIRVPSYTAAK  156 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CSSCHHHHHHH
T ss_pred             CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC-----------CCCChHHHHHH
Confidence            86321                    1    333444442   3579999999776311           1122346 889


Q ss_pred             HHHHHHH-------hhcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          133 LNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       133 ~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      .....+.       ...++++..+.||.+-.|...... .+.....+.+..++..         +-.++|+|.+++++++
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaS  227 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGR---------WGHSEDIAGAAVFLSS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS---------CBCTHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC---------CcCHHHHHHHHHHHhC
Confidence            8777654       246899999999999776311000 0112233334433322         3447999999999987


Q ss_pred             CCC--CCCceEEecCCc
Q 025702          205 NEK--ASRQVFNISGEK  219 (249)
Q Consensus       205 ~~~--~~~~~~~i~~~~  219 (249)
                      ...  ..|+.+.+.+|.
T Consensus       228 d~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          228 AAADYVHGAILNVDGGW  244 (247)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             chhcCCcCCeEEECccc
Confidence            543  368899988874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.57  E-value=1.5e-13  Score=106.48  Aligned_cols=194  Identities=10%  Similarity=0.068  Sum_probs=129.3

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhh-----CC
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSA-----KG   72 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~-----~~   72 (249)
                      |||+|  -||.++++.|.++|++|++..|+.....+.     ...+.+. ..++.++.+|++|++++.++++.     -+
T Consensus        12 TGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (256)
T 4fs3_A           12 MGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKEL-----EKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGN   86 (256)
T ss_dssp             ECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHH-----HHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            68776  699999999999999999999986552211     1111221 34788999999999988877753     27


Q ss_pred             CcEEEecCCCChh-------------hh---------------HHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREAD-------------EV---------------EPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        73 ~d~Vi~~~~~~~~-------------~~---------------~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      +|++||+++....             .+               +.....+++..++|++||....-           +..
T Consensus        87 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~-----------~~~  155 (256)
T 4fs3_A           87 IDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF-----------AVQ  155 (256)
T ss_dssp             CSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS-----------CCT
T ss_pred             CCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc-----------Ccc
Confidence            9999999885210             00               11111122456899999976531           112


Q ss_pred             CCCcc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ....| .+|...+.+.       ...+++++.+.||.+-.+.... ...+.....+.+..++..         +..++|+
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R---------~g~peev  226 (256)
T 4fs3_A          156 NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR---------NVDQVEV  226 (256)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS---------CCCHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC---------CcCHHHH
Confidence            23346 8898777654       2468999999999998764221 223344455555444422         3448999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCc
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      |++++++++..  -..|+.+.+.+|-
T Consensus       227 A~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          227 GKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCH
Confidence            99999999753  2368899998875

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.56  E-value=1.3e-13  Score=116.64  Aligned_cols=198  Identities=18%  Similarity=0.187  Sum_probs=133.0

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||+|+||.++++.|.++|+ +|++++|+...... . ......+...+.++.++.+|++|.+++.++++...+|+|||+
T Consensus       265 TGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~-~-~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~  342 (511)
T 2z5l_A          265 TGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPG-A-AELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHT  342 (511)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT-H-HHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHH-H-HHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEEC
Confidence            79999999999999999998 58888998643110 0 000011222245789999999999999999985569999999


Q ss_pred             CCCC--------------------hhhhHHHHHhCC---CCCeEEEeecccc-ccCCCCCCCCCCCCCCCCCcc-cchHH
Q 025702           80 NGRE--------------------ADEVEPILDALP---NLEQFIYCSSAGV-YLKSDLLPHCETDTVDPKSRH-KGKLN  134 (249)
Q Consensus        80 ~~~~--------------------~~~~~~~~~a~~---~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~-~~k~~  134 (249)
                      +|..                    ..++.++.+++.   +..+||++||... +|..            ....| .+|..
T Consensus       343 AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~------------g~~~YaaaKa~  410 (511)
T 2z5l_A          343 AGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA------------GQGAYAAANAA  410 (511)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT------------TBHHHHHHHHH
T ss_pred             CcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC------------CCHHHHHHHHH
Confidence            9863                    223556777765   4679999999754 3321            22346 88988


Q ss_pred             HHHHH---hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCc
Q 025702          135 TESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (249)
Q Consensus       135 ~e~~~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (249)
                      .+.+.   +..++++++++||.+-+.+.......   ..+..           ....+++.+|+++++..++..+..   
T Consensus       411 ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~---~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~~---  473 (511)
T 2z5l_A          411 LDALAERRRAAGLPATSVAWGLWGGGGMAAGAGE---ESLSR-----------RGLRAMDPDAAVDALLGAMGRNDV---  473 (511)
T ss_dssp             HHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHH---HHHHH-----------HTBCCBCHHHHHHHHHHHHHHTCS---
T ss_pred             HHHHHHHHHHcCCcEEEEECCcccCCcccccccH---HHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC---
Confidence            88776   35689999999998744332222211   11110           113468899999999999987653   


Q ss_pred             eEEecCCccccHHHHHHHHHH
Q 025702          212 VFNISGEKYVTFDGLARACAK  232 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~  232 (249)
                      .+.+..   +.|..+...+..
T Consensus       474 ~v~v~~---~d~~~~~~~~~~  491 (511)
T 2z5l_A          474 CVTVVD---VDWERFAPATNA  491 (511)
T ss_dssp             EEEECC---BCHHHHHHHHHH
T ss_pred             EEEEEe---CCHHHHHhhhcc
Confidence            333433   567777666543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.56  E-value=4.6e-14  Score=110.23  Aligned_cols=193  Identities=15%  Similarity=0.096  Sum_probs=124.7

Q ss_pred             CCC--cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-------
Q 025702            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-------   71 (249)
Q Consensus         1 ~G~--tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-------   71 (249)
                      |||  +|.||+++++.|+++|++|++++|+.......+.       .+...++.++.+|++|+++++++++..       
T Consensus        13 TGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A           13 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT-------DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             CCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH-------TTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH-------HhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            788  9999999999999999999999998644111000       011346788999999999998888743       


Q ss_pred             -CCcEEEecCCCChh-------------------------hhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCC
Q 025702           72 -GFDVVYDINGREAD-------------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETD  121 (249)
Q Consensus        72 -~~d~Vi~~~~~~~~-------------------------~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~  121 (249)
                       ++|++||++|....                         +...+++++    ++..++|++||...++           
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------  154 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-----------  154 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-----------
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-----------
Confidence             79999999985320                         122234442    2235899999865421           


Q ss_pred             CCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-------chH----HHHHHHHHcCCCeeecCC
Q 025702          122 TVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-------PVE----EWFFHRLKAGRPIPIPGS  182 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-------~~~----~~~~~~~~~~~~~~~~~~  182 (249)
                       ......| .+|...+.+.+       ..+++++.++||.+..+....       ...    ..+........++   + 
T Consensus       155 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~-  229 (269)
T 2h7i_A          155 -MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---G-  229 (269)
T ss_dssp             -CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---C-
T ss_pred             -cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc---c-
Confidence             1223346 88988877653       358999999999987652100       000    0011111111111   0 


Q ss_pred             CcceEeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          183 GIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       183 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                          +.+..++|+|+++++++....  ..|+.+.+.+|..
T Consensus       230 ----rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          230 ----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             ----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             ----cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence                024567999999999997532  3688898888754

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.56  E-value=5.5e-15  Score=113.68  Aligned_cols=194  Identities=14%  Similarity=0.129  Sum_probs=131.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|.++|++|++.+|+.+...+.     ...+.....++..+.+|++|+++++++++..     ++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~-----~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   89 (255)
T 4g81_D           15 TGSARGLGFAYAEGLAAAGARVILNDIRATLLAES-----VDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDI   89 (255)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHH-----HHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            79999999999999999999999999986542211     1122223467889999999999888777642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC---CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+||....                    +    ++.++..+.   +..++|++||...+..           ......
T Consensus        90 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~-----------~~~~~~  158 (255)
T 4g81_D           90 LINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA-----------RPTVAP  158 (255)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB-----------CTTCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC-----------CCCchh
Confidence            9999986321                    1    333444442   4579999999776421           112234


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|.....+.       ...++++..+.||.+..|...... ...+...+.+..++.         -+..++|+|+++
T Consensus       159 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~pediA~~v  229 (255)
T 4g81_D          159 YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQ---------RWGRPEELIGTA  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTC---------SCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCC---------CCcCHHHHHHHH
Confidence            6 8898777654       246899999999999877421100 012222333333332         234579999999


Q ss_pred             HHHhcCC--CCCCceEEecCCc
Q 025702          200 VQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++++...  -..|+.+.+.+|-
T Consensus       230 ~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          230 IFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhCCCcCCEEEECCCe
Confidence            9998653  3378899998874

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.56  E-value=2.4e-14  Score=112.82  Aligned_cols=173  Identities=16%  Similarity=0.120  Sum_probs=116.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|+||+++++.|+++|++|++++|++.......     ..+... ...+.++.+|++|.+++.++++..     ++|
T Consensus        34 TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  108 (286)
T 1xu9_A           34 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV-----SHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD  108 (286)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999865421100     011111 236889999999998888877632     799


Q ss_pred             EEEec-CCCCh-------------------hhhHHHHHh----CC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           75 VVYDI-NGREA-------------------DEVEPILDA----LP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        75 ~Vi~~-~~~~~-------------------~~~~~~~~a----~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +|||+ ++...                   .+...++++    ++ +..++|++||...+..           ..+...|
T Consensus       109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y  177 (286)
T 1xu9_A          109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----------YPMVAAY  177 (286)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----------CTTCHHH
T ss_pred             EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC-----------CCCccHH
Confidence            99999 45421                   122233333    22 3469999999876422           1233446


Q ss_pred             -cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          130 -KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       130 -~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                       .+|...+.+.+         ..++++++++||.+.++.     .    .....         +.....+++++|+|+.+
T Consensus       178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~-----~----~~~~~---------~~~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-----A----MKAVS---------GIVHMQAAPKEECALEI  239 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-----H----HHHSC---------GGGGGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh-----H----HHhcc---------ccccCCCCCHHHHHHHH
Confidence             88988776542         347899999999987652     1    11000         01123568899999999


Q ss_pred             HHHhcCCC
Q 025702          200 VQVLGNEK  207 (249)
Q Consensus       200 ~~~~~~~~  207 (249)
                      +.+++.+.
T Consensus       240 ~~~~~~~~  247 (286)
T 1xu9_A          240 IKGGALRQ  247 (286)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99998754

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.53  E-value=1.3e-13  Score=106.45  Aligned_cols=195  Identities=17%  Similarity=0.160  Sum_probs=131.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|.++|.+|++.+|+......      ...+.+...++.++.+|++|++++++++++     -++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~------~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi   86 (258)
T 4gkb_A           13 TGGASGIGGAISMRLAEERAIPVVFARHAPDGAF------LDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG   86 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH------HHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH------HHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            7999999999999999999999999998765211      112233356889999999999888877754     27999


Q ss_pred             EEecCCCChh-------------------h----hHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREAD-------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~~-------------------~----~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||+||....                   +    ++.++..++ +..++|++||...+..           ......| .
T Consensus        87 LVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~-----------~~~~~~Y~a  155 (258)
T 4gkb_A           87 LVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTG-----------QGNTSGYCA  155 (258)
T ss_dssp             EEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHC-----------CSSCHHHHH
T ss_pred             EEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccC-----------CCCchHHHH
Confidence            9999986311                   1    222333444 3479999999776422           1122346 8


Q ss_pred             chHHHHHHH-------hhcCCcEEEeecceeeCCCCCcch-----HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          131 GKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPV-----EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       131 ~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      +|...+.+.       ...++++..+.||.+-.|......     ............++   +     .-+..++|+|++
T Consensus       156 sKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~g~peeiA~~  227 (258)
T 4gkb_A          156 SKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRFTTPDEIADT  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCCcCHHHHHHH
Confidence            898877654       346899999999999877522111     11122233333322   1     124558999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCcc
Q 025702          199 FVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++++++..  -..|+.+.+.+|.+
T Consensus       228 v~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          228 AVFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHhCchhcCccCCeEEECCCcc
Confidence            99998754  34789999988753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.53  E-value=4.6e-14  Score=108.79  Aligned_cols=181  Identities=15%  Similarity=0.118  Sum_probs=119.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEecc--CCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDR--KDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~--~d~~~l~~~~~~~-----~   72 (249)
                      |||+|+||+++++.|+++|++|++++|+........     ..+.. ....+.++.+|+  .|.+++.++++..     +
T Consensus        20 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~   94 (247)
T 3i1j_A           20 TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVS-----DQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR   94 (247)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHH-----HHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999865522110     01111 124677788877  8888887777642     7


Q ss_pred             CcEEEecCCCCh---------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA---------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        73 ~d~Vi~~~~~~~---------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +|++||++|...                     .+...++++    ++  +..++|++||...+..           ..+
T Consensus        95 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~  163 (247)
T 3i1j_A           95 LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG-----------RAN  163 (247)
T ss_dssp             CSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC-----------CTT
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC-----------CCC
Confidence            999999998621                     122333333    34  4579999999776421           223


Q ss_pred             CCcc-cchHHHHHHHh-------h-cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~-~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       . .+++++.++||.+..+.         ........         ....+..++|+|
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~---------~~~~~~~~---------~~~~~~~p~dva  225 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM---------RAQAYPDE---------NPLNNPAPEDIM  225 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH---------HHHHSTTS---------CGGGSCCGGGGT
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc---------chhccccc---------CccCCCCHHHHH
Confidence            3456 89988887652       2 46889999999886651         11111111         112346689999


Q ss_pred             HHHHHHhcCCC--CCCceEEe
Q 025702          197 RAFVQVLGNEK--ASRQVFNI  215 (249)
Q Consensus       197 ~~~~~~~~~~~--~~~~~~~i  215 (249)
                      +++++++....  ..|+.+++
T Consensus       226 ~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          226 PVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHHhCchhccccCeeecC
Confidence            99999997532  35666654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.51  E-value=3.1e-14  Score=109.61  Aligned_cols=188  Identities=14%  Similarity=0.152  Sum_probs=114.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEE-e--cCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHH-HHhhhhC-CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLF-T--RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLSAK-GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l-~~~~~~~-~~d~   75 (249)
                      |||+|+||+++++.|+++|++|+++ +  |++......        ..+. .+.++.  |..+.+.+ +++.+.. ++|+
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~--------~~~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            7 THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF--------ESEN-PGTIAL--AEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH--------HHHS-TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHH--------HHHh-CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999 5  875442110        0011 122222  44333222 2222222 6999


Q ss_pred             EEecCCCChh-----------------------hhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD-----------------------EVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        76 Vi~~~~~~~~-----------------------~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      +||++|....                       +...++++    ++  +..++|++||...+..           ..+.
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~  144 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP-----------LAYN  144 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTC
T ss_pred             EEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC-----------CCCc
Confidence            9999985321                       12223333    32  4679999999876532           1223


Q ss_pred             Ccc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCC--cchH-HHHHHHHHc-CCCeeecCCCcceEeeeeHHH
Q 025702          127 SRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY--NPVE-EWFFHRLKA-GRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       127 ~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      ..| .+|...+.+.+       ..+++++.++||.+..+...  .... ......... ..++         ..+..++|
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pe~  215 (244)
T 1zmo_A          145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL---------GRLGRPDE  215 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTT---------CSCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCC---------CCCcCHHH
Confidence            345 89988887653       35899999999999877420  1110 011111111 1111         13567999


Q ss_pred             HHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          195 LARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       195 ~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +|+++++++....  ..|+.+.+.+|.
T Consensus       216 vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          216 MGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHHcCccccCccCCEEEeCCCC
Confidence            9999999998643  357888887764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.48  E-value=3e-13  Score=107.63  Aligned_cols=187  Identities=14%  Similarity=0.094  Sum_probs=119.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCH-HHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDY-DFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~-~~l~~~~~~-----~~~   73 (249)
                      |||+|+||++++++|+++|++|++++|+..+.....     ..+.. ...++.++.+|++|. +.++.+++.     .++
T Consensus        18 TGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~i   92 (311)
T 3o26_A           18 TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAV-----EKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKL   92 (311)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----HHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999876522110     01111 124789999999997 777766653     279


Q ss_pred             cEEEecCCCCh--------------------------------------------------hh----hHHHHHhCC--CC
Q 025702           74 DVVYDINGREA--------------------------------------------------DE----VEPILDALP--NL   97 (249)
Q Consensus        74 d~Vi~~~~~~~--------------------------------------------------~~----~~~~~~a~~--~~   97 (249)
                      |+|||+||...                                                  .+    ++.++..++  +.
T Consensus        93 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~  172 (311)
T 3o26_A           93 DILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS  172 (311)
T ss_dssp             CEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred             CEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCC
Confidence            99999998631                                                  11    222333333  45


Q ss_pred             CeEEEeeccccccCCCC--------------------------------CCCCCCCCCCCCCcc-cchHHHHHHHh----
Q 025702           98 EQFIYCSSAGVYLKSDL--------------------------------LPHCETDTVDPKSRH-KGKLNTESVLE----  140 (249)
Q Consensus        98 ~~~i~~Ss~~v~~~~~~--------------------------------~~~~e~~~~~~~~~~-~~k~~~e~~~~----  140 (249)
                      .++|++||...+.....                                ........+.+...| .+|...+.+.+    
T Consensus       173 ~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  252 (311)
T 3o26_A          173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN  252 (311)
T ss_dssp             CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHh
Confidence            79999999765422100                                000011111233446 99998887753    


Q ss_pred             h-cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC-CCceEEecC
Q 025702          141 S-KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA-SRQVFNISG  217 (249)
Q Consensus       141 ~-~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~-~~~~~~i~~  217 (249)
                      + .+++++.+.||++..+....                         ......++.++.++.++..+.. .+..|..++
T Consensus       253 e~~~i~v~~v~PG~v~T~~~~~-------------------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s  306 (311)
T 3o26_A          253 KIPKFQVNCVCPGLVKTEMNYG-------------------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDCS  306 (311)
T ss_dssp             HCTTSEEEEECCCSBCSGGGTT-------------------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred             hcCCceEEEecCCceecCCcCC-------------------------CCCCCHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence            2 35889999999987763100                         0124678999999998876542 233444443

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.48  E-value=7.1e-14  Score=116.62  Aligned_cols=191  Identities=14%  Similarity=0.099  Sum_probs=122.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC------CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK------GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~------~~d   74 (249)
                      |||+|.||.++++.|.++|++|++++|+.....  +    .....  ..++.++.+|++|.++++++++..      .+|
T Consensus       219 TGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~--l----~~~~~--~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          219 TGAARGIGATIAEVFARDGATVVAIDVDGAAED--L----KRVAD--KVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH--H----HHHHH--HHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             eCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH--H----HHHHH--HcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            799999999999999999999999998643210  0    00111  125678999999998888877632      499


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +|||+||...                    .+..++.++    +.  +..+||++||...+...           .....
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~-----------~g~~~  359 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN-----------RGQTN  359 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC-----------TTCHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC-----------CCCHH
Confidence            9999998631                    123334443    33  45799999997664221           12334


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.       ...+++++.+.||.+..+.... .............+         ...+...+|+|+++.
T Consensus       360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~---------l~r~g~pedvA~~v~  429 (454)
T 3u0b_A          360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA-IPLATREVGRRLNS---------LFQGGQPVDVAELIA  429 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSBT---------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh-cchhhHHHHHhhcc---------ccCCCCHHHHHHHHH
Confidence            6 8898666554       2458999999999998874211 00000001111111         112456899999999


Q ss_pred             HHhcCC--CCCCceEEecCCcc
Q 025702          201 QVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++...  ...|+.+++.++..
T Consensus       430 fL~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          430 YFASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             HHHCGGGTTCCSCEEEESSSBS
T ss_pred             HHhCCccCCCCCcEEEECCccc
Confidence            998753  23688999988753

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.44  E-value=2.8e-13  Score=105.18  Aligned_cols=185  Identities=17%  Similarity=0.142  Sum_probs=117.1

Q ss_pred             CCCcccchHHHHHHHHH---cCCeEEEEecCCCccccCCCCCCchhhhhc--cCceEEEEeccCCHHHHHHhhhhC----
Q 025702            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEF--SSKILHLKGDRKDYDFVKSSLSAK----   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~d~~d~~~l~~~~~~~----   71 (249)
                      |||+|.||++++++|++   +|++|++++|+........     ..+...  ..++.++.+|++|++++.++++..    
T Consensus        12 TGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (259)
T 1oaa_A           12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHH-----HHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence            79999999999999999   8999999999865421100     111111  346889999999999888877532    


Q ss_pred             ---CCc--EEEecCCCCh----------h-------------hhHHH----HHhCC-C---CCeEEEeeccccccCCCCC
Q 025702           72 ---GFD--VVYDINGREA----------D-------------EVEPI----LDALP-N---LEQFIYCSSAGVYLKSDLL  115 (249)
Q Consensus        72 ---~~d--~Vi~~~~~~~----------~-------------~~~~~----~~a~~-~---~~~~i~~Ss~~v~~~~~~~  115 (249)
                         ++|  ++||+||...          .             +...+    +..++ .   ..++|++||...+..    
T Consensus        87 ~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  162 (259)
T 1oaa_A           87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP----  162 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC----
T ss_pred             ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC----
Confidence               467  9999998521          1             11222    33333 2   257999999877521    


Q ss_pred             CCCCCCCCCCCCcc-cchHHHHHHHhh-----cCCcEEEeecceeeCCCCCcchHHHHH---------HHHHcCCCeeec
Q 025702          116 PHCETDTVDPKSRH-KGKLNTESVLES-----KGVNWTSLRPVYIYGPLNYNPVEEWFF---------HRLKAGRPIPIP  180 (249)
Q Consensus       116 ~~~e~~~~~~~~~~-~~k~~~e~~~~~-----~~~~~~~~r~~~v~g~~~~~~~~~~~~---------~~~~~~~~~~~~  180 (249)
                             ..+...| .+|...+.+.+.     .+++++.+.||.+-.+.     ...+.         ......  .   
T Consensus       163 -------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~-----~~~~~~~~~~~~~~~~~~~~--~---  225 (259)
T 1oaa_A          163 -------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM-----QQLARETSKDPELRSKLQKL--K---  225 (259)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH-----HHHHHHHCSCHHHHHHHHHH--H---
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch-----HHHHhhccCChhHHHHHHHh--h---
Confidence                   2233456 999988877532     24788899999876552     11111         111110  0   


Q ss_pred             CCCcceEeeeeHHHHHHHHHHHhcCC-CCCCceEEe
Q 025702          181 GSGIQVTQLGHVKDLARAFVQVLGNE-KASRQVFNI  215 (249)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~~~~~i  215 (249)
                          ....+.+++|+|++++++++.. ...|+.+++
T Consensus       226 ----p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          226 ----SDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             ----HTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             ----hcCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence                0123577999999999998742 224555544

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.43  E-value=4.1e-13  Score=107.65  Aligned_cols=142  Identities=16%  Similarity=0.113  Sum_probs=100.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh------ccCceEEEEeccCCHHHHHHhhhhC---
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE------FSSKILHLKGDRKDYDFVKSSLSAK---   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~d~~d~~~l~~~~~~~---   71 (249)
                      |||+|+||++++++|+++|++|+++.|+.......     ...+..      ...++.++.+|++|.+++.++++..   
T Consensus         8 TGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g   82 (327)
T 1jtv_A            8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ-----GRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (327)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT-----HHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             ECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHH-----HHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence            79999999999999999999999988875542111     011111      1257899999999999999888742   


Q ss_pred             CCcEEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           72 GFDVVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        72 ~~d~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      ++|++||++|...                    .++.+++++    ++  +..++|++||...+..           ...
T Consensus        83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~-----------~~~  151 (327)
T 1jtv_A           83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-----------LPF  151 (327)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-----------CTT
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC-----------CCC
Confidence            5999999998521                    123334444    33  5689999999876421           112


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCC
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL  158 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~  158 (249)
                      ...| .+|...+.+.+       ..++++++++||.+..+.
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence            3346 99998887653       368999999999998874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.38  E-value=5.6e-12  Score=105.96  Aligned_cols=181  Identities=18%  Similarity=0.149  Sum_probs=122.3

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----~~d~   75 (249)
                      |||+|.||.++++.|.++|+ +|+++.|+.......  ......+...+.++.++.+|++|.+++.++++..    .+|.
T Consensus       245 TGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~--~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~  322 (496)
T 3mje_A          245 TGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGA--AELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTA  322 (496)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTH--HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEE
T ss_pred             ECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHH--HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeE
Confidence            79999999999999999998 788888874331100  0011223333568999999999999999988742    5899


Q ss_pred             EEecCCCC---------------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           76 VYDINGRE---------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        76 Vi~~~~~~---------------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      |||++|..                     ..++.++.+++.  ...+||++||...+-..           .....| .+
T Consensus       323 vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~-----------~g~~~YaAa  391 (496)
T 3mje_A          323 VFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS-----------GGQPGYAAA  391 (496)
T ss_dssp             EEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC-----------TTCHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC-----------CCcHHHHHH
Confidence            99999863                     224566777755  67799999996653111           122345 88


Q ss_pred             hHHHHHHH---hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC
Q 025702          132 KLNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       132 k~~~e~~~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (249)
                      |...+.+.   +..+++++.+.||.+.+++....  ......+.+.           ....+..++.++++..++..+.
T Consensus       392 Ka~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~--~~~~~~l~~~-----------g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          392 NAYLDALAEHRRSLGLTASSVAWGTWGEVGMATD--PEVHDRLVRQ-----------GVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECEESSSCC--------CHHHHHT-----------TEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCeEEEEECCcccCCccccC--hHHHHHHHhc-----------CCCCCCHHHHHHHHHHHHcCCC
Confidence            88777665   45789999999998877653211  0111111111           1245678999999999998765

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.37  E-value=2.5e-12  Score=102.64  Aligned_cols=183  Identities=11%  Similarity=0.078  Sum_probs=111.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccc-cCCCCCC---chhhhhccCceEEEEeccCCHHHHHHhhhh-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGES---DQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----K   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~-~~~~~~~---~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~   71 (249)
                      |||+|+||+++++.|+++|++|++.+|...... ..-....   ...+..  .+. .+.+|+.|.+++.++++.     .
T Consensus        15 TGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~--~~~-~~~~D~~~~~~~~~~~~~~~~~~g   91 (319)
T 1gz6_A           15 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR--RGG-KAVANYDSVEAGEKLVKTALDTFG   91 (319)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH--TTC-EEEEECCCGGGHHHHHHHHHHHTS
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHh--hCC-eEEEeCCCHHHHHHHHHHHHHHcC
Confidence            799999999999999999999999876432100 0000000   011111  111 235799988766655432     2


Q ss_pred             CCcEEEecCCCCh--------------------hhhHHHHH----hCC--CCCeEEEeecccc-ccCCCCCCCCCCCCCC
Q 025702           72 GFDVVYDINGREA--------------------DEVEPILD----ALP--NLEQFIYCSSAGV-YLKSDLLPHCETDTVD  124 (249)
Q Consensus        72 ~~d~Vi~~~~~~~--------------------~~~~~~~~----a~~--~~~~~i~~Ss~~v-~~~~~~~~~~e~~~~~  124 (249)
                      ++|++||+||...                    .+...+.+    .++  +..++|++||... ++..            
T Consensus        92 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~------------  159 (319)
T 1gz6_A           92 RIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF------------  159 (319)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC------------
Confidence            7999999998521                    11222333    333  5679999999644 3321            


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      +...| .+|...+.+.+       ..+++++.++||.+ .+.. ....+                  .....+++++|+|
T Consensus       160 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~-~~~~~------------------~~~~~~~~p~dvA  219 (319)
T 1gz6_A          160 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT-ETVMP------------------EDLVEALKPEYVA  219 (319)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT-GGGSC------------------HHHHHHSCGGGTH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc-cccCC------------------hhhhccCCHHHHH
Confidence            23346 99988876653       35899999999986 4321 11000                  0112346789999


Q ss_pred             HHHHHHhcCCC-CCCceEEecCC
Q 025702          197 RAFVQVLGNEK-ASRQVFNISGE  218 (249)
Q Consensus       197 ~~~~~~~~~~~-~~~~~~~i~~~  218 (249)
                      +++++++..+. ..|+.|++.+|
T Consensus       220 ~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          220 PLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             HHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHhCchhhcCCCEEEECCC
Confidence            99999987642 25777877554

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.36  E-value=3.8e-11  Score=95.01  Aligned_cols=199  Identities=10%  Similarity=-0.039  Sum_probs=115.4

Q ss_pred             CCCc--ccchHHHHHHHHHcCCeEEEEecCCCc-------cccCCCCCCchhhhhcc--CceEEEEec--------cC--
Q 025702            1 MGGT--RFIGVFLSRLLVKEGHQVTLFTRGKAP-------IAQQLPGESDQEFAEFS--SKILHLKGD--------RK--   59 (249)
Q Consensus         1 ~G~t--G~iG~~l~~~L~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~--~~v~~~~~d--------~~--   59 (249)
                      |||+  |.||++++++|+++|++|++++|++..       ....+.. . ..+....  .....+.+|        +.  
T Consensus        14 TGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~dv~~D   91 (297)
T 1d7o_A           14 AGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQ-S-RVLPDGSLMEIKKVYPLDAVFDNPEDVPED   91 (297)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTG-G-GBCTTSSBCCEEEEEEECTTCCSGGGSCHH
T ss_pred             ECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhh-h-hhhccccccccccccccceeccchhhhhhh
Confidence            6998  999999999999999999999864210       0000000 0 0000000  002233332        22  


Q ss_pred             --C--------HHHHHHhhhh-----CCCcEEEecCCCCh----------------------hhhHHHHHhCC----CCC
Q 025702           60 --D--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDALP----NLE   98 (249)
Q Consensus        60 --d--------~~~l~~~~~~-----~~~d~Vi~~~~~~~----------------------~~~~~~~~a~~----~~~   98 (249)
                        |        +++++++++.     -++|++||+||...                      .+...+++++.    +..
T Consensus        92 v~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g  171 (297)
T 1d7o_A           92 VKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGG  171 (297)
T ss_dssp             HHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             hhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCc
Confidence              1        3344444432     17999999997421                      12333444432    236


Q ss_pred             eEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh--------hcCCcEEEeecceeeCCCCCc-chHHHHH
Q 025702           99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNYN-PVEEWFF  168 (249)
Q Consensus        99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~--------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~  168 (249)
                      ++|++||...+...          +.....| .+|...+.+.+        ..+++++.++||.+.++.... .....+.
T Consensus       172 ~iv~isS~~~~~~~----------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~  241 (297)
T 1d7o_A          172 ASISLTYIASERII----------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI  241 (297)
T ss_dssp             EEEEEECGGGTSCC----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred             eEEEEeccccccCC----------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHH
Confidence            89999997764211          1111245 89988776542        268999999999999986432 1223333


Q ss_pred             HHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      .......++         ..+.+++|+|+++++++...  ...|+.+++.+|..
T Consensus       242 ~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          242 EYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            333222221         12457899999999998753  23688999988854

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.34  E-value=1.6e-13  Score=110.06  Aligned_cols=146  Identities=12%  Similarity=0.109  Sum_probs=95.6

Q ss_pred             CCCcccchHHHHHHHHHcCC-------eEEEEecCCCcc-ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKG   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~   72 (249)
                      |||+||+|++++..|+++|+       +|+++++.+... ...    ....+.  ...+.++ .|+.+.+.+.+.++  +
T Consensus        10 tGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g----~~~dl~--~~~~~~~-~di~~~~~~~~a~~--~   80 (327)
T 1y7t_A           10 TGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEG----VVMELE--DCAFPLL-AGLEATDDPKVAFK--D   80 (327)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHH----HHHHHH--TTTCTTE-EEEEEESCHHHHTT--T
T ss_pred             ECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccc----hhhhhh--ccccccc-CCeEeccChHHHhC--C
Confidence            79999999999999999886       899998864210 000    000011  0112233 57776666777787  9


Q ss_pred             CcEEEecCCCC--------------hhhhHHHHHhCC--C-CC-eEEEeeccc-cccCCCCCCCCCCC-CCCCCCcc-cc
Q 025702           73 FDVVYDINGRE--------------ADEVEPILDALP--N-LE-QFIYCSSAG-VYLKSDLLPHCETD-TVDPKSRH-KG  131 (249)
Q Consensus        73 ~d~Vi~~~~~~--------------~~~~~~~~~a~~--~-~~-~~i~~Ss~~-v~~~~~~~~~~e~~-~~~~~~~~-~~  131 (249)
                      +|+|||+|+..              ...+++++++++  + .+ ++++.|+.. +....    ..+.. ...|...| .+
T Consensus        81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~----~~~~~~~~~p~~~yg~t  156 (327)
T 1y7t_A           81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALI----AYKNAPGLNPRNFTAMT  156 (327)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH----HHHTCTTSCGGGEEECC
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHH----HHHHcCCCChhheeccc
Confidence            99999999863              335778888876  4 43 778777643 11100    00111 23444556 89


Q ss_pred             hHHHHHHH----hhcCCcEEEeecceeeCCCC
Q 025702          132 KLNTESVL----ESKGVNWTSLRPVYIYGPLN  159 (249)
Q Consensus       132 k~~~e~~~----~~~~~~~~~~r~~~v~g~~~  159 (249)
                      |...|.+.    +..+++.+++|++++|||+.
T Consensus       157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             hHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            99888865    45689999999999999864

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.33  E-value=3.2e-11  Score=102.39  Aligned_cols=200  Identities=15%  Similarity=0.081  Sum_probs=125.4

Q ss_pred             CCCcccchHHHHHHHHHcCCe-EEEE-ecCCCcccc--------CCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ-VTLF-TRGKAPIAQ--------QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~-v~~~-~r~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~   70 (249)
                      |||+|.||.++++.|.++|++ |+++ .|+..+...        .........+...+..+.++.+|++|.+++.++++.
T Consensus       257 TGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  336 (525)
T 3qp9_A          257 TGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAG  336 (525)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHT
T ss_pred             ECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHH
Confidence            799999999999999999987 5555 676432000        000001122333456799999999999999999874


Q ss_pred             C----CCcEEEecCCCC--------------------hhhhHHHHHhCC------C-CCeEEEeeccccccCCCCCCCCC
Q 025702           71 K----GFDVVYDINGRE--------------------ADEVEPILDALP------N-LEQFIYCSSAGVYLKSDLLPHCE  119 (249)
Q Consensus        71 ~----~~d~Vi~~~~~~--------------------~~~~~~~~~a~~------~-~~~~i~~Ss~~v~~~~~~~~~~e  119 (249)
                      .    .+|.|||++|..                    +.++.++.+++.      + ..+||++||...+-..       
T Consensus       337 i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~-------  409 (525)
T 3qp9_A          337 VSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG-------  409 (525)
T ss_dssp             SCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC-------
T ss_pred             HHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC-------
Confidence            3    589999999862                    123444555432      1 6799999997654211       


Q ss_pred             CCCCCCCCcc-cchHHHHHHHh---hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          120 TDTVDPKSRH-KGKLNTESVLE---SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       120 ~~~~~~~~~~-~~k~~~e~~~~---~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                          .....| .+|...+.+.+   ..+++++.+.||.+-+++......   ...+...           ....+..+++
T Consensus       410 ----~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~~~---~~~~~~~-----------g~~~l~pee~  471 (525)
T 3qp9_A          410 ----AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEGAT---GERLRRL-----------GLRPLAPATA  471 (525)
T ss_dssp             ----TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSSHH---HHHHHHT-----------TBCCBCHHHH
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccchhh---HHHHHhc-----------CCCCCCHHHH
Confidence                122346 88988887763   468899999999883221111111   1111111           1235678999


Q ss_pred             HHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHH
Q 025702          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACA  231 (249)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~  231 (249)
                      ++++..++..+..   ...+..   +.|..+...+.
T Consensus       472 a~~l~~~l~~~~~---~v~v~~---~dw~~~~~~~~  501 (525)
T 3qp9_A          472 LTALDTALGHGDT---AVTIAD---VDWSSFAPGFT  501 (525)
T ss_dssp             HHHHHHHHHHTCS---EEEECC---BCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCC---eEEEEe---CCHHHHHhhcc
Confidence            9999999987642   222332   55666665544

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.24  E-value=2.2e-10  Score=91.94  Aligned_cols=145  Identities=7%  Similarity=-0.117  Sum_probs=88.9

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCC---------CccccCCCCCCchhhhhccCceEEEEeccCCH--H-----
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGK---------APIAQQLPGESDQEFAEFSSKILHLKGDRKDY--D-----   62 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~--~-----   62 (249)
                      |||++  .||.+++++|+++|++|++.+|++         ..... .... ..........+.++.+|+.+.  +     
T Consensus         8 TGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~-~~~~-~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~   85 (329)
T 3lt0_A            8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKF-DNDM-IIDKDKKMNILDMLPFDASFDTANDIDEE   85 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTT-TGGG-BCSSSCBCCEEEEEECCTTCSSGGGCCHH
T ss_pred             ECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHH-HHHH-HHhhcccccccccccccccccchhhhhhh
Confidence            67764  899999999999999999887664         11000 0000 000000123467888888776  5     


Q ss_pred             -------------HHHHhhhh-----CCCcEEEecCCCCh----------------------hhhHHHHHh----CCCCC
Q 025702           63 -------------FVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDA----LPNLE   98 (249)
Q Consensus        63 -------------~l~~~~~~-----~~~d~Vi~~~~~~~----------------------~~~~~~~~a----~~~~~   98 (249)
                                   ++.++++.     -++|++||+||...                      .+...+..+    ++...
T Consensus        86 ~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g  165 (329)
T 3lt0_A           86 TKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQS  165 (329)
T ss_dssp             HHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             hcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC
Confidence                         66655543     26999999998521                      112223333    33226


Q ss_pred             eEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH-------hh-cCCcEEEeecceeeCC
Q 025702           99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL-------ES-KGVNWTSLRPVYIYGP  157 (249)
Q Consensus        99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~-------~~-~~~~~~~~r~~~v~g~  157 (249)
                      ++|++||...+...          +.....| .+|...+.+.       .. .+++++.+.||.+..+
T Consensus       166 ~Iv~isS~~~~~~~----------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          166 SIISLTYHASQKVV----------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEECGGGTSCC----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             eEEEEeCccccCCC----------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            89999997753211          1111145 8998777654       24 6899999999998765

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.13  E-value=9.1e-10  Score=87.78  Aligned_cols=199  Identities=14%  Similarity=0.027  Sum_probs=111.6

Q ss_pred             CCC--cccchHHHHHHHHHcCCeEEEEecCCC-------ccccCCCCCCchhhhhcc--CceEEEEec------------
Q 025702            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGKA-------PIAQQLPGESDQEFAEFS--SKILHLKGD------------   57 (249)
Q Consensus         1 ~G~--tG~iG~~l~~~L~~~g~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~--~~v~~~~~d------------   57 (249)
                      |||  +|.||+++++.|+++|++|++++|++.       .....+.. . ..+....  ..+.++.+|            
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D   92 (315)
T 2o2s_A           15 AGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDE-D-RKLPDGSLIEFAGVYPLDAAFDKPEDVPQD   92 (315)
T ss_dssp             ECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHH-H-HBCTTSCBCCCSCEEECCTTCSSTTSSCHH
T ss_pred             eCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhh-h-hhhhccccccccccccccccccccchhhhh
Confidence            687  899999999999999999999987531       00000000 0 0000000  002333333            


Q ss_pred             cCC--------HHHHHHhhhh-----CCCcEEEecCCCCh----------------------hhhHHHHHhCC----CCC
Q 025702           58 RKD--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPILDALP----NLE   98 (249)
Q Consensus        58 ~~d--------~~~l~~~~~~-----~~~d~Vi~~~~~~~----------------------~~~~~~~~a~~----~~~   98 (249)
                      ++|        .++++++++.     -++|++||++|...                      .+...+++++.    +..
T Consensus        93 v~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g  172 (315)
T 2o2s_A           93 IKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGG  172 (315)
T ss_dssp             HHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEE
T ss_pred             hhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCC
Confidence            332        3344444432     17999999998421                      12233444432    236


Q ss_pred             eEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh--------hcCCcEEEeecceeeCCCCC-------cc
Q 025702           99 QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPLNY-------NP  162 (249)
Q Consensus        99 ~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~--------~~~~~~~~~r~~~v~g~~~~-------~~  162 (249)
                      ++|++||...+...          +.....| .+|...+.+.+        ..+++++.++||.+..+...       ..
T Consensus       173 ~Iv~isS~~~~~~~----------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~  242 (315)
T 2o2s_A          173 SAVTLSYLAAERVV----------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKS  242 (315)
T ss_dssp             EEEEEEEGGGTSCC----------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSC
T ss_pred             EEEEEecccccccC----------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccch
Confidence            89999997764211          1111235 89988776542        26899999999998765200       00


Q ss_pred             hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          163 VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +...+........++         ..+..++|+|+++++++...  ...|+.+.+.+|..
T Consensus       243 ~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          243 FIDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             HHHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hHHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence            111111111111111         12457899999999998753  23688899888764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.11  E-value=2.8e-10  Score=90.90  Aligned_cols=205  Identities=12%  Similarity=-0.025  Sum_probs=97.8

Q ss_pred             CCC--cccchHHHHHHHHHcCCeEEEEecCC-----------Ccccc--CCCC----CCchhhhhccC---ceEEEEecc
Q 025702            1 MGG--TRFIGVFLSRLLVKEGHQVTLFTRGK-----------APIAQ--QLPG----ESDQEFAEFSS---KILHLKGDR   58 (249)
Q Consensus         1 ~G~--tG~iG~~l~~~L~~~g~~v~~~~r~~-----------~~~~~--~~~~----~~~~~~~~~~~---~v~~~~~d~   58 (249)
                      |||  +|.||+++++.|+++|++|++++|++           .....  .+..    .....+.....   ...++.+|+
T Consensus        15 TGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   94 (319)
T 2ptg_A           15 AGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDA   94 (319)
T ss_dssp             ECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEEECCT
T ss_pred             eCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccccccc
Confidence            687  89999999999999999999998742           11000  0000    00001110000   124444432


Q ss_pred             ------------CC--------HHHHHHhhhh-----CCCcEEEecCCCCh----------------------hhhHHHH
Q 025702           59 ------------KD--------YDFVKSSLSA-----KGFDVVYDINGREA----------------------DEVEPIL   91 (249)
Q Consensus        59 ------------~d--------~~~l~~~~~~-----~~~d~Vi~~~~~~~----------------------~~~~~~~   91 (249)
                                  +|        .+++.++++.     -++|++||++|...                      .+...++
T Consensus        95 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  174 (319)
T 2ptg_A           95 VFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLL  174 (319)
T ss_dssp             TCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHH
Confidence                        22        2244444432     17999999987421                      1122334


Q ss_pred             HhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH-------h-hcCCcEEEeecceeeCCC
Q 025702           92 DALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL-------E-SKGVNWTSLRPVYIYGPL  158 (249)
Q Consensus        92 ~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~-------~-~~~~~~~~~r~~~v~g~~  158 (249)
                      +++.    +..++|++||...+...          +.....| .+|...+.+.       . ..+++++.++||.+..+.
T Consensus       175 ~~~~~~m~~~g~Iv~isS~~~~~~~----------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  244 (319)
T 2ptg_A          175 QHFLPLMKEGGSALALSYIASEKVI----------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA  244 (319)
T ss_dssp             HHHGGGEEEEEEEEEEEECC----------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred             HHHHHHHhcCceEEEEecccccccc----------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence            4422    23689999997654211          1111234 7887666543       2 268999999999998764


Q ss_pred             CCcch---HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcc
Q 025702          159 NYNPV---EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       159 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      .....   ...+.....+.  +   ........+..++|+|+++++++...  ...|+.+.+.+|..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~--~---~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          245 ASAIGKAGDKTFIDLAIDY--S---EANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             hhhcccccchhhHHHHHHH--H---hccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            21100   00000000000  0   00011123567999999999999753  33688999988764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.08  E-value=1.4e-10  Score=100.39  Aligned_cols=206  Identities=13%  Similarity=0.035  Sum_probs=114.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCC-CCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLP-GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||+|.||+++++.|+++|++|++++|.......... ...+....+.......+.+|+.|.+++.++++..     ++|
T Consensus        25 TGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~iD  104 (613)
T 3oml_A           25 TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVD  104 (613)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC----------
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHHHHCCCCc
Confidence            7999999999999999999999999883321100000 0000000111111112347999888777777532     699


Q ss_pred             EEEecCCCCh--------------------hhhHHHHHh----CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREA--------------------DEVEPILDA----LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~--------------------~~~~~~~~a----~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||...                    .+...+.++    ++  +..++|++||...+..           ......
T Consensus       105 iLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~-----------~~~~~~  173 (613)
T 3oml_A          105 ILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG-----------NFGQVN  173 (613)
T ss_dssp             CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC-----------CTTCHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC-----------CCCChH
Confidence            9999998631                    122333333    33  4579999999665321           112334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..+++++.+.|+.+ .+..             .+. .     .......+..+|+|.+++
T Consensus       174 Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~-------------~~~-~-----~~~~~~~~~pedvA~~v~  233 (613)
T 3oml_A          174 YTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMT-------------EGI-L-----PDILFNELKPKLIAPVVA  233 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------CCC-C-----CHHHHTTCCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhh-------------hhc-c-----chhhhhcCCHHHHHHHHH
Confidence            6 89988776642       35789999999853 2210             000 0     011123346899999999


Q ss_pred             HHhcCCC-CCCceEEecCCc--------------------cccHHHHHHHHHHHhCCC
Q 025702          201 QVLGNEK-ASRQVFNISGEK--------------------YVTFDGLARACAKVTGYC  237 (249)
Q Consensus       201 ~~~~~~~-~~~~~~~i~~~~--------------------~~s~~~l~~~~~~~~g~~  237 (249)
                      +++.... ..|+.+++.+|.                    ..+..++.+.+.+..+..
T Consensus       234 ~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~  291 (613)
T 3oml_A          234 YLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMS  291 (613)
T ss_dssp             HTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCT
T ss_pred             HhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccc
Confidence            9887652 257777776542                    235556666666666543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.96  E-value=6.8e-09  Score=92.31  Aligned_cols=182  Identities=17%  Similarity=0.155  Sum_probs=118.9

Q ss_pred             CCCcccchHHHHHHHH-HcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC----CCc
Q 025702            1 MGGTRFIGVFLSRLLV-KEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----~~d   74 (249)
                      |||+|-+|+++++.|. ++|. +|++++|+...... . .....++...+..+.++.+|++|.+++.++++..    .+|
T Consensus       536 tGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~-~-~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id  613 (795)
T 3slk_A          536 TGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASG-A-AELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLT  613 (795)
T ss_dssp             ETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTT-H-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEE
T ss_pred             ccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHH-H-HHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCE
Confidence            6999999999999999 7898 58899998433111 0 0001122233567899999999999999888643    589


Q ss_pred             EEEecCCCC--------------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           75 VVYDINGRE--------------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        75 ~Vi~~~~~~--------------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      .|||+|+..                    +.++.++.+++. .. +||++||...+-..           .....| .+|
T Consensus       614 ~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~-----------~g~~~YaAak  681 (795)
T 3slk_A          614 AVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGS-----------GGQGNYAAAN  681 (795)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTC-----------SSCHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCC-----------CCCHHHHHHH
Confidence            999999862                    334666777765 44 89999997654211           112335 888


Q ss_pred             HHHHHHH---hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC
Q 025702          133 LNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK  207 (249)
Q Consensus       133 ~~~e~~~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  207 (249)
                      ...+.+.   +..+++++.+.||.+-+++............+.+..           ...+..++..+.+..++..+.
T Consensus       682 a~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g-----------~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          682 SFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSG-----------LLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTT-----------BCCCCHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcC-----------CCCCCHHHHHHHHHHHHhCCC
Confidence            7666554   457899999999988765421111111111221111           234567888888888887654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.91  E-value=1.4e-08  Score=87.63  Aligned_cols=200  Identities=14%  Similarity=0.114  Sum_probs=124.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEecc-CCHHHH-HHhhhhC-CCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR-KDYDFV-KSSLSAK-GFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~d~~~l-~~~~~~~-~~d~Vi   77 (249)
                      |||++-||+++++.|.++|++|++.+|.....       ....+......+..+.+|+ .+.+.+ +++.+.. ++|++|
T Consensus       328 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~-------~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          328 TGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK-------TVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH-------HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             ECcchHHHHHHHHHHHHCCCEEEEEeCccHHH-------HHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999999999987632110       0112222234566777888 654433 3333322 799999


Q ss_pred             ecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           78 DINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        78 ~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      |+||....                    +    ++.++..++  +..++|++||...+-.           ......| .
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~-----------~~~~~~Y~a  469 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG-----------NFGQANYSS  469 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC-----------CTTBHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC-----------CCCChhHHH
Confidence            99986311                    1    333444443  4579999999664311           1112345 8


Q ss_pred             chHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|.....+.       ...+++++.+.|+. -.+.     .....    .. .         .......+|+|.++++++
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m-----~~~~~----~~-~---------~~~~~~pe~vA~~v~~L~  529 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM-----TLSIM----RE-Q---------DKNLYHADQVAPLLVYLG  529 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------------CCSSCGGGTHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc-----ccccC----ch-h---------hccCCCHHHHHHHHHHHh
Confidence            898776553       34689999999983 3221     10000    00 0         012346899999999988


Q ss_pred             cCCC-CCCceEEecCCc-----------------cccHHHHHHHHHHHhCCCc
Q 025702          204 GNEK-ASRQVFNISGEK-----------------YVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       204 ~~~~-~~~~~~~i~~~~-----------------~~s~~~l~~~~~~~~g~~~  238 (249)
                      .... ..|+.+.+.+|.                 ..+..++.+.+.+......
T Consensus       530 s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  582 (604)
T 2et6_A          530 TDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT  582 (604)
T ss_dssp             STTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred             CCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence            6532 467788877763                 2578899999998887653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.86  E-value=2.7e-09  Score=72.09  Aligned_cols=85  Identities=24%  Similarity=0.180  Sum_probs=67.2

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      +|+ |++|+++++.|.+.| ++|++++|++.......           ..++.++.+|+.+.+.+.+.++  ++|+|||+
T Consensus        11 ~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~   76 (118)
T 3ic5_A           11 VGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----------RMGVATKQVDAKDEAGLAKALG--GFDAVISA   76 (118)
T ss_dssp             ECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----------TTTCEEEECCTTCHHHHHHHTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----------hCCCcEEEecCCCHHHHHHHHc--CCCEEEEC
Confidence            588 999999999999999 99999999875532110           2467888999999999999998  99999999


Q ss_pred             CCCChhhhHHHHHhCC--CCCeEE
Q 025702           80 NGREADEVEPILDALP--NLEQFI  101 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~--~~~~~i  101 (249)
                      ++.  ....++++++.  +++++.
T Consensus        77 ~~~--~~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           77 APF--FLTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             SCG--GGHHHHHHHHHHTTCEEEC
T ss_pred             CCc--hhhHHHHHHHHHhCCCEEE
Confidence            974  44577777765  554443

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.86  E-value=6.4e-09  Score=95.50  Aligned_cols=190  Identities=12%  Similarity=0.068  Sum_probs=112.3

Q ss_pred             CCCccc-chHHHHHHHHHcCCeEEEEe-cCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh--------
Q 025702            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (249)
Q Consensus         1 ~G~tG~-iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~--------   70 (249)
                      |||+|. ||.++++.|+++|++|++++ |+...... ............+..+.++.+|++|.+++.++++.        
T Consensus       482 TGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee-~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~  560 (1688)
T 2pff_A          482 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTD-YYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  560 (1688)
T ss_dssp             CSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTT-HHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSS
T ss_pred             ECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHH-HHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhcccc
Confidence            799998 99999999999999999984 55433211 00000000001134688899999999888877752        


Q ss_pred             -C--CCcEEEecCCCChhh-----------------------hHHHHHh------CC--CCCeEEEeeccccccCCCCCC
Q 025702           71 -K--GFDVVYDINGREADE-----------------------VEPILDA------LP--NLEQFIYCSSAGVYLKSDLLP  116 (249)
Q Consensus        71 -~--~~d~Vi~~~~~~~~~-----------------------~~~~~~a------~~--~~~~~i~~Ss~~v~~~~~~~~  116 (249)
                       .  ++|++||+||.....                       ...++++      +.  +..++|++||......     
T Consensus       561 GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-----  635 (1688)
T 2pff_A          561 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  635 (1688)
T ss_dssp             SCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-----
Confidence             2  489999999852111                       1112222      22  2258999998654211     


Q ss_pred             CCCCCCCCCCCcc-cchHHHHHHH-h----h--cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEe
Q 025702          117 HCETDTVDPKSRH-KGKLNTESVL-E----S--KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQ  188 (249)
Q Consensus       117 ~~e~~~~~~~~~~-~~k~~~e~~~-~----~--~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (249)
                              ....| .+|...+.+. +    .  ..++++.+.||++.+.......  .    . ......     .....
T Consensus       636 --------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~--e----~-~~~~l~-----~iplR  695 (1688)
T 2pff_A          636 --------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN--N----I-IAEGIE-----KMGVR  695 (1688)
T ss_dssp             --------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT--T----T-CSTTTS-----SSSCC
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc--h----H-HHHHHH-----hCCCC
Confidence                    12345 9999888872 1    1  1277888999998853211110  0    0 000000     00112


Q ss_pred             eeeHHHHHHHHHHHhcCCC---CCCceEEec
Q 025702          189 LGHVKDLARAFVQVLGNEK---ASRQVFNIS  216 (249)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~~---~~~~~~~i~  216 (249)
                      +..++|+|+++++++....   ..|+.+.+.
T Consensus       696 ~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VD  726 (1688)
T 2pff_A          696 TFSQKEMAFNLLGLLTPEVVELCQKSPVMAD  726 (1688)
T ss_dssp             CCCCCTTHHHHHHHTSTTHHHHHTTSCCCCC
T ss_pred             CCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence            3478999999999987651   146666553

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.83  E-value=1.2e-08  Score=83.85  Aligned_cols=82  Identities=6%  Similarity=-0.076  Sum_probs=59.3

Q ss_pred             CCCcccchHH--HHHHHHHcCCeEEEEecCCCccccCCC-------CCCchhhhhccCceEEEEeccCCHHHHHHhhhh-
Q 025702            1 MGGTRFIGVF--LSRLLVKEGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-   70 (249)
Q Consensus         1 ~G~tG~iG~~--l~~~L~~~g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-   70 (249)
                      |||++-||.+  ++++|.++|++|++++|+.........       ..........+..+..+.+|++|.+++.++++. 
T Consensus        66 TGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i  145 (418)
T 4eue_A           66 VGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYI  145 (418)
T ss_dssp             ESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            6999999999  999999999999999998655321110       000111222345688999999999888777753 


Q ss_pred             ----CCCcEEEecCCC
Q 025702           71 ----KGFDVVYDINGR   82 (249)
Q Consensus        71 ----~~~d~Vi~~~~~   82 (249)
                          -++|++||++|.
T Consensus       146 ~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          146 KDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHTTCCEEEEEECCCC
T ss_pred             HHHcCCCCEEEECCcc
Confidence                269999999875

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.78  E-value=7.7e-09  Score=97.50  Aligned_cols=187  Identities=12%  Similarity=0.058  Sum_probs=111.7

Q ss_pred             CCCccc-chHHHHHHHHHcCCeEEEEe-cCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh---C----
Q 025702            1 MGGTRF-IGVFLSRLLVKEGHQVTLFT-RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---K----   71 (249)
Q Consensus         1 ~G~tG~-iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~---~----   71 (249)
                      |||+|. ||.++++.|+++|++|++++ |+...... ........+......+.++.+|++|.+++.++++.   .    
T Consensus       681 TGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~-~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~  759 (1887)
T 2uv8_A          681 TGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTD-YYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNG  759 (1887)
T ss_dssp             ESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHH-HHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTT
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHH-HHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhcccc
Confidence            799998 99999999999999999985 54433111 00000000001134688999999999988887752   1    


Q ss_pred             ----CCcEEEecCCCChhh-----------------------hHHHHHhC---C-----CCCeEEEeeccccccCCCCCC
Q 025702           72 ----GFDVVYDINGREADE-----------------------VEPILDAL---P-----NLEQFIYCSSAGVYLKSDLLP  116 (249)
Q Consensus        72 ----~~d~Vi~~~~~~~~~-----------------------~~~~~~a~---~-----~~~~~i~~Ss~~v~~~~~~~~  116 (249)
                          ++|++||+||.....                       ...++.++   .     +..++|++||...+..     
T Consensus       760 G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-----  834 (1887)
T 2uv8_A          760 GLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-----  834 (1887)
T ss_dssp             SCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----
T ss_pred             ccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----
Confidence                489999999853111                       11222322   2     2358999998764311     


Q ss_pred             CCCCCCCCCCCcc-cchHHHHHH-H----hhc--CCcEEEeecceeeC-CCCCc-chHHHHHHHHHcCCCeeecCCCcce
Q 025702          117 HCETDTVDPKSRH-KGKLNTESV-L----ESK--GVNWTSLRPVYIYG-PLNYN-PVEEWFFHRLKAGRPIPIPGSGIQV  186 (249)
Q Consensus       117 ~~e~~~~~~~~~~-~~k~~~e~~-~----~~~--~~~~~~~r~~~v~g-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  186 (249)
                              ....| .+|...+.+ .    +..  .++++.+.||++.+ +.... ....    ......++         
T Consensus       835 --------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~----~~~~~~pl---------  893 (1887)
T 2uv8_A          835 --------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIA----EGIEKMGV---------  893 (1887)
T ss_dssp             --------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTH----HHHHTTSC---------
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHH----HHHHhcCC---------
Confidence                    12345 899877766 2    111  28899999999984 32110 1111    11111111         


Q ss_pred             EeeeeHHHHHHHHHHHhcCC---CCCCceEEe
Q 025702          187 TQLGHVKDLARAFVQVLGNE---KASRQVFNI  215 (249)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~---~~~~~~~~i  215 (249)
                       .+..++|+|+++++++...   ...|+.+.+
T Consensus       894 -r~~sPEEVA~avlfLaSd~~as~iTGq~I~V  924 (1887)
T 2uv8_A          894 -RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  924 (1887)
T ss_dssp             -CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred             -CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence             2347899999999988764   123566665

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.76  E-value=4.5e-08  Score=92.28  Aligned_cols=202  Identities=10%  Similarity=0.018  Sum_probs=118.7

Q ss_pred             CCCccc-chHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-------C-
Q 025702            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K-   71 (249)
Q Consensus         1 ~G~tG~-iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-------~-   71 (249)
                      |||+|. ||.++++.|+++|++|+++++................+...+..+.++.+|++|.+++.++++.       . 
T Consensus       658 TGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G  737 (1878)
T 2uv9_A          658 TGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLG  737 (1878)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCC
T ss_pred             ECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccC
Confidence            799998 9999999999999999998644322110000000000111134688999999999998887753       2 


Q ss_pred             -CCcEEEecCCCChhh-----------------------hHHHHH------hCC--CCCeEEEeeccccccCCCCCCCCC
Q 025702           72 -GFDVVYDINGREADE-----------------------VEPILD------ALP--NLEQFIYCSSAGVYLKSDLLPHCE  119 (249)
Q Consensus        72 -~~d~Vi~~~~~~~~~-----------------------~~~~~~------a~~--~~~~~i~~Ss~~v~~~~~~~~~~e  119 (249)
                       .+|+|||+||.....                       ...++.      .+.  +..+||++||...+..        
T Consensus       738 ~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--------  809 (1878)
T 2uv9_A          738 WDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--------  809 (1878)
T ss_dssp             CCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--------
T ss_pred             CCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--------
Confidence             489999999853111                       111222      122  2358999998654311        


Q ss_pred             CCCCCCCCcc-cchHHHHHHHh----h---cCCcEEEeecceee-CCCCCcchHHHHHHHHHcCCCeeecCCCcceEeee
Q 025702          120 TDTVDPKSRH-KGKLNTESVLE----S---KGVNWTSLRPVYIY-GPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       120 ~~~~~~~~~~-~~k~~~e~~~~----~---~~~~~~~~r~~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                           ....| .+|...+.+.+    .   ..++++.+.||++- .+....  . ..........++          .+.
T Consensus       810 -----g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~--~-~~~~~~~~~~pl----------r~~  871 (1878)
T 2uv9_A          810 -----NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA--N-NLVAEGVEKLGV----------RTF  871 (1878)
T ss_dssp             -----CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH--H-HHTHHHHHTTTC----------CCB
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc--c-hhhHHHHHhcCC----------CCC
Confidence                 12345 89987776532    1   13889999999987 443211  1 111111121111          233


Q ss_pred             eHHHHHHHHHHHhcCCC---CCCceEEec--CCcc--ccHHHHHH
Q 025702          191 HVKDLARAFVQVLGNEK---ASRQVFNIS--GEKY--VTFDGLAR  228 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~~---~~~~~~~i~--~~~~--~s~~~l~~  228 (249)
                      ..+|+|+++++++....   ..|..+.+.  +|..  ..+.++..
T Consensus       872 sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~  916 (1878)
T 2uv9_A          872 SQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMT  916 (1878)
T ss_dssp             CHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHH
T ss_pred             CHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHH
Confidence            78999999999886542   246666653  5532  33444443

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.76  E-value=3.2e-08  Score=80.14  Aligned_cols=82  Identities=11%  Similarity=-0.042  Sum_probs=59.3

Q ss_pred             CCCcccchHHHHHHHHH-cCCeEEEEecCCCccccCCC-------CCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-
Q 025702            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-   71 (249)
                      |||++-||.++++.|.+ +|.+|++++|+.........       ..........+..+..+.+|++|++++.++++.. 
T Consensus        53 TGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  132 (405)
T 3zu3_A           53 IGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIK  132 (405)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             eCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            69999999999999999 99999999987654221100       0001112223456788999999998888777532 


Q ss_pred             ----CCcEEEecCCC
Q 025702           72 ----GFDVVYDINGR   82 (249)
Q Consensus        72 ----~~d~Vi~~~~~   82 (249)
                          ++|++||++|.
T Consensus       133 ~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          133 QDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHTSCEEEEEECCCC
T ss_pred             HHcCCCCEEEEcCcc
Confidence                69999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.76  E-value=2.3e-08  Score=81.65  Aligned_cols=186  Identities=12%  Similarity=0.016  Sum_probs=111.4

Q ss_pred             CCCcccchHHHHHHHHH-cCCeEEEEecCCCccccCCC-------CCCchhhhhccCceEEEEeccCCHHHHHHhhhh--
Q 025702            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLP-------GESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~--   70 (249)
                      |||++-||.++++.|.+ +|++|++++|+.........       ..........+..+..+.+|++|++++.++++.  
T Consensus        67 TGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~  146 (422)
T 3s8m_A           67 IGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIK  146 (422)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            79999999999999999 99999999998665321100       000012222345688899999999887766642  


Q ss_pred             --C--CCcEEEecCCCC-----------------h------------------------h--h---------h---HHHH
Q 025702           71 --K--GFDVVYDINGRE-----------------A------------------------D--E---------V---EPIL   91 (249)
Q Consensus        71 --~--~~d~Vi~~~~~~-----------------~------------------------~--~---------~---~~~~   91 (249)
                        .  ++|++||++|..                 .                        .  .         .   ..++
T Consensus       147 ~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~  226 (422)
T 3s8m_A          147 TEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWI  226 (422)
T ss_dssp             HHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHH
T ss_pred             HHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHH
Confidence              2  689999998751                 0                        0  0         0   1222


Q ss_pred             HhC-----C-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCC
Q 025702           92 DAL-----P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGP  157 (249)
Q Consensus        92 ~a~-----~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~  157 (249)
                      .++     . +..++|++||....-.         .+......| .+|...+.+.+       ..+++++.+.||.+-.+
T Consensus       227 ~a~~~~~m~~~gG~IVniSSi~g~~~---------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~  297 (422)
T 3s8m_A          227 DALEGAGVLADGARSVAFSYIGTEIT---------WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ  297 (422)
T ss_dssp             HHHHHTTCEEEEEEEEEEEECCCGGG---------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred             HHHHHHHHhhCCCEEEEEeCchhhcc---------CCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence            221     1 2358999998764210         000011345 88988776642       46899999999999887


Q ss_pred             CCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          158 LNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       158 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                      .... +..+.+...+..  ++...|.         .+|+++++.+++...
T Consensus       298 ~~~~ip~~~~~~~~~~~--~m~r~G~---------pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          298 ASAAIPVMPLYISMVYK--IMKEKGL---------HEGTIEQLDRLFRER  336 (422)
T ss_dssp             TGGGSTHHHHHHHHHHH--HHHHTTC---------CCCHHHHHHHHHHHT
T ss_pred             hhhcCCCChHHHHHHHh--hhcCCcC---------hHHHHHHHHHHhcch
Confidence            5211 122222222211  2221122         477888888877543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.69  E-value=1.8e-07  Score=80.78  Aligned_cols=202  Identities=13%  Similarity=0.090  Sum_probs=115.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcccc----CCCCCCchhhhhccCceEEEEeccCCHHHHHHhh----hh-C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ----QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL----SA-K   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~----~~-~   71 (249)
                      |||++-||+++++.|.++|++|++.+|+......    ...+.....+......+   .+|+.|.+++++++    +. -
T Consensus        14 TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~~v~~~~~~~G   90 (604)
T 2et6_A           14 TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDKIVETAVKNFG   90 (604)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHHHHHHHHHHHS
T ss_pred             eCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHHHHHHHHHHcC
Confidence            7999999999999999999999999876521000    00000001111111222   34666654333332    22 2


Q ss_pred             CCcEEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           72 GFDVVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        72 ~~d~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      ++|++||+||....                    +    ++.++..++  +..++|++||...+-..           ..
T Consensus        91 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~-----------~~  159 (604)
T 2et6_A           91 TVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN-----------FG  159 (604)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC-----------CC
Confidence            69999999986311                    1    333444443  45799999996643111           11


Q ss_pred             CCcc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          126 KSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      ...| .+|.....+.       ...+++++.+.|+ +..+     +.    ..   ...       .........+|++.
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~-----m~----~~---~~~-------~~~~~~~~pe~vA~  219 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSR-----MT----ES---IMP-------PPMLEKLGPEKVAP  219 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCH-----HH----HT---TSC-------HHHHTTCSHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCc-----cc----cc---cCC-------hhhhccCCHHHHHH
Confidence            2245 8898776654       3468999999996 2211     11    00   000       00011246899999


Q ss_pred             HHHHHhcCCC-CCCceEEecCCc------------------cccHHHHHHHHHHHhCC
Q 025702          198 AFVQVLGNEK-ASRQVFNISGEK------------------YVTFDGLARACAKVTGY  236 (249)
Q Consensus       198 ~~~~~~~~~~-~~~~~~~i~~~~------------------~~s~~~l~~~~~~~~g~  236 (249)
                      ++++++.... ..|+.+.+.+|.                  ..+..++.+.+.+....
T Consensus       220 ~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          220 LVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             HHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             HHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence            9999987642 257777776652                  24567888877776544

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.54  E-value=1.6e-07  Score=65.53  Aligned_cols=91  Identities=13%  Similarity=0.109  Sum_probs=64.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~   79 (249)
                      +|+ |.+|+.+++.|.+.|++|++++|++..... +.          ..+...+.+|..+.+.+.++ +.  ++|+||++
T Consensus        12 ~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~-~~----------~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   77 (144)
T 2hmt_A           12 IGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-YA----------SYATHAVIANATEENELLSLGIR--NFEYVIVA   77 (144)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT-TT----------TTCSEEEECCTTCHHHHHTTTGG--GCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----------HhCCEEEEeCCCCHHHHHhcCCC--CCCEEEEC
Confidence            476 999999999999999999999997654222 21          12456778999998888765 55  89999999


Q ss_pred             CCCChhhhHHHHHhCC--CCCeEEEeec
Q 025702           80 NGREADEVEPILDALP--NLEQFIYCSS  105 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~--~~~~~i~~Ss  105 (249)
                      .+........+...++  +..++|..++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           78 IGANIQASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CCCchHHHHHHHHHHHHcCCCeEEEEeC
Confidence            9865333333444444  5556666554

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.28  E-value=1e-06  Score=61.40  Aligned_cols=87  Identities=25%  Similarity=0.215  Sum_probs=61.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+++++.|.+.|++|+++++++......         .  ..++.++.+|.++++.+.++ ++  ++|+||.+.+
T Consensus        13 G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~---------~--~~~~~~~~gd~~~~~~l~~~~~~--~~d~vi~~~~   79 (141)
T 3llv_A           13 GSEAAGVGLVRELTAAGKKVLAVDKSKEKIELL---------E--DEGFDAVIADPTDESFYRSLDLE--GVSAVLITGS   79 (141)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH---------H--HTTCEEEECCTTCHHHHHHSCCT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH---------H--HCCCcEEECCCCCHHHHHhCCcc--cCCEEEEecC
Confidence            349999999999999999999999986552111         1  24678899999999988876 33  8999999888


Q ss_pred             CChhhhHHHHHhCC--CCCeEEEe
Q 025702           82 READEVEPILDALP--NLEQFIYC  103 (249)
Q Consensus        82 ~~~~~~~~~~~a~~--~~~~~i~~  103 (249)
                      . ......+...++  +..++|-.
T Consensus        80 ~-~~~n~~~~~~a~~~~~~~iia~  102 (141)
T 3llv_A           80 D-DEFNLKILKALRSVSDVYAIVR  102 (141)
T ss_dssp             C-HHHHHHHHHHHHHHCCCCEEEE
T ss_pred             C-HHHHHHHHHHHHHhCCceEEEE
Confidence            3 222233333344  44455543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.21  E-value=1e-06  Score=69.11  Aligned_cols=74  Identities=19%  Similarity=0.223  Sum_probs=57.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|.+|++++..|++.|++|++++|+..+.... .    ..+.. ..++.++.+|++|.+++.++++  .+|+|||++
T Consensus       125 tGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l-~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~DvlVn~a  196 (287)
T 1lu9_A          125 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAA-A----DSVNK-RFKVNVTAAETADDASRAEAVK--GAHFVFTAG  196 (287)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H----HHHHH-HHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHH-H----HHHHh-cCCcEEEEecCCCHHHHHHHHH--hCCEEEECC
Confidence            68999999999999999999999999986542110 0    01111 1246778899999999999998  799999999


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      +.
T Consensus       197 g~  198 (287)
T 1lu9_A          197 AI  198 (287)
T ss_dssp             CT
T ss_pred             Cc
Confidence            75

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.20  E-value=2.2e-06  Score=84.66  Aligned_cols=142  Identities=18%  Similarity=0.155  Sum_probs=93.4

Q ss_pred             CCCcccchHHHHHHHHHcCCe-EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~~~d~   75 (249)
                      |||+|-||+++++.|.++|++ |++++|+........  .....+...+..+.++.+|++|.+++.++++.    ..+|.
T Consensus      1890 TGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~--~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~ 1967 (2512)
T 2vz8_A         1890 TGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQA--RQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGG 1967 (2512)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHH--HHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEE
T ss_pred             ECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHH--HHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcE
Confidence            699999999999999999987 777788765421000  00011112235688889999999988887753    26899


Q ss_pred             EEecCCCC--------------------hhhhHHHHH----hCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGRE--------------------ADEVEPILD----ALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~--------------------~~~~~~~~~----a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      |||+|+..                    ..++.++.+    .+....+||++||....-..           .....| .
T Consensus      1968 lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~-----------~g~~~Y~a 2036 (2512)
T 2vz8_A         1968 VFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN-----------AGQANYGF 2036 (2512)
T ss_dssp             EEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC-----------TTCHHHHH
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC-----------CCcHHHHH
Confidence            99999852                    223444433    34445799999996653111           112345 8


Q ss_pred             chHHHHHHHh---hcCCcEEEeecceee
Q 025702          131 GKLNTESVLE---SKGVNWTSLRPVYIY  155 (249)
Q Consensus       131 ~k~~~e~~~~---~~~~~~~~~r~~~v~  155 (249)
                      +|...+.+.+   ..|++...+-.+.+-
T Consensus      2037 aKaal~~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2037 ANSAMERICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHHTTSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHHCCCcEEEEEccCcC
Confidence            9988887764   567877777766543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.13  E-value=3.5e-06  Score=70.17  Aligned_cols=70  Identities=17%  Similarity=0.195  Sum_probs=55.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +| +|++|+++++.|++.|++|++++|+..+.......         ..++..+.+|+.|.+++.++++  ++|+|||++
T Consensus         9 iG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~---------~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a   76 (450)
T 1ff9_A            9 LG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---------VQHSTPISLDVNDDAALDAEVA--KHDLVISLI   76 (450)
T ss_dssp             EC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT---------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECC
T ss_pred             EC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh---------cCCceEEEeecCCHHHHHHHHc--CCcEEEECC
Confidence            46 79999999999999999999999986553221110         1347788899999999999998  999999998


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      +.
T Consensus        77 ~~   78 (450)
T 1ff9_A           77 PY   78 (450)
T ss_dssp             C-
T ss_pred             cc
Confidence            86

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.08  E-value=3.3e-06  Score=58.44  Aligned_cols=90  Identities=17%  Similarity=0.192  Sum_probs=60.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~   79 (249)
                      +|+ |++|+.+++.|.+.|++|++++|++.....         +.. ..++.++.+|..+.+.+.+. ++  ++|+||++
T Consensus        10 iG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~---------~~~-~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~   76 (140)
T 1lss_A           10 AGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK---------ASA-EIDALVINGDCTKIKTLEDAGIE--DADMYIAV   76 (140)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHH-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEEC
T ss_pred             ECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH---------HHH-hcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEe
Confidence            354 999999999999999999999997654211         000 12567788999888877654 55  89999999


Q ss_pred             CCCChhhhHHHHHhCC--CCCeEEEee
Q 025702           80 NGREADEVEPILDALP--NLEQFIYCS  104 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~--~~~~~i~~S  104 (249)
                      .+... ....+...++  +..++|..+
T Consensus        77 ~~~~~-~~~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           77 TGKEE-VNLMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             CSCHH-HHHHHHHHHHHTTCCCEEEEC
T ss_pred             eCCch-HHHHHHHHHHHcCCCEEEEEe
Confidence            77532 1222333343  445666443

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.06  E-value=6.4e-06  Score=65.67  Aligned_cols=94  Identities=17%  Similarity=0.241  Sum_probs=61.1

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +||+|++|++++..|+++|  ++|+++++++... ..      .++........+ .+ +.+.+.+.+.++  ++|+|||
T Consensus        14 iGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~-~~------~dL~~~~~~~~v-~~-~~~t~d~~~al~--gaDvVi~   82 (326)
T 1smk_A           14 LGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPG-VT------ADISHMDTGAVV-RG-FLGQQQLEAALT--GMDLIIV   82 (326)
T ss_dssp             ETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHH-HH------HHHHTSCSSCEE-EE-EESHHHHHHHHT--TCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHh-HH------HHhhcccccceE-EE-EeCCCCHHHHcC--CCCEEEE
Confidence            5889999999999999988  8999998765410 00      011110111111 12 334556777787  9999999


Q ss_pred             cCCCC--------------hhhhHHHHHhCC--CCCeEEEeec
Q 025702           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSS  105 (249)
Q Consensus        79 ~~~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss  105 (249)
                      +++..              ...++++++++.  ....+|+++|
T Consensus        83 ~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           83 PAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             cCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            98853              235677787766  5566777765

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.02  E-value=5.2e-05  Score=53.56  Aligned_cols=68  Identities=16%  Similarity=0.349  Sum_probs=52.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+.+++.|.+.|++|++++|++........          ..++.++.+|..+.+.+.+. ++  ++|+||.+.+
T Consensus        26 G~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~~   93 (155)
T 2g1u_A           26 GCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGME--KADMVFAFTN   93 (155)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGG--GCSEEEECSS
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCcc--cCCEEEEEeC
Confidence            35999999999999999999999998766432210          13566778898888777765 55  8999999887


Q ss_pred             C
Q 025702           82 R   82 (249)
Q Consensus        82 ~   82 (249)
                      .
T Consensus        94 ~   94 (155)
T 2g1u_A           94 D   94 (155)
T ss_dssp             C
T ss_pred             C
Confidence            5

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.89  E-value=3.2e-06  Score=69.54  Aligned_cols=95  Identities=13%  Similarity=0.080  Sum_probs=66.9

Q ss_pred             CCCcccchHHHHHHHHHcC---CeEEEEecCCCccccCCCCCCchhhhh-ccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAE-FSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +|+ |++|+.+++.|.+.|   .+|++.+|+..+.... .    ..+.. ...++..+.+|++|.+++.++++..++|+|
T Consensus         7 iGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~l-a----~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            7 IGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEI-A----QSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             ECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHH-H----HHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHH-H----HHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            477 899999999999998   3899999987653211 0    00100 013588899999999999999985569999


Q ss_pred             EecCCCChhhhHHHHHhCC-CCCeEEEe
Q 025702           77 YDINGREADEVEPILDALP-NLEQFIYC  103 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~-~~~~~i~~  103 (249)
                      ||+++..  ....++++|. ...+++-+
T Consensus        81 in~ag~~--~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           81 LNIALPY--QDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             EECSCGG--GHHHHHHHHHHHTCCEEES
T ss_pred             EECCCcc--cChHHHHHHHHhCCCEEEe
Confidence            9999853  3456777754 23345543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.87  E-value=2.2e-05  Score=55.40  Aligned_cols=71  Identities=14%  Similarity=0.230  Sum_probs=53.8

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~~   82 (249)
                      .|.+|+.+++.|.+.|++|+++++++......+.       .....++.++.+|.+|++.+.+. ++  ++|.||.+.+.
T Consensus        11 ~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~~   81 (153)
T 1id1_A           11 HSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGID--RCRAILALSDN   81 (153)
T ss_dssp             CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEECSSC
T ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHH-------HhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEecCC
Confidence            5999999999999999999999997532100000       00124689999999999998876 76  89999988775


Q ss_pred             C
Q 025702           83 E   83 (249)
Q Consensus        83 ~   83 (249)
                      .
T Consensus        82 d   82 (153)
T 1id1_A           82 D   82 (153)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.85  E-value=1.2e-05  Score=65.23  Aligned_cols=86  Identities=15%  Similarity=0.083  Sum_probs=64.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|| |++|+.+++.|.+ .++|.+.+++.......            ...+..+..|+.|.+++.++++  ++|+||++.
T Consensus        22 lGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~------------~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~   85 (365)
T 3abi_A           22 LGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV------------KEFATPLKVDASNFDKLVEVMK--EFELVIGAL   85 (365)
T ss_dssp             ECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH------------TTTSEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH------------hccCCcEEEecCCHHHHHHHHh--CCCEEEEec
Confidence            477 9999999998865 58999999886553221            2456778899999999999998  999999998


Q ss_pred             CCChhhhHHHHHhCC-CCCeEEEee
Q 025702           81 GREADEVEPILDALP-NLEQFIYCS  104 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~-~~~~~i~~S  104 (249)
                      +..  ....++++|- ...+++=+|
T Consensus        86 p~~--~~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           86 PGF--LGFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CGG--GHHHHHHHHHHHTCEEEECC
T ss_pred             CCc--ccchHHHHHHhcCcceEeee
Confidence            864  3456666654 334555544

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.81  E-value=5e-06  Score=66.39  Aligned_cols=95  Identities=9%  Similarity=0.020  Sum_probs=59.9

Q ss_pred             CCCcccchHHHHHHHHHcCC-------eEEEEecC----CCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-------QVTLFTRG----KAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~   69 (249)
                      |||+||+|++++..|+..|+       +|.+++++    ......     ....+......+   ..|+...+.+.+.++
T Consensus        11 iGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g-----~~~dl~~~~~~~---~~~i~~~~~~~~al~   82 (329)
T 1b8p_A           11 TGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQG-----VMMEIDDCAFPL---LAGMTAHADPMTAFK   82 (329)
T ss_dssp             SSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHH-----HHHHHHTTTCTT---EEEEEEESSHHHHTT
T ss_pred             ECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchh-----hHHHHhhhcccc---cCcEEEecCcHHHhC
Confidence            69999999999999999885       78888877    221100     000011000011   135544455667787


Q ss_pred             hCCCcEEEecCCCCh--------------hhhHHHHHhCC--C-CC-eEEEeec
Q 025702           70 AKGFDVVYDINGREA--------------DEVEPILDALP--N-LE-QFIYCSS  105 (249)
Q Consensus        70 ~~~~d~Vi~~~~~~~--------------~~~~~~~~a~~--~-~~-~~i~~Ss  105 (249)
                        ++|+|||+++...              ..++++++++.  . .. +||++|.
T Consensus        83 --~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           83 --DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             --TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence              9999999998632              23666777765  2 33 8888885

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.77  E-value=1.5e-05  Score=66.62  Aligned_cols=70  Identities=23%  Similarity=0.190  Sum_probs=55.3

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      +|+ |++|+.++..|++. |++|++++|+..+... +        .. ..++..+.+|+.|.+++.++++  ++|+|||+
T Consensus        29 iGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~-l--------a~-~~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~   95 (467)
T 2axq_A           29 LGS-GFVAQPVIDTLAANDDINVTVACRTLANAQA-L--------AK-PSGSKAISLDVTDDSALDKVLA--DNDVVISL   95 (467)
T ss_dssp             ECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHH-H--------HG-GGTCEEEECCTTCHHHHHHHHH--TSSEEEEC
T ss_pred             ECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHH-H--------HH-hcCCcEEEEecCCHHHHHHHHc--CCCEEEEC
Confidence            476 99999999999998 7899999998655211 1        11 1256777899999999999898  99999999


Q ss_pred             CCCC
Q 025702           80 NGRE   83 (249)
Q Consensus        80 ~~~~   83 (249)
                      ++..
T Consensus        96 tp~~   99 (467)
T 2axq_A           96 IPYT   99 (467)
T ss_dssp             SCGG
T ss_pred             Cchh
Confidence            8853

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.70  E-value=3.5e-05  Score=53.43  Aligned_cols=68  Identities=9%  Similarity=0.138  Sum_probs=54.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+.+++.|.+.|++|+++++++......         .  ..++.++.+|.++++.+.++ ++  ++|+||.+.+
T Consensus        14 G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~---------~--~~g~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~   80 (140)
T 3fwz_A           14 GYGRVGSLLGEKLLASDIPLVVIETSRTRVDEL---------R--ERGVRAVLGNAANEEIMQLAHLE--CAKWLILTIP   80 (140)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH---------H--HTTCEEEESCTTSHHHHHHTTGG--GCSEEEECCS
T ss_pred             CcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH---------H--HcCCCEEECCCCCHHHHHhcCcc--cCCEEEEECC
Confidence            459999999999999999999999997653211         1  24788899999999988765 44  8999998877


Q ss_pred             CC
Q 025702           82 RE   83 (249)
Q Consensus        82 ~~   83 (249)
                      ..
T Consensus        81 ~~   82 (140)
T 3fwz_A           81 NG   82 (140)
T ss_dssp             CH
T ss_pred             Ch
Confidence            53

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.64  E-value=0.00015  Score=54.43  Aligned_cols=63  Identities=14%  Similarity=0.212  Sum_probs=44.6

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHH----HHhhhhCCCcEEEec
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV----KSSLSAKGFDVVYDI   79 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l----~~~~~~~~~d~Vi~~   79 (249)
                      +|.+|.+++++|+++|++|++++|...... ..           ..++.++  ++...+++    .+.+.  ++|++||+
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~-----------~~~~~~~--~v~s~~em~~~v~~~~~--~~Dili~a   91 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKRALKP-EP-----------HPNLSIR--EITNTKDLLIEMQERVQ--DYQVLIHS   91 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CC-----------CTTEEEE--ECCSHHHHHHHHHHHGG--GCSEEEEC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCccccc-cC-----------CCCeEEE--EHhHHHHHHHHHHHhcC--CCCEEEEc
Confidence            899999999999999999999999764311 00           1355555  44444333    33333  79999999


Q ss_pred             CCC
Q 025702           80 NGR   82 (249)
Q Consensus        80 ~~~   82 (249)
                      |+.
T Consensus        92 AAv   94 (232)
T 2gk4_A           92 MAV   94 (232)
T ss_dssp             SBC
T ss_pred             Ccc
Confidence            985

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.62  E-value=4.7e-05  Score=55.33  Aligned_cols=79  Identities=19%  Similarity=0.092  Sum_probs=57.9

Q ss_pred             CcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh--hhhCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS--LSAKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~--~~~~~~d~Vi~~   79 (249)
                      |.|.+|+.+++.|.+. |++|+++++++..... +        .  ..++.++.+|.++.+.+.++  ++  ++|+||.+
T Consensus        46 G~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~--------~--~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~  112 (183)
T 3c85_A           46 GMGRIGTGAYDELRARYGKISLGIEIREEAAQQ-H--------R--SEGRNVISGDATDPDFWERILDTG--HVKLVLLA  112 (183)
T ss_dssp             CCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-H--------H--HTTCCEEECCTTCHHHHHTBCSCC--CCCEEEEC
T ss_pred             CCCHHHHHHHHHHHhccCCeEEEEECCHHHHHH-H--------H--HCCCCEEEcCCCCHHHHHhccCCC--CCCEEEEe
Confidence            4699999999999999 9999999998765221 1        1  24677888999998888776  65  89999988


Q ss_pred             CCCChhhhHHHHHhCC
Q 025702           80 NGREADEVEPILDALP   95 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~   95 (249)
                      .+. ......++..++
T Consensus       113 ~~~-~~~~~~~~~~~~  127 (183)
T 3c85_A          113 MPH-HQGNQTALEQLQ  127 (183)
T ss_dssp             CSS-HHHHHHHHHHHH
T ss_pred             CCC-hHHHHHHHHHHH
Confidence            765 233333444444

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.58  E-value=4.7e-05  Score=57.04  Aligned_cols=69  Identities=19%  Similarity=0.305  Sum_probs=54.6

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDIN   80 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~   80 (249)
                      | .|.+|+++++.|.+.|++|+++++++......         .. ..++.++.+|.++.+.++++ ++  ++|.||.+.
T Consensus         7 G-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l---------~~-~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~   73 (218)
T 3l4b_C            7 G-GETTAYYLARSMLSRKYGVVIINKDRELCEEF---------AK-KLKATIIHGDGSHKEILRDAEVS--KNDVVVILT   73 (218)
T ss_dssp             C-CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHH---------HH-HSSSEEEESCTTSHHHHHHHTCC--TTCEEEECC
T ss_pred             C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH---------HH-HcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEec
Confidence            5 59999999999999999999999987653210         00 13678899999999988876 55  899999887


Q ss_pred             CCC
Q 025702           81 GRE   83 (249)
Q Consensus        81 ~~~   83 (249)
                      +..
T Consensus        74 ~~d   76 (218)
T 3l4b_C           74 PRD   76 (218)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            753

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.57  E-value=9.8e-06  Score=63.94  Aligned_cols=91  Identities=16%  Similarity=0.119  Sum_probs=55.6

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEec--CCCccccCCCCCCchhhhhc---cCceEEEEeccCCHHHHHHhhhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r--~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~d~~d~~~l~~~~~~~~~   73 (249)
                      |||+|++|++++..|+..++  ++.++++  ++.....     ...++...   ..++.+...   +    .+.++  ++
T Consensus         6 iGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~-----~~~dl~~~~~~~~~~~v~~~---~----~~a~~--~a   71 (303)
T 1o6z_A            6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVG-----QAADTNHGIAYDSNTRVRQG---G----YEDTA--GS   71 (303)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHH-----HHHHHHHHHTTTCCCEEEEC---C----GGGGT--TC
T ss_pred             ECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHH-----HHHHHHHHHhhCCCcEEEeC---C----HHHhC--CC
Confidence            68999999999999998875  6777776  3321100     00111111   123333321   2    34466  99


Q ss_pred             cEEEecCCCCh--------------hhhHHHHHhCC--CCCeEEEeec
Q 025702           74 DVVYDINGREA--------------DEVEPILDALP--NLEQFIYCSS  105 (249)
Q Consensus        74 d~Vi~~~~~~~--------------~~~~~~~~a~~--~~~~~i~~Ss  105 (249)
                      |+|||+++...              ..++++++++.  ....+|+++|
T Consensus        72 DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           72 DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            99999998532              35677888765  4566676665

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.56  E-value=5.6e-05  Score=59.90  Aligned_cols=93  Identities=18%  Similarity=0.158  Sum_probs=56.8

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEec--CCCccccCCCCCCchhhhhc----cCceEEEEeccCCHHHHHHhhhhCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTR--GKAPIAQQLPGESDQEFAEF----SSKILHLKGDRKDYDFVKSSLSAKG   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r--~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~d~~d~~~l~~~~~~~~   72 (249)
                      |||+|++|++++..|+..|.  ++.++++  +......     ....+...    ...+.+...    .+++.+.++  +
T Consensus         6 ~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~-----~~~dl~~~~~~~~~~~~i~~~----~d~l~~al~--g   74 (313)
T 1hye_A            6 IGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEG-----LREDIYDALAGTRSDANIYVE----SDENLRIID--E   74 (313)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHH-----HHHHHHHHHTTSCCCCEEEEE----ETTCGGGGT--T
T ss_pred             ECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHH-----HHHHHHHhHHhcCCCeEEEeC----CcchHHHhC--C
Confidence            69999999999999998874  6777776  3221100     00001110    012232221    123456677  9


Q ss_pred             CcEEEecCCCC--------------hhhhHHHHHhCC--CCCeEEEeec
Q 025702           73 FDVVYDINGRE--------------ADEVEPILDALP--NLEQFIYCSS  105 (249)
Q Consensus        73 ~d~Vi~~~~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss  105 (249)
                      +|+|||+++..              ...+++++++++  . ..+|+++|
T Consensus        75 aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence            99999999853              235777888876  6 77777776

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.55  E-value=6.8e-05  Score=55.18  Aligned_cols=93  Identities=16%  Similarity=0.155  Sum_probs=61.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHH---HHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~---l~~~~~~~~~d~Vi   77 (249)
                      +||+|.+|..+++.+...|.+|++++|++......         .+  .+... ..|..+.+.   +.+.....++|+||
T Consensus        45 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~---------~~--~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           45 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML---------SR--LGVEY-VGDSRSVDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH---------HT--TCCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             eeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--cCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence            68999999999999999999999999876542110         00  12221 236655433   33333333699999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      ++++.  ......++.++...++|.+++..
T Consensus       113 ~~~g~--~~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          113 NSLAG--EAIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSCGG
T ss_pred             ECCch--HHHHHHHHHhccCCEEEEEcCCC
Confidence            99873  45566677777445888887644

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.34  E-value=0.00035  Score=52.25  Aligned_cols=64  Identities=11%  Similarity=0.129  Sum_probs=45.0

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhh-hh-CCCcEEEecCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL-SA-KGFDVVYDING   81 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~-~~-~~~d~Vi~~~~   81 (249)
                      +|.+|.+++++|.++|++|+++++...-  . .+           .++.  ..|+.+.+++.+.+ +. .++|++||+|+
T Consensus        33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~l--~-~~-----------~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aa   96 (226)
T 1u7z_A           33 SGKMGFAIAAAAARRGANVTLVSGPVSL--P-TP-----------PFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAA   96 (226)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCCC--C-CC-----------TTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCB
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEECCccc--c-cC-----------CCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCc
Confidence            6999999999999999999999886521  1 11           2343  45777765544333 21 16999999998


Q ss_pred             CC
Q 025702           82 RE   83 (249)
Q Consensus        82 ~~   83 (249)
                      ..
T Consensus        97 v~   98 (226)
T 1u7z_A           97 VA   98 (226)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.25  E-value=0.00047  Score=54.88  Aligned_cols=91  Identities=16%  Similarity=0.118  Sum_probs=61.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~Vi   77 (249)
                      +||+|.+|..+++.+...|++|++++|++.+...         ..+.  +... ..|..+.+   .+.+.....++|+||
T Consensus       147 ~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~---------~~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          147 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS---------ALKA--GAWQ-VINYREEDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH---------HHHH--TCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHHc--CCCE-EEECCCccHHHHHHHHhCCCCceEEE
Confidence            6899999999999999999999999987654211         0111  1211 23555543   333333334799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++++  .......++.++...+++.+++
T Consensus       215 ~~~g--~~~~~~~~~~l~~~G~iv~~g~  240 (327)
T 1qor_A          215 DSVG--RDTWERSLDCLQRRGLMVSFGN  240 (327)
T ss_dssp             ECSC--GGGHHHHHHTEEEEEEEEECCC
T ss_pred             ECCc--hHHHHHHHHHhcCCCEEEEEec
Confidence            9999  4566677777774458887775

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.24  E-value=0.00018  Score=58.40  Aligned_cols=92  Identities=13%  Similarity=0.138  Sum_probs=62.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|+ |.+|+.+++.|...|++|++++|++.......        ......   +.+|..+.+.+.+.+.  ++|+||+++
T Consensus       172 iGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~--------~~~g~~---~~~~~~~~~~l~~~~~--~~DvVi~~~  237 (369)
T 2eez_A          172 LGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLD--------DVFGGR---VITLTATEANIKKSVQ--HADLLIGAV  237 (369)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTTTS---EEEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH--------HhcCce---EEEecCCHHHHHHHHh--CCCEEEECC
Confidence            477 99999999999999999999999875421100        001112   3557777888888887  899999998


Q ss_pred             CCChh-----hhHHHHHhCCCCCeEEEeecc
Q 025702           81 GREAD-----EVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        81 ~~~~~-----~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      +....     .....++.++....+|.+|+.
T Consensus       238 g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             C-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred             CCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence            85421     245667777755688888864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.22  E-value=0.0007  Score=54.02  Aligned_cols=91  Identities=20%  Similarity=0.187  Sum_probs=60.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~Vi   77 (249)
                      +||+|.+|..+++.+...|++|++++|++.+...         ..+.  +... ..|..+.+   .+.+.....++|+||
T Consensus       152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~---------~~~~--g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET---------ARKL--GCHH-TINYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHH--TCSE-EEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCCE-EEECCCHHHHHHHHHHhCCCCCeEEE
Confidence            6899999999999999999999999998644211         0111  1111 23555433   333433334799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +++|.  ......++.++...+++.++.
T Consensus       220 ~~~g~--~~~~~~~~~l~~~G~iv~~g~  245 (333)
T 1wly_A          220 DSIGK--DTLQKSLDCLRPRGMCAAYGH  245 (333)
T ss_dssp             ECSCT--TTHHHHHHTEEEEEEEEECCC
T ss_pred             ECCcH--HHHHHHHHhhccCCEEEEEec
Confidence            99986  556667777774457887764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.14  E-value=0.0002  Score=71.55  Aligned_cols=82  Identities=11%  Similarity=0.068  Sum_probs=57.6

Q ss_pred             CCCccc-chHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh---------
Q 025702            1 MGGTRF-IGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---------   70 (249)
Q Consensus         1 ~G~tG~-iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~---------   70 (249)
                      |||++- ||.++++.|+++|.+|++++|+.........+.....+...+..+..+.+|++|.++++++++.         
T Consensus      2142 TGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~f 2221 (3089)
T 3zen_D         2142 TGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESL 2221 (3089)
T ss_dssp             ESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEE
T ss_pred             eCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhc
Confidence            688888 9999999999999999999998665100000000011111134678889999999988877542         


Q ss_pred             CCCcEEEecCCC
Q 025702           71 KGFDVVYDINGR   82 (249)
Q Consensus        71 ~~~d~Vi~~~~~   82 (249)
                      -+.|++||+||.
T Consensus      2222 G~IDILVNNAGi 2233 (3089)
T 3zen_D         2222 GPQSIHLKDAQT 2233 (3089)
T ss_dssp             SSSEEEECCCCC
T ss_pred             CCCCEEEECCCc
Confidence            158999999986

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.03  E-value=0.00069  Score=51.15  Aligned_cols=64  Identities=13%  Similarity=-0.071  Sum_probs=51.9

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDINGR   82 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~~   82 (249)
                      .|.+|+.+++.|.+.|+ |+++++++.....          .  ..++.++.+|.+|++.++++ ++  ++|.||.+.+.
T Consensus        17 ~G~~G~~la~~L~~~g~-v~vid~~~~~~~~----------~--~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~~~~   81 (234)
T 2aef_A           17 WSESTLECLRELRGSEV-FVLAEDENVRKKV----------L--RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLES   81 (234)
T ss_dssp             CCHHHHHHHHHSTTSEE-EEEESCGGGHHHH----------H--HTTCEEEESCTTCHHHHHHTTCT--TCSEEEECCSC
T ss_pred             CChHHHHHHHHHHhCCe-EEEEECCHHHHHH----------H--hcCCeEEEcCCCCHHHHHhcCcc--hhcEEEEcCCC
Confidence            49999999999999999 9999888654211          0  14688999999999998876 66  89999988765

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.02  E-value=0.00099  Score=53.74  Aligned_cols=83  Identities=12%  Similarity=0.040  Sum_probs=60.9

Q ss_pred             CCCcccchHHHHHHHH-HcCCeEEEEecCCCccccCCCC-------CCchhhhhccCceEEEEeccCCHHHHHHhhhhC-
Q 025702            1 MGGTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPG-------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~-~~g~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-   71 (249)
                      |||+.-+|.+.+.+|. ..|..++++.+...........       .......+.+.....+.+|+.|.+.+.++++.. 
T Consensus        56 tGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~  135 (401)
T 4ggo_A           56 LGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAK  135 (401)
T ss_dssp             ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             ECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHH
Confidence            6999999999999988 6799999999877663322110       001223334567889999999998888877642 


Q ss_pred             ----CCcEEEecCCCC
Q 025702           72 ----GFDVVYDINGRE   83 (249)
Q Consensus        72 ----~~d~Vi~~~~~~   83 (249)
                          ++|+++|+++..
T Consensus       136 ~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          136 KKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HTTCCEEEEEECCCCS
T ss_pred             HhcCCCCEEEEecccc
Confidence                799999998863

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.95  E-value=0.00034  Score=56.23  Aligned_cols=91  Identities=12%  Similarity=0.022  Sum_probs=58.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH----HHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~----~l~~~~~~~~~d~V   76 (249)
                      +|++|-+|..+++.+...|.+|++++|++.....         ..+.  +... ..|+.+.+    .+.+.... ++|+|
T Consensus       176 ~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~---------~~~~--g~~~-~~d~~~~~~~~~~~~~~~~~-~~D~v  242 (347)
T 2hcy_A          176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL---------FRSI--GGEV-FIDFTKEKDIVGAVLKATDG-GAHGV  242 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH---------HHHT--TCCE-EEETTTCSCHHHHHHHHHTS-CEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH---------HHHc--CCce-EEecCccHhHHHHHHHHhCC-CCCEE
Confidence            5889999999999999999999999988665211         0111  2221 23665332    33333333 79999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      |++++. .......++.++...+++.+++
T Consensus       243 i~~~g~-~~~~~~~~~~l~~~G~iv~~g~  270 (347)
T 2hcy_A          243 INVSVS-EAAIEASTRYVRANGTTVLVGM  270 (347)
T ss_dssp             EECSSC-HHHHHHHTTSEEEEEEEEECCC
T ss_pred             EECCCc-HHHHHHHHHHHhcCCEEEEEeC
Confidence            999884 2334455555554458887764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.92  E-value=0.0021  Score=45.34  Aligned_cols=78  Identities=15%  Similarity=0.118  Sum_probs=53.1

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH--HHHHHhhhh----CCCcEEE
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSA----KGFDVVY   77 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~--~~l~~~~~~----~~~d~Vi   77 (249)
                      +|.++...++.|.+.|.+|++..|+...... .+ .........+..+..+.+|++++  +++.++++.    .+-|++|
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~-~~-~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDA-HP-DEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTS-CT-THHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccc-cc-cHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            5789999999999999999998886544211 11 11122222344566778899988  877766642    3449999


Q ss_pred             ecCCCC
Q 025702           78 DINGRE   83 (249)
Q Consensus        78 ~~~~~~   83 (249)
                      ||+|..
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.84  E-value=0.0022  Score=51.38  Aligned_cols=92  Identities=17%  Similarity=0.110  Sum_probs=61.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~Vi   77 (249)
                      +|++|.+|..+++.+...|.+|++++|++.+...         ....  +... ..|..+.+   .+.+.....++|+||
T Consensus       173 ~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~---------~~~~--ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR---------AKAL--GADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             CSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHH--TCSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHhc--CCCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            6899999999999999999999999997655211         0111  1221 23665533   333433334799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      ++++  .......++.++...+++.+++.
T Consensus       241 ~~~g--~~~~~~~~~~l~~~G~~v~~g~~  267 (343)
T 2eih_A          241 DHTG--ALYFEGVIKATANGGRIAIAGAS  267 (343)
T ss_dssp             ESSC--SSSHHHHHHHEEEEEEEEESSCC
T ss_pred             ECCC--HHHHHHHHHhhccCCEEEEEecC
Confidence            9999  35566777777744588877753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.81  E-value=0.0019  Score=51.94  Aligned_cols=91  Identities=12%  Similarity=0.074  Sum_probs=60.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|..+++.+...|.+|++++|++.+....         .+.  +.. ...|..+.+   .+.+.....++|+||
T Consensus       169 ~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---------~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA---------EKL--GAA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHH--TCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HHc--CCc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            68999999999999999999999999886542110         111  121 123555433   333333334799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +++|.  ......++.++...+++.++.
T Consensus       237 ~~~G~--~~~~~~~~~l~~~G~iv~~G~  262 (354)
T 2j8z_A          237 DCIGG--SYWEKNVNCLALDGRWVLYGL  262 (354)
T ss_dssp             ESSCG--GGHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCc--hHHHHHHHhccCCCEEEEEec
Confidence            99986  355566777774457887764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.81  E-value=0.0063  Score=48.77  Aligned_cols=91  Identities=16%  Similarity=0.222  Sum_probs=61.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+.  +... ..|..+.   +.+.+.....++|+||
T Consensus       171 ~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~~--Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vi  238 (349)
T 3pi7_A          171 TAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL---------LKDI--GAAH-VLNEKAPDFEATLREVMKAEQPRIFL  238 (349)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHH---------HHHH--TCSE-EEETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCCE-EEECCcHHHHHHHHHHhcCCCCcEEE
Confidence            5899999999999999999999999987765211         1111  1211 2244443   3344444334899999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++++.  ......++.++...+++.+++
T Consensus       239 d~~g~--~~~~~~~~~l~~~G~iv~~G~  264 (349)
T 3pi7_A          239 DAVTG--PLASAIFNAMPKRARWIIYGR  264 (349)
T ss_dssp             ESSCH--HHHHHHHHHSCTTCEEEECCC
T ss_pred             ECCCC--hhHHHHHhhhcCCCEEEEEec
Confidence            99984  345667788886678888764

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.79  E-value=0.0021  Score=51.30  Aligned_cols=91  Identities=20%  Similarity=0.227  Sum_probs=61.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+.  +... ..|..+.   +.+.+.....++|+||
T Consensus       155 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~--ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vi  222 (334)
T 3qwb_A          155 FAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI---------AKEY--GAEY-LINASKEDILRQVLKFTNGKGVDASF  222 (334)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHT--TCSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCcE-EEeCCCchHHHHHHHHhCCCCceEEE
Confidence            5889999999999999999999999997655211         0111  1211 2244433   3444444445799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++++.  ......++.++...+++.++.
T Consensus       223 d~~g~--~~~~~~~~~l~~~G~iv~~G~  248 (334)
T 3qwb_A          223 DSVGK--DTFEISLAALKRKGVFVSFGN  248 (334)
T ss_dssp             ECCGG--GGHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhccCCEEEEEcC
Confidence            99985  556667777774468887764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.78  E-value=0.0019  Score=51.33  Aligned_cols=91  Identities=15%  Similarity=0.072  Sum_probs=60.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+.  +... ..|..+.   +.+.+.....++|+||
T Consensus       147 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~--Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi  214 (325)
T 3jyn_A          147 HAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAH---------AKAL--GAWE-TIDYSHEDVAKRVLELTDGKKCPVVY  214 (325)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH---------HHHH--TCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCCE-EEeCCCccHHHHHHHHhCCCCceEEE
Confidence            5889999999999999999999999987655211         0111  1211 2244443   3444444445799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++++.  ......++.++...+++.++.
T Consensus       215 d~~g~--~~~~~~~~~l~~~G~iv~~g~  240 (325)
T 3jyn_A          215 DGVGQ--DTWLTSLDSVAPRGLVVSFGN  240 (325)
T ss_dssp             ESSCG--GGHHHHHTTEEEEEEEEECCC
T ss_pred             ECCCh--HHHHHHHHHhcCCCEEEEEec
Confidence            99985  455666666665568887764

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.76  E-value=0.00022  Score=53.01  Aligned_cols=79  Identities=16%  Similarity=0.109  Sum_probs=47.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||+|++|++++..|++.|++|++++|++..... +.       ......+.  ..|+. .+.+.+.++  ++|+||++.
T Consensus         6 iGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~-~~-------~~~~~~~~--~~~~~-~~~~~~~~~--~~D~Vi~~~   72 (212)
T 1jay_A            6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA-KA-------AEYRRIAG--DASIT-GMKNEDAAE--ACDIAVLTI   72 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH-HH-------HHHHHHHS--SCCEE-EEEHHHHHH--HCSEEEECS
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-------HHhccccc--cCCCC-hhhHHHHHh--cCCEEEEeC
Confidence            4789999999999999999999999998654211 00       00000000  01121 123445566  899999998


Q ss_pred             CCChhhhHHHHHhC
Q 025702           81 GREADEVEPILDAL   94 (249)
Q Consensus        81 ~~~~~~~~~~~~a~   94 (249)
                      ..  .....+++.+
T Consensus        73 ~~--~~~~~~~~~l   84 (212)
T 1jay_A           73 PW--EHAIDTARDL   84 (212)
T ss_dssp             CH--HHHHHHHHHT
T ss_pred             Ch--hhHHHHHHHH
Confidence            74  3344555544

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.63  E-value=0.0011  Score=54.46  Aligned_cols=67  Identities=18%  Similarity=0.266  Sum_probs=54.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+.+++.|.+.|++|+++++++......         .  ..++.++.+|.++++.|+++ ++  ++++||-+.+
T Consensus        11 G~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~---------~--~~g~~vi~GDat~~~~L~~agi~--~A~~viv~~~   77 (413)
T 3l9w_A           11 GFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL---------R--KFGMKVFYGDATRMDLLESAGAA--KAEVLINAID   77 (413)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH---------H--HTTCCCEESCTTCHHHHHHTTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH---------H--hCCCeEEEcCCCCHHHHHhcCCC--ccCEEEECCC
Confidence            458999999999999999999999997763211         1  24788899999999999877 55  8999998876


Q ss_pred             C
Q 025702           82 R   82 (249)
Q Consensus        82 ~   82 (249)
                      .
T Consensus        78 ~   78 (413)
T 3l9w_A           78 D   78 (413)
T ss_dssp             S
T ss_pred             C
Confidence            5

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.62  E-value=0.0057  Score=48.92  Aligned_cols=92  Identities=15%  Similarity=0.173  Sum_probs=58.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~~~d~Vi~~   79 (249)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+.+. -.++..+ .+ .+.+.+.....++|+||++
T Consensus       166 ~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~ga-~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          166 LGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF---------VKSVGA-DIVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHHHTC-SEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhcCC-cEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            5899999999999999999999999998765311         111111 1222222 22 2344444444479999999


Q ss_pred             CCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           80 NGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++.  ......++.++...+++.++.
T Consensus       235 ~g~--~~~~~~~~~l~~~G~iv~~G~  258 (342)
T 4eye_A          235 IGG--PAFDDAVRTLASEGRLLVVGF  258 (342)
T ss_dssp             CC----CHHHHHHTEEEEEEEEEC--
T ss_pred             Cch--hHHHHHHHhhcCCCEEEEEEc
Confidence            986  355666777774567887764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.62  E-value=0.0064  Score=49.04  Aligned_cols=92  Identities=20%  Similarity=0.159  Sum_probs=60.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|.+|..+++.+...|.+|+++++++.+...         ..+.  +... ..|..+.   +.+.+.. ..++|+||
T Consensus       170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~---------~~~~--Ga~~-~~~~~~~~~~~~~~~~~-~~g~D~vi  236 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF---------LKSL--GCDR-PINYKTEPVGTVLKQEY-PEGVDVVY  236 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHT--TCSE-EEETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HHHc--CCcE-EEecCChhHHHHHHHhc-CCCCCEEE
Confidence            5889999999999999999999999987654211         0111  2221 1244332   2233222 23799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      ++++.  ......++.++...+++.+++..
T Consensus       237 d~~g~--~~~~~~~~~l~~~G~iv~~g~~~  264 (362)
T 2c0c_A          237 ESVGG--AMFDLAVDALATKGRLIVIGFIS  264 (362)
T ss_dssp             ECSCT--HHHHHHHHHEEEEEEEEECCCGG
T ss_pred             ECCCH--HHHHHHHHHHhcCCEEEEEeCCC
Confidence            99985  45666777777445888887644

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.60  E-value=0.0011  Score=53.01  Aligned_cols=66  Identities=14%  Similarity=-0.011  Sum_probs=53.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+.+++.|.+.|+ |++++++++...  +.          ..++.++.+|.+|++.++++ ++  ++|.|+-+.+
T Consensus       122 G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~----------~~~~~~i~gd~~~~~~L~~a~i~--~a~~vi~~~~  186 (336)
T 1lnq_A          122 GWSESTLECLRELRGSEV-FVLAEDENVRKK--VL----------RSGANFVHGDPTRVSDLEKANVR--GARAVIVDLE  186 (336)
T ss_dssp             SCCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HH----------HTTCEEEESCTTSHHHHHHTCST--TEEEEEECCS
T ss_pred             CCcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HH----------hCCcEEEEeCCCCHHHHHhcChh--hccEEEEcCC
Confidence            358999999999999999 999988876532  11          25789999999999999877 66  8999998876


Q ss_pred             CC
Q 025702           82 RE   83 (249)
Q Consensus        82 ~~   83 (249)
                      .+
T Consensus       187 ~d  188 (336)
T 1lnq_A          187 SD  188 (336)
T ss_dssp             SH
T ss_pred             cc
Confidence            53

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.59  E-value=0.0062  Score=48.63  Aligned_cols=91  Identities=14%  Similarity=0.084  Sum_probs=59.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +|++|-+|...++.+...|.+|+++++++.+...         ..+.  +... ..|..+.   +.+.+.....++|+||
T Consensus       151 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~l--ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          151 NACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE---------LLRL--GAAY-VIDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHH--TCSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhC--CCcE-EEeCCcccHHHHHHHHhCCCCCcEEE
Confidence            5888899999999999899999999998765321         1111  1211 1244433   3444444445899999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++++.  ......++.++...+++.++.
T Consensus       219 d~~g~--~~~~~~~~~l~~~G~iv~~G~  244 (340)
T 3gms_A          219 DSIGG--PDGNELAFSLRPNGHFLTIGL  244 (340)
T ss_dssp             ESSCH--HHHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCC--hhHHHHHHHhcCCCEEEEEee
Confidence            99984  334455566664468887764

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.57  E-value=0.0026  Score=50.25  Aligned_cols=91  Identities=21%  Similarity=0.211  Sum_probs=54.7

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccC--ceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSS--KILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||+|++|+.++..|++.|  .++.++++++....       ...+.....  .+....    ..+.+++.++  ++|+|
T Consensus         6 iGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~-------a~dL~~~~~~~~l~~~~----~t~d~~~a~~--~aDvV   72 (314)
T 1mld_A            6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-------AADLSHIETRATVKGYL----GPEQLPDCLK--GCDVV   72 (314)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-------HHHHTTSSSSCEEEEEE----SGGGHHHHHT--TCSEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHH-------HHHHhccCcCceEEEec----CCCCHHHHhC--CCCEE
Confidence            5889999999999999888  79999999862110       001111111  121110    1234556676  99999


Q ss_pred             EecCCCCh--------------hhhHHHHHhCC---CCCeEEEee
Q 025702           77 YDINGREA--------------DEVEPILDALP---NLEQFIYCS  104 (249)
Q Consensus        77 i~~~~~~~--------------~~~~~~~~a~~---~~~~~i~~S  104 (249)
                      |++++...              ..++.+++.+.   ...++|++|
T Consensus        73 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            99987532              23455555544   234677665

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.55  E-value=0.0031  Score=50.75  Aligned_cols=93  Identities=15%  Similarity=0.163  Sum_probs=60.4

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~V   76 (249)
                      +||+|.+|..+++.+...|. +|+++++++.+....         .+ .-+.. ...|..+.+   .+.+.... ++|+|
T Consensus       167 ~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~---------~~-~~g~~-~~~d~~~~~~~~~~~~~~~~-~~d~v  234 (357)
T 2zb4_A          167 SGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILL---------TS-ELGFD-AAINYKKDNVAEQLRESCPA-GVDVY  234 (357)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH---------HH-TSCCS-EEEETTTSCHHHHHHHHCTT-CEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH---------HH-HcCCc-eEEecCchHHHHHHHHhcCC-CCCEE
Confidence            68999999999999999999 999999976442110         00 01121 124555432   33333333 79999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      |+++|.  ......++.++...+++.++...
T Consensus       235 i~~~G~--~~~~~~~~~l~~~G~iv~~G~~~  263 (357)
T 2zb4_A          235 FDNVGG--NISDTVISQMNENSHIILCGQIS  263 (357)
T ss_dssp             EESCCH--HHHHHHHHTEEEEEEEEECCCGG
T ss_pred             EECCCH--HHHHHHHHHhccCcEEEEECCcc
Confidence            999993  45556666666446888777543

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.50  E-value=0.00086  Score=53.75  Aligned_cols=92  Identities=14%  Similarity=0.202  Sum_probs=58.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH----HHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY----DFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~----~~l~~~~~~~~~d~V   76 (249)
                      +||+|.+|..+++.+...|.+|++++|++.+.....        .+.  +... ..|..+.    +.+.+... .++|+|
T Consensus       162 ~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~--------~~~--g~~~-~~d~~~~~~~~~~~~~~~~-~~~d~v  229 (345)
T 2j3h_A          162 SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK--------TKF--GFDD-AFNYKEESDLTAALKRCFP-NGIDIY  229 (345)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HTS--CCSE-EEETTSCSCSHHHHHHHCT-TCEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHc--CCce-EEecCCHHHHHHHHHHHhC-CCCcEE
Confidence            689999999999999999999999998865421100        001  1211 2355442    23333322 379999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      |++++.  ......++.++...+++.++..
T Consensus       230 i~~~g~--~~~~~~~~~l~~~G~~v~~G~~  257 (345)
T 2j3h_A          230 FENVGG--KMLDAVLVNMNMHGRIAVCGMI  257 (345)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEECCCG
T ss_pred             EECCCH--HHHHHHHHHHhcCCEEEEEccc
Confidence            999984  4455566666644578877643

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.49  E-value=0.0023  Score=50.24  Aligned_cols=87  Identities=15%  Similarity=0.160  Sum_probs=57.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~~~d~Vi~~   79 (249)
                      +|++|.+|...++.+...|.+|+++++++.+....         .+  -+... ..|..+ .+ +.+.+.  ++|+||+ 
T Consensus       132 ~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---------~~--~ga~~-~~~~~~~~~-~~~~~~--~~d~vid-  195 (302)
T 1iz0_A          132 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP---------LA--LGAEE-AATYAEVPE-RAKAWG--GLDLVLE-  195 (302)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH---------HH--TTCSE-EEEGGGHHH-HHHHTT--SEEEEEE-
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------Hh--cCCCE-EEECCcchh-HHHHhc--CceEEEE-
Confidence            58899999999999999999999999976652110         11  12221 235555 33 333334  8999999 


Q ss_pred             CCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           80 NGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++.  ......++.++...+++.++.
T Consensus       196 ~g~--~~~~~~~~~l~~~G~~v~~g~  219 (302)
T 1iz0_A          196 VRG--KEVEESLGLLAHGGRLVYIGA  219 (302)
T ss_dssp             CSC--TTHHHHHTTEEEEEEEEEC--
T ss_pred             CCH--HHHHHHHHhhccCCEEEEEeC
Confidence            876  456666777764457887664

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.46  E-value=0.02  Score=45.21  Aligned_cols=84  Identities=14%  Similarity=0.186  Sum_probs=58.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++...                .++...    ...++++++++  ++|+|+.+...
T Consensus       146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~~----~~~~~l~ell~--~aDiV~l~~Pl  203 (315)
T 3pp8_A          146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSW----------------PGVESY----VGREELRAFLN--QTRVLINLLPN  203 (315)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEEESSCCCC----------------TTCEEE----ESHHHHHHHHH--TCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEEcCCchhh----------------hhhhhh----cccCCHHHHHh--hCCEEEEecCC
Confidence            579999999999999999999999987541                122211    12367788888  99999987664


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++...-+|.+|...+
T Consensus       204 t~~t~~li~~~~l~~mk~gailIN~aRG~~  233 (315)
T 3pp8_A          204 TAQTVGIINSELLDQLPDGAYVLNLARGVH  233 (315)
T ss_dssp             CGGGTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             chhhhhhccHHHHhhCCCCCEEEECCCChh
Confidence            321    12345555665557888876655

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.39  E-value=0.0057  Score=49.17  Aligned_cols=90  Identities=18%  Similarity=0.176  Sum_probs=59.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+.+.. ..  .|..+.   +.+.+.. ..++|+||
T Consensus       174 ~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~lGa~-~~--~~~~~~~~~~~~~~~~-~~g~Dvvi  240 (353)
T 4dup_A          174 HGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA---------CERLGAK-RG--INYRSEDFAAVIKAET-GQGVDIIL  240 (353)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHHTCS-EE--EETTTSCHHHHHHHHH-SSCEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhcCCC-EE--EeCCchHHHHHHHHHh-CCCceEEE
Confidence            5899999999999999999999999988765311         0111111 12  244433   3333333 34899999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++++.  ......++.++...+++.++.
T Consensus       241 d~~g~--~~~~~~~~~l~~~G~iv~~g~  266 (353)
T 4dup_A          241 DMIGA--AYFERNIASLAKDGCLSIIAF  266 (353)
T ss_dssp             ESCCG--GGHHHHHHTEEEEEEEEECCC
T ss_pred             ECCCH--HHHHHHHHHhccCCEEEEEEe
Confidence            99985  355666677764457777764

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.33  E-value=0.023  Score=44.49  Aligned_cols=93  Identities=10%  Similarity=0.050  Sum_probs=50.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCc--hhhhhccCceEEEEeccCCHHHHHHhhhh------CCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD--QEFAEFSSKILHLKGDRKDYDFVKSSLSA------KGFD   74 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~d~~d~~~l~~~~~~------~~~d   74 (249)
                      |.|.+|..+++.|+++||+|++.+|++.+..........  ....+......++..-+.+...+++++..      ..-+
T Consensus        12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~   91 (297)
T 4gbj_A           12 GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDG   91 (297)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTC
T ss_pred             ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCe
Confidence            579999999999999999999999998875432221110  11111123344444445554444433211      1445


Q ss_pred             EEEecCCCChhhhHHHHHhCC
Q 025702           75 VVYDINGREADEVEPILDALP   95 (249)
Q Consensus        75 ~Vi~~~~~~~~~~~~~~~a~~   95 (249)
                      ++|++.......++.+.+.+.
T Consensus        92 iiid~sT~~p~~~~~~~~~~~  112 (297)
T 4gbj_A           92 VHVSMSTISPETSRQLAQVHE  112 (297)
T ss_dssp             EEEECSCCCHHHHHHHHHHHH
T ss_pred             EEEECCCCChHHHHHHHHHHH
Confidence            777777776777777666655

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.32  E-value=0.0036  Score=49.94  Aligned_cols=93  Identities=19%  Similarity=0.273  Sum_probs=60.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~Vi   77 (249)
                      +|++|-+|..+++.+...|.+|++++|++.+.....        .+  -+... ..|..+.+   .+.+.. ..++|+||
T Consensus       156 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~--------~~--~g~~~-~~~~~~~~~~~~~~~~~-~~~~d~vi  223 (336)
T 4b7c_A          156 SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV--------EE--LGFDG-AIDYKNEDLAAGLKREC-PKGIDVFF  223 (336)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HT--TCCSE-EEETTTSCHHHHHHHHC-TTCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HH--cCCCE-EEECCCHHHHHHHHHhc-CCCceEEE
Confidence            689999999999999999999999998876532110        01  12221 23554433   333332 23799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      ++++.  ......++.++...+++.++...
T Consensus       224 ~~~g~--~~~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          224 DNVGG--EILDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             ESSCH--HHHHHHHTTEEEEEEEEECCCGG
T ss_pred             ECCCc--chHHHHHHHHhhCCEEEEEeecc
Confidence            99984  45555666666446888887654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.31  E-value=0.0053  Score=48.87  Aligned_cols=91  Identities=14%  Similarity=0.248  Sum_probs=58.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH----HHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD----FVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~----~l~~~~~~~~~d~V   76 (249)
                      +||+|.+|..+++.+...|.+|++++|++......         .+.  +.. ...|..+.+    .+.+... .++|+|
T Consensus       152 ~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~---------~~~--g~~-~~~d~~~~~~~~~~~~~~~~-~~~d~v  218 (333)
T 1v3u_A          152 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL---------KQI--GFD-AAFNYKTVNSLEEALKKASP-DGYDCY  218 (333)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------HHT--TCS-EEEETTSCSCHHHHHHHHCT-TCEEEE
T ss_pred             ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------Hhc--CCc-EEEecCCHHHHHHHHHHHhC-CCCeEE
Confidence            58999999999999999999999999876542111         111  121 234665522    2233222 379999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      |+++|.  ......++.++...+++.++..
T Consensus       219 i~~~g~--~~~~~~~~~l~~~G~~v~~g~~  246 (333)
T 1v3u_A          219 FDNVGG--EFLNTVLSQMKDFGKIAICGAI  246 (333)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEECCCC
T ss_pred             EECCCh--HHHHHHHHHHhcCCEEEEEecc
Confidence            999984  3345555556644588877653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.31  E-value=0.0043  Score=49.86  Aligned_cols=90  Identities=11%  Similarity=0.135  Sum_probs=58.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHH---HHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~---l~~~~~~~~~d~Vi   77 (249)
                      +||+|.+|..+++.+...|.+|++++|++.+...         ..+.  +.. ...|..+.+.   +.+.....++|+||
T Consensus       177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~---------~~~~--ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQKI---------VLQN--GAH-EVFNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHT--TCS-EEEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH---------HHHc--CCC-EEEeCCCchHHHHHHHHcCCCCcEEEE
Confidence            5899999999999999999999999988655211         0111  121 1235555433   33333333799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      ++++.  ......++.++...+++.++
T Consensus       245 ~~~G~--~~~~~~~~~l~~~G~iv~~g  269 (351)
T 1yb5_A          245 EMLAN--VNLSKDLSLLSHGGRVIVVG  269 (351)
T ss_dssp             ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred             ECCCh--HHHHHHHHhccCCCEEEEEe
Confidence            99984  34455566666445787766

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.29  E-value=0.0067  Score=46.02  Aligned_cols=95  Identities=14%  Similarity=0.186  Sum_probs=61.5

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhh---hhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSL---SAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~---~~~~~d~V   76 (249)
                      +|++|.+|+.+++.+.+. ++++.+......+...         ...  .+.. +..|++.++...+.+   .+.+.++|
T Consensus         6 ~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~---------~~~--~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~V   73 (245)
T 1p9l_A            6 LGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSL---------LTD--GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV   73 (245)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHH---------HHH--TTCC-EEEECSCTTTHHHHHHHHHHTTCEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHH---------Hhc--cCCc-EEEEccChHHHHHHHHHHHHcCCCEE
Confidence            488999999999999876 8999877765432111         111  1233 566888776655444   23589999


Q ss_pred             EecCCCChhhhHHHHHhCC-C-CCeEEEeeccc
Q 025702           77 YDINGREADEVEPILDALP-N-LEQFIYCSSAG  107 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~-~-~~~~i~~Ss~~  107 (249)
                      +-+.|........+.++++ . ...+++.+..+
T Consensus        74 igTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~s  106 (245)
T 1p9l_A           74 VGTTGFTAERFQQVESWLVAKPNTSVLIAPNFA  106 (245)
T ss_dssp             ECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCC
T ss_pred             EcCCCCCHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence            9988877665555666665 2 44666665533

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.18  E-value=0.00057  Score=54.46  Aligned_cols=95  Identities=13%  Similarity=0.048  Sum_probs=54.5

Q ss_pred             CCCcccchHHHHHHHHHcCC--e-----EEEEecCCCc-cccCCCCCCchhhhhcc-CceEEEEeccCCHHHHHHhhhhC
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--Q-----VTLFTRGKAP-IAQQLPGESDQEFAEFS-SKILHLKGDRKDYDFVKSSLSAK   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~-----v~~~~r~~~~-~~~~~~~~~~~~~~~~~-~~v~~~~~d~~d~~~l~~~~~~~   71 (249)
                      |||+|++|++++..|...+.  +     +.++++.+.. ...    ....++.... +-..    ++...+...+.++  
T Consensus         9 ~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~----g~a~DL~~~~~~~~~----~~~~~~~~~~~~~--   78 (333)
T 5mdh_A            9 TGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLD----GVLMELQDCALPLLK----DVIATDKEEIAFK--   78 (333)
T ss_dssp             SSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHH----HHHHHHHHTCCTTEE----EEEEESCHHHHTT--
T ss_pred             ECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccch----hhHhhhHhhhhcccC----CEEEcCCcHHHhC--
Confidence            69999999999999998774  4     8888876421 000    0001111110 1111    2221223345566  


Q ss_pred             CCcEEEecCCCC--------------hhhhHHHHHhCC--CCC--eEEEeec
Q 025702           72 GFDVVYDINGRE--------------ADEVEPILDALP--NLE--QFIYCSS  105 (249)
Q Consensus        72 ~~d~Vi~~~~~~--------------~~~~~~~~~a~~--~~~--~~i~~Ss  105 (249)
                      ++|+||+++|..              ...++++++++.  ..+  ++|.+|-
T Consensus        79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            999999998853              224666777765  332  5776663

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.97  E-value=0.018  Score=44.91  Aligned_cols=81  Identities=16%  Similarity=0.041  Sum_probs=56.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++...                ..++       ..+.+.++++  .+|+|+.+...
T Consensus       129 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~-------~~~~l~ell~--~aDiV~l~~P~  183 (290)
T 3gvx_A          129 GYGGIGRRVAHLAKAFGMRVIAYTRSSVDQ----------------NVDV-------ISESPADLFR--QSDFVLIAIPL  183 (290)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSCCCT----------------TCSE-------ECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccCchhHHHHHHHHhhCcEEEEEecccccc----------------cccc-------ccCChHHHhh--ccCeEEEEeec
Confidence            568999999999999999999999986542                1111       1234556676  88999987664


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....++.++...-+|.+|+..+
T Consensus       184 t~~t~~li~~~~l~~mk~gailIN~aRG~~  213 (290)
T 3gvx_A          184 TDKTRGMVNSRLLANARKNLTIVNVARADV  213 (290)
T ss_dssp             CTTTTTCBSHHHHTTCCTTCEEEECSCGGG
T ss_pred             cccchhhhhHHHHhhhhcCceEEEeehhcc
Confidence            221    12456666775567888887664

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.96  E-value=0.026  Score=44.65  Aligned_cols=84  Identities=12%  Similarity=0.106  Sum_probs=56.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++..... +            ..  .+     ..+.+.++++  ++|+|+.+...
T Consensus       144 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~------------~~--~~-----~~~~l~ell~--~aDvV~l~lPl  201 (324)
T 3evt_A          144 GTGQIGQSLAAKASALGMHVIGVNTTGHPADH-F------------HE--TV-----AFTATADALA--TANFIVNALPL  201 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSCCCCTT-C------------SE--EE-----EGGGCHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHhCCCEEEEECCCcchhHh-H------------hh--cc-----ccCCHHHHHh--hCCEEEEcCCC
Confidence            56899999999999999999999998755211 1            01  11     1234556676  88999977654


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....++.++...-+|.+|...+
T Consensus       202 t~~t~~li~~~~l~~mk~gailIN~aRG~~  231 (324)
T 3evt_A          202 TPTTHHLFSTELFQQTKQQPMLINIGRGPA  231 (324)
T ss_dssp             CGGGTTCBSHHHHHTCCSCCEEEECSCGGG
T ss_pred             chHHHHhcCHHHHhcCCCCCEEEEcCCChh
Confidence            321    12456666775567888887665

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=95.94  E-value=0.0045  Score=49.65  Aligned_cols=91  Identities=15%  Similarity=0.206  Sum_probs=52.9

Q ss_pred             CCCcccchHHHHHHHHHcC-----C-eEEEEecCCC--ccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC
Q 025702            1 MGGTRFIGVFLSRLLVKEG-----H-QVTLFTRGKA--PIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-----~-~v~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~   71 (249)
                      +||||++|+.+++.|++++     + +++.+.+..+  +.. ...+.     +.. ...+.+  .|+ +.+    .+.  
T Consensus        15 vGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~-----l~~-~~~~~~--~~~-~~~----~~~--   79 (352)
T 2nqt_A           15 AGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPH-----LTP-LAHRVV--EPT-EAA----VLG--   79 (352)
T ss_dssp             ETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTT-----CGG-GTTCBC--EEC-CHH----HHT--
T ss_pred             ECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccc-----ccc-cceeee--ccC-CHH----Hhc--
Confidence            4999999999999999887     3 7777764332  111 11110     000 011221  122 222    244  


Q ss_pred             CCcEEEecCCCChhhhHHHHHhCCCCCeEEEeecccc
Q 025702           72 GFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        72 ~~d~Vi~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ++|+||.+.+..  ....++..++...++|-+|+..-
T Consensus        80 ~~DvVf~alg~~--~s~~~~~~~~~G~~vIDlSa~~R  114 (352)
T 2nqt_A           80 GHDAVFLALPHG--HSAVLAQQLSPETLIIDCGADFR  114 (352)
T ss_dssp             TCSEEEECCTTS--CCHHHHHHSCTTSEEEECSSTTT
T ss_pred             CCCEEEECCCCc--chHHHHHHHhCCCEEEEECCCcc
Confidence            899999998864  34555555552258888888654

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=95.89  E-value=0.012  Score=46.05  Aligned_cols=93  Identities=11%  Similarity=0.066  Sum_probs=58.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCC--chhhhhccCceEEEEeccCCHHHHHHhhhhC--------C
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--------G   72 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--------~   72 (249)
                      |.|..|..+++.|++.||+|++.+|++.+.........  .....+.....+++..-+.|.+.+++++...        .
T Consensus        10 GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~   89 (300)
T 3obb_A           10 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   89 (300)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC
T ss_pred             eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC
Confidence            57899999999999999999999999876322111000  0011111234555565666767666665421        1


Q ss_pred             CcEEEecCCCChhhhHHHHHhCC
Q 025702           73 FDVVYDINGREADEVEPILDALP   95 (249)
Q Consensus        73 ~d~Vi~~~~~~~~~~~~~~~a~~   95 (249)
                      =++||++.......++.+.+.++
T Consensus        90 g~iiId~sT~~p~~~~~~a~~~~  112 (300)
T 3obb_A           90 GTLVLECSTIAPTSARKIHAAAR  112 (300)
T ss_dssp             -CEEEECSCCCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCHHHHHHHHHHHH
Confidence            35677777777777777776655

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.88  E-value=0.0035  Score=52.32  Aligned_cols=69  Identities=14%  Similarity=0.234  Sum_probs=53.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|-+|+++++.|.++||+|+++++++......         . ..-++..+.+|.++++.|+++=- .++|.++-+.+.
T Consensus        10 G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~---------~-~~~~~~~i~Gd~~~~~~L~~Agi-~~ad~~ia~t~~   78 (461)
T 4g65_A           10 GAGQVGGTLAENLVGENNDITIVDKDGDRLREL---------Q-DKYDLRVVNGHASHPDVLHEAGA-QDADMLVAVTNT   78 (461)
T ss_dssp             CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHH---------H-HHSSCEEEESCTTCHHHHHHHTT-TTCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH---------H-HhcCcEEEEEcCCCHHHHHhcCC-CcCCEEEEEcCC
Confidence            569999999999999999999999987653211         0 01368899999999999987632 289999976654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=95.86  E-value=0.02  Score=46.30  Aligned_cols=92  Identities=15%  Similarity=0.119  Sum_probs=56.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||+|-+|...++.+...|.+|+++++ +.+. +.        ..+.  +... ..|..+.+..+++.+..++|+||+++
T Consensus       190 ~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~-~~--------~~~l--Ga~~-v~~~~~~~~~~~~~~~~g~D~vid~~  256 (375)
T 2vn8_A          190 LGASGGVGTFAIQVMKAWDAHVTAVCS-QDAS-EL--------VRKL--GADD-VIDYKSGSVEEQLKSLKPFDFILDNV  256 (375)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGH-HH--------HHHT--TCSE-EEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHH-HH--------HHHc--CCCE-EEECCchHHHHHHhhcCCCCEEEECC
Confidence            488999999999999999999998874 3221 10        1111  2221 22554433333333324899999999


Q ss_pred             CCChhhhHHHHHhCCCCCeEEEeec
Q 025702           81 GREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +.........++.++...+++.+++
T Consensus       257 g~~~~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          257 GGSTETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             CTTHHHHGGGGBCSSSCCEEEESCC
T ss_pred             CChhhhhHHHHHhhcCCcEEEEeCC
Confidence            8653333444455555568887764

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.78  E-value=0.0093  Score=48.16  Aligned_cols=90  Identities=13%  Similarity=0.140  Sum_probs=60.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|+ |-+|...++.+...|.+|+++++++.+.....        ..  -+... ..|..+.+.+.++..  ++|+||+++
T Consensus       194 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~--------~~--lGa~~-v~~~~~~~~~~~~~~--~~D~vid~~  259 (366)
T 1yqd_A          194 VGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL--------KN--FGADS-FLVSRDQEQMQAAAG--TLDGIIDTV  259 (366)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH--------HT--SCCSE-EEETTCHHHHHHTTT--CEEEEEECC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------Hh--cCCce-EEeccCHHHHHHhhC--CCCEEEECC
Confidence            364 88999999999999999999998876532110        01  12221 236667677776665  899999998


Q ss_pred             CCChhhhHHHHHhCCCCCeEEEeec
Q 025702           81 GREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +... .....++.++...+++.+++
T Consensus       260 g~~~-~~~~~~~~l~~~G~iv~~g~  283 (366)
T 1yqd_A          260 SAVH-PLLPLFGLLKSHGKLILVGA  283 (366)
T ss_dssp             SSCC-CSHHHHHHEEEEEEEEECCC
T ss_pred             CcHH-HHHHHHHHHhcCCEEEEEcc
Confidence            8532 34556677774458887774

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=95.67  E-value=0.027  Score=45.01  Aligned_cols=85  Identities=18%  Similarity=0.109  Sum_probs=48.3

Q ss_pred             CCCcccchHHHHHHHHHcCC---eEEEEec-CCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~---~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||+|++|+.+++.|+++++   +++.+.. +.....-.            ..+..+...|. +.+    .++  ++|+|
T Consensus        12 iGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~------------~~g~~i~~~~~-~~~----~~~--~~DvV   72 (340)
T 2hjs_A           12 VGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG------------FAESSLRVGDV-DSF----DFS--SVGLA   72 (340)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE------------ETTEEEECEEG-GGC----CGG--GCSEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc------------cCCcceEEecC-CHH----Hhc--CCCEE
Confidence            48999999999999997654   5555543 22111000            01122222222 221    244  89999


Q ss_pred             EecCCCChhhhHHHHHhCC--CCCeEEEeeccc
Q 025702           77 YDINGREADEVEPILDALP--NLEQFIYCSSAG  107 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~--~~~~~i~~Ss~~  107 (249)
                      |.+.+.  .....++..+.  +. ++|.+|+..
T Consensus        73 ~~a~g~--~~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           73 FFAAAA--EVSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             EEcCCc--HHHHHHHHHHHHCCC-EEEEeCCCC
Confidence            999874  33455555543  44 577777654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.65  E-value=0.03  Score=46.47  Aligned_cols=93  Identities=13%  Similarity=0.172  Sum_probs=58.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEe--ccCC----------------HH
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG--DRKD----------------YD   62 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--d~~d----------------~~   62 (249)
                      +||+|-+|...++.+...|.+|+++++++.+....         .+.+....+-..  |+.+                .+
T Consensus       227 ~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~---------~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          227 WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV---------RALGCDLVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence            58899999999999999999999999865542110         111111111111  1100                23


Q ss_pred             HHHHhhhhCCCcEEEecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           63 FVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        63 ~l~~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .+.+.. ..++|+||++++.  ......+..++...+++.+++
T Consensus       298 ~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  337 (447)
T 4a0s_A          298 LVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGGTVVTCGS  337 (447)
T ss_dssp             HHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTCEEEESCC
T ss_pred             HHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCCEEEEEec
Confidence            333333 3479999999985  455666777775568888774

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=95.57  E-value=0.005  Score=49.66  Aligned_cols=91  Identities=13%  Similarity=0.204  Sum_probs=58.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|+ |-+|+.+++.|...|.+|++++|++.+.... .       ......+..+   ..+.+.+.+.+.  ++|+||++.
T Consensus       173 iGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~-~-------~~~~~~~~~~---~~~~~~~~~~~~--~~DvVI~~~  238 (361)
T 1pjc_A          173 LGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYL-E-------TLFGSRVELL---YSNSAEIETAVA--EADLLIGAV  238 (361)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-H-------HHHGGGSEEE---ECCHHHHHHHHH--TCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-H-------HhhCceeEee---eCCHHHHHHHHc--CCCEEEECC
Confidence            466 8999999999999999999999987652110 0       0011122221   234456667776  899999998


Q ss_pred             CCChh-----hhHHHHHhCCCCCeEEEeec
Q 025702           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        81 ~~~~~-----~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +....     .....++.++....++.+++
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~  268 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAV  268 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence            75321     14556666774457776664

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.54  E-value=0.04  Score=43.61  Aligned_cols=90  Identities=17%  Similarity=0.159  Sum_probs=55.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH--HHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY--DFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~--~~l~~~~~~~~~d~Vi~   78 (249)
                      +|++|-+|...++.+...|.+|+++++++.+...         ..+.  +... ..|..+.  +.+.+ +...++|+||+
T Consensus       156 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~---------~~~l--Ga~~-~i~~~~~~~~~~~~-~~~~~~d~vid  222 (328)
T 1xa0_A          156 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY---------LRVL--GAKE-VLAREDVMAERIRP-LDKQRWAAAVD  222 (328)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH---------HHHT--TCSE-EEECC----------CCSCCEEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHc--CCcE-EEecCCcHHHHHHH-hcCCcccEEEE
Confidence            5889999999999999999999999998665211         1111  2221 1244433  22222 22237999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +++.  ......++.++...+++.++.
T Consensus       223 ~~g~--~~~~~~~~~l~~~G~~v~~G~  247 (328)
T 1xa0_A          223 PVGG--RTLATVLSRMRYGGAVAVSGL  247 (328)
T ss_dssp             CSTT--TTHHHHHHTEEEEEEEEECSC
T ss_pred             CCcH--HHHHHHHHhhccCCEEEEEee
Confidence            9986  355666777774457777653

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=95.50  E-value=0.041  Score=43.53  Aligned_cols=83  Identities=14%  Similarity=0.085  Sum_probs=55.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++....                .+.-.    ....+++++++  .+|+|+.+...
T Consensus       147 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------------~~~~~----~~~~~l~ell~--~aDvV~l~lPl  204 (324)
T 3hg7_A          147 GTGSIGQHIAHTGKHFGMKVLGVSRSGRERA----------------GFDQV----YQLPALNKMLA--QADVIVSVLPA  204 (324)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCT----------------TCSEE----ECGGGHHHHHH--TCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHhCCCEEEEEcCChHHhh----------------hhhcc----cccCCHHHHHh--hCCEEEEeCCC
Confidence            6789999999999999999999999874311                11000    12346777887  99999987664


Q ss_pred             ChhhhHH-----HHHhCCCCCeEEEeecccc
Q 025702           83 EADEVEP-----ILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~~~~~-----~~~a~~~~~~~i~~Ss~~v  108 (249)
                      .. .++.     .+..++...-+|.+|...+
T Consensus       205 t~-~T~~li~~~~l~~mk~gailIN~aRG~~  234 (324)
T 3hg7_A          205 TR-ETHHLFTASRFEHCKPGAILFNVGRGNA  234 (324)
T ss_dssp             CS-SSTTSBCTTTTTCSCTTCEEEECSCGGG
T ss_pred             CH-HHHHHhHHHHHhcCCCCcEEEECCCchh
Confidence            32 2222     3344444457888887665

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.48  E-value=0.013  Score=45.50  Aligned_cols=29  Identities=31%  Similarity=0.547  Sum_probs=26.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.++..|.+.|++|++.+|++..
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pef_A            8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEK   36 (287)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             eecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            56999999999999999999999998766

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.45  E-value=0.13  Score=39.12  Aligned_cols=104  Identities=16%  Similarity=0.099  Sum_probs=60.8

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC---------Cc-----hhhhhccCceEEEEe--ccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE---------SD-----QEFAEFSSKILHLKG--DRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~---------~~-----~~~~~~~~~v~~~~~--d~~d~~~l~   65 (249)
                      |.|-+|+.+++.|...|. ++++++++.-.....-...         .+     ..+....+.+++...  ++ +.+.+.
T Consensus        35 G~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~~~~~~  113 (251)
T 1zud_1           35 GLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL-TGEALK  113 (251)
T ss_dssp             CCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC-CHHHHH
T ss_pred             ccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC-CHHHHH
Confidence            346699999999999996 7777777653321111100         01     122233445544433  33 446677


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      ++++  ++|+||++... ...-..+-++|. ...++|..+..+.+|
T Consensus       114 ~~~~--~~DvVi~~~d~-~~~r~~l~~~~~~~~~p~i~~~~~g~~G  156 (251)
T 1zud_1          114 DAVA--RADVVLDCTDN-MATRQEINAACVALNTPLITASAVGFGG  156 (251)
T ss_dssp             HHHH--HCSEEEECCSS-HHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred             HHHh--cCCEEEECCCC-HHHHHHHHHHHHHhCCCEEEEeccccce
Confidence            8887  89999988763 333233344455 456788877655444

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=95.35  E-value=0.026  Score=47.02  Aligned_cols=91  Identities=12%  Similarity=0.191  Sum_probs=58.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-------------H------
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-------------Y------   61 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-------------~------   61 (249)
                      +|++|-+|...++.+...|.+|+++++++.+...         ..++  +...+ .|..+             .      
T Consensus       235 ~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~---------~~~l--Ga~~v-i~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          235 WGASGGLGSYATQFALAGGANPICVVSSPQKAEI---------CRAM--GAEAI-IDRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHH--TCCEE-EETTTTTCCSEEETTEECHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHH---------HHhh--CCcEE-EecCcCcccccccccccchHHHHHH
Confidence            5889999999999999999999999986554211         0111  12111 12221             1      


Q ss_pred             -HHHHHhhhhCCCcEEEecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           62 -DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        62 -~~l~~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                       +.+.++....++|+||+++|.  ......++.++...+++.+++
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G~iv~~G~  345 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGGTITTCAS  345 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEEEEEESCC
T ss_pred             HHHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCcEEEEEec
Confidence             344444443589999999985  556666777774457777664

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.23  E-value=0.1  Score=39.68  Aligned_cols=103  Identities=11%  Similarity=0.100  Sum_probs=60.4

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC---------Cc-----hhhhhccCce--EEEEeccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE---------SD-----QEFAEFSSKI--LHLKGDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~---------~~-----~~~~~~~~~v--~~~~~d~~d~~~l~   65 (249)
                      |.|-+|+.+++.|...|. ++++++++.-.....-...         .+     ..+....+.+  +.+..++. .+.+.
T Consensus        38 G~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~  116 (249)
T 1jw9_B           38 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-DAELA  116 (249)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-HHHHH
T ss_pred             eeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-HhHHH
Confidence            457799999999999996 8888888863311110000         01     1222333444  44444454 45667


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeeccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVY  109 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~  109 (249)
                      +.++  ++|+||.+... ...-..+.+++. ...++|+.+..+.+
T Consensus       117 ~~~~--~~DvVi~~~d~-~~~~~~l~~~~~~~~~p~i~~~~~g~~  158 (249)
T 1jw9_B          117 ALIA--EHDLVLDCTDN-VAVRNQLNAGCFAAKVPLVSGAAIRME  158 (249)
T ss_dssp             HHHH--TSSEEEECCSS-HHHHHHHHHHHHHHTCCEEEEEEEBTE
T ss_pred             HHHh--CCCEEEEeCCC-HHHHHHHHHHHHHcCCCEEEeeeccce
Confidence            7787  99999998764 332233444455 34567776654433

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=95.21  E-value=0.055  Score=42.58  Aligned_cols=79  Identities=16%  Similarity=0.100  Sum_probs=53.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++...                .      .+.   ..+.++++  .+|+|+.+...
T Consensus       151 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~----------------~------~~~---~~l~ell~--~aDvV~l~~p~  203 (311)
T 2cuk_A          151 GMGRIGQAVAKRALAFGMRVVYHARTPKPL----------------P------YPF---LSLEELLK--EADVVSLHTPL  203 (311)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS----------------S------SCB---CCHHHHHH--HCSEEEECCCC
T ss_pred             EECHHHHHHHHHHHHCCCEEEEECCCCccc----------------c------ccc---CCHHHHHh--hCCEEEEeCCC
Confidence            569999999999999999999999886541                1      122   23456666  88999987654


Q ss_pred             Chh--h--hHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~--~--~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...  .  ....+..++...-+|.+|+..+
T Consensus       204 ~~~t~~li~~~~l~~mk~ga~lin~srg~~  233 (311)
T 2cuk_A          204 TPETHRLLNRERLFAMKRGAILLNTARGAL  233 (311)
T ss_dssp             CTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             ChHHHhhcCHHHHhhCCCCcEEEECCCCCc
Confidence            321  1  1245555665557888887554

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.20  E-value=0.038  Score=44.04  Aligned_cols=81  Identities=17%  Similarity=0.063  Sum_probs=52.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++...                .+...       ..++.++++  .+|+|+.+...
T Consensus       178 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~~~~-------~~sl~ell~--~aDvVil~vP~  232 (340)
T 4dgs_A          178 GLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VDWIA-------HQSPVDLAR--DSDVLAVCVAA  232 (340)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SCCEE-------CSSHHHHHH--TCSEEEECC--
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cCcee-------cCCHHHHHh--cCCEEEEeCCC
Confidence            568999999999999999999999886541                11111       124556777  89999977653


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....++.++...-+|.+|...+
T Consensus       233 t~~t~~li~~~~l~~mk~gailIN~aRG~v  262 (340)
T 4dgs_A          233 SAATQNIVDASLLQALGPEGIVVNVARGNV  262 (340)
T ss_dssp             --------CHHHHHHTTTTCEEEECSCC--
T ss_pred             CHHHHHHhhHHHHhcCCCCCEEEECCCCcc
Confidence            211    12345566775567888887665

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.18  E-value=0.026  Score=44.49  Aligned_cols=74  Identities=11%  Similarity=0.128  Sum_probs=48.8

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCcc--ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPI--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +|+ |-+|++++..|.+.|. +|+++.|++...  ...+.    ..+.. ..+..+...++.+.+.+.+.+.  ++|+||
T Consensus       160 lGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la----~~~~~-~~~~~~~~~~~~~~~~l~~~l~--~aDiII  231 (315)
T 3tnl_A          160 CGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTV----EKINS-KTDCKAQLFDIEDHEQLRKEIA--ESVIFT  231 (315)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHH----HHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEEE
T ss_pred             ECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHH----HHhhh-hcCCceEEeccchHHHHHhhhc--CCCEEE
Confidence            365 7799999999999998 899999984321  11000    01110 1123444557777777888887  899999


Q ss_pred             ecCCC
Q 025702           78 DINGR   82 (249)
Q Consensus        78 ~~~~~   82 (249)
                      ++.+.
T Consensus       232 NaTp~  236 (315)
T 3tnl_A          232 NATGV  236 (315)
T ss_dssp             ECSST
T ss_pred             ECccC
Confidence            98654

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=95.18  E-value=0.086  Score=42.05  Aligned_cols=82  Identities=16%  Similarity=0.158  Sum_probs=57.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++.+|++....              ...+.+     .   .++++++  .+|+|+.+...
T Consensus       155 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~--------------~~~~~~-----~---~l~ell~--~aDvV~l~~Pl  210 (343)
T 2yq5_A          155 GVGHIGSAVAEIFSAMGAKVIAYDVAYNPEF--------------EPFLTY-----T---DFDTVLK--EADIVSLHTPL  210 (343)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCGGG--------------TTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             ecCHHHHHHHHHHhhCCCEEEEECCChhhhh--------------hccccc-----c---CHHHHHh--cCCEEEEcCCC
Confidence            5689999999999999999999999875411              012221     1   4556676  88999977664


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++...-+|.+|...+
T Consensus       211 t~~t~~li~~~~l~~mk~gailIN~aRg~~  240 (343)
T 2yq5_A          211 FPSTENMIGEKQLKEMKKSAYLINCARGEL  240 (343)
T ss_dssp             CTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             CHHHHHHhhHHHHhhCCCCcEEEECCCChh
Confidence            221    23456677775668888887665

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=95.16  E-value=0.015  Score=46.83  Aligned_cols=87  Identities=10%  Similarity=0.083  Sum_probs=47.9

Q ss_pred             CCCcccchHHHHHHHHHcCC---eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +||||++|..|++.|.+++|   ++..+....+. -..+.          ..+.....-++. .+    .++  ++|+||
T Consensus         8 vGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa-G~~~~----------~~~~~~~~~~~~-~~----~~~--~~Dvvf   69 (366)
T 3pwk_A            8 VGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GKSLK----------FKDQDITIEETT-ET----AFE--GVDIAL   69 (366)
T ss_dssp             ETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT-TCEEE----------ETTEEEEEEECC-TT----TTT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC-CCcce----------ecCCCceEeeCC-HH----Hhc--CCCEEE
Confidence            49999999999999888765   34444322211 00000          011122222222 11    244  899999


Q ss_pred             ecCCCChhhhHHHHHhC-CCCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~-~~~~~~i~~Ss~~  107 (249)
                      .+.+.  ...+.....+ ....++|-+|+..
T Consensus        70 ~a~~~--~~s~~~a~~~~~~G~~vIDlSa~~   98 (366)
T 3pwk_A           70 FSAGS--STSAKYAPYAVKAGVVVVDNTSYF   98 (366)
T ss_dssp             ECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCCh--HhHHHHHHHHHHCCCEEEEcCCcc
Confidence            99874  4444455443 3223788888764

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.14  E-value=0.047  Score=42.67  Aligned_cols=29  Identities=24%  Similarity=0.450  Sum_probs=26.5

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~   30 (249)
                      ||.|.+|..++..|.+.|++|++++|++.
T Consensus        28 Gg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           28 GGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             cCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            57999999999999999999999998764

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.14  E-value=0.01  Score=45.79  Aligned_cols=28  Identities=18%  Similarity=0.099  Sum_probs=22.5

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRG   28 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~   28 (249)
                      +|++|.+|+.+++.+.+. ++++.++.+.
T Consensus        11 ~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A           11 AGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            588999999999998864 7888855543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=95.13  E-value=0.018  Score=46.04  Aligned_cols=92  Identities=14%  Similarity=0.151  Sum_probs=56.6

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHH---HHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDF---VKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~---l~~~~~~~~~d~V   76 (249)
                      +|++|-+|..+++.+... |.+|+++++++.+...         ..+.  +... ..|..+.+.   +.+.....++|+|
T Consensus       177 ~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~---------~~~~--g~~~-~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA---------AKRA--GADY-VINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH---------HHHH--TCSE-EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHH---------HHHh--CCCE-EecCCCccHHHHHHHHhcCCCceEE
Confidence            588889999999999999 9999999987654211         0111  1111 235544333   4444321279999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      |++++.. ......++.++...+++.++.
T Consensus       245 i~~~g~~-~~~~~~~~~l~~~G~iv~~g~  272 (347)
T 1jvb_A          245 IDLNNSE-KTLSVYPKALAKQGKYVMVGL  272 (347)
T ss_dssp             EESCCCH-HHHTTGGGGEEEEEEEEECCS
T ss_pred             EECCCCH-HHHHHHHHHHhcCCEEEEECC
Confidence            9999852 233444555554457777664

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.12  E-value=0.048  Score=44.19  Aligned_cols=61  Identities=13%  Similarity=0.126  Sum_probs=47.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |.|.+|+.+++++.+.|++|++++..+.......             --+++..|+.|.+.+.++.+  .+|+|..
T Consensus        19 G~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~~~--~~dvi~~   79 (377)
T 3orq_A           19 GGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------------AHEFIQAKYDDEKALNQLGQ--KCDVITY   79 (377)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------------CCEEEECCCCCHHHHHHHHH--hCCccee
Confidence            4588999999999999999999987765422211             12356789999999999988  7888865

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=95.06  E-value=0.082  Score=41.44  Aligned_cols=80  Identities=18%  Similarity=0.120  Sum_probs=53.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++.. .                +.       .....+.++++  .+|+|+.+...
T Consensus       131 G~G~IG~~~A~~l~~~G~~V~~~dr~~~~-~----------------~~-------~~~~~l~ell~--~aDvV~l~~P~  184 (303)
T 1qp8_A          131 GLGEIGTRVGKILAALGAQVRGFSRTPKE-G----------------PW-------RFTNSLEEALR--EARAAVCALPL  184 (303)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCC-S----------------SS-------CCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCccc-c----------------Cc-------ccCCCHHHHHh--hCCEEEEeCcC
Confidence            57999999999999999999999987651 0                00       01123445666  89999977654


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++...-+|.+|+..+
T Consensus       185 ~~~t~~~i~~~~l~~mk~gailin~srg~~  214 (303)
T 1qp8_A          185 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV  214 (303)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             chHHHHHhCHHHHhhCCCCCEEEECCCCcc
Confidence            321    11345666665567888887554

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=95.05  E-value=0.033  Score=44.47  Aligned_cols=90  Identities=17%  Similarity=0.344  Sum_probs=57.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~~~d~Vi~~   79 (249)
                      +||+|-+|...++.+...|.+|+++ +++.+..         ...+.  +...+. +-.+ .+.+.+.....++|+||++
T Consensus       157 ~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~---------~~~~l--Ga~~i~-~~~~~~~~~~~~~~~~g~D~vid~  223 (343)
T 3gaz_A          157 QGGGGGVGHVAIQIALARGARVFAT-ARGSDLE---------YVRDL--GATPID-ASREPEDYAAEHTAGQGFDLVYDT  223 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH---------HHHHH--TSEEEE-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH---------HHHHc--CCCEec-cCCCHHHHHHHHhcCCCceEEEEC
Confidence            4889999999999999999999988 5544311         11111  233322 2222 2344444444589999999


Q ss_pred             CCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           80 NGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++.  ......++.++...+++.++.
T Consensus       224 ~g~--~~~~~~~~~l~~~G~iv~~g~  247 (343)
T 3gaz_A          224 LGG--PVLDASFSAVKRFGHVVSCLG  247 (343)
T ss_dssp             SCT--HHHHHHHHHEEEEEEEEESCC
T ss_pred             CCc--HHHHHHHHHHhcCCeEEEEcc
Confidence            984  455666777774467776653

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.02  E-value=0.014  Score=46.99  Aligned_cols=29  Identities=24%  Similarity=0.371  Sum_probs=26.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..++..|.+.|++|++.+|++..
T Consensus        29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~   57 (358)
T 4e21_A           29 GLGRMGADMVRRLRKGGHECVVYDLNVNA   57 (358)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence            57999999999999999999999998765

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=94.97  E-value=0.013  Score=47.49  Aligned_cols=91  Identities=14%  Similarity=0.119  Sum_probs=60.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|+ |-+|+.+++.+...|.+|++++|++...... .       ...+..+   ..+..+.+.+.+.+.  ++|+||.+.
T Consensus       174 iG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~-~-------~~~g~~~---~~~~~~~~~l~~~l~--~aDvVi~~~  239 (377)
T 2vhw_A          174 IGA-GTAGYNAARIANGMGATVTVLDINIDKLRQL-D-------AEFCGRI---HTRYSSAYELEGAVK--RADLVIGAV  239 (377)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-H-------HHTTTSS---EEEECCHHHHHHHHH--HCSEEEECC
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-H-------HhcCCee---EeccCCHHHHHHHHc--CCCEEEECC
Confidence            365 9999999999999999999999986552110 0       0011122   123344566777777  899999987


Q ss_pred             CCChh-----hhHHHHHhCCCCCeEEEeec
Q 025702           81 GREAD-----EVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        81 ~~~~~-----~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +....     .....++.++....+|.+|.
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence            64321     14566777775568888884

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=94.97  E-value=0.014  Score=46.65  Aligned_cols=89  Identities=10%  Similarity=0.034  Sum_probs=57.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +|+ |.+|..+++.+...|.+|++++|++.+....         .+  -+... ..|..+.   +.+.+..  .++|+||
T Consensus       171 ~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---------~~--lGa~~-~~d~~~~~~~~~~~~~~--~~~d~vi  235 (339)
T 1rjw_A          171 YGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA---------KE--LGADL-VVNPLKEDAAKFMKEKV--GGVHAAV  235 (339)
T ss_dssp             ECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH---------HH--TTCSE-EECTTTSCHHHHHHHHH--SSEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---------HH--CCCCE-EecCCCccHHHHHHHHh--CCCCEEE
Confidence            477 6699999999999999999999886552110         11  12221 2355543   2333333  3899999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++++. .......++.++...+++.++.
T Consensus       236 d~~g~-~~~~~~~~~~l~~~G~~v~~g~  262 (339)
T 1rjw_A          236 VTAVS-KPAFQSAYNSIRRGGACVLVGL  262 (339)
T ss_dssp             ESSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCC-HHHHHHHHHHhhcCCEEEEecc
Confidence            99885 2345566777774457887764

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.96  E-value=0.012  Score=45.75  Aligned_cols=29  Identities=31%  Similarity=0.497  Sum_probs=26.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.++..|.+.|++|++.+|++..
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pdu_A            8 GLGIMGGPMAANLVRAGFDVTVWNRNPAK   36 (287)
T ss_dssp             CCSTTHHHHHHHHHHHTCCEEEECSSGGG
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            57999999999999999999999998766

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.93  E-value=0.018  Score=45.30  Aligned_cols=29  Identities=31%  Similarity=0.488  Sum_probs=26.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..++..|.+.|++|++.+|++..
T Consensus        28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~   56 (310)
T 3doj_A           28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSK   56 (310)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             CccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            57999999999999999999999998766

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=94.90  E-value=0.02  Score=42.54  Aligned_cols=59  Identities=22%  Similarity=0.183  Sum_probs=41.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|.+|+.++..|.+.|++|++++|++...... .          ..++...        .+.+.++  ++|+||.+...
T Consensus        35 G~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~-~----------~~g~~~~--------~~~~~~~--~~DvVi~av~~   93 (215)
T 2vns_A           35 GSGDFARSLATRLVGSGFKVVVGSRNPKRTARL-F----------PSAAQVT--------FQEEAVS--SPEVIFVAVFR   93 (215)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH-S----------BTTSEEE--------EHHHHTT--SCSEEEECSCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H----------HcCCcee--------cHHHHHh--CCCEEEECCCh
Confidence            389999999999999999999999986542211 1          1233321        2334566  89999988764

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=94.88  E-value=0.03  Score=44.83  Aligned_cols=91  Identities=13%  Similarity=0.064  Sum_probs=58.0

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~V   76 (249)
                      +|+ |.+|...++.+...|. +|+++++++.+...         ..+.  +... ..|..+.   +.+.+.....++|+|
T Consensus       174 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~---------~~~~--Ga~~-~~~~~~~~~~~~v~~~~~g~g~D~v  240 (348)
T 2d8a_A          174 TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL---------AKKV--GADY-VINPFEEDVVKEVMDITDGNGVDVF  240 (348)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH---------HHHH--TCSE-EECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH---------HHHh--CCCE-EECCCCcCHHHHHHHHcCCCCCCEE
Confidence            478 9999999999999998 99999988654211         0111  2221 1344432   233333333479999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      |++++. .......++.++...+++.+++
T Consensus       241 id~~g~-~~~~~~~~~~l~~~G~iv~~g~  268 (348)
T 2d8a_A          241 LEFSGA-PKALEQGLQAVTPAGRVSLLGL  268 (348)
T ss_dssp             EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCC-HHHHHHHHHHHhcCCEEEEEcc
Confidence            999984 2445566777774458887764

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=94.88  E-value=0.049  Score=37.30  Aligned_cols=73  Identities=11%  Similarity=0.086  Sum_probs=45.2

Q ss_pred             ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCCCh
Q 025702            5 RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREA   84 (249)
Q Consensus         5 G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~~~   84 (249)
                      |.+|+.+++.|++.|++|+.++.+....                .++. +.      .++.++.+  .+|+++-+..  .
T Consensus        27 g~~G~~~~~~L~~~G~~V~~vnp~~~~i----------------~G~~-~~------~s~~el~~--~vDlvii~vp--~   79 (138)
T 1y81_A           27 AKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLK-CY------RSVRELPK--DVDVIVFVVP--P   79 (138)
T ss_dssp             TSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEE-CB------SSGGGSCT--TCCEEEECSC--H
T ss_pred             CCHHHHHHHHHHHCCCEEEEeCCCCCeE----------------CCee-ec------CCHHHhCC--CCCEEEEEeC--H
Confidence            8899999999999999977776654221                1222 11      12233334  7899887766  3


Q ss_pred             hhhHHHHHhC-C-CCCeEEEee
Q 025702           85 DEVEPILDAL-P-NLEQFIYCS  104 (249)
Q Consensus        85 ~~~~~~~~a~-~-~~~~~i~~S  104 (249)
                      .....+++.+ . +.+.++..+
T Consensus        80 ~~v~~v~~~~~~~g~~~i~~~~  101 (138)
T 1y81_A           80 KVGLQVAKEAVEAGFKKLWFQP  101 (138)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECT
T ss_pred             HHHHHHHHHHHHcCCCEEEEcC
Confidence            5555555543 3 666655444

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=94.83  E-value=0.036  Score=44.21  Aligned_cols=86  Identities=19%  Similarity=0.145  Sum_probs=48.3

Q ss_pred             CCCcccchHHHHHHHHHcCC---eEEEEecCCC-ccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKA-PIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~---~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||||++|..|++.|.++.|   ++..++...+ ...-.+            .+.+...-+..+     ..++  ++|+|
T Consensus         7 vGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~------------~~~~~~~~~~~~-----~~~~--~~Dvv   67 (344)
T 3tz6_A            7 VGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAF------------RGQEIEVEDAET-----ADPS--GLDIA   67 (344)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEE------------TTEEEEEEETTT-----SCCT--TCSEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceee------------cCCceEEEeCCH-----HHhc--cCCEE
Confidence            49999999999999988754   4555543222 110000            111222222221     2234  89999


Q ss_pred             EecCCCChhhhHHHHHhC-CCCCeEEEeeccc
Q 025702           77 YDINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~-~~~~~~i~~Ss~~  107 (249)
                      |.+.+.  ...+.....+ ....++|-.|+..
T Consensus        68 f~a~~~--~~s~~~a~~~~~~G~~vID~Sa~~   97 (344)
T 3tz6_A           68 LFSAGS--AMSKVQAPRFAAAGVTVIDNSSAW   97 (344)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             EECCCh--HHHHHHHHHHHhCCCEEEECCCcc
Confidence            999884  3444444443 3223788888754

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=94.83  E-value=0.013  Score=48.59  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|++|..++..|.+.|++|++++|++..
T Consensus         7 G~G~vG~~~A~~la~~G~~V~~~d~~~~~   35 (436)
T 1mv8_A            7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (436)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            57999999999999999999999998765

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=94.79  E-value=0.069  Score=41.89  Aligned_cols=27  Identities=15%  Similarity=0.219  Sum_probs=24.7

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~   30 (249)
                      ||..|.+++++++++|++|+.+++..+
T Consensus        64 SGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           64 SGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            599999999999999999999999654

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=94.79  E-value=0.054  Score=43.26  Aligned_cols=84  Identities=15%  Similarity=0.105  Sum_probs=56.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|...|.+|++.+|++.....             ..++.+       .+.++++++  .+|+|+.+...
T Consensus       180 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-------------~~g~~~-------~~~l~ell~--~sDvV~l~~Pl  237 (345)
T 4g2n_A          180 GMGRIGRAIATRARGFGLAIHYHNRTRLSHAL-------------EEGAIY-------HDTLDSLLG--ASDIFLIAAPG  237 (345)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEECSSCCCHHH-------------HTTCEE-------CSSHHHHHH--TCSEEEECSCC
T ss_pred             EeChhHHHHHHHHHHCCCEEEEECCCCcchhh-------------hcCCeE-------eCCHHHHHh--hCCEEEEecCC
Confidence            57899999999999999999999998644110             012221       134567777  89999977665


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++...-||.+|...+
T Consensus       238 t~~T~~li~~~~l~~mk~gailIN~aRG~~  267 (345)
T 4g2n_A          238 RPELKGFLDHDRIAKIPEGAVVINISRGDL  267 (345)
T ss_dssp             CGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence            322    12456666775567888886665

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=94.79  E-value=0.036  Score=45.92  Aligned_cols=30  Identities=23%  Similarity=0.447  Sum_probs=28.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |+|++|..++..|.+.||+|++++|++.+.
T Consensus        15 GlG~vG~~~A~~La~~G~~V~~~D~~~~kv   44 (446)
T 4a7p_A           15 GTGYVGLVSGACFSDFGHEVVCVDKDARKI   44 (446)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            679999999999999999999999998874

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=94.78  E-value=0.22  Score=40.38  Aligned_cols=62  Identities=15%  Similarity=0.142  Sum_probs=46.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |+|.+|+.+++++.+.|++|++++.++........             -..+..++.|.+.+.++++  .+|+|...
T Consensus        21 G~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~a-------------d~~~~~~~~d~~~l~~~~~--~~dvI~~~   82 (389)
T 3q2o_A           21 GGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVA-------------DIEIVASYDDLKAIQHLAE--ISDVVTYE   82 (389)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTC-------------SEEEECCTTCHHHHHHHHH--TCSEEEES
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhC-------------CceEecCcCCHHHHHHHHH--hCCEeeec
Confidence            45789999999999999999999877654222221             1244578899999999998  78988643

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=94.76  E-value=0.036  Score=42.85  Aligned_cols=61  Identities=16%  Similarity=0.157  Sum_probs=43.0

Q ss_pred             CCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |+ |-+|+.++..|.+.|. +|+++.|+..+... +.           .++..     ...+++.+.++  ++|+||++.
T Consensus       124 Ga-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~-la-----------~~~~~-----~~~~~~~~~~~--~aDiVInaT  183 (277)
T 3don_A          124 GA-GGASKGIANELYKIVRPTLTVANRTMSRFNN-WS-----------LNINK-----INLSHAESHLD--EFDIIINTT  183 (277)
T ss_dssp             CC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT-CC-----------SCCEE-----ECHHHHHHTGG--GCSEEEECC
T ss_pred             CC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HH-----------Hhccc-----ccHhhHHHHhc--CCCEEEECc
Confidence            54 7799999999999998 89999999776322 22           12221     13455666676  899999986


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      +.
T Consensus       184 p~  185 (277)
T 3don_A          184 PA  185 (277)
T ss_dssp             C-
T ss_pred             cC
Confidence            64

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=94.74  E-value=0.04  Score=44.07  Aligned_cols=91  Identities=11%  Similarity=-0.008  Sum_probs=50.6

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      .||+|++|+.+++.|.+++ .+++.+.+..... ..+... ...+    .+..  ...+.+.+   + +.  ++|+||.+
T Consensus        10 iGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~-~~~~----~g~~--~~~~~~~~---~-~~--~vDvV~~a   75 (345)
T 2ozp_A           10 VGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFV-HPNL----RGRT--NLKFVPPE---K-LE--PADILVLA   75 (345)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGT-CGGG----TTTC--CCBCBCGG---G-CC--CCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHh-Cchh----cCcc--cccccchh---H-hc--CCCEEEEc
Confidence            4899999999999999876 4888877643221 111000 0000    0100  01122222   2 34  89999999


Q ss_pred             CCCChhhhHHHHHh-CCCCCeEEEeeccc
Q 025702           80 NGREADEVEPILDA-LPNLEQFIYCSSAG  107 (249)
Q Consensus        80 ~~~~~~~~~~~~~a-~~~~~~~i~~Ss~~  107 (249)
                      .+...  ...++.. ++...++|-+|+..
T Consensus        76 ~g~~~--s~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           76 LPHGV--FAREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             CCTTH--HHHTHHHHHTTCSEEEECSSTT
T ss_pred             CCcHH--HHHHHHHHHHCCCEEEEcCccc
Confidence            88643  3444433 34334688888754

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=94.74  E-value=0.012  Score=48.82  Aligned_cols=29  Identities=14%  Similarity=0.351  Sum_probs=26.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|++|..++..|.+.|++|++++|++..
T Consensus         9 G~G~vG~~lA~~La~~G~~V~~~D~~~~~   37 (450)
T 3gg2_A            9 GIGYVGLVSATCFAELGANVRCIDTDRNK   37 (450)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence            57999999999999999999999998765

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=94.72  E-value=0.067  Score=43.02  Aligned_cols=89  Identities=17%  Similarity=0.183  Sum_probs=58.4

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccC--C-HHHHHHhhhhCCCcEEEe
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D-YDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~--d-~~~l~~~~~~~~~d~Vi~   78 (249)
                      | +|.+|...++.+...|.+|+++++++.+...         ..+.  +...+ .|..  + .+.+.+.....++|+||+
T Consensus       197 G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~v-i~~~~~~~~~~v~~~~~g~g~D~vid  263 (363)
T 3uog_A          197 G-TGGVALFGLQIAKATGAEVIVTSSSREKLDR---------AFAL--GADHG-INRLEEDWVERVYALTGDRGADHILE  263 (363)
T ss_dssp             S-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHH--TCSEE-EETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred             C-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH---------HHHc--CCCEE-EcCCcccHHHHHHHHhCCCCceEEEE
Confidence            6 7899999999999999999999988655211         1111  22211 1321  2 234455544458999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +++  .......++.++...+++.++.
T Consensus       264 ~~g--~~~~~~~~~~l~~~G~iv~~G~  288 (363)
T 3uog_A          264 IAG--GAGLGQSLKAVAPDGRISVIGV  288 (363)
T ss_dssp             ETT--SSCHHHHHHHEEEEEEEEEECC
T ss_pred             CCC--hHHHHHHHHHhhcCCEEEEEec
Confidence            998  3556667777775568887764

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=94.71  E-value=0.031  Score=44.65  Aligned_cols=90  Identities=10%  Similarity=0.071  Sum_probs=56.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~Vi~   78 (249)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+.  +...+ .|..+  .+.+.+. ...++|+||+
T Consensus       157 ~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~v-i~~~~~~~~~~~~~-~~~g~Dvv~d  223 (346)
T 3fbg_A          157 INGAGGVGSIATQIAKAYGLRVITTASRNETIEW---------TKKM--GADIV-LNHKESLLNQFKTQ-GIELVDYVFC  223 (346)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHH---------HHHH--TCSEE-ECTTSCHHHHHHHH-TCCCEEEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhc--CCcEE-EECCccHHHHHHHh-CCCCccEEEE
Confidence            3899999999999999999999999987654211         1111  12211 23332  2334443 3347999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           79 INGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      +++. .......++.++...+++.++
T Consensus       224 ~~g~-~~~~~~~~~~l~~~G~iv~~~  248 (346)
T 3fbg_A          224 TFNT-DMYYDDMIQLVKPRGHIATIV  248 (346)
T ss_dssp             SSCH-HHHHHHHHHHEEEEEEEEESS
T ss_pred             CCCc-hHHHHHHHHHhccCCEEEEEC
Confidence            9884 223356667777445777554

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.62  E-value=0.02  Score=44.76  Aligned_cols=84  Identities=18%  Similarity=0.188  Sum_probs=55.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++.+|++.+...         ..  ..+++.+     +.+.+.++++  ++|+|+.+...
T Consensus       162 G~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~---------~~--~~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  223 (293)
T 3d4o_A          162 GLGRVGMSVARKFAALGAKVKVGARESDLLAR---------IA--EMGMEPF-----HISKAAQELR--DVDVCINTIPA  223 (293)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HH--HTTSEEE-----EGGGHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCCCEEEEEECCHHHHHH---------HH--HCCCeec-----ChhhHHHHhc--CCCEEEECCCh
Confidence            46899999999999999999999998654210         00  0133322     2235667777  89999988765


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeec
Q 025702           83 EADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .... ...++.++....+|.++.
T Consensus       224 ~~i~-~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          224 LVVT-ANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             CCBC-HHHHHHSCTTCEEEECSS
T ss_pred             HHhC-HHHHHhcCCCCEEEEecC
Confidence            3322 345667775456776663

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=94.59  E-value=0.097  Score=40.82  Aligned_cols=30  Identities=13%  Similarity=0.157  Sum_probs=27.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |.|.+|+.++..|.+.|++|++.+|++...
T Consensus        22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~   51 (296)
T 3qha_A           22 GLGNMGAPMATRMTEWPGGVTVYDIRIEAM   51 (296)
T ss_dssp             CCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            579999999999999999999999998763

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=94.47  E-value=0.23  Score=39.68  Aligned_cols=91  Identities=10%  Similarity=-0.017  Sum_probs=57.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC----HHHHHHhhh---hCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLS---AKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d----~~~l~~~~~---~~~~   73 (249)
                      +|+ |-+|...++.+...|.+|+++++++.+...         ..+.  +... ..|..+    .+.+.+...   ..++
T Consensus       175 ~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~-~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          175 IGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV---------AKNC--GADV-TLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHT--TCSE-EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             ECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH---------HHHh--CCCE-EEcCcccccHHHHHHHHhccccCCCC
Confidence            365 889999999988899999999887655211         0111  2221 124332    344444442   2479


Q ss_pred             cEEEecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           74 DVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        74 d~Vi~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      |+||++++. .......++.++...+++.++.
T Consensus       242 D~vid~~g~-~~~~~~~~~~l~~~G~iv~~G~  272 (352)
T 1e3j_A          242 NVTIDCSGN-EKCITIGINITRTGGTLMLVGM  272 (352)
T ss_dssp             SEEEECSCC-HHHHHHHHHHSCTTCEEEECSC
T ss_pred             CEEEECCCC-HHHHHHHHHHHhcCCEEEEEec
Confidence            999999985 2245566777775568887763

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=94.47  E-value=0.055  Score=43.50  Aligned_cols=93  Identities=20%  Similarity=0.280  Sum_probs=51.9

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      .||+|++|+.+++.|.+++ .+++++.+..... ..+.    .....+...+   ..|+.-.+  .+.++  ++|+||.+
T Consensus        22 iGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~----~~~~~~~~~v---~~dl~~~~--~~~~~--~vDvVf~a   89 (359)
T 1xyg_A           22 LGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSME----SVFPHLRAQK---LPTLVSVK--DADFS--TVDAVFCC   89 (359)
T ss_dssp             ECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHH----HHCGGGTTSC---CCCCBCGG--GCCGG--GCSEEEEC
T ss_pred             ECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHH----HhCchhcCcc---cccceecc--hhHhc--CCCEEEEc
Confidence            4899999999999999886 4888887643221 0000    0000000111   12332222  34455  89999999


Q ss_pred             CCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           80 NGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      .+...  +......++...++|-.|+..
T Consensus        90 tp~~~--s~~~a~~~~aG~~VId~sa~~  115 (359)
T 1xyg_A           90 LPHGT--TQEIIKELPTALKIVDLSADF  115 (359)
T ss_dssp             CCTTT--HHHHHHTSCTTCEEEECSSTT
T ss_pred             CCchh--HHHHHHHHhCCCEEEECCccc
Confidence            87533  344444445223688888754

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=94.46  E-value=0.11  Score=41.24  Aligned_cols=82  Identities=13%  Similarity=0.013  Sum_probs=55.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++...   ..           ..+.     ..   .+.++++  .+|+|+.+...
T Consensus       152 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~P~  207 (333)
T 1dxy_A          152 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKG---DH-----------PDFD-----YV---SLEDLFK--QSDVIDLHVPG  207 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSS---CC-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCcchh---hH-----------hccc-----cC---CHHHHHh--cCCEEEEcCCC
Confidence            568999999999999999999999987542   11           1111     11   3456666  88999987765


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++....+|.+|+..+
T Consensus       208 ~~~t~~li~~~~l~~mk~ga~lIn~srg~~  237 (333)
T 1dxy_A          208 IEQNTHIINEAAFNLMKPGAIVINTARPNL  237 (333)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSCTTS
T ss_pred             chhHHHHhCHHHHhhCCCCcEEEECCCCcc
Confidence            321    12446677775567888886554

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=94.44  E-value=0.08  Score=42.07  Aligned_cols=81  Identities=17%  Similarity=0.130  Sum_probs=53.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++...                .++..    ..   .+.++++  ++|+|+.+...
T Consensus       171 G~G~iG~~vA~~l~~~G~~V~~~dr~~~~~----------------~g~~~----~~---~l~ell~--~aDvVil~vP~  225 (333)
T 3ba1_A          171 GLGRIGLAVAERAEAFDCPISYFSRSKKPN----------------TNYTY----YG---SVVELAS--NSDILVVACPL  225 (333)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEECSSCCTT----------------CCSEE----ES---CHHHHHH--TCSEEEECSCC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCchhc----------------cCcee----cC---CHHHHHh--cCCEEEEecCC
Confidence            569999999999999999999999886541                12211    11   3445666  89999987665


Q ss_pred             Chh--h--hHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~--~--~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...  .  ....+..++...-+|.+|+..+
T Consensus       226 ~~~t~~li~~~~l~~mk~gailIn~srG~~  255 (333)
T 3ba1_A          226 TPETTHIINREVIDALGPKGVLINIGRGPH  255 (333)
T ss_dssp             CGGGTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred             ChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence            321  1  1345556664456777776544

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=94.43  E-value=0.13  Score=42.09  Aligned_cols=62  Identities=23%  Similarity=0.249  Sum_probs=46.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |+|.+|+.+++++.+.|++|++++ .+........           .....+..|+.|.+.+.++.+  .+|+|+.
T Consensus        31 GgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a-----------d~~~~~~~~~~d~~~l~~~a~--~~d~i~~   92 (403)
T 3k5i_A           31 GGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS-----------AHDGHVTGSFKEREAVRQLAK--TCDVVTA   92 (403)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC-----------CSSCCEESCTTCHHHHHHHHT--TCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc-----------cccceeecCCCCHHHHHHHHH--hCCEEEE
Confidence            457899999999999999999999 5443222211           222456789999999999988  7888774

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.43  E-value=0.063  Score=42.66  Aligned_cols=85  Identities=18%  Similarity=0.106  Sum_probs=54.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++......         .  ..++..     .   .+.++++  ++|+|+.+...
T Consensus       162 G~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~---------~--~~g~~~-----~---~l~e~l~--~aDvVi~~vp~  220 (330)
T 2gcg_A          162 GLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA---------A--EFQAEF-----V---STPELAA--QSDFIVVACSL  220 (330)
T ss_dssp             CCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH---------H--TTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH---------H--hcCcee-----C---CHHHHHh--hCCEEEEeCCC
Confidence            469999999999999999999999876542110         0  012222     1   2445566  88999987664


Q ss_pred             Chh--h--hHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~--~--~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...  .  ...++..++...-+|.+|+..+
T Consensus       221 ~~~t~~~i~~~~~~~mk~gailIn~srg~~  250 (330)
T 2gcg_A          221 TPATEGLCNKDFFQKMKETAVFINISRGDV  250 (330)
T ss_dssp             CTTTTTCBSHHHHHHSCTTCEEEECSCGGG
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence            321  1  1456666774456777776543

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=94.42  E-value=0.047  Score=43.50  Aligned_cols=87  Identities=10%  Similarity=-0.018  Sum_probs=49.5

Q ss_pred             CCCcccchHHHHHHHHHcC---CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      .||+|++|+.+++.|++++   .+++++....+.. ..+.          ..+..+...+. +++    .++  ++|+||
T Consensus         9 ~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G-~~~~----------~~~~~i~~~~~-~~~----~~~--~vDvVf   70 (336)
T 2r00_A            9 FGATGAVGETMLEVLQEREFPVDELFLLASERSEG-KTYR----------FNGKTVRVQNV-EEF----DWS--QVHIAL   70 (336)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTT-CEEE----------ETTEEEEEEEG-GGC----CGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCC-Ccee----------ecCceeEEecC-ChH----Hhc--CCCEEE
Confidence            4899999999999999873   4677776322110 0000          01112222222 221    234  899999


Q ss_pred             ecCCCChhhhHHHHHhCC-CCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDALP-NLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~  107 (249)
                      .+.+.  .........+. ...++|-.|+..
T Consensus        71 ~a~g~--~~s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           71 FSAGG--ELSAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             ECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCCc--hHHHHHHHHHHHcCCEEEEcCCcc
Confidence            99874  33445555433 223788888764

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.38  E-value=0.091  Score=41.47  Aligned_cols=29  Identities=28%  Similarity=0.465  Sum_probs=26.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.++..|.+.|++|++.+|++..
T Consensus        38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   66 (320)
T 4dll_A           38 GTGSMGLPMARRLCEAGYALQVWNRTPAR   66 (320)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CccHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence            57999999999999999999999998765

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=94.36  E-value=0.051  Score=43.52  Aligned_cols=86  Identities=13%  Similarity=0.066  Sum_probs=57.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++.+|++......         .  ..++..       .+++.++++  .+|+|+.+...
T Consensus       171 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---------~--~~g~~~-------~~~l~ell~--~aDvV~l~~Pl  230 (351)
T 3jtm_A          171 GAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE---------K--ETGAKF-------VEDLNEMLP--KCDVIVINMPL  230 (351)
T ss_dssp             CCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH---------H--HHCCEE-------CSCHHHHGG--GCSEEEECSCC
T ss_pred             EeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH---------H--hCCCeE-------cCCHHHHHh--cCCEEEECCCC
Confidence            568999999999999999999999886442110         0  012221       134567777  89999977664


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++...-+|.+|...+
T Consensus       231 t~~t~~li~~~~l~~mk~gailIN~aRG~~  260 (351)
T 3jtm_A          231 TEKTRGMFNKELIGKLKKGVLIVNNARGAI  260 (351)
T ss_dssp             CTTTTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred             CHHHHHhhcHHHHhcCCCCCEEEECcCchh
Confidence            311    13456677775567888886554

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=94.33  E-value=0.13  Score=37.76  Aligned_cols=27  Identities=22%  Similarity=0.373  Sum_probs=24.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~   29 (249)
                      |.|.+|+.++..|.+.|++|++.+|++
T Consensus        26 G~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           26 GKGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            479999999999999999999998763

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=94.31  E-value=0.12  Score=41.80  Aligned_cols=86  Identities=17%  Similarity=0.225  Sum_probs=48.1

Q ss_pred             CCCcccchHHHHH-HHHHcC---CeEEEEecCCCccc-cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcE
Q 025702            1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~-~L~~~g---~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~   75 (249)
                      +||||++|+.|++ .|.++.   .++..++.+..... ..+.           .. ....-+..+.+.    ++  ++|+
T Consensus        10 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~-----------~~-~~~v~~~~~~~~----~~--~vDv   71 (377)
T 3uw3_A           10 VGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFA-----------KN-ETTLKDATSIDD----LK--KCDV   71 (377)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTC-----------CS-CCBCEETTCHHH----HH--TCSE
T ss_pred             ECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcC-----------CC-ceEEEeCCChhH----hc--CCCE
Confidence            4999999999999 666666   36666554322211 1111           11 111223434433    34  8999


Q ss_pred             EEecCCCChhhhHHHHHhC-C-CC-CeEEEeecc
Q 025702           76 VYDINGREADEVEPILDAL-P-NL-EQFIYCSSA  106 (249)
Q Consensus        76 Vi~~~~~~~~~~~~~~~a~-~-~~-~~~i~~Ss~  106 (249)
                      ||.+.+.  ...+.+...+ . ++ +++|=.|+.
T Consensus        72 vf~a~~~--~~s~~~~~~~~~~G~k~~VID~ss~  103 (377)
T 3uw3_A           72 IITCQGG--DYTNDVFPKLRAAGWNGYWIDAASS  103 (377)
T ss_dssp             EEECSCH--HHHHHHHHHHHHTTCCSEEEECSST
T ss_pred             EEECCCh--HHHHHHHHHHHHCCCCEEEEeCCcc
Confidence            9999884  3344444442 3 55 367766654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=94.30  E-value=0.046  Score=43.16  Aligned_cols=90  Identities=16%  Similarity=0.166  Sum_probs=57.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|++|-+|...++.+...|.+|+++++++.+...         ..++  +...+ .|..+.+.++ .+...++|+||++.
T Consensus       153 ~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~v-i~~~~~~~~~-~~~~~~~d~v~d~~  219 (324)
T 3nx4_A          153 TGASGGVGSTAVALLHKLGYQVAAVSGRESTHGY---------LKSL--GANRI-LSRDEFAESR-PLEKQLWAGAIDTV  219 (324)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH---------HHHH--TCSEE-EEGGGSSCCC-SSCCCCEEEEEESS
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH---------HHhc--CCCEE-EecCCHHHHH-hhcCCCccEEEECC
Confidence            5889999999999999999999999988765311         1111  12111 2333332222 22224799999998


Q ss_pred             CCChhhhHHHHHhCCCCCeEEEeec
Q 025702           81 GREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +.  ......++.++...+++.++.
T Consensus       220 g~--~~~~~~~~~l~~~G~iv~~G~  242 (324)
T 3nx4_A          220 GD--KVLAKVLAQMNYGGCVAACGL  242 (324)
T ss_dssp             CH--HHHHHHHHTEEEEEEEEECCC
T ss_pred             Cc--HHHHHHHHHHhcCCEEEEEec
Confidence            84  355666666664568887764

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=94.29  E-value=0.079  Score=41.73  Aligned_cols=84  Identities=14%  Similarity=0.017  Sum_probs=55.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++.....          .  ..++..     .   .+.++++  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~----------~--~~g~~~-----~---~l~ell~--~aDvVvl~~P~  206 (313)
T 2ekl_A          149 GFGRIGTKVGIIANAMGMKVLAYDILDIREKA----------E--KINAKA-----V---SLEELLK--NSDVISLHVTV  206 (313)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH----------H--HTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCCcchhHH----------H--hcCcee-----c---CHHHHHh--hCCEEEEeccC
Confidence            56999999999999999999999988754210          0  123332     1   2445666  88999987664


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++....+|.+|+..+
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lIn~arg~~  236 (313)
T 2ekl_A          207 SKDAKPIIDYPQFELMKDNVIIVNTSRAVA  236 (313)
T ss_dssp             CTTSCCSBCHHHHHHSCTTEEEEESSCGGG
T ss_pred             ChHHHHhhCHHHHhcCCCCCEEEECCCCcc
Confidence            321    11456667775567888877554

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=94.26  E-value=0.064  Score=37.06  Aligned_cols=28  Identities=14%  Similarity=0.165  Sum_probs=23.5

Q ss_pred             CCc---ccchHHHHHHHHHcCCeEEEEecCC
Q 025702            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGK   29 (249)
Q Consensus         2 G~t---G~iG~~l~~~L~~~g~~v~~~~r~~   29 (249)
                      |++   |.+|..+++.|++.|++|+.++.+.
T Consensus        20 Gas~~~g~~G~~~~~~L~~~G~~v~~vnp~~   50 (145)
T 2duw_A           20 GASDKPDRPSYRVMKYLLDQGYHVIPVSPKV   50 (145)
T ss_dssp             SCCSCTTSHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CcCCCCCChHHHHHHHHHHCCCEEEEeCCcc
Confidence            665   7899999999999999977776654

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=94.25  E-value=0.11  Score=41.75  Aligned_cols=87  Identities=20%  Similarity=0.270  Sum_probs=47.9

Q ss_pred             CCCcccchHHHHH-HHHHcC---CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSR-LLVKEG---HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~-~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||||++|+.+++ .|.++.   .++..++.+....  .+...         .+.....-+..+.+.    ++  ++|+|
T Consensus         6 vGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~--~~~~~---------~~~~~~~~~~~~~~~----~~--~~Dvv   68 (370)
T 3pzr_A            6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGV--PAPNF---------GKDAGMLHDAFDIES----LK--QLDAV   68 (370)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCCCS---------SSCCCBCEETTCHHH----HT--TCSEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCc--CHHHh---------CCCceEEEecCChhH----hc--cCCEE
Confidence            4999999999999 666666   3666555432221  11100         011111223334333    34  89999


Q ss_pred             EecCCCChhhhHHHHHhC-C-CC-CeEEEeecc
Q 025702           77 YDINGREADEVEPILDAL-P-NL-EQFIYCSSA  106 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~-~-~~-~~~i~~Ss~  106 (249)
                      |.+.+.  ...+.+...+ . ++ +++|=.|+.
T Consensus        69 f~a~~~--~~s~~~~~~~~~~G~k~~VID~ss~   99 (370)
T 3pzr_A           69 ITCQGG--SYTEKVYPALRQAGWKGYWIDAAST   99 (370)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             EECCCh--HHHHHHHHHHHHCCCCEEEEeCCch
Confidence            999884  3344444442 3 55 366666654

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=94.23  E-value=0.46  Score=35.86  Aligned_cols=98  Identities=12%  Similarity=0.129  Sum_probs=57.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEE-EecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh-hCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~-~~~~d~Vi~   78 (249)
                      +|+ |.+|+.+++.+.+.++++.+ ++|++... ...+.  ...+.+.. +..+ ..|++.++.+...++ +.+..+|+.
T Consensus         9 iGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~-~gv~v--~~dl~~l~-~~DV-vIDft~p~a~~~~~~l~~g~~vVig   82 (243)
T 3qy9_A            9 IGY-GAMNQRVARLAEEKGHEIVGVIENTPKAT-TPYQQ--YQHIADVK-GADV-AIDFSNPNLLFPLLDEDFHLPLVVA   82 (243)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEEECSSCC---CCSCB--CSCTTTCT-TCSE-EEECSCHHHHHHHHTSCCCCCEEEC
T ss_pred             ECc-CHHHHHHHHHHHhCCCEEEEEEecCcccc-CCCce--eCCHHHHh-CCCE-EEEeCChHHHHHHHHHhcCCceEeC
Confidence            377 99999999999998777666 44544321 00000  00011111 2332 357887776655542 347889998


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +.|........+.+++++ ..+++.+-
T Consensus        83 TTG~s~e~~~~l~~aa~~-~~v~~a~N  108 (243)
T 3qy9_A           83 TTGEKEKLLNKLDELSQN-MPVFFSAN  108 (243)
T ss_dssp             CCSSHHHHHHHHHHHTTT-SEEEECSS
T ss_pred             CCCCCHHHHHHHHHHHhc-CCEEEECC
Confidence            888765555666666665 45555543

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=94.19  E-value=0.11  Score=40.83  Aligned_cols=84  Identities=17%  Similarity=0.038  Sum_probs=56.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++.....          .  ..++..     .   .+.++++  ++|+|+.+...
T Consensus       149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~----------~--~~g~~~-----~---~l~ell~--~aDvV~l~~p~  206 (307)
T 1wwk_A          149 GFGRIGYQVAKIANALGMNILLYDPYPNEERA----------K--EVNGKF-----V---DLETLLK--ESDVVTIHVPL  206 (307)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH----------H--HTTCEE-----C---CHHHHHH--HCSEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCChhhH----------h--hcCccc-----c---CHHHHHh--hCCEEEEecCC
Confidence            56999999999999999999999998754100          0  113322     1   2445666  88999987664


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++...-+|.+|+..+
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lin~arg~~  236 (307)
T 1wwk_A          207 VESTYHLINEERLKLMKKTAILINTSRGPV  236 (307)
T ss_dssp             STTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             ChHHhhhcCHHHHhcCCCCeEEEECCCCcc
Confidence            321    11346667775567888887554

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=94.17  E-value=0.024  Score=45.69  Aligned_cols=87  Identities=22%  Similarity=0.275  Sum_probs=55.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCC---CccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGK---APIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~   75 (249)
                      +|+ |-+|..+++.+...|.+|+++++++   .+.. .        ..+  -+...+  | .+  .+.+.+ .. .++|+
T Consensus       187 ~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~--------~~~--~ga~~v--~-~~~~~~~~~~-~~-~~~d~  249 (366)
T 2cdc_A          187 VGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-V--------IEE--TKTNYY--N-SSNGYDKLKD-SV-GKFDV  249 (366)
T ss_dssp             ESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-H--------HHH--HTCEEE--E-CTTCSHHHHH-HH-CCEEE
T ss_pred             ECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-H--------HHH--hCCcee--c-hHHHHHHHHH-hC-CCCCE
Confidence            478 8999999999999999999999986   3311 0        011  134443  4 33  233333 22 47999


Q ss_pred             EEecCCCChhhh-HHHHHhCCCCCeEEEeec
Q 025702           76 VYDINGREADEV-EPILDALPNLEQFIYCSS  105 (249)
Q Consensus        76 Vi~~~~~~~~~~-~~~~~a~~~~~~~i~~Ss  105 (249)
                      ||++++.. ... ...++.++...+++.++.
T Consensus       250 vid~~g~~-~~~~~~~~~~l~~~G~iv~~g~  279 (366)
T 2cdc_A          250 IIDATGAD-VNILGNVIPLLGRNGVLGLFGF  279 (366)
T ss_dssp             EEECCCCC-THHHHHHGGGEEEEEEEEECSC
T ss_pred             EEECCCCh-HHHHHHHHHHHhcCCEEEEEec
Confidence            99999853 233 556666664457887763

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=94.13  E-value=0.081  Score=42.15  Aligned_cols=89  Identities=13%  Similarity=0.096  Sum_probs=56.7

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~V   76 (249)
                      +|+ |-+|...++.+...|. +|+++++++.+... ...         .  .. ...|..+.   +.+.++. ..++|+|
T Consensus       171 ~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~-~~~---------l--a~-~v~~~~~~~~~~~~~~~~-~~g~D~v  235 (343)
T 2dq4_A          171 TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAF-ARP---------Y--AD-RLVNPLEEDLLEVVRRVT-GSGVEVL  235 (343)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGG-GTT---------T--CS-EEECTTTSCHHHHHHHHH-SSCEEEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHH---------h--HH-hccCcCccCHHHHHHHhc-CCCCCEE
Confidence            478 8999999999998998 99999988655221 110         0  11 12344432   2333332 3489999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      |++.+. .......++.++...+++.++.
T Consensus       236 id~~g~-~~~~~~~~~~l~~~G~iv~~g~  263 (343)
T 2dq4_A          236 LEFSGN-EAAIHQGLMALIPGGEARILGI  263 (343)
T ss_dssp             EECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             EECCCC-HHHHHHHHHHHhcCCEEEEEec
Confidence            999985 2345666777774457887764

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=94.09  E-value=0.027  Score=44.11  Aligned_cols=84  Identities=17%  Similarity=0.233  Sum_probs=54.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++.+|++.+...         ..+  .+++.+     +.+.+.++++  ++|+|+.+...
T Consensus       164 G~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~---------~~~--~g~~~~-----~~~~l~~~l~--~aDvVi~~~p~  225 (300)
T 2rir_A          164 GLGRTGMTIARTFAALGANVKVGARSSAHLAR---------ITE--MGLVPF-----HTDELKEHVK--DIDICINTIPS  225 (300)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHH--TTCEEE-----EGGGHHHHST--TCSEEEECCSS
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHH--CCCeEE-----chhhHHHHhh--CCCEEEECCCh
Confidence            45899999999999999999999998644210         000  123322     1234667777  89999998776


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeec
Q 025702           83 EADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .... ...++.++....+|.++.
T Consensus       226 ~~i~-~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          226 MILN-QTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             CCBC-HHHHTTSCTTCEEEECSS
T ss_pred             hhhC-HHHHHhCCCCCEEEEEeC
Confidence            4332 335566664456776663

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=94.07  E-value=0.1  Score=42.68  Aligned_cols=92  Identities=16%  Similarity=0.118  Sum_probs=57.3

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~V   76 (249)
                      +|+ |-+|...++.+...|. +|+++++++.+...         ..++  +... ..|..+   .+.+.+.....++|+|
T Consensus       220 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------~~~l--Ga~~-vi~~~~~~~~~~i~~~t~g~g~D~v  286 (404)
T 3ip1_A          220 LGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL---------AKEL--GADH-VIDPTKENFVEAVLDYTNGLGAKLF  286 (404)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH---------HHHH--TCSE-EECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH---------HHHc--CCCE-EEcCCCCCHHHHHHHHhCCCCCCEE
Confidence            366 8899999999988998 89998887655211         0111  2221 124433   2344454444579999


Q ss_pred             EecCCCChhhhHHHHHhC----CCCCeEEEeec
Q 025702           77 YDINGREADEVEPILDAL----PNLEQFIYCSS  105 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~----~~~~~~i~~Ss  105 (249)
                      |.+.+........+++++    +...+++.++.
T Consensus       287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~  319 (404)
T 3ip1_A          287 LEATGVPQLVWPQIEEVIWRARGINATVAIVAR  319 (404)
T ss_dssp             EECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred             EECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence            999987533344455555    65568887763

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=94.05  E-value=0.1  Score=42.93  Aligned_cols=61  Identities=16%  Similarity=0.130  Sum_probs=46.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |.|.+|+.++.++.+.|++|++++.++.......           .  -+.+..|+.|.+.+.++.+  ++|+|+.
T Consensus        42 G~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~-----------a--d~~~~~~~~d~~~l~~~a~--~~D~V~~  102 (419)
T 4e4t_A           42 GGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV-----------A--DRHLRAAYDDEAALAELAG--LCEAVST  102 (419)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH-----------S--SEEECCCTTCHHHHHHHHH--HCSEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhh-----------C--CEEEECCcCCHHHHHHHHh--cCCEEEE
Confidence            4588999999999999999999986654422111           1  1345688999999999886  8999984

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=94.03  E-value=0.046  Score=42.12  Aligned_cols=29  Identities=14%  Similarity=0.162  Sum_probs=23.3

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEE-ecCC
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLF-TRGK   29 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~-~r~~   29 (249)
                      +|++|.+|+.+++.+.+. ++++.++ +|+.
T Consensus        13 ~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A           13 AGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             SSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            488999999999999876 5787775 5553

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=94.02  E-value=0.043  Score=41.81  Aligned_cols=61  Identities=10%  Similarity=0.088  Sum_probs=42.0

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|..|++++..|.+.|. +|+++.|++.+... +.           ..+...  .   .+++.+.++  ++|+||++.+
T Consensus       115 GaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~-la-----------~~~~~~--~---~~~~~~~~~--~aDiVInatp  175 (253)
T 3u62_A          115 GAGGAARAVIYALLQMGVKDIWVVNRTIERAKA-LD-----------FPVKIF--S---LDQLDEVVK--KAKSLFNTTS  175 (253)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHT-CC-----------SSCEEE--E---GGGHHHHHH--TCSEEEECSS
T ss_pred             CcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HH-----------HHcccC--C---HHHHHhhhc--CCCEEEECCC
Confidence            358899999999999998 89999998766322 22           122111  2   234556666  8999999865


Q ss_pred             C
Q 025702           82 R   82 (249)
Q Consensus        82 ~   82 (249)
                      .
T Consensus       176 ~  176 (253)
T 3u62_A          176 V  176 (253)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=94.01  E-value=0.15  Score=40.47  Aligned_cols=82  Identities=11%  Similarity=0.058  Sum_probs=55.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++...   ..           ..+.     ..   .+.++++  .+|+|+.+...
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~---~~-----------~~~~-----~~---~l~ell~--~aDvV~~~~p~  208 (331)
T 1xdw_A          153 GLGRIGRVAAQIFHGMGATVIGEDVFEIKG---IE-----------DYCT-----QV---SLDEVLE--KSDIITIHAPY  208 (331)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCS---CT-----------TTCE-----EC---CHHHHHH--HCSEEEECCCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCccHH---HH-----------hccc-----cC---CHHHHHh--hCCEEEEecCC
Confidence            568999999999999999999999887542   11           1111     11   3456666  88999977554


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....++.++...-+|.+|...+
T Consensus       209 t~~t~~li~~~~l~~mk~ga~lin~srg~~  238 (331)
T 1xdw_A          209 IKENGAVVTRDFLKKMKDGAILVNCARGQL  238 (331)
T ss_dssp             CTTTCCSBCHHHHHTSCTTEEEEECSCGGG
T ss_pred             chHHHHHhCHHHHhhCCCCcEEEECCCccc
Confidence            211    12456667775567888886654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=93.99  E-value=0.033  Score=45.02  Aligned_cols=88  Identities=15%  Similarity=0.149  Sum_probs=57.3

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+ |-+|...++.+...|.+|+++++++.+...         ..+.  +... ..|..+.+.++++..  ++|+||++.+
T Consensus       202 Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~---------a~~l--Ga~~-vi~~~~~~~~~~~~~--g~Dvvid~~g  266 (369)
T 1uuf_A          202 GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA---------AKAL--GADE-VVNSRNADEMAAHLK--SFDFILNTVA  266 (369)
T ss_dssp             CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHHH--TCSE-EEETTCHHHHHTTTT--CEEEEEECCS
T ss_pred             CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCcE-EeccccHHHHHHhhc--CCCEEEECCC
Confidence            66 779999999988899999999988665211         0111  2221 235666655555543  8999999988


Q ss_pred             CChhhhHHHHHhCCCCCeEEEeec
Q 025702           82 READEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        82 ~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .. ......++.++...+++.++.
T Consensus       267 ~~-~~~~~~~~~l~~~G~iv~~G~  289 (369)
T 1uuf_A          267 AP-HNLDDFTTLLKRDGTMTLVGA  289 (369)
T ss_dssp             SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred             CH-HHHHHHHHHhccCCEEEEecc
Confidence            52 234556666664457777663

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=93.97  E-value=0.36  Score=38.67  Aligned_cols=95  Identities=14%  Similarity=0.142  Sum_probs=56.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC------HHHHHHhh--hhCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD------YDFVKSSL--SAKG   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d------~~~l~~~~--~~~~   72 (249)
                      +||+|-+|...++.+...|.+|++++++..+.....     .....+  +...+ .|..+      .+.+.++.  ...+
T Consensus       174 ~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-----~~~~~l--Ga~~v-i~~~~~~~~~~~~~i~~~t~~~~~g  245 (364)
T 1gu7_A          174 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLKEL--GATQV-ITEDQNNSREFGPTIKEWIKQSGGE  245 (364)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHHHH--TCSEE-EEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHH-----HHHHhc--CCeEE-EecCccchHHHHHHHHHHhhccCCC
Confidence            588899999999988888999999987665300000     000111  22211 13222      22344433  2347


Q ss_pred             CcEEEecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        73 ~d~Vi~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +|+||++.+.  ......++.++...+++.++.
T Consensus       246 ~Dvvid~~G~--~~~~~~~~~l~~~G~~v~~g~  276 (364)
T 1gu7_A          246 AKLALNCVGG--KSSTGIARKLNNNGLMLTYGG  276 (364)
T ss_dssp             EEEEEESSCH--HHHHHHHHTSCTTCEEEECCC
T ss_pred             ceEEEECCCc--hhHHHHHHHhccCCEEEEecC
Confidence            9999999984  333456677775568887663

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=93.94  E-value=0.021  Score=44.99  Aligned_cols=27  Identities=11%  Similarity=0.144  Sum_probs=24.9

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGK   29 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~   29 (249)
                      |.|.+|..++..|.+.|+ +|++.+|++
T Consensus        31 G~G~mG~~~A~~L~~~G~~~V~~~dr~~   58 (312)
T 3qsg_A           31 GFGEAASAIASGLRQAGAIDMAAYDAAS   58 (312)
T ss_dssp             CCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred             CccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            579999999999999999 999999974

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=93.93  E-value=0.17  Score=43.32  Aligned_cols=65  Identities=14%  Similarity=0.168  Sum_probs=52.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|-+|+++++.|.+.|++|+++++++......               ..++.+|.+|++.++++-- .++|.++-+.+.
T Consensus       355 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---------------~~~i~gD~t~~~~L~~agi-~~ad~vi~~~~~  418 (565)
T 4gx0_A          355 GHGRIGCAAAAFLDRKPVPFILIDRQESPVCND---------------HVVVYGDATVGQTLRQAGI-DRASGIIVTTND  418 (565)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---------------SCEEESCSSSSTHHHHHTT-TSCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECChHHHhhc---------------CCEEEeCCCCHHHHHhcCc-cccCEEEEECCC
Confidence            458899999999999999999999998763221               1688999999998876532 389999988876


Q ss_pred             C
Q 025702           83 E   83 (249)
Q Consensus        83 ~   83 (249)
                      +
T Consensus       419 d  419 (565)
T 4gx0_A          419 D  419 (565)
T ss_dssp             H
T ss_pred             c
Confidence            4

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=93.87  E-value=0.12  Score=41.19  Aligned_cols=84  Identities=12%  Similarity=0.068  Sum_probs=55.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|+......          .  ..+++.     .   .+.++++  ++|+|+.+...
T Consensus       172 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~----------~--~~g~~~-----~---~l~ell~--~aDvV~l~~P~  229 (335)
T 2g76_A          172 GLGRIGREVATRMQSFGMKTIGYDPIISPEVS----------A--SFGVQQ-----L---PLEEIWP--LCDFITVHTPL  229 (335)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSCHHHH----------H--HTTCEE-----C---CHHHHGG--GCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCCcchhhh----------h--hcCcee-----C---CHHHHHh--cCCEEEEecCC
Confidence            56899999999999999999999987654100          0  123321     1   3456776  89999987665


Q ss_pred             Chh--h--hHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD--E--VEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~--~--~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...  .  ....++.++...-+|.+|+..+
T Consensus       230 t~~t~~li~~~~l~~mk~gailIN~arg~v  259 (335)
T 2g76_A          230 LPSTTGLLNDNTFAQCKKGVRVVNCARGGI  259 (335)
T ss_dssp             CTTTTTSBCHHHHTTSCTTEEEEECSCTTS
T ss_pred             CHHHHHhhCHHHHhhCCCCcEEEECCCccc
Confidence            321  1  1345666665567888887554

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=93.87  E-value=0.38  Score=38.76  Aligned_cols=62  Identities=16%  Similarity=0.092  Sum_probs=46.0

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +|..|+.++++|.+.|++|++++.++......+           ..  ..+..|+.|.+.+.++++  ++|.|+...
T Consensus         9 ~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~-----------~~--~~~~~~~~d~~~l~~~~~--~~d~v~~~~   70 (380)
T 3ax6_A            9 GGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQV-----------AD--EQIVAGFFDSERIEDLVK--GSDVTTYDL   70 (380)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSTTCTTGGG-----------SS--EEEECCTTCHHHHHHHHH--TCSEEEESC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh-----------Cc--eEEECCCCCHHHHHHHHh--cCCEEEecc
Confidence            478899999999999999999987654321111           11  245678889999988886  899998644

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=93.85  E-value=0.027  Score=43.66  Aligned_cols=29  Identities=21%  Similarity=0.268  Sum_probs=26.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|.+|+.++..|.+.|++|++.+|++..
T Consensus        11 GaG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A           11 GTGVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            46999999999999999999999998765

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=93.79  E-value=0.064  Score=42.33  Aligned_cols=87  Identities=16%  Similarity=0.156  Sum_probs=56.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||+|-+|...++.+...|.+|+++++....  +        ...+.  +... ..|..+.+.+.+.+.  ++|+||++.
T Consensus       159 ~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~--~--------~~~~l--Ga~~-~i~~~~~~~~~~~~~--g~D~v~d~~  223 (321)
T 3tqh_A          159 HAGAGGVGHLAIQLAKQKGTTVITTASKRNH--A--------FLKAL--GAEQ-CINYHEEDFLLAIST--PVDAVIDLV  223 (321)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEECHHHH--H--------HHHHH--TCSE-EEETTTSCHHHHCCS--CEEEEEESS
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeccchH--H--------HHHHc--CCCE-EEeCCCcchhhhhcc--CCCEEEECC
Confidence            4889999999999999999999988754321  1        11111  2221 235555443555555  899999998


Q ss_pred             CCChhhhHHHHHhCCCCCeEEEee
Q 025702           81 GREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      +.  ......++.++...+++.++
T Consensus       224 g~--~~~~~~~~~l~~~G~iv~~g  245 (321)
T 3tqh_A          224 GG--DVGIQSIDCLKETGCIVSVP  245 (321)
T ss_dssp             CH--HHHHHHGGGEEEEEEEEECC
T ss_pred             Cc--HHHHHHHHhccCCCEEEEeC
Confidence            84  33456666666445777654

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=93.78  E-value=0.064  Score=44.83  Aligned_cols=28  Identities=21%  Similarity=0.388  Sum_probs=26.7

Q ss_pred             CcccchHHHHHHHHHc-CC-eEEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKE-GH-QVTLFTRGKA   30 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~-g~-~v~~~~r~~~   30 (249)
                      |+|++|..++..|.+. |+ +|+++++++.
T Consensus        25 GlG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           25 GMGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            6799999999999999 99 9999999988

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=93.75  E-value=0.0025  Score=44.09  Aligned_cols=82  Identities=13%  Similarity=0.105  Sum_probs=48.8

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~~   83 (249)
                      +|.+|+.+++.|.+.|++|++++|++..... +.       ...  +....  ..   +.+.+.++  ++|+||.+.+..
T Consensus        29 ~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~-~a-------~~~--~~~~~--~~---~~~~~~~~--~~Divi~at~~~   91 (144)
T 3oj0_A           29 NGMLASEIAPYFSYPQYKVTVAGRNIDHVRA-FA-------EKY--EYEYV--LI---NDIDSLIK--NNDVIITATSSK   91 (144)
T ss_dssp             CSHHHHHHGGGCCTTTCEEEEEESCHHHHHH-HH-------HHH--TCEEE--EC---SCHHHHHH--TCSEEEECSCCS
T ss_pred             CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHH-HH-------HHh--CCceE--ee---cCHHHHhc--CCCEEEEeCCCC
Confidence            5999999999999999999999998665211 00       011  12221  22   23445566  899999987754


Q ss_pred             hhhhHHHHHhCCCCCeEEEee
Q 025702           84 ADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        84 ~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      .....  .+.++....++.++
T Consensus        92 ~~~~~--~~~l~~g~~vid~~  110 (144)
T 3oj0_A           92 TPIVE--ERSLMPGKLFIDLG  110 (144)
T ss_dssp             SCSBC--GGGCCTTCEEEECC
T ss_pred             CcEee--HHHcCCCCEEEEcc
Confidence            22110  13344444555554

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=93.75  E-value=0.043  Score=44.03  Aligned_cols=89  Identities=18%  Similarity=0.135  Sum_probs=57.5

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+ |-+|...++.+...|.+|+++++++.+......        .  -+... ..|..+.+.+.+...  ++|+||++.+
T Consensus       188 Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~--------~--lGa~~-vi~~~~~~~~~~~~~--g~D~vid~~g  253 (357)
T 2cf5_A          188 GL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ--------D--LGADD-YVIGSDQAKMSELAD--SLDYVIDTVP  253 (357)
T ss_dssp             CC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT--------T--SCCSC-EEETTCHHHHHHSTT--TEEEEEECCC
T ss_pred             CC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH--------H--cCCce-eeccccHHHHHHhcC--CCCEEEECCC
Confidence            64 889999999888889999999998765321110        0  11211 135556666666554  8999999998


Q ss_pred             CChhhhHHHHHhCCCCCeEEEeec
Q 025702           82 READEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        82 ~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .. ......++.++...+++.++.
T Consensus       254 ~~-~~~~~~~~~l~~~G~iv~~G~  276 (357)
T 2cf5_A          254 VH-HALEPYLSLLKLDGKLILMGV  276 (357)
T ss_dssp             SC-CCSHHHHTTEEEEEEEEECSC
T ss_pred             Ch-HHHHHHHHHhccCCEEEEeCC
Confidence            52 234455666664457777664

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=93.73  E-value=0.08  Score=42.65  Aligned_cols=86  Identities=12%  Similarity=0.084  Sum_probs=55.2

Q ss_pred             CcccchHHHHHHHHHcCCe-EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+.+++.|...|.+ |++.+|++......         .  ..++..  .     +++.++++  .+|+|+.+..
T Consensus       171 G~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~---------~--~~g~~~--~-----~~l~ell~--~aDvV~l~~P  230 (364)
T 2j6i_A          171 GAGRIGYRVLERLVPFNPKELLYYDYQALPKDAE---------E--KVGARR--V-----ENIEELVA--QADIVTVNAP  230 (364)
T ss_dssp             CCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH---------H--HTTEEE--C-----SSHHHHHH--TCSEEEECCC
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCCccchhHH---------H--hcCcEe--c-----CCHHHHHh--cCCEEEECCC
Confidence            5699999999999999997 99999876442100         0  113321  1     23556777  8999998766


Q ss_pred             CChh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           82 READ----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        82 ~~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ....    .....+..++....+|.+|...+
T Consensus       231 ~t~~t~~li~~~~l~~mk~ga~lIn~arG~~  261 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKGAWLVNTARGAI  261 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSCGGG
T ss_pred             CChHHHHHhCHHHHhhCCCCCEEEECCCCch
Confidence            5321    12345566665557787776554

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=93.65  E-value=0.039  Score=43.74  Aligned_cols=89  Identities=18%  Similarity=0.193  Sum_probs=54.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH--HHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD--FVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~--~l~~~~~~~~~d~Vi~   78 (249)
                      +||+|-+|...++.+...|.+|+++++++.+...         ..+.  +...+ .|..+.+  .+.+ +...++|+||+
T Consensus       157 ~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~---------~~~l--Ga~~v-~~~~~~~~~~~~~-~~~~~~d~vid  223 (330)
T 1tt7_A          157 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADY---------LKQL--GASEV-ISREDVYDGTLKA-LSKQQWQGAVD  223 (330)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH---------HHHH--TCSEE-EEHHHHCSSCCCS-SCCCCEEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHc--CCcEE-EECCCchHHHHHH-hhcCCccEEEE
Confidence            4888999999999998899999999998655211         1111  12111 2332221  1111 12237999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           79 INGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      +++.  ......++.++...+++.++
T Consensus       224 ~~g~--~~~~~~~~~l~~~G~iv~~G  247 (330)
T 1tt7_A          224 PVGG--KQLASLLSKIQYGGSVAVSG  247 (330)
T ss_dssp             SCCT--HHHHHHHTTEEEEEEEEECC
T ss_pred             CCcH--HHHHHHHHhhcCCCEEEEEe
Confidence            9985  34555566666445777665

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=93.63  E-value=0.36  Score=38.68  Aligned_cols=94  Identities=12%  Similarity=0.072  Sum_probs=58.3

Q ss_pred             CCCcccchHHHHHHHHHcCCe-EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHH----HHhhhhCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ-VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV----KSSLSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l----~~~~~~~~~d~   75 (249)
                      +|+ |-+|...++.+...|.+ |+++++++.+...         ..+....+..+..|-.+.+.+    .+.....++|+
T Consensus       186 ~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~---------a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          186 CGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKF---------AKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHH---------HHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH---------HHHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence            366 88999999999889987 8888887655211         011112332233333333333    33333347999


Q ss_pred             EEecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           76 VYDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        76 Vi~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ||++.+. .......++.++...+++.++.
T Consensus       256 vid~~g~-~~~~~~~~~~l~~~G~iv~~G~  284 (363)
T 3m6i_A          256 ALECTGV-ESSIAAAIWAVKFGGKVFVIGV  284 (363)
T ss_dssp             EEECSCC-HHHHHHHHHHSCTTCEEEECCC
T ss_pred             EEECCCC-hHHHHHHHHHhcCCCEEEEEcc
Confidence            9999984 2345667777885568887763

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=93.60  E-value=0.066  Score=44.63  Aligned_cols=84  Identities=11%  Similarity=-0.098  Sum_probs=56.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|+++++++.......           ..++++        ..+.++++  .+|+|+.+.+.
T Consensus       264 G~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g~~~--------~~l~ell~--~aDiVi~~~~t  322 (479)
T 1v8b_A          264 GYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEGFNV--------VTLDEIVD--KGDFFITCTGN  322 (479)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECCSS
T ss_pred             eeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcCCEe--------cCHHHHHh--cCCEEEECCCh
Confidence            5689999999999999999999999875421110           123322        13566777  89999987543


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           83 EADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      ........++.++....+|.+++..
T Consensus       323 ~~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          323 VDVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             SSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             hhhcCHHHHhhcCCCcEEEEeCCCC
Confidence            3223445677777556788887643

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=93.60  E-value=0.025  Score=45.03  Aligned_cols=96  Identities=13%  Similarity=0.080  Sum_probs=51.0

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCc--cccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAP--IAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +|+||++|+.+++.|.++ .+++..+.++...  .-+.+.+.  ..+.....+..+.  ++.+.+   ++++  ++|+||
T Consensus        10 vGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~--~p~~~~~~~~~v~--~~~~~~---~~~~--~~Dvvf   80 (337)
T 3dr3_A           10 VGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDL--HPQLKGIVELPLQ--PMSDIS---EFSP--GVDVVF   80 (337)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHH--CGGGTTTCCCBEE--EESSGG---GTCT--TCSEEE
T ss_pred             ECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHh--CccccCccceeEe--ccCCHH---HHhc--CCCEEE
Confidence            499999999999999985 4688877655411  00000000  0000000012221  110222   2224  899999


Q ss_pred             ecCCCChhhhHHHHHhC-CCCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDAL-PNLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~-~~~~~~i~~Ss~~  107 (249)
                      .+.+.  ...+.+...+ +...++|-+|+..
T Consensus        81 ~a~p~--~~s~~~~~~~~~~g~~vIDlSa~f  109 (337)
T 3dr3_A           81 LATAH--EVSHDLAPQFLEAGCVVFDLSGAF  109 (337)
T ss_dssp             ECSCH--HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCCh--HHHHHHHHHHHHCCCEEEEcCCcc
Confidence            88774  3344555443 3334788888764

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=93.59  E-value=0.15  Score=41.75  Aligned_cols=82  Identities=17%  Similarity=0.063  Sum_probs=52.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++.+|.+....               .++.  .     .+.++++++  .+|+|+.+...
T Consensus       152 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---------------~~~~--~-----~~~l~ell~--~aDvV~l~~P~  207 (404)
T 1sc6_A          152 GYGHIGTQLGILAESLGMYVYFYDIENKLPL---------------GNAT--Q-----VQHLSDLLN--MSDVVSLHVPE  207 (404)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCC---------------TTCE--E-----CSCHHHHHH--HCSEEEECCCS
T ss_pred             eECHHHHHHHHHHHHCCCEEEEEcCCchhcc---------------CCce--e-----cCCHHHHHh--cCCEEEEccCC
Confidence            5789999999999999999999998754310               1121  1     123455666  77888866544


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++....+|.+|+..+
T Consensus       208 t~~t~~li~~~~l~~mk~ga~lIN~aRg~~  237 (404)
T 1sc6_A          208 NPSTKNMMGAKEISLMKPGSLLINASRGTV  237 (404)
T ss_dssp             STTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred             ChHHHHHhhHHHHhhcCCCeEEEECCCChH
Confidence            211    11345566665557777776654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=93.57  E-value=0.04  Score=43.20  Aligned_cols=29  Identities=31%  Similarity=0.393  Sum_probs=25.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.++..|.+.|++|++++|++..
T Consensus        10 G~G~~G~~~a~~l~~~g~~V~~~~r~~~~   38 (316)
T 2ew2_A           10 GAGAMGSRLGIMLHQGGNDVTLIDQWPAH   38 (316)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence            45999999999999999999999998654

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=93.57  E-value=0.1  Score=40.86  Aligned_cols=29  Identities=14%  Similarity=0.059  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.++..|.+.|++|++.+|++..
T Consensus        14 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~   42 (303)
T 3g0o_A           14 GLGSMGMGAARSCLRAGLSTWGADLNPQA   42 (303)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            57999999999999999999999998765

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=93.57  E-value=0.084  Score=42.62  Aligned_cols=90  Identities=10%  Similarity=0.023  Sum_probs=59.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEecc------------------CCHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR------------------KDYDFV   64 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~------------------~d~~~l   64 (249)
                      |.|-+|...++.+...|.+|++++|++......         .+  -+.+++..+.                  .+.+.+
T Consensus       191 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~---------~~--lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          191 GVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV---------RS--VGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH---------HH--TTCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HH--cCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            458999999999999999999999997653211         10  1233332211                  124567


Q ss_pred             HHhhhhCCCcEEEecCCCC-----hhhhHHHHHhCCCCCeEEEeec
Q 025702           65 KSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        65 ~~~~~~~~~d~Vi~~~~~~-----~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .+.++  ++|+||.+....     ...++.+++.++...-+|-+|.
T Consensus       260 ~e~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~  303 (381)
T 3p2y_A          260 EDAIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG  303 (381)
T ss_dssp             HHHHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence            77777  999999875321     2246788888885556776664

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=93.51  E-value=0.16  Score=40.77  Aligned_cols=89  Identities=12%  Similarity=0.094  Sum_probs=55.8

Q ss_pred             CCCcccchHHHHHHHHH-cCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|.+|...++.+.. .|.+|+++++++.+...         ..+  -+...+ .|..+  .+.+.+. ...++|+||
T Consensus       178 ~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~---------~~~--lGad~v-i~~~~~~~~~v~~~-~~~g~Dvvi  244 (363)
T 4dvj_A          178 VGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW---------VKS--LGAHHV-IDHSKPLAAEVAAL-GLGAPAFVF  244 (363)
T ss_dssp             ESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH---------HHH--TTCSEE-ECTTSCHHHHHHTT-CSCCEEEEE
T ss_pred             ECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH---------HHH--cCCCEE-EeCCCCHHHHHHHh-cCCCceEEE
Confidence            47899999999888876 58999999987655211         011  122222 23332  2333333 334799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEe
Q 025702           78 DINGREADEVEPILDALPNLEQFIYC  103 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~  103 (249)
                      ++.+. .......++.++...+++.+
T Consensus       245 d~~g~-~~~~~~~~~~l~~~G~iv~~  269 (363)
T 4dvj_A          245 STTHT-DKHAAEIADLIAPQGRFCLI  269 (363)
T ss_dssp             ECSCH-HHHHHHHHHHSCTTCEEEEC
T ss_pred             ECCCc-hhhHHHHHHHhcCCCEEEEE
Confidence            99883 22456677777755688866

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=93.49  E-value=0.065  Score=42.85  Aligned_cols=85  Identities=11%  Similarity=0.027  Sum_probs=52.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|.......          .  ..++..  .     ..+.++++  .+|+|+.+...
T Consensus       175 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~----------~--~~g~~~--~-----~~l~ell~--~aDvV~l~~P~  233 (347)
T 1mx3_A          175 GLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE----------R--ALGLQR--V-----STLQDLLF--HSDCVTLHCGL  233 (347)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH----------H--HHTCEE--C-----SSHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCCcchhhH----------h--hcCCee--c-----CCHHHHHh--cCCEEEEcCCC
Confidence            57899999999999999999999887543100          0  012221  1     13456666  78998876654


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++...-+|.+|+..+
T Consensus       234 t~~t~~li~~~~l~~mk~gailIN~arg~~  263 (347)
T 1mx3_A          234 NEHNHHLINDFTVKQMRQGAFLVNTARGGL  263 (347)
T ss_dssp             CTTCTTSBSHHHHTTSCTTEEEEECSCTTS
T ss_pred             CHHHHHHhHHHHHhcCCCCCEEEECCCChH
Confidence            211    11345555664457777776554

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=93.45  E-value=0.054  Score=42.22  Aligned_cols=29  Identities=24%  Similarity=0.378  Sum_probs=25.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.++..|.+.|++|++++|++..
T Consensus        12 G~G~~G~~~a~~l~~~g~~V~~~~~~~~~   40 (299)
T 1vpd_A           12 GLGIMGKPMSKNLLKAGYSLVVSDRNPEA   40 (299)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence            47999999999999999999999988654

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=93.43  E-value=0.4  Score=38.74  Aligned_cols=66  Identities=11%  Similarity=-0.042  Sum_probs=49.3

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      +|.+|+.+++++.+.|++|++++..+.......           ..  +.+..|..|.+.+.++++..++|.|+.....
T Consensus        19 ~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~-----------~d--~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~   84 (391)
T 1kjq_A           19 SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-----------AH--RSHVINMLDGDALRRVVELEKPHYIVPEIEA   84 (391)
T ss_dssp             CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-----------SS--EEEECCTTCHHHHHHHHHHHCCSEEEECSSC
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEECCCCCchhhh-----------cc--ceEECCCCCHHHHHHHHHHcCCCEEEECCCc
Confidence            367899999999999999999988764421111           11  3456788899999888877799999976553

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=93.38  E-value=0.005  Score=49.20  Aligned_cols=69  Identities=12%  Similarity=0.165  Sum_probs=41.6

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhc---cCceEEEEeccCCHHHHHHhhhhCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEF---SSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~d~~d~~~l~~~~~~~~~d~   75 (249)
                      +|++|++|+.++..|+..|  .+|.+++.+..+....     ..++...   ...+.+       ...+.+.++  ++|+
T Consensus        14 iGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~-----a~DL~~~~~~~~~i~~-------t~d~~~al~--dADv   79 (343)
T 3fi9_A           14 VGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGV-----AEEIRHCGFEGLNLTF-------TSDIKEALT--DAKY   79 (343)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHH-----HHHHHHHCCTTCCCEE-------ESCHHHHHT--TEEE
T ss_pred             ECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHH-----HHhhhhCcCCCCceEE-------cCCHHHHhC--CCCE
Confidence            4788999999999999988  5899999865431100     0011110   011211       123345566  9999


Q ss_pred             EEecCCCC
Q 025702           76 VYDINGRE   83 (249)
Q Consensus        76 Vi~~~~~~   83 (249)
                      ||.++|..
T Consensus        80 VvitaG~p   87 (343)
T 3fi9_A           80 IVSSGGAP   87 (343)
T ss_dssp             EEECCC--
T ss_pred             EEEccCCC
Confidence            99998863

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=93.37  E-value=0.14  Score=41.56  Aligned_cols=90  Identities=16%  Similarity=0.057  Sum_probs=56.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccC----------------------C
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK----------------------D   60 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~----------------------d   60 (249)
                      |.|-+|..+++.+...|.+|++++|++......         ..  -+..++..|..                      .
T Consensus       179 GaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~---------~~--~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          179 GVGVAGLQAIATAKRLGAVVMATDVRAATKEQV---------ES--LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH---------HH--TTCEECCC-----------------------CCH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---------HH--cCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            358999999999999999999999987652110         00  12222211111                      1


Q ss_pred             HHHHHHhhhhCCCcEEEecC---CCCh--hhhHHHHHhCCCCCeEEEeec
Q 025702           61 YDFVKSSLSAKGFDVVYDIN---GREA--DEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        61 ~~~l~~~~~~~~~d~Vi~~~---~~~~--~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .+.+.+.+.  ++|+||++.   +...  ......++.++....+|.++.
T Consensus       248 ~~~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~  295 (384)
T 1l7d_A          248 AEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  295 (384)
T ss_dssp             HHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence            233667776  899999988   4212  124667777775557777763

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=93.36  E-value=0.061  Score=42.20  Aligned_cols=29  Identities=24%  Similarity=0.621  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.+++.|.+.|++|++.+|++..
T Consensus        16 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~   44 (306)
T 3l6d_A           16 GLGAMGTIMAQVLLKQGKRVAIWNRSPGK   44 (306)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            57999999999999999999999998765

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=93.34  E-value=0.043  Score=41.84  Aligned_cols=72  Identities=11%  Similarity=0.081  Sum_probs=44.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|.+|+.++..|.+.|++|.+.+|++..... +.       ..  -++..    ..+   +.++++  ++|+||-+.. 
T Consensus        10 G~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~-~~-------~~--~g~~~----~~~---~~~~~~--~~D~Vi~~v~-   69 (259)
T 2ahr_A           10 GVGKMASAIIKGLKQTPHELIISGSSLERSKE-IA-------EQ--LALPY----AMS---HQDLID--QVDLVILGIK-   69 (259)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHH-HH-------HH--HTCCB----CSS---HHHHHH--TCSEEEECSC-
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEECCCHHHHHH-HH-------HH--cCCEe----eCC---HHHHHh--cCCEEEEEeC-
Confidence            47999999999999999999999988654211 00       00  01211    122   334455  7888887776 


Q ss_pred             ChhhhHHHHHhCC
Q 025702           83 EADEVEPILDALP   95 (249)
Q Consensus        83 ~~~~~~~~~~a~~   95 (249)
                       ......++..+.
T Consensus        70 -~~~~~~v~~~l~   81 (259)
T 2ahr_A           70 -PQLFETVLKPLH   81 (259)
T ss_dssp             -GGGHHHHHTTSC
T ss_pred             -cHhHHHHHHHhc
Confidence             344555665554

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=93.31  E-value=0.19  Score=41.13  Aligned_cols=28  Identities=21%  Similarity=0.266  Sum_probs=25.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~   30 (249)
                      |.|.+|+.+++.|...|++|++.++.+.
T Consensus       163 GlG~IG~~vA~~l~~~G~~V~~yd~~~~  190 (416)
T 3k5p_A          163 GYGNIGSQVGNLAESLGMTVRYYDTSDK  190 (416)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             eeCHHHHHHHHHHHHCCCEEEEECCcch
Confidence            5689999999999999999999998754

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=93.31  E-value=0.5  Score=37.84  Aligned_cols=100  Identities=13%  Similarity=0.117  Sum_probs=60.6

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCc--eEEEEeccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSK--ILHLKGDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~--v~~~~~d~~d~~~l~   65 (249)
                      |.|-+|+.+++.|...|. ++++++++.-.........              ....+....+.  ++.+..++.+...+.
T Consensus       125 G~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~  204 (353)
T 3h5n_A          125 GCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLH  204 (353)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGG
T ss_pred             CCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhh
Confidence            457799999999999995 7888888754421111110              01223333444  445555666555466


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHH-HhCC-CCCeEEEeecc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPIL-DALP-NLEQFIYCSSA  106 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~-~a~~-~~~~~i~~Ss~  106 (249)
                      . ++  ++|+||.+... ...++.++ ++|. ...++|+.+..
T Consensus       205 ~-~~--~~DlVvd~~Dn-~~~~r~~ln~~c~~~~~p~i~~~~~  243 (353)
T 3h5n_A          205 K-VP--EADIWVVSADH-PFNLINWVNKYCVRANQPYINAGYV  243 (353)
T ss_dssp             G-SC--CCSEEEECCCC-STTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             H-hc--cCCEEEEecCC-hHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            6 76  99999997654 33255554 4465 55678876543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=93.31  E-value=0.023  Score=45.70  Aligned_cols=90  Identities=12%  Similarity=0.061  Sum_probs=55.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH-HHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~-~~l~~~~~~~~~d~Vi~~   79 (249)
                      +|+ |-+|...++.+...|.+|+++++++.+...         ..+.  +... ..|..+. +..+++..  ++|+||++
T Consensus       186 ~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~-v~~~~~~~~~~~~~~~--~~D~vid~  250 (360)
T 1piw_A          186 VGL-GGIGSMGTLISKAMGAETYVISRSSRKRED---------AMKM--GADH-YIATLEEGDWGEKYFD--TFDLIVVC  250 (360)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHH--TCSE-EEEGGGTSCHHHHSCS--CEEEEEEC
T ss_pred             ECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---------HHHc--CCCE-EEcCcCchHHHHHhhc--CCCEEEEC
Confidence            477 899999999988889999999988766311         0111  1221 1344444 33333333  89999999


Q ss_pred             CCCC-hhhhHHHHHhCCCCCeEEEeec
Q 025702           80 NGRE-ADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        80 ~~~~-~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .+.. .......++.++...+++.++.
T Consensus       251 ~g~~~~~~~~~~~~~l~~~G~iv~~g~  277 (360)
T 1piw_A          251 ASSLTDIDFNIMPKAMKVGGRIVSISI  277 (360)
T ss_dssp             CSCSTTCCTTTGGGGEEEEEEEEECCC
T ss_pred             CCCCcHHHHHHHHHHhcCCCEEEEecC
Confidence            8851 1223344555554457776653

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=93.29  E-value=0.029  Score=44.35  Aligned_cols=27  Identities=7%  Similarity=-0.068  Sum_probs=25.4

Q ss_pred             CcccchHHHHHHHHHcC-CeEEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g-~~v~~~~r~~   29 (249)
                      |.|.+|..++..|.+.| ++|++.+|++
T Consensus        31 G~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           31 GFGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            57999999999999999 9999999986

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=93.25  E-value=0.011  Score=45.67  Aligned_cols=30  Identities=17%  Similarity=0.022  Sum_probs=26.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      +|+ |.+|+.++..|.+.|.+|+++.|+.++
T Consensus       125 iGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~  154 (271)
T 1nyt_A          125 IGA-GGASRGVLLPLLSLDCAVTITNRTVSR  154 (271)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             ECC-cHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence            476 679999999999999999999998654

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=93.23  E-value=0.06  Score=43.24  Aligned_cols=97  Identities=11%  Similarity=0.138  Sum_probs=49.0

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCc-c--ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP-I--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~-~--~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||||++|+.|++.|.++. .++..+....+. .  ....+......+.....+..+.  ++ +.+.    ++  ++|+|
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~~----~~--~vDvv   83 (359)
T 4dpk_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPKL----MD--DVDII   83 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGGG----CT--TCCEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHHH----hc--CCCEE
Confidence            5999999999999887765 466666543221 1  0100000000000000011111  11 2222    34  89999


Q ss_pred             EecCCCChhhhHHHHHhC-CCCCeEEEeecccc
Q 025702           77 YDINGREADEVEPILDAL-PNLEQFIYCSSAGV  108 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~-~~~~~~i~~Ss~~v  108 (249)
                      |.+.+...  .+.+...+ ....++|-+|+..-
T Consensus        84 f~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~R  114 (359)
T 4dpk_A           84 FSPLPQGA--AGPVEEQFAKEGFPVISNSPDHR  114 (359)
T ss_dssp             EECCCTTT--HHHHHHHHHHTTCEEEECSSTTT
T ss_pred             EECCChHH--HHHHHHHHHHCCCEEEEcCCCcc
Confidence            99988643  33444433 33347888887653

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=93.23  E-value=0.06  Score=43.24  Aligned_cols=97  Identities=11%  Similarity=0.138  Sum_probs=49.0

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCc-c--ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP-I--AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~-~--~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||||++|+.|++.|.++. .++..+....+. .  ....+......+.....+..+.  ++ +.+.    ++  ++|+|
T Consensus        13 vGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~~----~~--~vDvv   83 (359)
T 4dpl_A           13 LGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPKL----MD--DVDII   83 (359)
T ss_dssp             TTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGGG----CT--TCCEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHHH----hc--CCCEE
Confidence            5999999999999887765 466666543221 1  0100000000000000011111  11 2222    34  89999


Q ss_pred             EecCCCChhhhHHHHHhC-CCCCeEEEeecccc
Q 025702           77 YDINGREADEVEPILDAL-PNLEQFIYCSSAGV  108 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~-~~~~~~i~~Ss~~v  108 (249)
                      |.+.+...  .+.+...+ ....++|-+|+..-
T Consensus        84 f~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~R  114 (359)
T 4dpl_A           84 FSPLPQGA--AGPVEEQFAKEGFPVISNSPDHR  114 (359)
T ss_dssp             EECCCTTT--HHHHHHHHHHTTCEEEECSSTTT
T ss_pred             EECCChHH--HHHHHHHHHHCCCEEEEcCCCcc
Confidence            99988643  33444433 33347888887653

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=93.22  E-value=0.085  Score=44.17  Aligned_cols=84  Identities=11%  Similarity=-0.075  Sum_probs=57.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++++|++.......           ..++++        ..++++++  ..|+|+.+.+.
T Consensus       284 G~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G~~~--------~~l~ell~--~aDiVi~~~~t  342 (494)
T 3d64_A          284 GYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEGYRV--------VTMEYAAD--KADIFVTATGN  342 (494)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTTCEE--------CCHHHHTT--TCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcCCEe--------CCHHHHHh--cCCEEEECCCc
Confidence            4689999999999999999999999875421100           123332        13567777  89999987643


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           83 EADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      ........++.++...-+|.+++..
T Consensus       343 ~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          343 YHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             SCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             ccccCHHHHhhCCCCcEEEEcCCCc
Confidence            2233456778888556788888644

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=93.18  E-value=0.15  Score=42.77  Aligned_cols=30  Identities=23%  Similarity=0.307  Sum_probs=27.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |.|.+|..++..|.+.|++|++.+|++...
T Consensus        11 GlG~MG~~lA~~L~~~G~~V~v~dr~~~~~   40 (484)
T 4gwg_A           11 GLAVMGQNLILNMNDHGFVVCAFNRTVSKV   40 (484)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHH
T ss_pred             ChhHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            579999999999999999999999998653

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=93.16  E-value=0.047  Score=43.75  Aligned_cols=85  Identities=14%  Similarity=0.068  Sum_probs=56.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|.+|++.+|+......          .  ..+++.+       +.+.++++  ++|+|+.+...
T Consensus       167 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~----------~--~~g~~~~-------~~l~ell~--~aDiV~l~~Pl  225 (352)
T 3gg9_A          167 GYGKIGQLVAGYGRAFGMNVLVWGRENSKERA----------R--ADGFAVA-------ESKDALFE--QSDVLSVHLRL  225 (352)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSHHHHHHH----------H--HTTCEEC-------SSHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHhCCCEEEEECCCCCHHHH----------H--hcCceEe-------CCHHHHHh--hCCEEEEeccC
Confidence            56899999999999999999999987532100          0  1233321       24556676  88999977654


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++...-+|.+|...+
T Consensus       226 t~~t~~li~~~~l~~mk~gailIN~aRg~~  255 (352)
T 3gg9_A          226 NDETRSIITVADLTRMKPTALFVNTSRAEL  255 (352)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             cHHHHHhhCHHHHhhCCCCcEEEECCCchh
Confidence            321    12355666775568888887665

>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}

Probab=93.15  E-value=0.069  Score=43.21  Aligned_cols=82  Identities=21%  Similarity=0.130  Sum_probs=52.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.++..... .              .+.     ..   ..+.++++  .+|+|+.+...
T Consensus       123 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~--------------~g~-----~~---~~l~ell~--~aDvV~l~~Pl  177 (380)
T 2o4c_A          123 GAGQVGGRLVEVLRGLGWKVLVCDPPRQAR-E--------------PDG-----EF---VSLERLLA--EADVISLHTPL  177 (380)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECHHHHHH-S--------------TTS-----CC---CCHHHHHH--HCSEEEECCCC
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCChhhh-c--------------cCc-----cc---CCHHHHHH--hCCEEEEeccC
Confidence            579999999999999999999998764321 0              011     11   23455666  77888876544


Q ss_pred             Chh--------hhHHHHHhCCCCCeEEEeeccccc
Q 025702           83 EAD--------EVEPILDALPNLEQFIYCSSAGVY  109 (249)
Q Consensus        83 ~~~--------~~~~~~~a~~~~~~~i~~Ss~~v~  109 (249)
                      ...        .....+..++...-+|.+|+..+.
T Consensus       178 t~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vv  212 (380)
T 2o4c_A          178 NRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVV  212 (380)
T ss_dssp             CSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGB
T ss_pred             ccccccchhhhcCHHHHhhCCCCcEEEECCCCccc
Confidence            322        123455666644567777766553

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=93.14  E-value=0.17  Score=41.28  Aligned_cols=90  Identities=13%  Similarity=0.036  Sum_probs=59.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEec----------------cCC------
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD----------------RKD------   60 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d----------------~~d------   60 (249)
                      |.|-+|...++.+...|.+|+++++++......         ..  -+.+++..+                +++      
T Consensus       197 G~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~---------~~--~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~  265 (405)
T 4dio_A          197 GAGVAGLQAIATARRLGAVVSATDVRPAAKEQV---------AS--LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ  265 (405)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH---------HH--TTCEECCCCC-----------------CHHHHHH
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---------HH--cCCceeecccccccccccccchhhhcchhhhhhh
Confidence            458999999999999999999999998752110         00  122222211                222      


Q ss_pred             HHHHHHhhhhCCCcEEEecCCCC-----hhhhHHHHHhCCCCCeEEEeec
Q 025702           61 YDFVKSSLSAKGFDVVYDINGRE-----ADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        61 ~~~l~~~~~~~~~d~Vi~~~~~~-----~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .+.+.+.++  ++|+||.++...     ...++.+++.++...-+|-+|.
T Consensus       266 ~~~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          266 AALVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             HhHHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence            347778887  999999985422     2246788888885556776764

>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}

Probab=93.13  E-value=0.071  Score=43.08  Aligned_cols=82  Identities=18%  Similarity=0.133  Sum_probs=52.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|...|++|++.++......               ..        .....+.++++  .+|+|+.+...
T Consensus       126 GlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~---------------~~--------~~~~sl~ell~--~aDiV~l~~Pl  180 (381)
T 3oet_A          126 GVGNVGSRLQTRLEALGIRTLLCDPPRAARG---------------DE--------GDFRTLDELVQ--EADVLTFHTPL  180 (381)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECHHHHHTT---------------CC--------SCBCCHHHHHH--HCSEEEECCCC
T ss_pred             eECHHHHHHHHHHHHCCCEEEEECCChHHhc---------------cC--------cccCCHHHHHh--hCCEEEEcCcC
Confidence            5799999999999999999999987532210               00        11224556666  77888866543


Q ss_pred             Chh--------hhHHHHHhCCCCCeEEEeeccccc
Q 025702           83 EAD--------EVEPILDALPNLEQFIYCSSAGVY  109 (249)
Q Consensus        83 ~~~--------~~~~~~~a~~~~~~~i~~Ss~~v~  109 (249)
                      ...        .....++.++...-+|.+|...+.
T Consensus       181 t~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vv  215 (381)
T 3oet_A          181 YKDGPYKTLHLADETLIRRLKPGAILINACRGPVV  215 (381)
T ss_dssp             CCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGB
T ss_pred             CccccccchhhcCHHHHhcCCCCcEEEECCCCccc
Confidence            322        123456666655567777766653

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=93.13  E-value=0.028  Score=44.85  Aligned_cols=91  Identities=14%  Similarity=0.107  Sum_probs=57.4

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~~~d~Vi   77 (249)
                      +|+ |-+|...++.+...  |.+|+++++++.+...         ..+.  +... ..|..+ .+.+.++-...++|+||
T Consensus       177 ~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~---------~~~l--Ga~~-vi~~~~~~~~~~~~~~g~g~D~vi  243 (344)
T 2h6e_A          177 NGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDF---------ALEL--GADY-VSEMKDAESLINKLTDGLGASIAI  243 (344)
T ss_dssp             ECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH---------HHHH--TCSE-EECHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH---------HHHh--CCCE-EeccccchHHHHHhhcCCCccEEE
Confidence            477 89999999999888  9999999987655211         0111  1211 124444 44344443333799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++.+. .......++.++...+++.++.
T Consensus       244 d~~g~-~~~~~~~~~~l~~~G~iv~~g~  270 (344)
T 2h6e_A          244 DLVGT-EETTYNLGKLLAQEGAIILVGM  270 (344)
T ss_dssp             ESSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             ECCCC-hHHHHHHHHHhhcCCEEEEeCC
Confidence            99985 2245666777774457776653

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=93.12  E-value=0.19  Score=39.93  Aligned_cols=83  Identities=14%  Similarity=0.072  Sum_probs=55.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|++|++.+|++.+..   .           ..+     ...  +.+.++++  ++|+|+.+...
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~-----------~~~-----~~~--~~l~ell~--~aDvV~l~~p~  209 (333)
T 1j4a_A          153 GTGHIGQVFMQIMEGFGAKVITYDIFRNPEL---E-----------KKG-----YYV--DSLDDLYK--QADVISLHVPD  209 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHH---H-----------HTT-----CBC--SCHHHHHH--HCSEEEECSCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCcchhH---H-----------hhC-----eec--CCHHHHHh--hCCEEEEcCCC
Confidence            5689999999999999999999998865420   0           001     111  13556666  88999987765


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....++.++....+|.+|+..+
T Consensus       210 ~~~t~~li~~~~l~~mk~ga~lIn~arg~~  239 (333)
T 1j4a_A          210 VPANVHMINDESIAKMKQDVVIVNVSRGPL  239 (333)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred             cHHHHHHHhHHHHhhCCCCcEEEECCCCcc
Confidence            322    11345566775567888887654

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=93.11  E-value=0.1  Score=41.66  Aligned_cols=89  Identities=18%  Similarity=0.226  Sum_probs=50.2

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceE--EEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKIL--HLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +||||++|+.|++.|.++. .++..+....+. -..        +.+..+.+.  ...-+. |.+.+   ++  ++|+||
T Consensus        19 vGAtG~vG~ellrlL~~hP~~el~~l~S~~~a-G~~--------~~~~~p~~~~~l~~~~~-~~~~~---~~--~~Dvvf   83 (351)
T 1vkn_A           19 IGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKK--------LEEIFPSTLENSILSEF-DPEKV---SK--NCDVLF   83 (351)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSB--------HHHHCGGGCCCCBCBCC-CHHHH---HH--HCSEEE
T ss_pred             ECCCCHHHHHHHHHHHcCCCcEEEEEeCcccc-cCC--------hHHhChhhccCceEEeC-CHHHh---hc--CCCEEE
Confidence            4999999999999999986 466666532211 110        010001111  011111 33332   34  799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      .+.+.  ...+.+...+ ...++|=.|+..
T Consensus        84 ~alp~--~~s~~~~~~~-~g~~VIDlSsdf  110 (351)
T 1vkn_A           84 TALPA--GASYDLVREL-KGVKIIDLGADF  110 (351)
T ss_dssp             ECCST--THHHHHHTTC-CSCEEEESSSTT
T ss_pred             ECCCc--HHHHHHHHHh-CCCEEEECChhh
Confidence            98875  4445555555 445788777654

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=93.07  E-value=0.28  Score=40.34  Aligned_cols=66  Identities=18%  Similarity=0.104  Sum_probs=49.3

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      +|.+|+.+++++.+.|++|++++..+.......           .  -+.+..|+.|.+.+.++++..++|.|+.....
T Consensus        27 ~g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~-----------a--d~~~~~~~~d~~~l~~~~~~~~~d~V~~~~e~   92 (433)
T 2dwc_A           27 SGELGKEIAIEAQRLGVEVVAVDRYANAPAMQV-----------A--HRSYVGNMMDKDFLWSVVEREKPDAIIPEIEA   92 (433)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSTTCHHHHH-----------S--SEEEESCTTCHHHHHHHHHHHCCSEEEECSSC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-----------c--ceEEECCCCCHHHHHHHHHHcCCCEEEECccc
Confidence            377899999999999999999987764421100           1  13456788899999888877799999976653

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=93.01  E-value=0.082  Score=43.12  Aligned_cols=90  Identities=14%  Similarity=0.072  Sum_probs=57.2

Q ss_pred             CCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC----HHHHHHhhhhCCCcEE
Q 025702            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----YDFVKSSLSAKGFDVV   76 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d----~~~l~~~~~~~~~d~V   76 (249)
                      |+ |-+|...++.+...|. +|+++++++.+....         .+  -+..+  .|..+    .+.+.+.....++|+|
T Consensus       193 Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a---------~~--lGa~~--i~~~~~~~~~~~~~~~~~g~g~Dvv  258 (398)
T 2dph_A          193 GA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL---------SD--AGFET--IDLRNSAPLRDQIDQILGKPEVDCG  258 (398)
T ss_dssp             CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH---------HT--TTCEE--EETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH---------HH--cCCcE--EcCCCcchHHHHHHHHhCCCCCCEE
Confidence            65 8899999998888898 899999886652211         11  13343  34443    3445444443479999


Q ss_pred             EecCCCCh-------------hhhHHHHHhCCCCCeEEEeec
Q 025702           77 YDINGREA-------------DEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        77 i~~~~~~~-------------~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      |++.+...             ......++.++...+++.++.
T Consensus       259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~  300 (398)
T 2dph_A          259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI  300 (398)
T ss_dssp             EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred             EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence            99998642             235566777774457776653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=92.95  E-value=0.058  Score=43.30  Aligned_cols=88  Identities=15%  Similarity=0.158  Sum_probs=56.7

Q ss_pred             CCCcccchHHH-HHHH-HHcCCe-EEEEecCCC---ccccCCCCCCchhhhhccCceEEEEeccCCHH--HHHHhhhhCC
Q 025702            1 MGGTRFIGVFL-SRLL-VKEGHQ-VTLFTRGKA---PIAQQLPGESDQEFAEFSSKILHLKGDRKDYD--FVKSSLSAKG   72 (249)
Q Consensus         1 ~G~tG~iG~~l-~~~L-~~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~--~l~~~~~~~~   72 (249)
                      +|+ |-+|... ++.+ ...|.+ |++++++++   +...         ..  .-+...+  |..+.+  ++.++ .. +
T Consensus       179 ~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~---------~~--~lGa~~v--~~~~~~~~~i~~~-~g-g  242 (357)
T 2b5w_A          179 LGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI---------IE--ELDATYV--DSRQTPVEDVPDV-YE-Q  242 (357)
T ss_dssp             ECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH---------HH--HTTCEEE--ETTTSCGGGHHHH-SC-C
T ss_pred             ECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH---------HH--HcCCccc--CCCccCHHHHHHh-CC-C
Confidence            477 8899999 8887 777987 999999876   4211         01  1244444  554322  24444 43 7


Q ss_pred             CcEEEecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           73 FDVVYDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        73 ~d~Vi~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +|+||++.+. .......++.++...+++.++.
T Consensus       243 ~Dvvid~~g~-~~~~~~~~~~l~~~G~iv~~g~  274 (357)
T 2b5w_A          243 MDFIYEATGF-PKHAIQSVQALAPNGVGALLGV  274 (357)
T ss_dssp             EEEEEECSCC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred             CCEEEECCCC-hHHHHHHHHHHhcCCEEEEEeC
Confidence            9999999985 2245566777774457887764

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=92.94  E-value=0.23  Score=40.04  Aligned_cols=90  Identities=9%  Similarity=0.046  Sum_probs=56.5

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-----HHHHHHhhhhCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-----YDFVKSSLSAKGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-----~~~l~~~~~~~~~d   74 (249)
                      +| +|-+|...++.+...|. +|+++++++.+....         .+  -+... ..|..+     .+.+.+.... ++|
T Consensus       199 ~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~---------~~--lGa~~-vi~~~~~~~~~~~~~~~~~~~-g~D  264 (374)
T 1cdo_A          199 FG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA---------KV--FGATD-FVNPNDHSEPISQVLSKMTNG-GVD  264 (374)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---------HH--TTCCE-EECGGGCSSCHHHHHHHHHTS-CBS
T ss_pred             EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH---------HH--hCCce-EEeccccchhHHHHHHHHhCC-CCC
Confidence            36 48899999999988998 899998876653210         11  12221 124432     2233333332 799


Q ss_pred             EEEecCCCChhhhHHHHHhCCCC-CeEEEeec
Q 025702           75 VVYDINGREADEVEPILDALPNL-EQFIYCSS  105 (249)
Q Consensus        75 ~Vi~~~~~~~~~~~~~~~a~~~~-~~~i~~Ss  105 (249)
                      +||++.+. .......++.++.. .+++.++.
T Consensus       265 ~vid~~g~-~~~~~~~~~~l~~~~G~iv~~G~  295 (374)
T 1cdo_A          265 FSLECVGN-VGVMRNALESCLKGWGVSVLVGW  295 (374)
T ss_dssp             EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred             EEEECCCC-HHHHHHHHHHhhcCCcEEEEEcC
Confidence            99999985 23456667777755 78887763

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=92.94  E-value=0.094  Score=43.96  Aligned_cols=83  Identities=11%  Similarity=0.053  Sum_probs=56.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|..+++.|...|.+|+++++++.......           ..++..     .+.   .++++  ++|+||.+.+.
T Consensus       281 G~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-----------~~Ga~~-----~~l---~e~l~--~aDvVi~atgt  339 (494)
T 3ce6_A          281 GYGDVGKGCAEAMKGQGARVSVTEIDPINALQAM-----------MEGFDV-----VTV---EEAIG--DADIVVTATGN  339 (494)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCEE-----CCH---HHHGG--GCSEEEECSSS
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCCEE-----ecH---HHHHh--CCCEEEECCCC
Confidence            3599999999999999999999998875521100           123332     122   24455  89999988765


Q ss_pred             ChhhhHHHHHhCCCCCeEEEeecc
Q 025702           83 EADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      ........++.++....++.++..
T Consensus       340 ~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          340 KDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             SCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             HHHHHHHHHHhcCCCcEEEEeCCC
Confidence            433334677778855688888753

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=92.87  E-value=0.43  Score=38.09  Aligned_cols=103  Identities=16%  Similarity=0.108  Sum_probs=61.4

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccc---cCC-CC--C--------CchhhhhccCceEEE--EeccCCHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIA---QQL-PG--E--------SDQEFAEFSSKILHL--KGDRKDYDFVK   65 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~---~~~-~~--~--------~~~~~~~~~~~v~~~--~~d~~d~~~l~   65 (249)
                      |.|-+|..+++.|...|. ++++++.+.-...   ..+ ..  .        ....+.+..+.+++.  ..++.+  ...
T Consensus        43 G~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~  120 (346)
T 1y8q_A           43 GLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDIEK--KPE  120 (346)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSCGGG--CCH
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecccCc--chH
Confidence            456799999999999996 7888876543211   111 00  0        012344445555444  334432  234


Q ss_pred             HhhhhCCCcEEEecCCCChhhhHHHHHhCC-CCCeEEEeecccccc
Q 025702           66 SSLSAKGFDVVYDINGREADEVEPILDALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        66 ~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~v~~  110 (249)
                      +.++  ++|+||.+... ...-..+-++|+ ...++|..++.+.+|
T Consensus       121 ~~~~--~~dvVv~~~d~-~~~r~~ln~~~~~~~ip~i~~~~~G~~G  163 (346)
T 1y8q_A          121 SFFT--QFDAVCLTCCS-RDVIVKVDQICHKNSIKFFTGDVFGYHG  163 (346)
T ss_dssp             HHHT--TCSEEEEESCC-HHHHHHHHHHHHHTTCEEEEEEEEBTEE
T ss_pred             HHhc--CCCEEEEcCCC-HHHHHHHHHHHHHcCCCEEEEeecccEE
Confidence            5666  89999987653 333344555576 557888887777665

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=92.80  E-value=0.084  Score=41.72  Aligned_cols=85  Identities=15%  Similarity=0.096  Sum_probs=53.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEec-CCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+.+++.|...|++|++.+| ++.....          .  ..++..  .     +.+.++++  ++|+|+.+..
T Consensus       153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~----------~--~~g~~~--~-----~~l~ell~--~aDvVil~~p  211 (320)
T 1gdh_A          153 GFGSIGQALAKRAQGFDMDIDYFDTHRASSSDE----------A--SYQATF--H-----DSLDSLLS--VSQFFSLNAP  211 (320)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH----------H--HHTCEE--C-----SSHHHHHH--HCSEEEECCC
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEECCCCcChhhh----------h--hcCcEE--c-----CCHHHHHh--hCCEEEEecc
Confidence            5699999999999999999999998 7644100          0  012321  1     13456666  8899998766


Q ss_pred             CChh--h--hHHHHHhCCCCCeEEEeecccc
Q 025702           82 READ--E--VEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        82 ~~~~--~--~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ....  .  ....+..++...-+|.+|+..+
T Consensus       212 ~~~~t~~~i~~~~l~~mk~gailIn~arg~~  242 (320)
T 1gdh_A          212 STPETRYFFNKATIKSLPQGAIVVNTARGDL  242 (320)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             CchHHHhhcCHHHHhhCCCCcEEEECCCCcc
Confidence            4321  1  1335555664456777776544

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=92.74  E-value=0.033  Score=42.20  Aligned_cols=29  Identities=14%  Similarity=0.149  Sum_probs=26.3

Q ss_pred             CcccchHHHHHHHHHcCC----eEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGH----QVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~----~v~~~~r~~~~   31 (249)
                      |.|.+|+.+++.|.+.|+    +|++.+|++..
T Consensus         9 G~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~   41 (247)
T 3gt0_A            9 GCGNMGMAMIGGMINKNIVSSNQIICSDLNTAN   41 (247)
T ss_dssp             CCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHH
T ss_pred             CccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHH
Confidence            579999999999999998    99999998765

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=92.73  E-value=0.23  Score=40.14  Aligned_cols=90  Identities=10%  Similarity=0.121  Sum_probs=58.3

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccC--C---HHHHHHhhhhCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK--D---YDFVKSSLSAKGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~--d---~~~l~~~~~~~~~d   74 (249)
                      +|+ |-+|...++.+...|. +|+++++++.+....         .+  -+... ..|..  +   .+.+.++... ++|
T Consensus       200 ~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a---------~~--lGa~~-vi~~~~~~~~~~~~i~~~~~g-g~D  265 (378)
T 3uko_A          200 FGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA---------KK--FGVNE-FVNPKDHDKPIQEVIVDLTDG-GVD  265 (378)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH---------HT--TTCCE-EECGGGCSSCHHHHHHHHTTS-CBS
T ss_pred             ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH---------HH--cCCcE-EEccccCchhHHHHHHHhcCC-CCC
Confidence            366 8899999999988898 899999887763211         01  12222 22433  1   3344444444 899


Q ss_pred             EEEecCCCChhhhHHHHHhCCC-CCeEEEeec
Q 025702           75 VVYDINGREADEVEPILDALPN-LEQFIYCSS  105 (249)
Q Consensus        75 ~Vi~~~~~~~~~~~~~~~a~~~-~~~~i~~Ss  105 (249)
                      +||++.+. .......++.++. ..+++.++.
T Consensus       266 ~vid~~g~-~~~~~~~~~~l~~g~G~iv~~G~  296 (378)
T 3uko_A          266 YSFECIGN-VSVMRAALECCHKGWGTSVIVGV  296 (378)
T ss_dssp             EEEECSCC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred             EEEECCCC-HHHHHHHHHHhhccCCEEEEEcc
Confidence            99999985 3345667777774 478887774

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=92.72  E-value=0.17  Score=40.69  Aligned_cols=84  Identities=15%  Similarity=0.148  Sum_probs=55.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|...|.+|++.+|.......          .  ..++.        ...++++++  .+|+|+.+...
T Consensus       183 GlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~----------~--~~g~~--------~~~l~ell~--~aDvV~l~~Pl  240 (365)
T 4hy3_A          183 GFGDLGKALRRVLSGFRARIRVFDPWLPRSML----------E--ENGVE--------PASLEDVLT--KSDFIFVVAAV  240 (365)
T ss_dssp             CCSHHHHHHHHHHTTSCCEEEEECSSSCHHHH----------H--HTTCE--------ECCHHHHHH--SCSEEEECSCS
T ss_pred             cCCcccHHHHHhhhhCCCEEEEECCCCCHHHH----------h--hcCee--------eCCHHHHHh--cCCEEEEcCcC
Confidence            57899999999999999999999987532100          0  12332        123556777  89999977554


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ...    .....+..++...-+|.+|...+
T Consensus       241 t~~T~~li~~~~l~~mk~gailIN~aRG~~  270 (365)
T 4hy3_A          241 TSENKRFLGAEAFSSMRRGAAFILLSRADV  270 (365)
T ss_dssp             SCC---CCCHHHHHTSCTTCEEEECSCGGG
T ss_pred             CHHHHhhcCHHHHhcCCCCcEEEECcCCch
Confidence            321    12445666775567888886665

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=92.70  E-value=0.13  Score=41.15  Aligned_cols=86  Identities=13%  Similarity=0.035  Sum_probs=54.3

Q ss_pred             CcccchHHHHHHHH-HcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLV-KEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+.+++.|. ..|++|++.+|++......         .  ..++.+.    .   .+.++++  .+|+|+.+..
T Consensus       170 G~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~---------~--~~g~~~~----~---~l~ell~--~aDvVil~vp  229 (348)
T 2w2k_A          170 GLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE---------K--ALGAERV----D---SLEELAR--RSDCVSVSVP  229 (348)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH---------H--HHTCEEC----S---SHHHHHH--HCSEEEECCC
T ss_pred             EECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH---------h--hcCcEEe----C---CHHHHhc--cCCEEEEeCC
Confidence            56999999999999 8899999999886542110         0  0123221    1   2445666  8899998766


Q ss_pred             CChh--h--hHHHHHhCCCCCeEEEeecccc
Q 025702           82 READ--E--VEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        82 ~~~~--~--~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      ....  .  ...++..++...-+|.+|+..+
T Consensus       230 ~~~~t~~li~~~~l~~mk~gailin~srg~~  260 (348)
T 2w2k_A          230 YMKLTHHLIDEAFFAAMKPGSRIVNTARGPV  260 (348)
T ss_dssp             CSGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             CChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence            5321  1  1345666764456777776544

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=92.67  E-value=0.29  Score=43.75  Aligned_cols=90  Identities=16%  Similarity=0.144  Sum_probs=58.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      .||+|-+|...++.....|.+|++++++. +. ..+..         +.. .+  .|..+.   +.+.+.....++|+||
T Consensus       352 ~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~-~~l~l---------ga~-~v--~~~~~~~~~~~i~~~t~g~GvDvVl  417 (795)
T 3slk_A          352 HSAAGGVGMAAIQLARHLGAEVYATASED-KW-QAVEL---------SRE-HL--ASSRTCDFEQQFLGATGGRGVDVVL  417 (795)
T ss_dssp             ESTTBHHHHHHHHHHHHTTCCEEEECCGG-GG-GGSCS---------CGG-GE--ECSSSSTHHHHHHHHSCSSCCSEEE
T ss_pred             ecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hh-hhhhc---------Chh-he--eecCChhHHHHHHHHcCCCCeEEEE
Confidence            37899999999999999999999988664 31 11110         111 11  244433   3334443445899999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      ++.+.  ......++.++...+||.++..
T Consensus       418 d~~gg--~~~~~~l~~l~~~Gr~v~iG~~  444 (795)
T 3slk_A          418 NSLAG--EFADASLRMLPRGGRFLELGKT  444 (795)
T ss_dssp             ECCCT--TTTHHHHTSCTTCEEEEECCST
T ss_pred             ECCCc--HHHHHHHHHhcCCCEEEEeccc
Confidence            98874  4456667777766788887643

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=92.66  E-value=0.16  Score=34.92  Aligned_cols=76  Identities=8%  Similarity=-0.052  Sum_probs=45.0

Q ss_pred             CCCc---ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~t---G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +|++   |.+|+.+++.|++.|++|+.++.....                ..++. ++.++      .++.+  .+|.++
T Consensus        28 VGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~----------------i~G~~-~y~sl------~~l~~--~vDlvv   82 (144)
T 2d59_A           28 VGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE----------------VLGRK-CYPSV------LDIPD--KIEVVD   82 (144)
T ss_dssp             ETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----------------ETTEE-CBSSG------GGCSS--CCSEEE
T ss_pred             EccCCCCCchHHHHHHHHHHCCCEEEEECCCCCe----------------ECCee-ccCCH------HHcCC--CCCEEE
Confidence            3676   789999999999999986655433211                01222 11122      23333  789888


Q ss_pred             ecCCCChhhhHHHHHhCC--CCCeEEEe
Q 025702           78 DINGREADEVEPILDALP--NLEQFIYC  103 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~--~~~~~i~~  103 (249)
                      -+...  .....+++.|.  +++.+++.
T Consensus        83 i~vp~--~~~~~vv~~~~~~gi~~i~~~  108 (144)
T 2d59_A           83 LFVKP--KLTMEYVEQAIKKGAKVVWFQ  108 (144)
T ss_dssp             ECSCH--HHHHHHHHHHHHHTCSEEEEC
T ss_pred             EEeCH--HHHHHHHHHHHHcCCCEEEEC
Confidence            76543  56666666544  66655533

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	249
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-22
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-21
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-20
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-18
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-15
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-14
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	3e-13
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	4e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-12
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	7e-12
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-11
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	8e-10
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-09
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-09
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	4e-09
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	6e-09
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-09
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-08
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-08
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-06
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.001
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.002
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.002

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 91.4 bits (226), Expect = 3e-22
 Identities = 47/267 (17%), Positives = 84/267 (31%), Gaps = 33/267 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L+  L+++G++V    R  +    +      Q+    + K     GD  D 
Sbjct: 8   GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEV---EP-------------ILDA-----LPNLEQF 100
             +   L     D VY++       V    P             +L+A     L    +F
Sbjct: 68  SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF 127

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIY 155
              S++ +Y     +P  ET    P+S +   KL    +     ES G+   +       
Sbjct: 128 YQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHE 187

Query: 156 GPL-----NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            P          +     +  +        G+   +   GH KD  +    +L  E+   
Sbjct: 188 SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQP-- 245

Query: 211 QVFNISGEKYVTFDGLARACAKVTGYC 237
           + F I+     +        A   G  
Sbjct: 246 EDFVIATGVQYSVRQFVEMAAAQLGIK 272

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 88.0 bits (217), Expect = 4e-21
 Identities = 46/260 (17%), Positives = 85/260 (32%), Gaps = 24/260 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKD 60
           GG  FIG    R L+   +            +    G  ++    +   ++  + GD +D
Sbjct: 7   GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRD 66

Query: 61  YDFVKSS---------LSAKGFDVVYDINGREADEVEP-----ILDAL--PNLEQFIYCS 104
              +             +A+              E        +L       + + ++ S
Sbjct: 67  AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVS 126

Query: 105 SAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPL- 158
           +  VY   D     E+  ++P S +   K  ++ V      + G++    R    YGP  
Sbjct: 127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQ 186

Query: 159 NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
           +   +   F   L  G  +P+ G G  V +  H  D  R    VL   +A  ++++I G 
Sbjct: 187 HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAG-EIYHIGGG 245

Query: 219 KYVTFDGLARACAKVTGYCI 238
             +T   L        G   
Sbjct: 246 LELTNRELTGILLDSLGADW 265

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 1e-20
 Identities = 52/279 (18%), Positives = 95/279 (34%), Gaps = 47/279 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  F+G  L+  L+ +GH+VT+         + +              I H   +  ++
Sbjct: 8   GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINH 56

Query: 62  DFVKSSLSAKGFDVVY----DINGREADEVEPILDALPNLE--------------QFIYC 103
           D V+        D +Y      +        PI     N                + +  
Sbjct: 57  DVVEPLY--IEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLLA 113

Query: 104 SSAGVYLKSDLLPHCE-----TDTVDPKSR-HKGKLNTESVL----ESKGVNWTSLRPVY 153
           S++ VY   ++ P  E      + + P++   +GK   E++     + +GV     R   
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173

Query: 154 IYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR 210
            +GP   +N   V   F  +   G P+ + GSG Q     +V DL    V ++ +  +  
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-- 231

Query: 211 QVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
              N+   +  T    A+    + G            DD
Sbjct: 232 SPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD 270

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 79.4 bits (195), Expect = 7e-18
 Identities = 48/291 (16%), Positives = 84/291 (28%), Gaps = 52/291 (17%)

Query: 2   GGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           GG  FIG  + R ++K      V +     A   + L   S+     F         D  
Sbjct: 7   GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF------EHADIC 60

Query: 60  DYDFVKSSLSAKGFDVVY---DINGREADEVEPILDALPNLE------------------ 98
           D   +         D V      +  +     P      N+                   
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 99  ------QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----------KGKLNTESVL-- 139
                 +F + S+  VY         E     P                 K +++ ++  
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 140 --ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
              + G+          YGP ++   +          G+P+PI G G Q+    +V+D A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMP 247
           RA   V+   KA  + +NI G        +      +    +  +  +R  
Sbjct: 241 RALHMVVTEGKAG-ETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQ 290

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 70.6 bits (171), Expect = 6e-15
 Identities = 30/238 (12%), Positives = 74/238 (31%), Gaps = 16/238 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T +IG  +++  +  GH   L  R     +     +  + F   +S    + G   D+
Sbjct: 10  GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDH 67

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALP---NLEQFIYCSSAGVYLKSDLLPHC 118
             +  ++  K  DVV    G    E +  +          +  + S  G  + +      
Sbjct: 68  ASLVEAV--KNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 125

Query: 119 ETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 178
                + K++ +  +       ++G+ +T +      G   +                + 
Sbjct: 126 AKSVFEVKAKVRRAIE------AEGIPYTYVSSNCFAGY--FLRSLAQAGLTAPPRDKVV 177

Query: 179 IPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKVTG 235
           I G G         +D+    ++ + + +   +  +       ++ + L     K   
Sbjct: 178 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID 235

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.2 bits (168), Expect = 3e-14
 Identities = 41/269 (15%), Positives = 81/269 (30%), Gaps = 34/269 (12%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTR-GKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G +L+  L+++G++V    R   +    ++        A     +    GD  D
Sbjct: 8   GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD 67

Query: 61  YDFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDA--LPNLEQ 99
              +   ++      +                    D++G     +   +    L N  +
Sbjct: 68  STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 127

Query: 100 FIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYI 154
           F   S++ +Y K   +P  ET    P+S +   KL    ++    E+  +   +      
Sbjct: 128 FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNH 187

Query: 155 YGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 209
             P          +                 G+       GH KD   A   +L N++  
Sbjct: 188 ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEP- 246

Query: 210 RQVFNISGEKYVTFDGLARACAKVTGYCI 238
            + F I+  +  +            G  I
Sbjct: 247 -EDFVIATGEVHSVREFVEKSFLHIGKTI 274

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 65.9 bits (159), Expect = 3e-13
 Identities = 22/240 (9%), Positives = 62/240 (25%), Gaps = 15/240 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GGT +IG  +    +  GH   +  R +         +              ++    D+
Sbjct: 10  GGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---IDKVQMLLYFKQLGAKLIEASLDDH 66

Query: 62  DFVKSSLSAKGFDVV-----YDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
             +  +L      +         +                  +    S  G+        
Sbjct: 67  QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD-----PD 121

Query: 117 HCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 176
             E            K      +E+  + +T +      G      + +   H +     
Sbjct: 122 IMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDK 180

Query: 177 IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ-VFNISGEKYVTFDGLARACAKVTG 235
           + I G G          D+    ++ + + +   + ++       ++   + +   +++ 
Sbjct: 181 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 240

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 65.8 bits (159), Expect = 4e-13
 Identities = 44/261 (16%), Positives = 79/261 (30%), Gaps = 27/261 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FIG  L   L+K   +V           + L         +  S    ++GD ++ 
Sbjct: 23  GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL 82

Query: 62  DFV-KSSLSAKGFDVVYDINGREADEVEPILDALPNLE---------------QFIYCSS 105
           D    +            +        +PI     N++                F Y +S
Sbjct: 83  DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 142

Query: 106 AGVYLKSDLLPHCETDTVDPKS-----RHKGKLNTESVLESKGVNWTSLRPVYIYGP--- 157
           +  Y     LP  E     P S     ++  +L  +      G +   LR   ++G    
Sbjct: 143 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD 202

Query: 158 --LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQVFN 214
               Y  V   +   +  G  + I G G       ++++  +A +        A  QV+N
Sbjct: 203 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYN 262

Query: 215 ISGEKYVTFDGLARACAKVTG 235
           I+     + + L  A      
Sbjct: 263 IAVGGRTSLNQLFFALRDGLA 283

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (152), Expect = 1e-12
 Identities = 27/217 (12%), Positives = 63/217 (29%), Gaps = 22/217 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G+      V+ G++VT+  R  + +  + P  +     +        K      
Sbjct: 10  GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQD 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +   L     D+       E             +++ + C+SA +      +P     
Sbjct: 70  AVI--VLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR--- 124

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
               ++     +    VL   G+ + ++ P                  +   G    +  
Sbjct: 125 ---LQAVTDDHIRMHKVLRESGLKYVAVMPP-------------HIGDQPLTGA-YTVTL 167

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE 218
            G   +++    DL    ++ L  ++        S +
Sbjct: 168 DGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 62.0 bits (149), Expect = 7e-12
 Identities = 32/239 (13%), Positives = 64/239 (26%), Gaps = 18/239 (7%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRG-KAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
           G T   G  L R+    GH V       K  IA++L    +    +         G   +
Sbjct: 10  GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQ---------GPLLN 60

Query: 61  YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCET 120
                  +               +   + I       +      +   Y+ S +  H   
Sbjct: 61  NV---PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117

Query: 121 DTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR-PIPI 179
                      K   E+ +   G+  T +            P   +    +  G      
Sbjct: 118 GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHA 177

Query: 180 PGSG-IQVTQLGHVKDLARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTG 235
           P    I +  L    D+  A +Q+  +  +K +     ++ E   +   +  A ++   
Sbjct: 178 PFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETL-SPVQVCAAFSRALN 235

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 61.4 bits (148), Expect = 1e-11
 Identities = 51/295 (17%), Positives = 89/295 (30%), Gaps = 72/295 (24%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + R L + G    +                              + +  D 
Sbjct: 9   GHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDS 43

Query: 62  DFVKSSLSAKGFDVVY----------DINGREADEVEPILDALPNL---------EQFIY 102
             V    +++  D VY            N   AD +   +    N+          + ++
Sbjct: 44  RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRH------KGKLNTESVLES----KGVNWTSLRPV 152
             S+ +Y K    P  E++ +              K+    + ES     G ++ S+ P 
Sbjct: 104 LGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPT 163

Query: 153 YIYGPL-NYNPVEEWFFHRLK---------AGRPIPIPGSGIQVTQLGHVKDLARAFVQV 202
            +YGP  N++P        L              + + GSG  + +  HV D+A A + V
Sbjct: 164 NLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 223

Query: 203 LGNEKASRQ--------VFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
           +                  N+      T   LA+  AKV GY      +   PD 
Sbjct: 224 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDG 278

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 55.7 bits (133), Expect = 8e-10
 Identities = 48/296 (16%), Positives = 88/296 (29%), Gaps = 55/296 (18%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG+ +IG      L++ GH V +       K  +   +     +           ++GD 
Sbjct: 7   GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-------FVEGDI 59

Query: 59  KDYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPN---------------LEQF 100
           ++   +   L     D V     +        +P+     N               ++ F
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 101 IYCSSAGVYLKSDLLPHCETDTVDP-------KSRHKGKLNTESVLESKGVNWTSLRPVY 153
           I+ SSA VY     +P+ E+                  ++ T+        +   LR   
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 154 IYGPLNYNPVEEW----------FFHRLKAGR--PIPIPGS------GIQVTQLGHVKDL 195
             G      + E           +  ++  GR   + I G+      G  V    HV DL
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239

Query: 196 ARAFVQVLGNEKASR--QVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
           A   V  +          ++N+      +   +  A +K  G  +      R   D
Sbjct: 240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGD 295

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 55.4 bits (132), Expect = 1e-09
 Identities = 39/271 (14%), Positives = 82/271 (30%), Gaps = 36/271 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G +L++LL+++G++V      ++                    I +  GD  D 
Sbjct: 7   GITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-----RWRLRELGIEGDIQYEDGDMADA 61

Query: 62  DFVKSSLSAKGFDVV-------------------YDINGREADEVEPILDALPNLEQFIY 102
             V+ ++       V                     ++G     +   +       +F  
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 103 CSSAGVYLKSDLLPHCETDTVDPKSRHK-----GKLNTESVLESKGVNWTSLRPVYIYGP 157
            S++ ++         E     P+S +      G   T +  ES G++ +S        P
Sbjct: 122 ASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESP 181

Query: 158 LNYNPVEEW----FFHRLKAGRPIPIP-GSGIQVTQLGHVKDLARAFVQVLGNEKASRQV 212
           L               R+K G+   +  G+       G   D   A   +L  +K     
Sbjct: 182 LRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADD 239

Query: 213 FNISGEKYVTFDGLARACAKVTGYCIAGSVE 243
           + ++     T   + +   +  G      ++
Sbjct: 240 YVVATGVTTTVRDMCQIAFEHVGLDYRDFLK 270

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.3 bits (126), Expect = 4e-09
 Identities = 29/251 (11%), Positives = 60/251 (23%), Gaps = 27/251 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G +   G  + + L +   +       ++   ++  G     F    +    +    +  
Sbjct: 10  GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI 69

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDAL--------------PNLEQFIYCSSAG 107
           D +    SA           +         D                   +         
Sbjct: 70  DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVV 129

Query: 108 VYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWF 167
           V       P    + +   +    K   E  L   G  +T +R   +         E   
Sbjct: 130 VGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK------EGGV 183

Query: 168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKY---VTFD 224
              L       +      V       D+A   +Q L  E+A  + F++  +         
Sbjct: 184 RELLVGKDDELLQTDTKTV----PRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTK 239

Query: 225 GLARACAKVTG 235
                 ++VT 
Sbjct: 240 DFKALFSQVTS 250

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.8 bits (128), Expect = 4e-09
 Identities = 41/260 (15%), Positives = 78/260 (30%), Gaps = 28/260 (10%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   FI   ++R L  EGH V      K     +     +    +       LK   +  
Sbjct: 22  GAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-VTEGV 80

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPI-------LDALPNLEQFIYCSSAG------- 107
           D V +  +  G       N         +          +  +++F Y SSA        
Sbjct: 81  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 140

Query: 108 VYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES----KGVNWTSLRPVYIYGP----- 157
           +   +  L   +    +P+      KL TE + +      G+     R   IYGP     
Sbjct: 141 LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 200

Query: 158 -LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNIS 216
                    +      +     + G G+Q      + +     +++   +   R+  NI 
Sbjct: 201 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT--KSDFREPVNIG 258

Query: 217 GEKYVTFDGLARACAKVTGY 236
            ++ V+ + +A         
Sbjct: 259 SDEMVSMNEMAEMVLSFEEK 278

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.1 bits (126), Expect = 6e-09
 Identities = 35/246 (14%), Positives = 63/246 (25%), Gaps = 33/246 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRKD 60
           G T   G +L+  L+ +G++V    R  +    Q       +    +  ++ L   D  D
Sbjct: 8   GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD 67

Query: 61  YDFVKSSLSAKGFDVVYDI----------------------NGREADEVEPILDALPNLE 98
              ++  +     D VY++                            E            
Sbjct: 68  ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT 127

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-----KGKLNTESVLESKGVNWTSLRPVY 153
              Y + +     S   P  ET    P+S +          T +  E+ G+   +     
Sbjct: 128 VKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFN 187

Query: 154 IYGP-----LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
              P          +           +     G+       G   D   A   +L  EK 
Sbjct: 188 HESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP 247

Query: 209 SRQVFN 214
              V  
Sbjct: 248 DDYVVA 253

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 53.1 bits (126), Expect = 6e-09
 Identities = 46/281 (16%), Positives = 74/281 (26%), Gaps = 37/281 (13%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           GG  FIG      +      V +    K   A    G      A    ++  + GD  D 
Sbjct: 9   GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYA----GNKANLEAILGDRVELVVGDIADA 64

Query: 62  DFVKSSLSAKGFDVVY-DINGREADEVEPILDALPNLEQFIYC--------------SSA 106
           + V    +     V Y   +  +    +P      N                     S+ 
Sbjct: 65  ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124

Query: 107 GVY----LKSDLLPHC--------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSL 149
            VY    L+ DL  H              +P S +   K  ++ ++     S GV  T  
Sbjct: 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATIS 184

Query: 150 RPVYIYGPL-NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA 208
                YGP  +           + AG    + G G  V    H  D +     +L   + 
Sbjct: 185 NCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM 244

Query: 209 SRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
                  +  +    + L     K+     A          
Sbjct: 245 GETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGH 285

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 52.4 bits (124), Expect = 1e-08
 Identities = 46/291 (15%), Positives = 87/291 (29%), Gaps = 65/291 (22%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT----LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD 57
           GG  F+G  L+   + +G  +     L  +G       L    + EF         + GD
Sbjct: 7   GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEF---------VHGD 57

Query: 58  RKDYDFVKSSLSAKGFDVVYDINGREADEV---EPILDALPNLE---------------- 98
            ++ + V   ++    D  + + G+ A       P +D   N+                 
Sbjct: 58  IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117

Query: 99  QFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVL------------------- 139
             IY S+  VY   +   + ET+T           +  + L                   
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 140 --ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------RLKAGRPIPIPGSGIQVTQ 188
                G+N    R   +YG   +   ++ +           +    +P  I G+G QV  
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237

Query: 189 LGHVKDLARAFVQVLGNEKASR---QVFNISGEKYVTFDGLARACAKVTGY 236
           + H +D+   +   L N    R        +    ++   L +        
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI 288

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.2 bits (121), Expect = 3e-08
 Identities = 48/304 (15%), Positives = 86/304 (28%), Gaps = 63/304 (20%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDR 58
           GG  +IG      L++ G+   +    +        +L   +          I   + D 
Sbjct: 8   GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-------HHIPFYEVDL 60

Query: 59  KDYDFVKSSLSAKGFDVV------------------YDINGREADEVEPILDALPNLEQF 100
            D   ++        D V                  Y  N      V   L    N+ +F
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 101 IYCSSAGVYLKS----DLLPHCETDTVDPKSRH-KGKLNTESVLES------KGVNWTSL 149
           ++ SSA VY  +    +++P  E   + P + +   K   E++L        K   +  L
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180

Query: 150 RPVYIYGPLNYNPVEEWFFHR------------LKAGRPIPIPGSGIQVTQLGHVKDLAR 197
           R     G      + E                 +     + I G          ++D   
Sbjct: 181 RYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240

Query: 198 AFVQVLGNEKASR------------QVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHR 245
                 G+  A +            + +N+   K  T   +  A  K +G  +   V  R
Sbjct: 241 VVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR 300

Query: 246 MPDD 249
              D
Sbjct: 301 RAGD 304

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (107), Expect = 1e-06
 Identities = 31/230 (13%), Positives = 64/230 (27%), Gaps = 20/230 (8%)

Query: 2   GGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK 59
           G +   G  L + ++++G   +VTL  R K    ++     +QE  +F     +    + 
Sbjct: 21  GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG 80

Query: 60  DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE 119
                                G E          L + E           L S       
Sbjct: 81  HDVGFCC------LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS 134

Query: 120 TDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 179
           ++ +  + + +       V E K   ++  RP  +      +   EW   +         
Sbjct: 135 SNFLYLQVKGE---VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF-----FGS 186

Query: 180 PGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARA 229
                       V  + RA +  +      +Q+  +  +       L +A
Sbjct: 187 LPDSWASGHSVPVVTVVRAMLNNV-VRPRDKQMELLENKAIHD---LGKA 232

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 45.1 bits (105), Expect = 2e-06
 Identities = 26/212 (12%), Positives = 52/212 (24%), Gaps = 20/212 (9%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G T   G  L   ++ E     +    +  +A+    ++                  +  
Sbjct: 9   GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGP------------LAELL 56

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
             +  S+      +   I    ++E    +D    L         G      +       
Sbjct: 57  PQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 116

Query: 122 TVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 181
                         +++ E      T  RP  ++GP     + E     +       I  
Sbjct: 117 KSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPI-----ARILP 171

Query: 182 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVF 213
                       DLARA  ++   E    +  
Sbjct: 172 GKYHGI---EACDLARALWRLALEEGKGVRFV 200

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (105), Expect = 3e-06
 Identities = 48/295 (16%), Positives = 84/295 (28%), Gaps = 47/295 (15%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHL-KGDRK 59
           GG  +IG      L++ G+    +     A        ES +   E + + +   + D  
Sbjct: 9   GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68

Query: 60  DYDFVKSSLSAKGFDVVYD---INGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLP 116
           D   ++       F  V     +        +P+     NL   I             L 
Sbjct: 69  DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLV 128

Query: 117 HCETDTVDPKSRH-----------------KGKLNTESVLES-----KGVNWTSLRPVYI 154
              + TV    ++                 K K   E ++       K  N   LR    
Sbjct: 129 FSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNP 188

Query: 155 YGPLNYNPVEEW----------FFHRLKAGRPIPIP--------GSGIQVTQLGHVKDLA 196
            G      + E           +  ++  GR   +           G  V    HV DLA
Sbjct: 189 TGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLA 248

Query: 197 RAFV--QVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
           +  +       E+   +++N+      +   + +A  K +G  I   V  R   D
Sbjct: 249 KGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGD 303

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 27/293 (9%), Positives = 62/293 (21%), Gaps = 49/293 (16%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G   F+   +   L++ G++V    R  + +A        +    F + +     D    
Sbjct: 18  GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAV---VEDMLKQ 74

Query: 62  DFVKSSLSAKGFDV----VYDINGREADEVEPILDALPNLEQFIYC------------SS 105
                 +           V   + +  + V P +    N  +                + 
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134

Query: 106 AGVYLKSDLLPHCETDTVDPKSRH-------------------KGKLNTESVLESKGVNW 146
           + +  K ++      +                             K   E          
Sbjct: 135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN 194

Query: 147 TSLRPVY----------IYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA 196
                +           I+ P   +     +   L  G   P     +         D+ 
Sbjct: 195 KPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA-LMPPQYYVSAVDIG 253

Query: 197 RAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
              +  L   +  R+    +   +     LA                 +  D 
Sbjct: 254 LLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDL 306

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 26/236 (11%), Positives = 65/236 (27%), Gaps = 16/236 (6%)

Query: 2   GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
           G    +G  + + L  +  +V         I               +      K +    
Sbjct: 8   GANGQLGREIQKQLKGKNVEVIPTDVQDLDIT---------NVLAVNKFFNEKKPNVVIN 58

Query: 62  DFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETD 121
               +++                        A     + +  S+  V+      P  E D
Sbjct: 59  CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFD 118

Query: 122 T-VDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 180
                 +  K KL  E+ +++    +  +R  ++YG  N          +      +   
Sbjct: 119 EVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHD 178

Query: 181 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTGY 236
             G   + +   +      V +   ++ +   F+ + +   ++   A    ++TG 
Sbjct: 179 QVGTPTSTVDLAR------VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGI 228

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 36.8 bits (83), Expect = 0.002
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
          G T F G +LS  L   G  V  ++     +          E A  +  +    GD +D 
Sbjct: 15 GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQ 68

Query: 62 DFV 64
          + +
Sbjct: 69 NKL 71

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 47/332 (14%), Positives = 86/332 (25%), Gaps = 84/332 (25%)

Query: 2   GGTRFIGVFLSRLLVKE-GHQVTLF------------TRGKAPIAQQLPGESDQEFAEFS 48
           GG  +IG    R L+++  H V +                +  +A++L      +     
Sbjct: 9   GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWAD 68

Query: 49  SKILHLKGDRKDYDFVKS----SLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCS 104
                  GD ++ DF+               +           +P+     N+   +   
Sbjct: 69  RYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLL 128

Query: 105 SAGVYLKSDLLPHCETDTVDP---------------------------KSRHKGKLNTES 137
            A +  K D +    +  +                             +S+   +     
Sbjct: 129 QAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRD 188

Query: 138 VLESKGVNWTSLRPVYIYGPLNYNPVEEWF--------------------------FHRL 171
             E+ G+    LR     G      + E +                              
Sbjct: 189 CAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDA 248

Query: 172 KAGRPIPIPGS------GIQVTQLGHVKDLARAFVQVLGNEK--------ASRQVFNISG 217
              + +PI G+      G  V    HV DLA A +  L   +            VFN+  
Sbjct: 249 STDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT 308

Query: 218 EKYVTFDGLARACAKVTGYCIAGSVEHRMPDD 249
            +  +   +     K TG+ I      R   D
Sbjct: 309 SRGYSVREVIEVARKTTGHPIPVRECGRREGD 340

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 36.1 bits (81), Expect = 0.002
 Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 23/79 (29%)

Query: 2  GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
          G T  +G  L R L   G+ + L    K                          GD  + 
Sbjct: 7  GKTGQVGWELQRSLAPVGNLIALDVHSK-----------------------EFCGDFSNP 43

Query: 62 DFVKSSLSAKGFDVVYDIN 80
            V  ++     DV+ +  
Sbjct: 44 KGVAETVRKLRPDVIVNAA 62

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	249
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.98
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.98
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.98
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.97
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.97
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.96
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.96
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.94
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.93
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.9
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.9
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.88
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.67
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.66
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.65
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.65
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.65
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.65
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.64
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.64
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.64
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.63
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.63
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.63
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.62
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.62
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.61
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.61
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.6
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.59
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.59
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.58
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.58
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.58
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.58
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.58
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.57
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.57
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.56
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.56
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.56
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.56
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.55
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.55
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.55
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.55
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.54
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.53
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.52
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.5
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.49
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.48
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.47
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.45
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.44
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.41
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.38
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.38
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.37
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.37
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.33
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.32
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.31
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.29
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.25
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.24
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.22
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.19
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.18
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.17
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.16
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.11
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.09
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.02
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.93
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.89
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.6
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.98
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.78
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.65
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.4
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.39
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.31
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.12
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.92
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.84
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.83
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.8
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.7
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.67
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.62
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.6
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.6
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.51
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.36
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.32
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.19
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.13
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.05
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.02
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.97
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.92
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.85
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.79
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	95.57
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.49
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.47
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.32
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.3
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.28
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.2
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.14
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.1
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.04
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.04
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.02
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	94.93
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.93
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.9
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.87
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.56
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.55
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	94.52
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	94.49
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	94.34
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.33
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.3
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	94.3
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	94.28
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	94.26
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	94.22
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.04
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	93.82
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.76
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.63
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	93.55
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	93.37
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	93.33
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.31
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	93.31
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.18
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	93.0
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	92.87
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.87
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.62
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	92.62
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	92.54
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	92.53
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	92.5
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	92.32
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.23
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	92.14
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.96
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	91.88
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	91.66
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.6
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	91.49
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	91.27
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	91.21
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.19
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.12
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	90.77
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	90.63
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	90.58
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	90.53
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	90.34
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	90.09
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	90.08
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	89.97
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	89.84
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	88.91
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	88.81
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	88.58
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	88.55
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.41
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	88.27
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	88.15
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	88.09
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.03
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	87.93
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	87.89
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	87.75
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	87.71
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.21
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	87.1
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	87.0
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	86.93
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	86.92
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	86.54
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	86.52
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.43
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	86.33
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	86.07
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	86.04
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	85.82
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.81
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	85.18
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	83.96
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	83.43
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.65
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	82.55
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	80.64
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	80.57
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	80.51
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	80.29

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.6e-39  Score=259.10  Aligned_cols=234  Identities=19%  Similarity=0.164  Sum_probs=183.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|++.|++|++++|......................+++++.+|++|.+++.++++..++|+|||+|
T Consensus         7 TGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~a   86 (357)
T d1db3a_           7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLG   86 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEee
Confidence            79999999999999999999999999965432110000000111122468999999999999999999988899999998


Q ss_pred             CC----------------ChhhhHHHHHhCC-----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHH
Q 025702           81 GR----------------EADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESV  138 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~  138 (249)
                      +.                |+.++.+++++|+     +..||||+||..|||.....+++|+.+..|.+.| .+|..+|++
T Consensus        87 a~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~  166 (357)
T d1db3a_          87 AMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWI  166 (357)
T ss_dssp             CCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             cccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence            75                2346888999875     3457999999999998888899999999999988 999999988


Q ss_pred             Hh----hcCCcEEEeecceeeCCCCCcc----hHHHHHHHHHcCCC-eeecCCCcceEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          139 LE----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRP-IPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       139 ~~----~~~~~~~~~r~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      ++    +.+++++++||+++|||+....    .+...+.....+.. ...++++.+.++++|++|+++++..+++++  .
T Consensus       167 ~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~--~  244 (357)
T d1db3a_         167 TVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE--Q  244 (357)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS--S
T ss_pred             HHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC--C
Confidence            74    4689999999999999964332    23334444444443 445688889999999999999999998875  4


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhCC
Q 025702          210 RQVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       210 ~~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                      ++.||+++++.+|+.|+++++.+.+|.
T Consensus       245 ~~~yni~sg~~~s~~~~~~~~~~~~g~  271 (357)
T d1db3a_         245 PEDFVIATGVQYSVRQFVEMAAAQLGI  271 (357)
T ss_dssp             CCCEEECCCCCEEHHHHHHHHHHTTTE
T ss_pred             CCeEEECCCCceehHHHHHHHHHHhCC
Confidence            689999999999999999999999984

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=2.8e-37  Score=246.61  Aligned_cols=234  Identities=19%  Similarity=0.285  Sum_probs=195.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeE------EEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQV------TLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v------~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d   74 (249)
                      ||||||||++|++.|+++|++|      +.+++.........     ........+++++.+|..+...+.....  .+|
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d   78 (322)
T d1r6da_           6 TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN-----LAPVDADPRLRFVHGDIRDAGLLARELR--GVD   78 (322)
T ss_dssp             ETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG-----GGGGTTCTTEEEEECCTTCHHHHHHHTT--TCC
T ss_pred             ECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhH-----hhhhhcCCCeEEEEeccccchhhhcccc--ccc
Confidence            7999999999999999999754      44443322211000     0001114689999999999998888777  999


Q ss_pred             EEEecCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHH
Q 025702           75 VVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (249)
Q Consensus        75 ~Vi~~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (249)
                      .|+|+|+..                ..++.++++++.  ++++|||+||..+||.....+++|+.+..|.+.| .+|..+
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~  158 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGS  158 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence            999998763                446888999987  7899999999999999888899999999999999 999999


Q ss_pred             HHHH----hhcCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC
Q 025702          136 ESVL----ESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (249)
Q Consensus       136 e~~~----~~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (249)
                      |.++    ++.+++++++||+++|||++. ..+++.++.++.+++++.+++++++.++|+|++|+|+++..+++++. .+
T Consensus       159 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~-~~  237 (322)
T d1r6da_         159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-AG  237 (322)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TT
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC-CC
Confidence            9887    456899999999999999854 46788899999999999999999999999999999999999999876 47


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCccccc
Q 025702          211 QVFNISGEKYVTFDGLARACAKVTGYCIAGSV  242 (249)
Q Consensus       211 ~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~  242 (249)
                      ++||+++++.+++.|+++.+.+.+|.+.+.+.
T Consensus       238 ~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~  269 (322)
T d1r6da_         238 EIYHIGGGLELTNRELTGILLDSLGADWSSVR  269 (322)
T ss_dssp             CEEEECCCCEEEHHHHHHHHHHHHTCCGGGEE
T ss_pred             CeeEEeecccchhHHHHHHHHHHhCCCcccee
Confidence            89999999999999999999999997655443

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-37  Score=244.11  Aligned_cols=223  Identities=21%  Similarity=0.294  Sum_probs=177.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||+|++|+++|+++|++|++++|........+.           .......+|+.+.+.++.++.  ++|+|||+|
T Consensus         7 tG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~--~~d~VihlA   73 (312)
T d2b69a1           7 TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-----------HWIGHENFELINHDVVEPLYI--EVDQIYHLA   73 (312)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-----------GGTTCTTEEEEECCTTSCCCC--CCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH-----------HhcCCCceEEEehHHHHHHHc--CCCEEEECc
Confidence            7999999999999999999999999975444322221           111112234444444445555  899999999


Q ss_pred             CCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCC-----CCCCCCCcc-cchHHHHH
Q 025702           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCET-----DTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~-----~~~~~~~~~-~~k~~~e~  137 (249)
                      +..                +.++.+++++++ ...|+||+||..|||.....+..|+     .+..|.+.| .+|..+|.
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~  153 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET  153 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence            852                335788999988 3348999999999997766666554     345677778 99999999


Q ss_pred             HHh----hcCCcEEEeecceeeCCCCC---cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCC
Q 025702          138 VLE----SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASR  210 (249)
Q Consensus       138 ~~~----~~~~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  210 (249)
                      +++    ..+++++++||+++|||+..   ..+++.++.++..++++.+++++.+.++++|++|++++++.+++...  +
T Consensus       154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~--~  231 (312)
T d2b69a1         154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--S  231 (312)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC--C
T ss_pred             HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc--C
Confidence            873    56899999999999999743   35788899999999999999999999999999999999999987654  5


Q ss_pred             ceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          211 QVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       211 ~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      +.||+++++.+++.++++.+++.+|.+.
T Consensus       232 ~~~n~~~~~~~~~~~~~~~i~~~~~~~~  259 (312)
T d2b69a1         232 SPVNLGNPEEHTILEFAQLIKNLVGSGS  259 (312)
T ss_dssp             SCEEESCCCEEEHHHHHHHHHHHHTCCC
T ss_pred             CceEecCCcccchhhHHHHHHHHhCCCC
Confidence            7899999999999999999999999543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.4e-35  Score=237.80  Aligned_cols=228  Identities=20%  Similarity=0.228  Sum_probs=183.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccc--cCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIA--QQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||||++|+++|++.|++|++..++.....  ..+..      ....++++++.+|++|.+.+..+++..++|+|||
T Consensus         6 tG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           6 TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSD------ISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             ESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTT------TTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHh------hhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            799999999999999999998655544322211  11110      0013689999999999999999998778999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC-----------CCCeEEEeeccccccCCCCCC----------CCCCC
Q 025702           79 INGRE----------------ADEVEPILDALP-----------NLEQFIYCSSAGVYLKSDLLP----------HCETD  121 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~-----------~~~~~i~~Ss~~v~~~~~~~~----------~~e~~  121 (249)
                      +|+..                ..++.+++++|+           ++++||++||..+||.....+          ..|..
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            99863                234677888764           245899999999998654322          23455


Q ss_pred             CCCCCCcc-cchHHHHHHHh----hcCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      +..|.+.| .+|..+|.++.    +.+++++++||+++|||++. ..+++.++.++.+++++.+++++.+.++|+|++|+
T Consensus       160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence            66788888 99999999874    46899999999999999754 45788899999999999988999999999999999


Q ss_pred             HHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      |+++..+++++.. +++|||++++.+++.++++.+.+.++
T Consensus       240 a~ai~~~~~~~~~-~~~~Ni~s~~~~s~~~~~~~i~~~~~  278 (361)
T d1kewa_         240 ARALHMVVTEGKA-GETYNIGGHNEKKNLDVVFTICDLLD  278 (361)
T ss_dssp             HHHHHHHHHHCCT-TCEEEECCCCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCC-CCeEEECCCCCcchHHHHhHhhhhcc
Confidence            9999999998764 77999999999999999999998774

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.9e-35  Score=236.67  Aligned_cols=235  Identities=20%  Similarity=0.183  Sum_probs=194.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++|+++|++.||+|++++|........+..............++++.+|+.|...+.....  .++.|+|++
T Consensus        22 TG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~~~v~~~~   99 (341)
T d1sb8a_          22 TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQA   99 (341)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--ccccccccc
Confidence            799999999999999999999999998554321100000000000113578999999999998888877  999999998


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-  140 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-  140 (249)
                      +..                +.++.+++++|+  ++++|||+||..+||.....+.+|+.+..|.+.| .+|..+|++++ 
T Consensus       100 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  179 (341)
T d1sb8a_         100 ALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV  179 (341)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHH
Confidence            752                456889999988  7889999999999999888899999999999999 99999998873 


Q ss_pred             ---hcCCcEEEeecceeeCCCCC-----cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCC-CCCc
Q 025702          141 ---SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEK-ASRQ  211 (249)
Q Consensus       141 ---~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~  211 (249)
                         ..+++++++||+++||++..     ..+++.++..+.+++++.+++++.+.++|+|++|++.++..++..+. ..++
T Consensus       180 ~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~  259 (341)
T d1sb8a_         180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQ  259 (341)
T ss_dssp             HHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSE
T ss_pred             HHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccce
Confidence               45799999999999998642     34677888899999999999999999999999999999999997753 3567


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCC
Q 025702          212 VFNISGEKYVTFDGLARACAKVTGYC  237 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~g~~  237 (249)
                      .|++++++.+|+.|+++.+.+.++.+
T Consensus       260 ~~~~~~~~~~si~~i~~~i~~~~~~~  285 (341)
T d1sb8a_         260 VYNIAVGGRTSLNQLFFALRDGLAEN  285 (341)
T ss_dssp             EEEESCSCCEEHHHHHHHHHHHHHHT
T ss_pred             eeeecccccchHHHHHHHHHHHhccc
Confidence            99999999999999999999999844

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-33  Score=224.43  Aligned_cols=234  Identities=23%  Similarity=0.294  Sum_probs=181.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|++.|+++|++|++++|........++    ........+++++++|++|.+.+.++++..++|+|||+|
T Consensus         6 tG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA   81 (338)
T d1udca_           6 TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLP----VIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA   81 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHH----HHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHH----HHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence            7999999999999999999999999875444211110    000011358999999999999999999988999999999


Q ss_pred             CC----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCC-CCCCCCcc-cchHHHHHHHh
Q 025702           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESVLE  140 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~-~~~~~~~~-~~k~~~e~~~~  140 (249)
                      +.                |+.++.+++++|+  ++++||++||..+|+.....+..|.. ...|.+.| .+|..+|.++.
T Consensus        82 a~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~  161 (338)
T d1udca_          82 GLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILT  161 (338)
T ss_dssp             SCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHH
T ss_pred             CccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHH
Confidence            85                2346889999987  89999999999999876665555554 44677777 99999998874


Q ss_pred             h-----cCCcEEEeecceeeCCCCC-----------cchHHHHHHHHHc-CCCeeecCC------CcceEeeeeHHHHHH
Q 025702          141 S-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLKA-GRPIPIPGS------GIQVTQLGHVKDLAR  197 (249)
Q Consensus       141 ~-----~~~~~~~~r~~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~i~~~D~a~  197 (249)
                      .     .+++++++|++++|||...           ..+++.++..... +.++.+.++      +.+.++|+|++|++.
T Consensus       162 ~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~  241 (338)
T d1udca_         162 DLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLAD  241 (338)
T ss_dssp             HHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred             HHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhh
Confidence            2     4789999999999998532           2345555555543 345555543      667899999999998


Q ss_pred             HHHHHhcC--CCCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          198 AFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       198 ~~~~~~~~--~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      ++..+...  ....+++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       242 ~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~  284 (338)
T d1udca_         242 GHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV  284 (338)
T ss_dssp             HHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCC
T ss_pred             hccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCC
Confidence            88777653  333467899999999999999999999999543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-33  Score=227.46  Aligned_cols=231  Identities=18%  Similarity=0.212  Sum_probs=184.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++||+|++++|.+.......           ....++..+|+.+.+.+..+++  ++|+|||++
T Consensus        21 TGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a   87 (363)
T d2c5aa1          21 TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GVDHVFNLA   87 (363)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------cccCcEEEeechhHHHHHHHhh--cCCeEeecc
Confidence            799999999999999999999999988665522111           2456788899999999999887  999999998


Q ss_pred             CCC-----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCC-------CCCCCCCCCcc-cchH
Q 025702           81 GRE-----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHC-------ETDTVDPKSRH-KGKL  133 (249)
Q Consensus        81 ~~~-----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~-------e~~~~~~~~~~-~~k~  133 (249)
                      +..                 ..++.+++++++  ++++||++||..+|+.....+..       +..+..|.+.| .+|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~  167 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  167 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence            652                 335788899976  88999999999999865444333       33456788888 9999


Q ss_pred             HHHHHHh----hcCCcEEEeecceeeCCCCCc------chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          134 NTESVLE----SKGVNWTSLRPVYIYGPLNYN------PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       134 ~~e~~~~----~~~~~~~~~r~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      .+|++++    +.+++++++||+++||+++..      ..................++++.+.++|+|++|+++++..++
T Consensus       168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~  247 (363)
T d2c5aa1         168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  247 (363)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence            9998874    468999999999999986421      123334445556666777789999999999999999999999


Q ss_pred             cCCCCCCceEEecCCccccHHHHHHHHHHHhCCCccccccCCCC
Q 025702          204 GNEKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVEHRMP  247 (249)
Q Consensus       204 ~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~~~~~~  247 (249)
                      +.+  .++.||+++++.+|+.|+++.+.+.+|.+ ..+...+.|
T Consensus       248 ~~~--~~~~~ni~~~~~~s~~~l~~~i~~~~g~~-~~i~~~~~~  288 (363)
T d2c5aa1         248 KSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKK-LPIHHIPGP  288 (363)
T ss_dssp             HSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCC-CCEEEECCC
T ss_pred             hCC--CCCeEEEecCCcccHHHHHHHHHHHhCCC-CceEeCCCC
Confidence            875  36799999999999999999999999964 444444444

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-33  Score=224.52  Aligned_cols=236  Identities=17%  Similarity=0.141  Sum_probs=186.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCC-chhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-DQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      ||||||||++|+++|+++||+|++++|.+........... .........+++++.+|++|.+.+..++...++++|+|+
T Consensus         7 TG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~   86 (347)
T d1t2aa_           7 TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNL   86 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             ecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccceeeee
Confidence            7999999999999999999999999997654211000000 001111235789999999999999999988899999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC-----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHH
Q 025702           80 NGRE----------------ADEVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~  137 (249)
                      ++..                +.++.+++++++     +.++||++||..|||.....+++|+.+..|.+.| .+|..+|+
T Consensus        87 ~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~  166 (347)
T d1t2aa_          87 GAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYW  166 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             eeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            8752                336778888865     3458999999999998888899999999999989 99999999


Q ss_pred             HHh----hcCCcEEEeecceeeCCCCCcc-----hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          138 VLE----SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       138 ~~~----~~~~~~~~~r~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      ++.    +.+++++++||+++|||.....     ....+........+....+++.+.++++|++|+++++..++++.. 
T Consensus       167 ~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~-  245 (347)
T d1t2aa_         167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-  245 (347)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC-
Confidence            873    4689999999999999964322     222344444566677777899999999999999999999999875 


Q ss_pred             CCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          209 SRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       209 ~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                       .+.|++..+...++.+....+...++...
T Consensus       246 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (347)
T d1t2aa_         246 -PEDFVIATGEVHSVREFVEKSFLHIGKTI  274 (347)
T ss_dssp             -CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred             -Cccceeccccccccchhhhhhhhhhccee
Confidence             36788999999999999999999998643

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=6.3e-33  Score=223.32  Aligned_cols=236  Identities=17%  Similarity=0.139  Sum_probs=187.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++|++|.++.++.........    ........+++++.+|++|.+.+..++.  +++.|+|+|
T Consensus         8 TGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~----~~~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~~~a   81 (346)
T d1oc2a_           8 TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA----NLEAILGDRVELVVGDIADAELVDKLAA--KADAIVHYA   81 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG----GTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHH----HHHHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhhhhh
Confidence            7999999999999999999877666654322110000    0000114689999999999999999998  899999998


Q ss_pred             CCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCC------------CCCCCCCCCCCCCCCcc-c
Q 025702           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKS------------DLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~------------~~~~~~e~~~~~~~~~~-~  130 (249)
                      +..                ..++.++++++. ...++|++||..+||..            ......++.+..|.+.| .
T Consensus        82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~  161 (346)
T d1oc2a_          82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSS  161 (346)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHH
T ss_pred             hcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHH
Confidence            752                346888898887 44689999999999742            12345566677888888 9


Q ss_pred             chHHHHHHHh----hcCCcEEEeecceeeCCCCC-cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          131 GKLNTESVLE----SKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       131 ~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      +|..+|.+++    +.+++++++||+++|||+.. ...+..++.....+.++..++++.+.++++|++|+|++++.++.+
T Consensus       162 sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~  241 (346)
T d1oc2a_         162 TKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK  241 (346)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhh
Confidence            9999998874    56899999999999999753 456677777778888888889999999999999999999999887


Q ss_pred             CCCCCceEEecCCccccHHHHHHHHHHHhCCCcccccc
Q 025702          206 EKASRQVFNISGEKYVTFDGLARACAKVTGYCIAGSVE  243 (249)
Q Consensus       206 ~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~~~~~  243 (249)
                      +. .++.|++++++..++.++++.+.+.++.+...+.+
T Consensus       242 ~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  278 (346)
T d1oc2a_         242 GR-MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH  278 (346)
T ss_dssp             CC-TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEE
T ss_pred             cc-cCccccccccccccchHHHHHHHHHhCCCCcceEE
Confidence            76 47799999999999999999999999976655544

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=9.9e-33  Score=219.94  Aligned_cols=232  Identities=18%  Similarity=0.138  Sum_probs=187.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|++.|+++||+|++++|........     .-......++++++.+|+.|.+.+...+....+++++|++
T Consensus         6 tG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-----~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           6 TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRW-----RLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCH-----HHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHH-----HHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            79999999999999999999999999976542110     0000112468999999999999999999877899999997


Q ss_pred             CC----------------ChhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh
Q 025702           81 GR----------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE  140 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~  140 (249)
                      +.                +..++.+++++++  + .++|+++||..+||.......+|+.+..|.+.| .+|..+|.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            75                2346788999976  4 568999999999998888888899999999999 99999999874


Q ss_pred             ----hcCCcEEEeecceeeCCCCCcc----hHHHHHHHHHcC-CCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCc
Q 025702          141 ----SKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAG-RPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQ  211 (249)
Q Consensus       141 ----~~~~~~~~~r~~~v~g~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  211 (249)
                          +.+++++++||+++|||.....    .+..++.+...+ .+....+++.+.++|+|++|+|+++..+++++.  ++
T Consensus       161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~~  238 (321)
T d1rpna_         161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--AD  238 (321)
T ss_dssp             HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CC
T ss_pred             HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--cC
Confidence                4689999999999999964332    233334444443 444556888999999999999999999999875  47


Q ss_pred             eEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          212 VFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       212 ~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      .||+++++..|+.++++.+.+.+|.+.+
T Consensus       239 ~~ni~~~~~~s~~~~~~~~~~~~~~~~~  266 (321)
T d1rpna_         239 DYVVATGVTTTVRDMCQIAFEHVGLDYR  266 (321)
T ss_dssp             CEEECCSCEEEHHHHHHHHHHTTTCCGG
T ss_pred             CceecccccceehhhhHHHHHHhCCCcc
Confidence            8999999999999999999999986543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-32  Score=221.62  Aligned_cols=228  Identities=19%  Similarity=0.209  Sum_probs=182.3

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHH-hhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-SLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~-~~~~~~~d~Vi~   78 (249)
                      ||||||||++|+++|+++| ++|+++++..........          .++++++.+|+++.+.+.+ .++  ++|+|||
T Consensus         6 TG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----------~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih   73 (342)
T d2blla1           6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----------HPHFHFVEGDISIHSEWIEYHVK--KCDVVLP   73 (342)
T ss_dssp             ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----------CTTEEEEECCTTTCSHHHHHHHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----------CCCeEEEECccCChHHHHHHHHh--CCCcccc
Confidence            7999999999999999999 589999987655333322          3689999999988766554 555  8999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCC-------CCCCCCcc-cchH
Q 025702           79 INGRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETD-------TVDPKSRH-KGKL  133 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~-------~~~~~~~~-~~k~  133 (249)
                      +|+..                +.++.++++++. ...+++++||..+|+........+..       ...|...| .+|.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~  153 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  153 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred             ccccccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhccc
Confidence            99862                346888999987 55678899999999876655444432       23455567 8999


Q ss_pred             HHHHHHh----hcCCcEEEeecceeeCCCCC---------cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          134 NTESVLE----SKGVNWTSLRPVYIYGPLNY---------NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       134 ~~e~~~~----~~~~~~~~~r~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .+|++++    +.+++++++|++.+||+...         ......++.++.++.++.+++++.+.++++|++|+++++.
T Consensus       154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~  233 (342)
T d2blla1         154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (342)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence            9999874    46899999999999998521         2257788888999999999999999999999999999999


Q ss_pred             HHhcCC--CCCCceEEecCCc-cccHHHHHHHHHHHhCCCccc
Q 025702          201 QVLGNE--KASRQVFNISGEK-YVTFDGLARACAKVTGYCIAG  240 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~-~~s~~~l~~~~~~~~g~~~~~  240 (249)
                      .+++++  ...+++||+++++ .+|+.|+++.+.+.+|.....
T Consensus       234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~  276 (342)
T d2blla1         234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR  276 (342)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTG
T ss_pred             eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccc
Confidence            999885  3357899998765 589999999999999854433

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=1.5e-31  Score=215.23  Aligned_cols=235  Identities=19%  Similarity=0.224  Sum_probs=178.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|++.|+++|++|+++++..........    ..-.....+++++.+|++|.+.++.+++..++|+|||+|
T Consensus         7 TGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~----~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   82 (347)
T d1z45a2           7 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA----RLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA   82 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH----HHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred             eCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH----hHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence            7999999999999999999999999875443211000    000112467999999999999999999888999999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCC----CCCCCCCCCCCCCCcc-cchHHHHH
Q 025702           81 GRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSD----LLPHCETDTVDPKSRH-KGKLNTES  137 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~----~~~~~e~~~~~~~~~~-~~k~~~e~  137 (249)
                      +..                ..++.+++++++  ++++||++||..+||...    ..++.|+.+..|.+.| .+|..+|.
T Consensus        83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~  162 (347)
T d1z45a2          83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIEN  162 (347)
T ss_dssp             SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHH
Confidence            862                345788999987  889999999999998543    3557778888888888 99999998


Q ss_pred             HHh------hcCCcEEEeecceeeCCCCC-----------cchHHHHHHHHH-cCCCeeecCCC------cceEeeeeHH
Q 025702          138 VLE------SKGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLK-AGRPIPIPGSG------IQVTQLGHVK  193 (249)
Q Consensus       138 ~~~------~~~~~~~~~r~~~v~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~i~~~  193 (249)
                      +++      ..+++++++|++++||+...           ..+++.+...+. .+.++.+++++      ...++++++.
T Consensus       163 ~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~  242 (347)
T d1z45a2         163 ILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV  242 (347)
T ss_dssp             HHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHH
T ss_pred             HHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeee
Confidence            774      24789999999999986421           124444444443 34455555544      3467888999


Q ss_pred             HHHHHHHHHhcC------CCCCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          194 DLARAFVQVLGN------EKASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       194 D~a~~~~~~~~~------~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      |++.+++.+++.      ....+++||+++++++|+.|+++.+.+.+|.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~  294 (347)
T d1z45a2         243 DLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP  294 (347)
T ss_dssp             HHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCC
T ss_pred             cccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCc
Confidence            999988888753      2234678999999999999999999999996543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.98  E-value=1.7e-31  Score=218.50  Aligned_cols=234  Identities=17%  Similarity=0.173  Sum_probs=176.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCcc-------ccCCCCCCc----hhh-hhccCceEEEEeccCCHHHHHHhh
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-------AQQLPGESD----QEF-AEFSSKILHLKGDRKDYDFVKSSL   68 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~-------~~~~~~~~~----~~~-~~~~~~v~~~~~d~~d~~~l~~~~   68 (249)
                      ||||||||++|+++|++.||+|++++.-....       ....+....    ..+ .....+++++.+|++|.+.+.+++
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~   86 (393)
T d1i24a_           7 IGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESF   86 (393)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHH
Confidence            79999999999999999999999997321100       000000000    001 112467999999999999999999


Q ss_pred             hhCCCcEEEecCCC-------------------ChhhhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCC--------
Q 025702           69 SAKGFDVVYDINGR-------------------EADEVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHC--------  118 (249)
Q Consensus        69 ~~~~~d~Vi~~~~~-------------------~~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~--------  118 (249)
                      ++.++|+|||+|+.                   ++.++.+++++++  + .++++++||..+|+.... +..        
T Consensus        87 ~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~~~~~~~  165 (393)
T d1i24a_          87 KSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITH  165 (393)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSEEEEEE
T ss_pred             HhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccccccccccc
Confidence            98889999999975                   2346888999987  4 456788888888864321 111        


Q ss_pred             ------CCCCCCCCCcc-cchHHHHHHH----hhcCCcEEEeecceeeCCCCC------------------cchHHHHHH
Q 025702          119 ------ETDTVDPKSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY------------------NPVEEWFFH  169 (249)
Q Consensus       119 ------e~~~~~~~~~~-~~k~~~e~~~----~~~~~~~~~~r~~~v~g~~~~------------------~~~~~~~~~  169 (249)
                            +..+..|.+.| .+|..+|.++    ++.+++++++||+++|||...                  ...+..++.
T Consensus       166 ~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  245 (393)
T d1i24a_         166 NGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCV  245 (393)
T ss_dssp             TTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHH
T ss_pred             cccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhH
Confidence                  11245677778 9999999887    467899999999999998632                  224677888


Q ss_pred             HHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEe-cCCccccHHHHHHHHHHHhC
Q 025702          170 RLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNI-SGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +...++++.+++++.+.++|+|++|+++++..+++++...++.+.+ .+++.+|+.++++++.+..+
T Consensus       246 ~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~  312 (393)
T d1i24a_         246 QAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGS  312 (393)
T ss_dssp             HHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred             HhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHH
Confidence            8889999999999999999999999999999999987765544332 45577999999999988764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.98  E-value=2e-30  Score=207.91  Aligned_cols=235  Identities=16%  Similarity=0.115  Sum_probs=176.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCc-hhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESD-QEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      ||||||||++|+++|+++||+|++++|.............. .........++++.+|+.+.+.+...++..++|+|||+
T Consensus         7 TGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~   86 (339)
T d1n7ha_           7 TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNL   86 (339)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccchhhhc
Confidence            79999999999999999999999999975432111100000 00011135688999999999999999987799999999


Q ss_pred             CCCC----------------hhhhHHHHHhCC-------CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHH
Q 025702           80 NGRE----------------ADEVEPILDALP-------NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNT  135 (249)
Q Consensus        80 ~~~~----------------~~~~~~~~~a~~-------~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~  135 (249)
                      |+..                ..++.+++++++       ...++++.||..+|+.. ..+++|+.+..|.+.| .+|..+
T Consensus        87 Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~~~Y~~sK~~~  165 (339)
T d1n7ha_          87 AAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPRSPYAASKCAA  165 (339)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             cccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCCCCcchhhHHHHHH
Confidence            9863                223566666654       34578888888887654 3567899999999999 999999


Q ss_pred             HHHH----hhcCCcEEEeecceeeCCCCCcch----HHHHHHH-HHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          136 ESVL----ESKGVNWTSLRPVYIYGPLNYNPV----EEWFFHR-LKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       136 e~~~----~~~~~~~~~~r~~~v~g~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                      |.++    +..+++++++||+++|||......    +...... ........+.+++.+.++++|++|+++++..+++++
T Consensus       166 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         166 HWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence            9876    457899999999999999743322    2222223 333444556688889999999999999999999997


Q ss_pred             CCCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          207 KASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       207 ~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      ..  ..+++..+...+..++++.+.+.+|...
T Consensus       246 ~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~  275 (339)
T d1n7ha_         246 KP--DDYVVATEEGHTVEEFLDVSFGYLGLNW  275 (339)
T ss_dssp             SC--CEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             CC--Cccccccccccccchhhhhhhhhhhccc
Confidence            63  5677778888999999999999999653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.3e-30  Score=206.64  Aligned_cols=239  Identities=19%  Similarity=0.199  Sum_probs=179.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCC-chhh-hhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES-DQEF-AEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||+|++|+++|+++|++|++++|............. .... .....+++++.+|++|.+.+.+.+....+++|+|
T Consensus         8 TG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h   87 (346)
T d1ek6a_           8 TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIH   87 (346)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEEEEEE
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccccccc
Confidence            7999999999999999999999999875444222111100 0111 1124679999999999999999998888999999


Q ss_pred             cCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCC-CCCCCCcc-cchHHHHHH
Q 025702           79 INGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETD-TVDPKSRH-KGKLNTESV  138 (249)
Q Consensus        79 ~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~-~~~~~~~~-~~k~~~e~~  138 (249)
                      +|+..                +.++.+++++++  ++++||++||..+|+........+.. ...+.++| .+|..+|..
T Consensus        88 ~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~  167 (346)
T d1ek6a_          88 FAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (346)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             cccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHH
Confidence            99862                346788999987  88999999999999876554444333 34566667 999999987


Q ss_pred             Hhh-----cCCcEEEeecceeeCCCCC-----------cchHHHHHHHHH-cCCCeeecC------CCcceEeeeeHHHH
Q 025702          139 LES-----KGVNWTSLRPVYIYGPLNY-----------NPVEEWFFHRLK-AGRPIPIPG------SGIQVTQLGHVKDL  195 (249)
Q Consensus       139 ~~~-----~~~~~~~~r~~~v~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~  195 (249)
                      +++     .+++.+++|++.+||+...           ..+++.+...+. ++.++.+.+      ++.+.++|+|++|+
T Consensus       168 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~  247 (346)
T d1ek6a_         168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDL  247 (346)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEec
Confidence            642     5889999999999998531           234555555443 344444433      45677999999999


Q ss_pred             HHHHHHHhcC--CCCCCceEEecCCccccHHHHHHHHHHHhCCCcc
Q 025702          196 ARAFVQVLGN--EKASRQVFNISGEKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      |.++..++..  ....+++||+++++.+++.|+++.+.+.+|.+.+
T Consensus       248 a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~  293 (346)
T d1ek6a_         248 AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP  293 (346)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred             cchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCC
Confidence            9999887644  2335679999999999999999999999996543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.97  E-value=8.3e-30  Score=207.68  Aligned_cols=240  Identities=21%  Similarity=0.264  Sum_probs=177.0

Q ss_pred             CCCcccchHHHHHHHHH-cCCeEEEEecCCCccccCCCCCCchh------------hhhccCceEEEEeccCCHHHHHHh
Q 025702            1 MGGTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQE------------FAEFSSKILHLKGDRKDYDFVKSS   67 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~v~~~~~d~~d~~~l~~~   67 (249)
                      ||||||||++|+++|++ .||+|+++++-...............            .......+.++.+|++|.+.++++
T Consensus         8 TG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (383)
T d1gy8a_           8 CGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGV   87 (383)
T ss_dssp             ETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhhhh
Confidence            79999999999999996 68999999853222111100000000            001134688999999999999999


Q ss_pred             hhhC-CCcEEEecCCCC----------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCC-------CCCCCCC
Q 025702           68 LSAK-GFDVVYDINGRE----------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDL-------LPHCETD  121 (249)
Q Consensus        68 ~~~~-~~d~Vi~~~~~~----------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~-------~~~~e~~  121 (249)
                      ++.. ++|+|||+|+..                ..++.+++++++  ++++++++||..+|+....       .+..|+.
T Consensus        88 ~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~  167 (383)
T d1gy8a_          88 FTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA  167 (383)
T ss_dssp             HHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTS
T ss_pred             hhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccccccccc
Confidence            9754 569999999862                345788888877  7899999999999975432       4566777


Q ss_pred             CCCCCCcc-cchHHHHHHHh----hcCCcEEEeecceeeCCCCCc----------chHHHHHHHHH--------------
Q 025702          122 TVDPKSRH-KGKLNTESVLE----SKGVNWTSLRPVYIYGPLNYN----------PVEEWFFHRLK--------------  172 (249)
Q Consensus       122 ~~~~~~~~-~~k~~~e~~~~----~~~~~~~~~r~~~v~g~~~~~----------~~~~~~~~~~~--------------  172 (249)
                      +..|.+.| .+|...|++++    ..+++++++||+++|||+...          ..++.++.++.              
T Consensus       168 ~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~  247 (383)
T d1gy8a_         168 KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED  247 (383)
T ss_dssp             CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred             CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhh
Confidence            78889988 99999999874    468999999999999987532          23333333321              


Q ss_pred             --cCCCeeecC------CCcceEeeeeHHHHHHHHHHHhcCC--------CCCCceEEecCCccccHHHHHHHHHHHhCC
Q 025702          173 --AGRPIPIPG------SGIQVTQLGHVKDLARAFVQVLGNE--------KASRQVFNISGEKYVTFDGLARACAKVTGY  236 (249)
Q Consensus       173 --~~~~~~~~~------~~~~~~~~i~~~D~a~~~~~~~~~~--------~~~~~~~~i~~~~~~s~~~l~~~~~~~~g~  236 (249)
                        .+.++..++      ++.+.++|+|++|++++++.+++..        ...+++||+++++.+|+.|+++.+.+.+|.
T Consensus       248 ~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~  327 (383)
T d1gy8a_         248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH  327 (383)
T ss_dssp             ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCC
T ss_pred             hhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCC
Confidence              233344333      4677899999999999999998641        224678999999999999999999999996


Q ss_pred             Cccc
Q 025702          237 CIAG  240 (249)
Q Consensus       237 ~~~~  240 (249)
                      +.+.
T Consensus       328 ~~~~  331 (383)
T d1gy8a_         328 PIPV  331 (383)
T ss_dssp             CCCE
T ss_pred             CCce
Confidence            6543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.97  E-value=8.3e-31  Score=204.84  Aligned_cols=206  Identities=19%  Similarity=0.181  Sum_probs=176.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|.++||+|++++|+.                          .|+.|.++++++++..++|+|||++
T Consensus         7 tGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------~D~~d~~~~~~~l~~~~~d~vih~a   60 (281)
T d1vl0a_           7 TGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------LDITNVLAVNKFFNEKKPNVVINCA   60 (281)
T ss_dssp             ESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------ccCCCHHHHHHHHHHcCCCEEEeec
Confidence            79999999999999999999999998862                          2788999999999988999999998


Q ss_pred             CCChh----------------hhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           81 GREAD----------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        81 ~~~~~----------------~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +....                ....+.+.+. ....++++||..+|+.....+..|.++..|...| ..|...|+++++.
T Consensus        61 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_          61 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence            87421                2333444444 5678999999999999888889999999999888 9999999999999


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecCCcccc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVT  222 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (249)
                      +.+++++||+++||++  .++...++..+..+..+...+  +..++++|++|+++++..++++..  .+.||+++++.+|
T Consensus       141 ~~~~~i~R~~~vyG~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~~~~~s  214 (281)
T d1vl0a_         141 NPKYYIVRTAWLYGDG--NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN--YGTFHCTCKGICS  214 (281)
T ss_dssp             CSSEEEEEECSEESSS--SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC--CEEEECCCBSCEE
T ss_pred             CCCccccceeEEeCCC--cccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc--cCceeEeCCCccc
Confidence            9999999999999996  346667788888887776655  478999999999999999998875  3699999999999


Q ss_pred             HHHHHHHHHHHhCCCc
Q 025702          223 FDGLARACAKVTGYCI  238 (249)
Q Consensus       223 ~~~l~~~~~~~~g~~~  238 (249)
                      +.|+++.+.+.+|.+.
T Consensus       215 ~~e~~~~i~~~~g~~~  230 (281)
T d1vl0a_         215 WYDFAVEIFRLTGIDV  230 (281)
T ss_dssp             HHHHHHHHHHHHCCCC
T ss_pred             hHHHHHHHHHHhCCCc
Confidence            9999999999999653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=3.7e-30  Score=204.44  Aligned_cols=213  Identities=21%  Similarity=0.279  Sum_probs=171.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++|+.|+++++...                         .|+.|.+.+..+++...+|.|+|++
T Consensus         8 TG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           8 AGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------------------LNLLDSRAVHDFFASERIDQVYLAA   62 (315)
T ss_dssp             ETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EcCCcHHHHHHHHHHHHCcCEEEEecCchh-------------------------ccccCHHHHHHHHhhcCCCEEEEcc
Confidence            799999999999999999999987654421                         3888999999999888899999998


Q ss_pred             CC-----------------ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCC-----CCCcc-cchHHH
Q 025702           81 GR-----------------EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD-----PKSRH-KGKLNT  135 (249)
Q Consensus        81 ~~-----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~-----~~~~~-~~k~~~  135 (249)
                      +.                 ++.++.+++++|.  ++++|||+||..+||.....+++|+.+..     |.+.| .+|..+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  142 (315)
T d1e6ua_          63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG  142 (315)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence            65                 2346888999986  88999999999999988777777765432     22346 999999


Q ss_pred             HHHHh----hcCCcEEEeecceeeCCCCCc-----chHH-----HHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          136 ESVLE----SKGVNWTSLRPVYIYGPLNYN-----PVEE-----WFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       136 e~~~~----~~~~~~~~~r~~~v~g~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      |++++    +.+++++++||+++|||++..     ....     ........+..+...+++.+.++++|++|+++++..
T Consensus       143 E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~  222 (315)
T d1e6ua_         143 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  222 (315)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHH
Confidence            99874    568999999999999997431     1222     233445567778888888899999999999999999


Q ss_pred             HhcCCC--------CCCceEEecCCccccHHHHHHHHHHHhCCCc
Q 025702          202 VLGNEK--------ASRQVFNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       202 ~~~~~~--------~~~~~~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      ++.+..        .....++++.+...+..++++.+.+.+|.+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~  267 (315)
T d1e6ua_         223 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG  267 (315)
T ss_dssp             HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS
T ss_pred             hhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCc
Confidence            997642        2356799999999999999999999999654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.96  E-value=6.9e-29  Score=198.65  Aligned_cols=234  Identities=20%  Similarity=0.283  Sum_probs=171.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++|++|+++++-.......     ........++++++.+|++|.+.+.++++..++|+|||+|
T Consensus         6 TGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~-----~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           6 TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATD-----NLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchh-----HHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            79999999999999999999999998643321100     0011112468999999999999999999977899999999


Q ss_pred             CC----------------ChhhhHHHHHhCC--CCCeEEEeecccc-ccCCCCC----------------CCCCCCCCCC
Q 025702           81 GR----------------EADEVEPILDALP--NLEQFIYCSSAGV-YLKSDLL----------------PHCETDTVDP  125 (249)
Q Consensus        81 ~~----------------~~~~~~~~~~a~~--~~~~~i~~Ss~~v-~~~~~~~----------------~~~e~~~~~~  125 (249)
                      +.                |+.++.++++++.  +++++|+.||..+ ++.....                ...+..+..|
T Consensus        81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence            86                2457889999977  6666666665554 4432221                1223334456


Q ss_pred             CCcc-cchHHHHHHH----hhcCCcEEEeecceeeCCCCC----cchHHHHHHHHH-----cCCCeeecCCCcceEeeee
Q 025702          126 KSRH-KGKLNTESVL----ESKGVNWTSLRPVYIYGPLNY----NPVEEWFFHRLK-----AGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~----~~~~~~~~~~r~~~v~g~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~  191 (249)
                      .+.| .+|...|.++    +..+....++|++.+|++...    ....+.++..+.     .+.++.+++++.+.++|+|
T Consensus       161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~  240 (338)
T d1orra_         161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  240 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence            6666 7788888775    457889999999999976532    234444544433     3667888899999999999


Q ss_pred             HHHHHHHHHHHhcCCC-CCCceEEecC--CccccHHHHHHHHHHHhCCCcc
Q 025702          192 VKDLARAFVQVLGNEK-ASRQVFNISG--EKYVTFDGLARACAKVTGYCIA  239 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~~-~~~~~~~i~~--~~~~s~~~l~~~~~~~~g~~~~  239 (249)
                      ++|++++++.+++++. ..++.|++..  +..+++.|+++.+.+.+|.+.+
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~  291 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR  291 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC
T ss_pred             ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCce
Confidence            9999999999998743 3578898854  4579999999999999996543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.96  E-value=4.8e-29  Score=200.16  Aligned_cols=228  Identities=14%  Similarity=0.060  Sum_probs=166.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+||||++|+++|+++|++|++++|+..+......   .............+.+|+.|.+.+.+++.  ++|+|+|++
T Consensus        17 TG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v~~~a   91 (342)
T d1y1pa1          17 TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK---RWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVAHIA   91 (342)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHH---hhhccccccccEEEeccccchhhhhhhcc--cchhhhhhc
Confidence            7999999999999999999999999998654211000   00000012334557799999999999998  999999998


Q ss_pred             CC-------------ChhhhHHHHHhCC---CCCeEEEeeccccccCCC---CCC-----------------CCCCCCCC
Q 025702           81 GR-------------EADEVEPILDALP---NLEQFIYCSSAGVYLKSD---LLP-----------------HCETDTVD  124 (249)
Q Consensus        81 ~~-------------~~~~~~~~~~a~~---~~~~~i~~Ss~~v~~~~~---~~~-----------------~~e~~~~~  124 (249)
                      +.             ++.++.+++++|.   ++++|||+||..+++...   ...                 ..++.+..
T Consensus        92 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  171 (342)
T d1y1pa1          92 SVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK  171 (342)
T ss_dssp             CCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred             ccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence            86             3456889999865   589999999976543211   111                 22333445


Q ss_pred             CCCcc-cchHHHHHHH----hh--cCCcEEEeecceeeCCCC----CcchHHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          125 PKSRH-KGKLNTESVL----ES--KGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~----~~--~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      |.+.| .+|..+|.++    ++  .+++++++||+.+|||..    .......++..+.++...... .+.+.++|+|++
T Consensus       172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~  250 (342)
T d1y1pa1         172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHH
T ss_pred             CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeHH
Confidence            55567 9999999865    33  357788999999999852    234566677777777654332 344568999999


Q ss_pred             HHHHHHHHHhcCCCCCCceEEecCCccccHHHHHHHHHHHhC
Q 025702          194 DLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       194 D~a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      |+|++++.+++++...+ .|++++++.+|+.|+++++.+.++
T Consensus       251 Dva~~~i~~l~~~~~~g-~~~~~~~~~~t~~eia~~i~k~~p  291 (342)
T d1y1pa1         251 DIGLLHLGCLVLPQIER-RRVYGTAGTFDWNTVLATFRKLYP  291 (342)
T ss_dssp             HHHHHHHHHHHCTTCCS-CEEEECCEEECHHHHHHHHHHHCT
T ss_pred             HHHHHHHHhhcCccccc-eEEEEcCCceEHHHHHHHHHHHcC
Confidence            99999999999877545 566788899999999999999974

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-28  Score=183.15  Aligned_cols=184  Identities=16%  Similarity=0.212  Sum_probs=146.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||||++|++++++|+++||+|++++|++.+.....           ..+++++.+|+.|.+++.++++  ++|+|||++
T Consensus         9 ~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~   75 (205)
T d1hdoa_           9 FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----------PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLL   75 (205)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----------CCCSEEEESCTTSHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-----------ccccccccccccchhhHHHHhc--CCCEEEEEe
Confidence            699999999999999999999999999987743322           2679999999999999999998  999999998


Q ss_pred             CCC---------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEe
Q 025702           81 GRE---------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSL  149 (249)
Q Consensus        81 ~~~---------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~  149 (249)
                      +..         ...+++++++++  +++|||++||.+++++....      +.....++..|..+|+++++.+++|+++
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------~~~~~~~~~~~~~~e~~l~~~~~~~tii  149 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------PPRLQAVTDDHIRMHKVLRESGLKYVAV  149 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------CGGGHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------cccccccchHHHHHHHHHHhcCCceEEE
Confidence            753         235788999987  89999999999887553221      1111123477888999999999999999


Q ss_pred             ecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecC
Q 025702          150 RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (249)
Q Consensus       150 r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (249)
                      ||+.+++....              ....+..++.....+++.+|+|++++.+++++...++.+.++.
T Consensus       150 rp~~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         150 MPPHIGDQPLT--------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             CCSEEECCCCC--------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             ecceecCCCCc--------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            99999875321              1223334556667899999999999999999887788777654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=1.9e-28  Score=193.79  Aligned_cols=226  Identities=12%  Similarity=0.095  Sum_probs=167.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++|+++|+++||+|++++|++........   .........+++++.+|+.|.+.+.+.++  +++++++++
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~~~~~   83 (312)
T d1qyda_           9 VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKV---QMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVVISAL   83 (312)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHH---HHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHH---HHHhhhccCCcEEEEeecccchhhhhhcc--Ccchhhhhh
Confidence            7999999999999999999999999998665211000   00001123679999999999999999998  999999987


Q ss_pred             CC-----ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhcCCcEEEeecc
Q 025702           81 GR-----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPV  152 (249)
Q Consensus        81 ~~-----~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~~~r~~  152 (249)
                      +.     +.....++++++.  ...++++.||.+++...      +..+..|...+ ..+..++++.+..+++++++||+
T Consensus        84 ~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~  157 (312)
T d1qyda_          84 AGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSN  157 (312)
T ss_dssp             CCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECC
T ss_pred             hhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cccccchhhhhhHHHHHHHHhhcccccceEEeccc
Confidence            64     3456777777765  66788888887665332      22233344444 77888888888899999999999


Q ss_pred             eeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCce-EEecCCccccHHHHHHHHH
Q 025702          153 YIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACA  231 (249)
Q Consensus       153 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~l~~~~~  231 (249)
                      .+||+..... ...+......+..+.+++++++.++++|++|+|++++.++.++...++. |++++++.+|+.|+++.++
T Consensus       158 ~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~  236 (312)
T d1qyda_         158 MFAGYFAGSL-AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWE  236 (312)
T ss_dssp             EEHHHHTTTS-SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHH
T ss_pred             eeecCCccch-hhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHH
Confidence            9999632110 0001111224455677788899999999999999999999998766665 5666677899999999999


Q ss_pred             HHhCCCc
Q 025702          232 KVTGYCI  238 (249)
Q Consensus       232 ~~~g~~~  238 (249)
                      +.+|.+.
T Consensus       237 ~~~g~~~  243 (312)
T d1qyda_         237 RLSEQNL  243 (312)
T ss_dssp             HHHTCCC
T ss_pred             HHHCCCC
Confidence            9999653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.94  E-value=3.9e-26  Score=183.91  Aligned_cols=231  Identities=15%  Similarity=0.173  Sum_probs=173.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||||++|+++|+++|++|++++|+..+....+      ......++++++.+|++|.+.+.++++...+++|+|++
T Consensus        14 TG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~------~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_          14 TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF------ETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHH------HHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHH------hhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            799999999999999999999999999877633211      01111357999999999999999999888999999999


Q ss_pred             CCC----------------hhhhHHHHHhCC--C-CCeEEEeeccccccC-CCCCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           81 GRE----------------ADEVEPILDALP--N-LEQFIYCSSAGVYLK-SDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~--~-~~~~i~~Ss~~v~~~-~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      +..                +.++.+++++++  + ...+++.|+..++.. ....+..++.+..|.+.| .+|...|..+
T Consensus        88 a~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~  167 (356)
T d1rkxa_          88 AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVT  167 (356)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhh
Confidence            862                335788899876  4 445555555555443 334456666777788887 8888877654


Q ss_pred             h-------------hcCCcEEEeecceeeCCCCC--cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhc
Q 025702          140 E-------------SKGVNWTSLRPVYIYGPLNY--NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLG  204 (249)
Q Consensus       140 ~-------------~~~~~~~~~r~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~  204 (249)
                      +             ..++.++++||+++|||++.  ..+++.++.....+.++ ..+.+.+.++++|++|++.++..++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         168 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             hHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCce-EEeeccccccccccccccchhhhhhh
Confidence            2             34678999999999999853  35666777777666654 45777888999999999999999887


Q ss_pred             CCCC----CCce--EEecCCccccHHHHHHHHHHHhCCCc
Q 025702          205 NEKA----SRQV--FNISGEKYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       205 ~~~~----~~~~--~~i~~~~~~s~~~l~~~~~~~~g~~~  238 (249)
                      ++..    .+..  +....+..+++.++++.+.+.+|...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  286 (356)
T d1rkxa_         247 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA  286 (356)
T ss_dssp             HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred             hhcccccccccccccccccccccccchhhhhhHHHhCCCc
Confidence            6322    2223  33344567999999999999999543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=176.11  Aligned_cols=185  Identities=18%  Similarity=0.187  Sum_probs=142.4

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||+|++|+++|+++|+  +|++++|++.......           ...++...+|+.+.+.+...++  ++|+|||
T Consensus        20 tGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----------~~~i~~~~~D~~~~~~~~~~~~--~~d~vi~   86 (232)
T d2bkaa1          20 LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ--GHDVGFC   86 (232)
T ss_dssp             ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS--SCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----------cceeeeeeeccccccccccccc--ccccccc
Confidence            79999999999999999984  8999999876532211           3578888899999999999998  9999999


Q ss_pred             cCCCC-------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           79 INGRE-------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        79 ~~~~~-------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +++..             ...+.++++++.  ++++||++||.+++..             +.+.| .+|..+|+.+++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~-------------~~~~Y~~~K~~~E~~l~~~  153 (232)
T d2bkaa1          87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL  153 (232)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT
T ss_pred             cccccccccchhhhhhhcccccceeeecccccCccccccCCccccccC-------------ccchhHHHHHHhhhccccc
Confidence            99863             235677888876  8999999999887522             23456 9999999999988


Q ss_pred             CCc-EEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCceEEecC
Q 025702          143 GVN-WTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISG  217 (249)
Q Consensus       143 ~~~-~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~  217 (249)
                      +++ ++|+||+.+||++........+........     .........|+++|+|++++.++.++.. ++.+.+.+
T Consensus       154 ~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         154 KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             cccceEEecCceeecCCCcCcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            875 899999999999765555445544443332     2233334679999999999999988764 45665544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=4.8e-28  Score=190.73  Aligned_cols=224  Identities=14%  Similarity=0.166  Sum_probs=166.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++++++|+++||+|++++|++........  ..........+++++.+|+.+.+.+.+.++  +++.|+|++
T Consensus         9 tGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~vi~~~   84 (307)
T d1qyca_           9 IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK--AQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVVISTV   84 (307)
T ss_dssp             ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH--HHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEEEECC
T ss_pred             ECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH--HHHHHhhccCCcEEEEeecccchhhhhhhh--hceeeeecc
Confidence            7999999999999999999999999998765321100  000001113578999999999999999998  999999998


Q ss_pred             CC-ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhcCCcEEEeecceeeC
Q 025702           81 GR-EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESKGVNWTSLRPVYIYG  156 (249)
Q Consensus        81 ~~-~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~~~~~~~~r~~~v~g  156 (249)
                      +. +.....++++++.  +.+++++.|+......       +.....+...+ ..+...+.++++.+++++++||+++||
T Consensus        85 ~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g  157 (307)
T d1qyca_          85 GSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD-------NVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAG  157 (307)
T ss_dssp             CGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTT-------SCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHH
T ss_pred             cccccchhhHHHHHHHHhccccceeeeccccccc-------cccccccccccccccccccchhhccCCCceecccceecC
Confidence            75 4456778888866  7788888887554221       11222222223 566778888888999999999999999


Q ss_pred             CCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCCCCce-EEecCCccccHHHHHHHHHHHhC
Q 025702          157 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQV-FNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      +....  +..+.....++.....++++++.++++|++|+|++++.++.++...++. |++++++.+|+.|+++.+.+.+|
T Consensus       158 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G  235 (307)
T d1qyca_         158 YFLRS--LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID  235 (307)
T ss_dssp             HHTTT--TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTT
T ss_pred             CCccc--hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHC
Confidence            74211  1112223345556677788899999999999999999999988766655 55677889999999999999999


Q ss_pred             CC
Q 025702          236 YC  237 (249)
Q Consensus       236 ~~  237 (249)
                      .+
T Consensus       236 ~~  237 (307)
T d1qyca_         236 KT  237 (307)
T ss_dssp             SC
T ss_pred             CC
Confidence            65

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.94  E-value=5.1e-26  Score=178.69  Aligned_cols=209  Identities=18%  Similarity=0.175  Sum_probs=165.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      ||||||+|++|++.|++.|+.| ++++....                      +.+|++|.+.++++++..++|+|||+|
T Consensus         6 tG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~----------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A   62 (298)
T d1n2sa_           6 FGKTGQVGWELQRSLAPVGNLI-ALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDVIVNAA   62 (298)
T ss_dssp             ECTTSHHHHHHHHHTTTTSEEE-EECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ECCCCHHHHHHHHHHHhCCCEE-EEECCCcc----------------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence            7999999999999999988744 44444322                      146999999999999878899999999


Q ss_pred             CCC----------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhhc
Q 025702           81 GRE----------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLESK  142 (249)
Q Consensus        81 ~~~----------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~~  142 (249)
                      +..                ...+.+++++++ ...+++++||..+|+.....+.+|+.+..|.+.| .+|..+|++++..
T Consensus        63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence            852                234677888887 5678999999999998888899999999999988 9999999999877


Q ss_pred             CCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC---CCCCCceEEecCCc
Q 025702          143 GVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN---EKASRQVFNISGEK  219 (249)
Q Consensus       143 ~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~~i~~~~  219 (249)
                      .....++|++..++... ......+...+..+..+...+  ....+++|+.|+++++..++..   ....+++||+++++
T Consensus       143 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~  219 (298)
T d1n2sa_         143 CPKHLIFRTSWVYAGKG-NNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG  219 (298)
T ss_dssp             CSSEEEEEECSEECSSS-CCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred             hcccccccccceeeccC-Cccchhhhhhhcccceeeccc--ceeecccccchHHHHHHHHHhhhhccccccccccccCCC
Confidence            77778888777665432 233444555666666665543  4678999999999999888752   33356899999999


Q ss_pred             cccHHHHHHHHHHHhC
Q 025702          220 YVTFDGLARACAKVTG  235 (249)
Q Consensus       220 ~~s~~~l~~~~~~~~g  235 (249)
                      .++..++++.+.+..+
T Consensus       220 ~~~~~~~~~~i~~~~~  235 (298)
T d1n2sa_         220 TTTWHDYAALVFDEAR  235 (298)
T ss_dssp             CEEHHHHHHHHHHHHH
T ss_pred             ceecHHHHHHHHhhhh
Confidence            9999999999887764

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=8.6e-26  Score=178.02  Aligned_cols=220  Identities=17%  Similarity=0.157  Sum_probs=147.2

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHH-HHhhh---hCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-KSSLS---AKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l-~~~~~---~~~~d~   75 (249)
                      ||||||||++|+++|+++|+ +|+++++-.......             ...+....|..+.+.+ ...+.   -..+++
T Consensus         5 TGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           5 TGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-------------NLVDLNIADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGH-------------HHHTSCCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             ecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhh-------------cccccchhhhccchHHHHHHhhhhcccchhh
Confidence            79999999999999999995 788887543331100             0011112233332222 22221   137899


Q ss_pred             EEecCCCC--------------hhhhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHH
Q 025702           76 VYDINGRE--------------ADEVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVL  139 (249)
Q Consensus        76 Vi~~~~~~--------------~~~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~  139 (249)
                      |+|+++..              ...+.++++++. ...++++.||..+++........++.+..|.+.| .+|..+|.++
T Consensus        72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~  151 (307)
T d1eq2a_          72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV  151 (307)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred             hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence            99998752              335667777776 3446788888888776665556666667778888 9999999877


Q ss_pred             h----hcCCcEEEeecceeeCCCCC-----cchHHHHHHHHHcCCCee-ecCCCcceEeeeeHHHHHHHHHHHhcCCCCC
Q 025702          140 E----SKGVNWTSLRPVYIYGPLNY-----NPVEEWFFHRLKAGRPIP-IPGSGIQVTQLGHVKDLARAFVQVLGNEKAS  209 (249)
Q Consensus       140 ~----~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  209 (249)
                      +    +.+++++++||+++|||+..     ......+...+..++... ..+++...++++|++|+++++..++.++.  
T Consensus       152 ~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--  229 (307)
T d1eq2a_         152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--  229 (307)
T ss_dssp             HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred             cccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--
Confidence            4    56899999999999999753     234556666777666543 34677788999999999999999998764  


Q ss_pred             CceEEecCCccccHHHHHHHHHHHhC
Q 025702          210 RQVFNISGEKYVTFDGLARACAKVTG  235 (249)
Q Consensus       210 ~~~~~i~~~~~~s~~~l~~~~~~~~g  235 (249)
                      .+.||+++++..|+.++++++.+..+
T Consensus       230 ~~~~~~~~~~~~si~~i~~~i~~~~~  255 (307)
T d1eq2a_         230 SGIFNLGTGRAESFQAVADATLAYHK  255 (307)
T ss_dssp             CEEEEESCSCCBCHHHHHHHC-----
T ss_pred             ccccccccccchhHHHHHHHHHHhcC
Confidence            47999999999999999999988776

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=6.5e-24  Score=161.89  Aligned_cols=205  Identities=15%  Similarity=0.108  Sum_probs=144.0

Q ss_pred             CCCcccchHHHHHHHHHcCCe--EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ--VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||+|+++++.|+++|++  |+.++|++.+...            ...+++++.+|+.+.+.+.++++  ++|+|||
T Consensus         9 tGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~------------~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~   74 (252)
T d2q46a1           9 TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK------------IGGEADVFIGDITDADSINPAFQ--GIDALVI   74 (252)
T ss_dssp             ESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH------------TTCCTTEEECCTTSHHHHHHHHT--TCSEEEE
T ss_pred             ECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh------------ccCCcEEEEeeeccccccccccc--cceeeEE
Confidence            799999999999999999965  6667787655321            13578999999999999999998  9999999


Q ss_pred             cCCCC-----------------------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           79 INGRE-----------------------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        79 ~~~~~-----------------------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +++..                             ..++.+++....  ..+++.+.|+...+.....      ....+..
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------~~~~~~~  148 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------LNKLGNG  148 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------GGGGGGC
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------ccccccc
Confidence            98751                             234667777755  6778888887666422110      0111122


Q ss_pred             cc-cchHHHHHHHhhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC
Q 025702          128 RH-KGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE  206 (249)
Q Consensus       128 ~~-~~k~~~e~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  206 (249)
                      .+ ..+...+.+....+++++++||+++||+......      ....... ..   .....+++|++|+|++++.+++++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~------~~~~~~~-~~---~~~~~~~i~~~Dva~a~~~~l~~~  218 (252)
T d2q46a1         149 NILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE------LLVGKDD-EL---LQTDTKTVPRADVAEVCIQALLFE  218 (252)
T ss_dssp             CHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSC------EEEESTT-GG---GGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred             chhhhhhhhhhhhhcccccceeecceEEECCCcchhh------hhhccCc-cc---ccCCCCeEEHHHHHHHHHHHhCCc
Confidence            22 4555566667788999999999999999632110      0000000 01   122357899999999999999998


Q ss_pred             CCCCceEEecCCc---cccHHHHHHHHHHHhC
Q 025702          207 KASRQVFNISGEK---YVTFDGLARACAKVTG  235 (249)
Q Consensus       207 ~~~~~~~~i~~~~---~~s~~~l~~~~~~~~g  235 (249)
                      ...+++|||+++.   ..++.++.+++.+..+
T Consensus       219 ~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         219 EAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             GGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             cccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            8788999998743   3567777777766554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.90  E-value=3.4e-24  Score=172.18  Aligned_cols=219  Identities=13%  Similarity=0.061  Sum_probs=156.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH-HHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~-~~l~~~~~~~~~d~Vi~~   79 (249)
                      ||||||+|++|+++|+++||+|++++|++++...        ......++++++.+|+.|. +.++.++.  +++++++.
T Consensus         9 tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--------~~~~~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~~   78 (350)
T d1xgka_           9 VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--------EELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN   78 (350)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--------HHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred             ECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--------hhhcccCCCEEEEeeCCCcHHHHHHHhc--CCceEEee
Confidence            7999999999999999999999999998776321        0111136899999999884 55777887  88988876


Q ss_pred             CCC----ChhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcccchHHHHHHHhhcCCcEEEeecce
Q 025702           80 NGR----EADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVY  153 (249)
Q Consensus        80 ~~~----~~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~k~~~e~~~~~~~~~~~~~r~~~  153 (249)
                      ...    +.....++++++.  +++++++.||.......        .......++.+|...|.++++.+.+++++|++.
T Consensus        79 ~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~--------~~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~  150 (350)
T d1xgka_          79 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY--------GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGI  150 (350)
T ss_dssp             CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGT--------SSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECE
T ss_pred             cccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccC--------CcccchhhhhhHHHHHHHHHhhccCceeeeece
Confidence            443    3456788999976  78888888886543221        111223334788999999999999999999999


Q ss_pred             eeCCCCCcchHHHHHHHHHcCC-CeeecCCCcceEeeeeH-HHHHHHHHHHhcCCC--CCCceEEecCCccccHHHHHHH
Q 025702          154 IYGPLNYNPVEEWFFHRLKAGR-PIPIPGSGIQVTQLGHV-KDLARAFVQVLGNEK--ASRQVFNISGEKYVTFDGLARA  229 (249)
Q Consensus       154 v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~-~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s~~~l~~~  229 (249)
                      +++.................+. ....+.+++..++++++ +|+++++..++.++.  ..|+.|++++ +.+|+.|++++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~  229 (350)
T d1xgka_         151 YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAA  229 (350)
T ss_dssp             EGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHH
T ss_pred             eeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHH
Confidence            8874311100000000011111 23445566777888886 799999999997643  3578898887 67999999999


Q ss_pred             HHHHhCCCc
Q 025702          230 CAKVTGYCI  238 (249)
Q Consensus       230 ~~~~~g~~~  238 (249)
                      +.+.+|.+.
T Consensus       230 l~~~~G~~v  238 (350)
T d1xgka_         230 FSRALNRRV  238 (350)
T ss_dssp             HHHHHTSCE
T ss_pred             HHHHHCCcc
Confidence            999999653

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.88  E-value=7e-23  Score=153.09  Aligned_cols=168  Identities=19%  Similarity=0.161  Sum_probs=117.6

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      ||||||+|++|+++|+++|+  +|++++|++....               +.+   ..+..|..++...+. ..+|+|||
T Consensus         8 tGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------------~~~---~~~~~d~~~~~~~~~-~~~d~vi~   68 (212)
T d2a35a1           8 AGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------------PRL---DNPVGPLAELLPQLD-GSIDTAFC   68 (212)
T ss_dssp             ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------------TTE---ECCBSCHHHHGGGCC-SCCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------------ccc---cccccchhhhhhccc-cchheeee
Confidence            79999999999999999997  6777777654311               222   334445555544443 27899999


Q ss_pred             cCCCC--------------hhhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHhh
Q 025702           79 INGRE--------------ADEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLES  141 (249)
Q Consensus        79 ~~~~~--------------~~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~~  141 (249)
                      +++..              ...+.+++++++  ++++||++||.++++.             +.++| .+|..+|+++++
T Consensus        69 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~  135 (212)
T d2a35a1          69 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE  135 (212)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT
T ss_pred             eeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc-------------cccchhHHHHHHhhhccc
Confidence            98763              234677888887  7899999999887532             33456 899999999988


Q ss_pred             cCC-cEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          142 KGV-NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       142 ~~~-~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      .++ +++|+||+.+||+.........+      ...+.....  ..+++||++|+|++++.+++++..
T Consensus       136 ~~~~~~~I~Rp~~v~G~~~~~~~~~~~------~~~~~~~~~--~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         136 QGWPQLTIARPSLLFGPREEFRLAEIL------AAPIARILP--GKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             SCCSEEEEEECCSEESTTSCEEGGGGT------TCCCC------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             cccccceeeCCcceeCCcccccHHHHH------HHHHhhccC--CCCcEEEHHHHHHHHHHHHcCCCC
Confidence            777 59999999999997533221110      111111111  224679999999999999988763

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.67  E-value=3.9e-16  Score=117.50  Aligned_cols=182  Identities=19%  Similarity=0.282  Sum_probs=126.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+...                ..++..+.+|++|+++++++++..     ++|+
T Consensus        13 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1          13 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGA----------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSSCC----------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCcch----------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999999998765                246778899999999888777642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||....                    +    ++.++..+.  +..++|++||...+..           ......|
T Consensus        77 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y  145 (237)
T d1uzma1          77 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-----------IGNQANY  145 (237)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHH
T ss_pred             EEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccC-----------CcccHHH
Confidence            9999986321                    1    233444444  5569999999765311           1223346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..++++..+.||.+..+.. ..+.........+..++         .-+..++|+|+++++
T Consensus       146 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~-~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~f  215 (237)
T d1uzma1         146 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT-RALDERIQQGALQFIPA---------KRVGTPAEVAGVVSF  215 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-HHSCHHHHHHHGGGCTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhh-hccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHH
Confidence             99988776643       4689999999999876521 00111122222232222         124568999999999


Q ss_pred             HhcCC--CCCCceEEecCCc
Q 025702          202 VLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++...  .-.|+.+.+.+|-
T Consensus       216 L~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         216 LASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HhCchhcCCcCCeEEECCCC
Confidence            99653  3468899998874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.66  E-value=2.7e-16  Score=119.55  Aligned_cols=193  Identities=17%  Similarity=0.214  Sum_probs=132.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|.++|++|++.+|+.....+.     ..++.....++..+.+|++|++++.++++..     ++|+
T Consensus        16 TGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~-----~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   90 (251)
T d2c07a1          16 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSV-----VDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI   90 (251)
T ss_dssp             ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHH-----HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence            79999999999999999999999999976552111     1122233457899999999999888887642     8999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+++....                    +    ++.++..+.  +..++|++||...+..           ......|
T Consensus        91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~-----------~~~~~~Y  159 (251)
T d2c07a1          91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-----------NVGQANY  159 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------CTTCHHH
T ss_pred             eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC-----------CCCCHHH
Confidence            9999886311                    1    233444443  5679999999776421           1122346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..++++..+.||.+-.+... .........+.+..++.         -+..++|+|+++++
T Consensus       160 ~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~-~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~f  229 (251)
T d2c07a1         160 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD-KISEQIKKNIISNIPAG---------RMGTPEEVANLACF  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTS---------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc-ccCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHH
Confidence             89988877653       46899999999999877421 12233444444444332         24568999999999


Q ss_pred             HhcCC--CCCCceEEecCCc
Q 025702          202 VLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++...  .-.|+.+.+.+|-
T Consensus       230 L~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         230 LSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCchhCCCcCcEEEECCCc
Confidence            99653  3368899988874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=3.4e-16  Score=119.19  Aligned_cols=195  Identities=13%  Similarity=0.125  Sum_probs=133.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+..+..+.     ..++.....++.++.+|++|+++++++++..     ++|+
T Consensus        17 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~-----~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi   91 (255)
T d1fmca_          17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHV-----VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999986552211     1223333567899999999999888877542     7999


Q ss_pred             EEecCCCChh-------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREAD-------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~~-------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||++|....                   +    ++.++..+.  +..++|++||...+..           ......| 
T Consensus        92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~-----------~~~~~~Y~  160 (255)
T d1fmca_          92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NINMTSYA  160 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTCHHHH
T ss_pred             eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc-----------ccccccch
Confidence            9999986321                   1    222333333  5568999998765311           1223346 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHH
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQV  202 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~  202 (249)
                      .+|...+.+.+       +.++++..+.||.+-.+.......+.......+..++.         -+..++|+|++++++
T Consensus       161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~---------R~g~pedvA~~v~fL  231 (255)
T d1fmca_         161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR---------RLGQPQDIANAALFL  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC---------SCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHH
Confidence            88988776643       46899999999998765311111223344444444432         245589999999999


Q ss_pred             hcCC--CCCCceEEecCCcc
Q 025702          203 LGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       203 ~~~~--~~~~~~~~i~~~~~  220 (249)
                      +...  ...|+.+.+.+|..
T Consensus       232 ~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         232 CSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTSC
T ss_pred             hCchhcCCcCCEEEECcCcc
Confidence            8653  34789999998864

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.65  E-value=1.5e-15  Score=115.15  Aligned_cols=193  Identities=16%  Similarity=0.185  Sum_probs=125.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|.++|++|++.+|++.+..       +........++..+.+|++|+++++++++.     -++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~-------~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1          11 TGGANGIGRAIAERFAVEGADIAIADLVPAPEA-------EAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH-------HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH-------HHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999865421       122333456889999999999988887753     27999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||....                        .++.++..++  +..++|++||......           ......|
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----------~~~~~~Y  152 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----------IEAYTHY  152 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------CSSCHHH
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc-----------Ccccccc
Confidence            9999987321                        1333444444  5679999999776311           1122346


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.       ...++++..+.||.+..+...............+..        ....-+..++|+|+++++
T Consensus       153 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~--------~~l~r~~~pedvA~~v~f  224 (247)
T d2ew8a1         153 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--------QAIPRLQVPLDLTGAAAF  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--------SSSCSCCCTHHHHHHHHH
T ss_pred             hhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHh--------ccCCCCCCHHHHHHHHHH
Confidence             8898877654       246899999999998776422111111111111110        011124568999999999


Q ss_pred             HhcCC--CCCCceEEecCCc
Q 025702          202 VLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++...  -..|+++.+.+|-
T Consensus       225 L~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         225 LASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HTSGGGTTCCSCEEEESSSC
T ss_pred             HhCchhcCCcCCeEEECCCE
Confidence            98653  2468899998875

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.65  E-value=9.4e-16  Score=116.45  Aligned_cols=197  Identities=18%  Similarity=0.192  Sum_probs=133.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+.++..+...    ........++..+.+|++|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~----~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   86 (251)
T d1vl8a_          11 TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQ----KLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT   86 (251)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999998765321110    111223457888999999999888887642     7999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||....                        .++.++..++  +..++|++||.....          .+......|
T Consensus        87 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~----------~~~~~~~~Y  156 (251)
T d1vl8a_          87 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE----------VTMPNISAY  156 (251)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC----------CCSSSCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc----------ccCccccch
Confidence            9999986311                        1344555554  456999999865410          111223346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                       .+|...+.+.+       ..++++..+.||.+-.+...... .+.......+..++.         .+..++|+|++++
T Consensus       157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~  227 (251)
T d1vl8a_         157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG---------RTGVPEDLKGVAV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS---------SCBCGGGGHHHHH
T ss_pred             HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHH
Confidence             88988777653       46899999999999877421111 112333444444332         2345899999999


Q ss_pred             HHhcCC--CCCCceEEecCCcc
Q 025702          201 QVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++...  ...|+++.+.+|..
T Consensus       228 fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         228 FLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCchhCCCcCcEEEeCcCee
Confidence            998653  34789999988754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.65  E-value=1.2e-15  Score=115.15  Aligned_cols=189  Identities=18%  Similarity=0.183  Sum_probs=130.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+.....+...          .-+++.+.+|++|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_          11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            7999999999999999999999999998655321111          235788999999999988887642     7999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||....                        .++.++..+.  +...++++||....+            ......|
T Consensus        81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~------------~~~~~~Y  148 (242)
T d1ulsa_          81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG------------NLGQANY  148 (242)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC------------CTTCHHH
T ss_pred             EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC------------CCCCcch
Confidence            9999986321                        1333444444  455677777644321            1123346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..++++..+.||.+-.+... ...........+..++.         -+..++|+|+++.+
T Consensus       149 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-~~~~~~~~~~~~~~pl~---------R~~~pedia~~v~f  218 (242)
T d1ulsa_         149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-KVPEKVREKAIAATPLG---------RAGKPLEVAYAALF  218 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-SSCHHHHHHHHHTCTTC---------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh-cCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHHH
Confidence             89988776643       46899999999999877532 22233344444444432         23458999999999


Q ss_pred             HhcCC--CCCCceEEecCCccc
Q 025702          202 VLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++...  .-.|+.+.+.+|..+
T Consensus       219 L~S~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         219 LLSDESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTT
T ss_pred             HhchhhCCCCCcEEEECCCccC
Confidence            99653  347899999888643

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=5.6e-16  Score=117.12  Aligned_cols=191  Identities=16%  Similarity=0.169  Sum_probs=131.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+++...+        -..+...+...+.+|++|+++++++++..     ++|+
T Consensus        10 TGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_          10 TGASRGIGRAIAETLAARGAKVIGTATSENGAQA--------ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH--------HHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            7999999999999999999999999998655221        11223457888999999998888777642     7999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+|+....                        .++.++..+.  +..++|++||...+..           ......|
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~-----------~~~~~~Y  150 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG-----------NGGQANY  150 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC-----------CCCCHHH
Confidence            9999986321                        1333444443  5679999999776421           1122346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       ..++++..+.||.+-.+... ...........+..++.         .+..++|+|+++.+
T Consensus       151 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~-~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~f  220 (243)
T d1q7ba_         151 AAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR-ALSDDQRAGILAQVPAG---------RLGGAQEIANAVAF  220 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-TSCHHHHHHHHTTCTTS---------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh-hhhhhHHHHHHhcCCCC---------CCCCHHHHHHHHHH
Confidence             99988877653       46899999999988665311 11122223333333321         24568999999999


Q ss_pred             HhcCC--CCCCceEEecCCcc
Q 025702          202 VLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~  220 (249)
                      ++...  ...|+.+.+.+|-.
T Consensus       221 L~S~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         221 LASDEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             HHSGGGTTCCSCEEEESTTSS
T ss_pred             HhCchhcCCcCCeEEECCCeE
Confidence            99653  24789999988754

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.64  E-value=2e-15  Score=115.26  Aligned_cols=197  Identities=16%  Similarity=0.148  Sum_probs=132.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|.++|++|++.+|+..+..+..    ...+.....++..+.+|++|+++++++++.     -++|+
T Consensus        13 TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~----~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   88 (261)
T d1geea_          13 TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV----LEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999999865422111    122233356788999999999988887764     27999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--C-CCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--N-LEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~-~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||++|....                        .++.++..+.  + ...+|++||.....           +......
T Consensus        89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~-----------~~~~~~~  157 (261)
T d1geea_          89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PWPLFVH  157 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCTTCHH
T ss_pred             eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc-----------cCccccc
Confidence            9999986321                        1333444443  3 34588899876531           1112234


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAF  199 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  199 (249)
                      | .+|...+.+.+       ..++++..+.||.+..+...... .+.......+..++.         -+..++|+|+++
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v  228 (261)
T d1geea_         158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG---------YIGEPEEIAAVA  228 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS---------SCBCHHHHHHHH
T ss_pred             cccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC---------CCCCHHHHHHHH
Confidence            6 89988777653       46899999999999776421111 112223333333331         245589999999


Q ss_pred             HHHhcCC--CCCCceEEecCCccc
Q 025702          200 VQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       200 ~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++++...  ...|+.+.+.+|..+
T Consensus       229 ~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         229 AWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhCchhcCCcCCeEEECCCeeC
Confidence            9999653  347899999998754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.64  E-value=5.5e-16  Score=117.26  Aligned_cols=195  Identities=17%  Similarity=0.190  Sum_probs=131.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+++.....+.+    ..++.....++.++.+|++|+++++++++..     ++|+
T Consensus         7 TGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEV----SKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH----HHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            799999999999999999999998766544322111    1233334568889999999999888877642     7999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+|+....                        .++.++..+.  +..++|++||...+-.           ......|
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~-----------~~~~~~Y  151 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG-----------NIGQANY  151 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------CTTCHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC-----------CCCCHHH
Confidence            9999986321                        1334455543  5679999999776421           1122345


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       +.++++..+.||.+-.+.. ..+.........+..++.         -+..++|+|+++.+
T Consensus       152 ~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl~---------R~~~p~dvA~~v~f  221 (244)
T d1edoa_         152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-AKLGEDMEKKILGTIPLG---------RTGQPENVAGLVEF  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH-HTTCHHHHHHHHTSCTTC---------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH-HHhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHH
Confidence             88988777653       4689999999999876521 111223333444443331         24568999999999


Q ss_pred             HhcCCC---CCCceEEecCCcc
Q 025702          202 VLGNEK---ASRQVFNISGEKY  220 (249)
Q Consensus       202 ~~~~~~---~~~~~~~i~~~~~  220 (249)
                      ++..+.   -.|+.+.+.+|-.
T Consensus       222 La~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         222 LALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHHCSGGGGCCSCEEEESTTTT
T ss_pred             HHCCchhcCCcCCeEEeCCCee
Confidence            864332   3688999988753

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.63  E-value=2.6e-15  Score=113.31  Aligned_cols=187  Identities=15%  Similarity=0.153  Sum_probs=129.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|++.+...        ...+....+.++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_          12 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKA--------MAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            7999999999999999999999999998755221        12223467889999999999888777642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||....                    +    ++.++..+.  +..++|++||...+..           ......|
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----------~~~~~~Y  152 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG-----------TVACHGY  152 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc-----------cccccch
Confidence            9999987321                    1    222333333  5678999999776311           1122346


Q ss_pred             -cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          130 -KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       130 -~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                       .+|...+.+.+       +.++++..+.||.+-.+...         ...+.. .     ......+..++|+|+++++
T Consensus       153 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~---------~~~~~~-~-----~~pl~R~~~p~diA~~v~f  217 (244)
T d1nffa_         153 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD---------WVPEDI-F-----QTALGRAAEPVEVSNLVVY  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT---------TSCTTC-S-----CCSSSSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHh---------hhhHHH-H-----hccccCCCCHHHHHHHHHH
Confidence             88988777653       46899999999998776310         000000 0     0111236779999999999


Q ss_pred             HhcCC--CCCCceEEecCCccc
Q 025702          202 VLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       202 ~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++...  ...|+++.+.+|...
T Consensus       218 L~s~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         218 LASDESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhChhhCCCcCCEEEECCCeec
Confidence            99653  347899999888643

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.63  E-value=1.4e-15  Score=115.46  Aligned_cols=191  Identities=15%  Similarity=0.126  Sum_probs=128.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||++++++|+++|++|++.+|+.+...+        ...+....+.++.+|++|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_          11 TGGARGLGAEAARQAVAAGARVVLADVLDEEGAA--------TARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            7999999999999999999999999998765321        12223567899999999999888887642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+|+....                    +    .+.++..++  +..++|++||...+..           ......|
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~-----------~~~~~~Y  151 (254)
T d1hdca_          83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------LALTSSY  151 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHHH
T ss_pred             EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc-----------ccchhhH
Confidence            9999986321                    1    333444444  5679999999776411           1123346


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEee-eeHHHHHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL-GHVKDLARAFV  200 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D~a~~~~  200 (249)
                       .+|...+.+.       .+.++++..+.||.+..+.         .........-.. .......-+ +.++|+|++++
T Consensus       152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~---------~~~~~~~~~~~~-~~~~pl~R~g~~PedvA~~v~  221 (254)
T d1hdca_         152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM---------TAETGIRQGEGN-YPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHHTCCCSTTS-CTTSTTSSCB-CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc---------chhcCHHHHHHH-HhCCCCCCCCCCHHHHHHHHH
Confidence             8898877664       2468999999999986651         111111111000 000011112 34799999999


Q ss_pred             HHhcCC--CCCCceEEecCCcc
Q 025702          201 QVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++...  ...|+.+.+.+|..
T Consensus       222 fL~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         222 KLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhchhhCCCCCceEEeCCCcc
Confidence            999653  34789999988763

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=1.3e-15  Score=116.22  Aligned_cols=196  Identities=14%  Similarity=0.131  Sum_probs=120.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----C--CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~--~~d   74 (249)
                      |||++-||+++++.|+++|++|++++|++.+..+.     ..++.....++..+.+|++|++++.++++.    .  .+|
T Consensus        14 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~-----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   88 (259)
T d1xq1a_          14 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNEC-----LSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   88 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence            79999999999999999999999999987653211     112222245789999999999888777653    1  489


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||++|....                    +    ++.++..++  +..++|++||...+.           +......
T Consensus        89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-----------~~~~~~~  157 (259)
T d1xq1a_          89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-----------SASVGSI  157 (259)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------CCH
T ss_pred             cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc-----------ccccccc
Confidence            99999986321                    1    233444444  567999999876531           1122344


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.+       ..++++..+.||.+-.|...............+..+         ..-+..++|+|++++
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~p---------l~R~~~pedvA~~v~  228 (259)
T d1xq1a_         158 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKP---------LGRFGEPEEVSSLVA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHH
T ss_pred             ccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCC---------CCCCcCHHHHHHHHH
Confidence            6 89988776642       468999999999987764211111111111111111         123556899999999


Q ss_pred             HHhcCC--CCCCceEEecCCccc
Q 025702          201 QVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      +++...  ...|+.+.+.+|..+
T Consensus       229 fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         229 FLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             HHhCchhcCCcCcEEEeCCCEEC
Confidence            998643  346889999888654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.3e-15  Score=115.19  Aligned_cols=190  Identities=13%  Similarity=0.123  Sum_probs=130.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||++-||+++++.|+++|++|++.+|++.+..+.         ..-.+++..+.+|++|++++++++++. ++|++||+
T Consensus        13 TGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~---------~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_          13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---------VRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHH---------HHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            79999999999999999999999999986553211         111256888999999999999988754 69999999


Q ss_pred             CCCChh------------------------hhHHHHHhC-C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           80 NGREAD------------------------EVEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        80 ~~~~~~------------------------~~~~~~~a~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      ++....                        .++.++..+ +  +..++|++||...+..           ......| .+
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----------~~~~~~Y~as  152 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------VTNHSVYCST  152 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CTTBHHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc-----------ccchhhhhhh
Confidence            987321                        123344432 2  4578999998776311           1122345 88


Q ss_pred             hHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       132 k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      |...+.+.+       ..++++..+.||.+..+.... ..-........+..++         ..+..++|+|+++++++
T Consensus       153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peevA~~v~fL~  223 (244)
T d1pr9a_         153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL---------GKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence            988776653       468999999999987763100 0011222333333332         12556899999999998


Q ss_pred             cCC--CCCCceEEecCCc
Q 025702          204 GNE--KASRQVFNISGEK  219 (249)
Q Consensus       204 ~~~--~~~~~~~~i~~~~  219 (249)
                      ...  -..|+.+.+.+|-
T Consensus       224 S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         224 SDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             SGGGTTCCSCEEEESTTG
T ss_pred             CchhCCcCCcEEEECccH
Confidence            653  3478899988875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.62  E-value=1.3e-15  Score=115.38  Aligned_cols=191  Identities=14%  Similarity=0.108  Sum_probs=127.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+++...          ..+ ..+..++.+|++|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~----------~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1          11 TGGARGIGRAIAQAFAREGALVALCDLRPEGKE----------VAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH----------HHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH----------HHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence            799999999999999999999999999865421          011 125677899999998888777642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||....                    +    ++.++..++  +..++|++||...+..           ......|
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~-----------~~~~~~Y  148 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-----------EQENAAY  148 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-----------CTTBHHH
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccc-----------ccccchh
Confidence            9999986321                    1    333444443  4579999999776421           1223346


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCc-----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                       .+|...+.+.       ...++++..+.||.+-.|....     ...........+..++         ..+..++|+|
T Consensus       149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedia  219 (248)
T d2d1ya1         149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL---------RRLGKPEEVA  219 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT---------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence             8898877664       2468999999999986652100     0000111111122111         2355689999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      +++.+++...  ...|+.+.+.+|-..|
T Consensus       220 ~~v~fL~S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         220 EAVLFLASEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence            9999998653  3478999999987655

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.61  E-value=3.2e-15  Score=113.91  Aligned_cols=193  Identities=17%  Similarity=0.179  Sum_probs=131.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+.+....        ...+...++..+.+|++|+++++++++.     -++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~--------~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_          11 TGSARGIGRAFAEAYVREGARVAIADINLEAARA--------TAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHH--------HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            7999999999999999999999999998654221        1223356888999999999998888764     27999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHh-CC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------E----VEPILDA-LP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a-~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||++|....                    +    ++.++.. ++  +..++|++||...+-           +......
T Consensus        83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~~~~~~~  151 (256)
T d1k2wa_          83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR-----------GEALVGV  151 (256)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTTCHH
T ss_pred             EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc-----------ccccccc
Confidence            9999986321                    1    2223332 22  356899999977631           1122334


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHH-----------HHHHHHcCCCeeecCCCcceEee
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEW-----------FFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      | .+|...+.+.       ...++++..+.||.+-.+.. ......           ....+.+..++         .-+
T Consensus       152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~  221 (256)
T d1k2wa_         152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW-DGVDAKFADYENLPRGEKKRQVGAAVPF---------GRM  221 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH-HHHHHHHHHHHTCCTTHHHHHHHHHSTT---------SSC
T ss_pred             hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh-hhhhhhhhhhccCChHHHHHHHHhcCCC---------CCC
Confidence            6 8898877665       34689999999999877731 111111           11111111111         124


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      ..++|+|+++++++...  --.|+.+.+.+|..+|
T Consensus       222 ~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         222 GRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             BCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            56899999999988653  3368999999987664

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.61  E-value=4.3e-15  Score=113.30  Aligned_cols=196  Identities=15%  Similarity=0.116  Sum_probs=131.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----C--CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K--GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~--~~d   74 (249)
                      |||++-||+++++.|+++|++|++.+|++....+.     ..++......+.++.+|++|+++++++++.    .  ++|
T Consensus        14 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~-----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id   88 (259)
T d2ae2a_          14 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDC-----LTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   88 (259)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence            79999999999999999999999999986553211     122233346788899999999888877643    2  589


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||++|....                    +    ++.++..++  +..++|++||.....           +......
T Consensus        89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------~~~~~~~  157 (259)
T d2ae2a_          89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-----------AVPYEAV  157 (259)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-----------CCTTCHH
T ss_pred             EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc-----------ccccccc
Confidence            99999986311                    1    223333333  456999999976531           1112334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCC----CcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      | .+|...+.+.+       ..++++..+.||.+-.+..    .............+..++.         -+..++|+|
T Consensus       158 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~pedvA  228 (259)
T d2ae2a_         158 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR---------RMGEPKELA  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC---------SCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            6 89988777653       4689999999999876531    1111122333444444332         244589999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCccc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      +++++++...  --.|+.+.+.+|-..
T Consensus       229 ~~v~fL~S~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         229 AMVAFLCFPAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhCCCcCcEEEECCCeEe
Confidence            9999999753  236889999887543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=1e-15  Score=115.61  Aligned_cols=191  Identities=15%  Similarity=0.158  Sum_probs=129.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-CCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-GFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-~~d~Vi~~   79 (249)
                      |||++-||+++++.|.++|++|++.+|+..+..+         ..+-..++..+.+|++|++++++++++. ++|++||+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~---------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_          11 TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS---------LAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            7999999999999999999999999998655221         1111357889999999999999998865 68999999


Q ss_pred             CCCChh--------------------h----hHHHHHhC-C--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           80 NGREAD--------------------E----VEPILDAL-P--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        80 ~~~~~~--------------------~----~~~~~~a~-~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      ||....                    +    ++.++..+ .  +..++|++||...+..           ......| .+
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------~~~~~~Y~as  150 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----------FPNLITYSST  150 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CTTBHHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc-----------CCccccccch
Confidence            986321                    1    22233332 2  3468999998765321           1122345 88


Q ss_pred             hHHHHHHHh-------hcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          132 KLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       132 k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      |...+.+.+       ..++++..+.||.+..+.... ...+.......+..++.         -+..++|+|+++++++
T Consensus       151 Kaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peeva~~v~fL~  221 (242)
T d1cyda_         151 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLR---------KFAEVEDVVNSILFLL  221 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTS---------SCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHh
Confidence            988877653       468999999999987652100 00012233333333321         2456899999999998


Q ss_pred             cCC--CCCCceEEecCCcc
Q 025702          204 GNE--KASRQVFNISGEKY  220 (249)
Q Consensus       204 ~~~--~~~~~~~~i~~~~~  220 (249)
                      ...  ...|+.+.+.+|-.
T Consensus       222 S~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         222 SDRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             SGGGTTCCSSEEEESTTGG
T ss_pred             CchhcCcCCceEEeCcchh
Confidence            653  34788999988753

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.4e-15  Score=113.14  Aligned_cols=192  Identities=18%  Similarity=0.177  Sum_probs=129.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+.+....         ..+-.+++.++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~---------~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1          12 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA---------LEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------HHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999998654221         1111357889999999999988887642     7999


Q ss_pred             EEecCCCChh---------------------h----hHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD---------------------E----VEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~----~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+||....                     +    ++.++..++ +..++|++||...+..           ......|
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~-----------~~~~~~Y  151 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG-----------QAQAVPY  151 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC-----------CTTCHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc-----------ccCcchh
Confidence            9999985210                     1    233344444 3469999999776421           1122345


Q ss_pred             -cchHHHHHHH-------hhcCCcEEEeecceeeCCCC-----CcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          130 -KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLN-----YNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       130 -~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                       .+|...+.+.       ...++++..+.||.+-.|..     ...-....+.......++.         -+..++|+|
T Consensus       152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~p~eva  222 (250)
T d1ydea1         152 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG---------RMGQPAEVG  222 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS---------SCBCHHHHH
T ss_pred             HHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC---------CCCCHHHHH
Confidence             8898877664       35689999999999866520     0000111222222333321         245689999


Q ss_pred             HHHHHHhcC-CCCCCceEEecCCccc
Q 025702          197 RAFVQVLGN-EKASRQVFNISGEKYV  221 (249)
Q Consensus       197 ~~~~~~~~~-~~~~~~~~~i~~~~~~  221 (249)
                      +++++++.. .-..|+.+.+.+|..+
T Consensus       223 ~~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         223 AAAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             HHHHHHhCccCCCcCCeEEECCCccc
Confidence            999998853 2237889999888654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.59  E-value=5.3e-15  Score=112.29  Aligned_cols=193  Identities=19%  Similarity=0.195  Sum_probs=125.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+++......     ..+ ....++.++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   85 (251)
T d1zk4a1          12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA-----KSV-GTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHh-CCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            799999999999999999999999999865421110     011 11357899999999999888877642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CC-CeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+|+....                    +    ++.++..+.  +. .++|++||...+-.           ......
T Consensus        86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~-----------~~~~~~  154 (251)
T d1zk4a1          86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-----------DPSLGA  154 (251)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc-----------CCCchh
Confidence            9999987321                    1    333444444  33 47899998765311           112234


Q ss_pred             c-cchHHHHHHH---------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~---------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.         .+.++++..+.||.+..+..................+         ..-+..++|+|++
T Consensus       155 Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~p---------l~R~~~pedvA~~  225 (251)
T d1zk4a1         155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTP---------MGHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCT---------TSSCBCHHHHHHH
T ss_pred             HHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCC---------CCCCcCHHHHHHH
Confidence            5 8887665432         2457999999999987652100000111111111111         1135678999999


Q ss_pred             HHHHhcCCC--CCCceEEecCCc
Q 025702          199 FVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      +++++....  ..|+.+.+.+|-
T Consensus       226 v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         226 CVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhCCCcCcEEEECccc
Confidence            999986532  368899998875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.58  E-value=1.1e-14  Score=110.90  Aligned_cols=191  Identities=17%  Similarity=0.203  Sum_probs=129.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+++...+     ...++.+...++..+.+|++|++++.++++..     ++|+
T Consensus         7 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~-----~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           7 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKA-----VASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----HHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             cCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHH-----HHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            7999999999999999999999999998755321     11223333567889999999999888877642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC---CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+||....                    +    ++.++..+.   +..++|++||...+.           +......
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------~~~~~~~  150 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------GNPELAV  150 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CCTTBHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc-----------cCccccc
Confidence            9999986321                    1    223333322   346799999877531           1122334


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHH---------------HHHcCCCeeecCCCcc
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFH---------------RLKAGRPIPIPGSGIQ  185 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~  185 (249)
                      | .+|...+.+.       ...++++..+.||.+-.|.     ...+..               ...+..++        
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~pl--------  217 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITL--------  217 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTT--------
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH-----HhhhhhhhHhhhcccchhHHHHHHhcCCC--------
Confidence            6 8898877664       3468999999999886652     222111               11122221        


Q ss_pred             eEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                       .-+..++|+|+++++++...  ...|+.+.+.+|-.+
T Consensus       218 -~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         218 -GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEEe
Confidence             12566899999999999653  346889999888643

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.58  E-value=1.5e-15  Score=116.01  Aligned_cols=203  Identities=15%  Similarity=0.169  Sum_probs=127.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhh-hhccCceEEEEeccCCHHHHHHhhhhC-----CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSAK-----GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d   74 (249)
                      |||++-||+++++.|+++|++|++..|+.....+...    ..+ .....++.++.+|++|+++++++++..     ++|
T Consensus        10 TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   85 (260)
T d1x1ta1          10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR----AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH----HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            7999999999999999999999999998643211110    111 122457889999999999988888642     799


Q ss_pred             EEEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||....                        .++.++..++  +..++|++||...+..           ......
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----------~~~~~~  154 (260)
T d1x1ta1          86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-----------SANKSA  154 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec-----------cCCcch
Confidence            99999986321                        1333444444  5679999999776321           112234


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHH--cCCCe-eecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLK--AGRPI-PIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|...+.+.+       ..++++..+.||.+-.+..... .........  ..... ..........-+..++|+|+
T Consensus       155 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~  233 (260)
T d1x1ta1         155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGG  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHHH
T ss_pred             hhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhh-hhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            6 88988776653       4679999999999877632111 000000000  00000 00000001123567999999


Q ss_pred             HHHHHhcCC--CCCCceEEecCCc
Q 025702          198 AFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ++++++...  ...|+.+.+.+|-
T Consensus       234 ~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         234 TAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhChhhCCCcCCEEEECcch
Confidence            999999653  3478899998874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.58  E-value=5.6e-15  Score=112.76  Aligned_cols=193  Identities=12%  Similarity=0.199  Sum_probs=129.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|.++|++|++++|++....+.     ...+.+...++..+.+|++|+++++++++..     ++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~-----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   85 (260)
T d1zema1          11 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKA-----EASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   85 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence            79999999999999999999999999986552211     1222333467889999999999888887642     7999


Q ss_pred             EEecCCCChh---------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~---------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||++|....                     +    ++.++..+.  +..++|++||...+..           ......
T Consensus        86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~-----------~~~~~~  154 (260)
T d1zema1          86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-----------PPNMAA  154 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-----------CTTBHH
T ss_pred             ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC-----------CcchHH
Confidence            9999885311                     1    233344333  5679999999776421           112234


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCC---------------cchHHHHHHHHHcCCCeeecCCCcc
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---------------NPVEEWFFHRLKAGRPIPIPGSGIQ  185 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~  185 (249)
                      | .+|...+.+.+       ..++++..+.||.+-.+...               ......+...+.+..++.       
T Consensus       155 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~-------  227 (260)
T d1zema1         155 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR-------  227 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS-------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC-------
Confidence            6 88988776653       46899999999998766210               011112222222332221       


Q ss_pred             eEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCC
Q 025702          186 VTQLGHVKDLARAFVQVLGNE--KASRQVFNISGE  218 (249)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~  218 (249)
                        -+..++|+|+++++++...  ...|+.+.+.+|
T Consensus       228 --R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         228 --RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             --SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             --CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence              2456899999999999753  336888888765

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.58  E-value=1.1e-14  Score=110.98  Aligned_cols=195  Identities=13%  Similarity=0.097  Sum_probs=129.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh----hC--CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AK--GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~----~~--~~d   74 (249)
                      |||++-||+++++.|+++|++|++.+|++.+..+.     .+++......+.++.+|+++.++++++++    ..  ..|
T Consensus        12 TGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~-----~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id   86 (258)
T d1ae1a_          12 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC-----LEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN   86 (258)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence            79999999999999999999999999987552211     12333335678888999999998877664    22  489


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +++|+++....                    .    ++.++..+.  +..++|++||......           ......
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~-----------~~~~~~  155 (258)
T d1ae1a_          87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA-----------LPSVSL  155 (258)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC-----------CTTCHH
T ss_pred             EEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc-----------cccchh
Confidence            99999886321                    1    222333333  6779999999876321           112334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-----hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      | .+|...+.+.+       ..++++..+.||.+..+.....     ..........+..++.         -+...+|+
T Consensus       156 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg---------R~~~pedi  226 (258)
T d1ae1a_         156 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG---------RAGKPQEV  226 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTC---------SCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCC---------CCcCHHHH
Confidence            5 88988777653       4689999999999987642111     1122333333333321         25678999


Q ss_pred             HHHHHHHhcC--CCCCCceEEecCCcc
Q 025702          196 ARAFVQVLGN--EKASRQVFNISGEKY  220 (249)
Q Consensus       196 a~~~~~~~~~--~~~~~~~~~i~~~~~  220 (249)
                      |+++++++..  ..-.|+.+.+.+|-.
T Consensus       227 A~~v~fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         227 SALIAFLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhChhhCCCcCcEEEeCCCee
Confidence            9999999964  334788999988754

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.58  E-value=7.9e-15  Score=111.81  Aligned_cols=194  Identities=21%  Similarity=0.252  Sum_probs=129.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+++...+.     ...+.....++..+.+|++|+++++++++..     ++|+
T Consensus         8 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~-----~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (257)
T d2rhca1           8 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTT-----LKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV   82 (257)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            79999999999999999999999999986542211     1223333567899999999999888877642     6999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||+||....                    +    ++.++..+.    +..++|++||...+..           .....
T Consensus        83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~-----------~~~~~  151 (257)
T d2rhca1          83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----------VVHAA  151 (257)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC-----------CTTCH
T ss_pred             EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc-----------cccch
Confidence            9999986321                    1    233343322    4568999988765311           11223


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCC----------cchHHHHHHHHHcCCCeeecCCCcceEee
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----------NPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      .| .+|...+.+.+       ..++++..+.||.+-.+...          ..........+.+..++.         -+
T Consensus       152 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg---------R~  222 (257)
T d2rhca1         152 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG---------RY  222 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS---------SC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC---------CC
Confidence            45 89988777653       35789999999998665210          001122233333333321         24


Q ss_pred             eeHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          190 GHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      ..++|+|+++++++...  ...|+.+.+.+|-
T Consensus       223 ~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         223 VQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence            56899999999999643  3468899988763

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.9e-15  Score=114.00  Aligned_cols=200  Identities=15%  Similarity=0.154  Sum_probs=130.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||++-||+++++.|+++|++|++++|+.++..+..     ..+.+  ...++.++.+|++|+++++++++..     ++
T Consensus         9 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (254)
T d2gdza1           9 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCK-----AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   83 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            799999999999999999999999999876522110     00100  1357889999999999888877532     79


Q ss_pred             cEEEecCCCChh----------------hhHHHHHhCC-----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cc
Q 025702           74 DVVYDINGREAD----------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KG  131 (249)
Q Consensus        74 d~Vi~~~~~~~~----------------~~~~~~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~  131 (249)
                      |++||+|+....                .++.++..+.     ...++|++||...+-           +......| .+
T Consensus        84 DilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~as  152 (254)
T d2gdza1          84 DILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-----------PVAQQPVYCAS  152 (254)
T ss_dssp             CEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCTTCHHHHHH
T ss_pred             CeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc-----------CCCCccchHHH
Confidence            999999997422                1233344433     135799999977631           11223346 88


Q ss_pred             hHHHHHHH---------hhcCCcEEEeecceeeCCCCCcch-------HHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          132 KLNTESVL---------ESKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       132 k~~~e~~~---------~~~~~~~~~~r~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      |...+.+.         ...++++..+.||.+-.+......       .......+.+..+         ...+..++|+
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedv  223 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIK---------YYGILDPPLI  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHH---------HHCCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCC---------CCCCcCHHHH
Confidence            87766543         246789999999988654200000       0000011111111         1124568999


Q ss_pred             HHHHHHHhcCCCCCCceEEecCCccccHHH
Q 025702          196 ARAFVQVLGNEKASRQVFNISGEKYVTFDG  225 (249)
Q Consensus       196 a~~~~~~~~~~~~~~~~~~i~~~~~~s~~~  225 (249)
                      |++++++++++...|+++.|.+|..+.+.|
T Consensus       224 A~~v~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         224 ANGLITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             HHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence            999999998876689999999998776543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.1e-15  Score=117.17  Aligned_cols=199  Identities=11%  Similarity=0.177  Sum_probs=127.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhh-hhccCceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEF-AEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      |||++-||+++++.|+++|++|++.+|+..+..+... .....+ .....++..+.+|++|+++++++++.     -++|
T Consensus        18 TGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~-el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   96 (297)
T d1yxma1          18 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD-ELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKIN   96 (297)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeE
Confidence            7999999999999999999999999998755211000 000000 00135788899999999988887764     2799


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+++....                    +    ++.++..+.  +..++|++|+....            .......
T Consensus        97 iLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~------------~~~~~~~  164 (297)
T d1yxma1          97 FLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA------------GFPLAVH  164 (297)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT------------CCTTCHH
T ss_pred             EEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc------------ccccccc
Confidence            99999986321                    1    333444444  45678877664321            1112334


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCC---cchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY---NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLAR  197 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  197 (249)
                      | .+|...+.+.+       ..++++..+.||.+..+...   ......+.....+..++         .-+..++|+|+
T Consensus       165 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl---------gR~g~pedvA~  235 (297)
T d1yxma1         165 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA---------KRIGVPEEVSS  235 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT---------SSCBCTHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            5 88988877653       46899999999999876421   11111111111111111         12556899999


Q ss_pred             HHHHHhcCC--CCCCceEEecCCccc
Q 025702          198 AFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       198 ~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      ++++++...  -..|+++.+.+|..+
T Consensus       236 ~v~fL~Sd~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         236 VVCFLLSPAASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhCchhcCcCCcEEEeCcChhh
Confidence            999999653  347899999988644

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.56  E-value=9e-15  Score=111.40  Aligned_cols=197  Identities=17%  Similarity=0.224  Sum_probs=130.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhhC-----CC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSAK-----GF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~~-----~~   73 (249)
                      |||++-||+++++.|+++|++|++.+|+.+......     ..+..  ...++..+.+|++|+++++++++..     ++
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-----~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   84 (258)
T d1iy8a_          10 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-----AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   84 (258)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999876521110     11111  1346888899999999988887642     79


Q ss_pred             cEEEecCCCChh---------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD---------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPK  126 (249)
Q Consensus        74 d~Vi~~~~~~~~---------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~  126 (249)
                      |++||+||....                     +    ++.++..++  +..++|++||...+-           +....
T Consensus        85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-----------~~~~~  153 (258)
T d1iy8a_          85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-----------GIGNQ  153 (258)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------BCSSB
T ss_pred             CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc-----------CCCCc
Confidence            999999985210                     1    223333443  567999999977631           11123


Q ss_pred             Ccc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcc-------hHHHHHHHHHcCCCeeecCCCcceEeeee
Q 025702          127 SRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP-------VEEWFFHRLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       127 ~~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                      ..| .+|...+.+.       ...++++..+.||.+..|.....       ..........+..++         .-+..
T Consensus       154 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~  224 (258)
T d1iy8a_         154 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS---------KRYGE  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT---------CSCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC---------CCCcC
Confidence            346 8898777654       34689999999999876521000       011122222333222         12456


Q ss_pred             HHHHHHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          192 VKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      ++|+|+++++++...  ...|+.+.+.+|...+
T Consensus       225 p~dvA~~v~fL~S~~s~~itG~~i~VDGG~saa  257 (258)
T d1iy8a_         225 APEIAAVVAFLLSDDASYVNATVVPIDGGQSAA  257 (258)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             HHHHHHHHHHHhCchhcCCcCceEEcCcchhcc
Confidence            899999999999653  3478899999887543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.56  E-value=3.8e-14  Score=108.11  Aligned_cols=195  Identities=19%  Similarity=0.196  Sum_probs=128.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||.++++.|+++|++|++..|+..+..+..    ...+.....++..+.+|++|+++++++++.     -++|+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~----~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   87 (259)
T d1ja9a_          12 TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV----VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF   87 (259)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHH----HHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            799999999999999999999998877655422111    123333456889999999999888877753     27999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCCCCCeEEEeeccc-cccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREAD------------------------EVEPILDALPNLEQFIYCSSAG-VYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~~~~~~i~~Ss~~-v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||++|....                        ..+.++..+++..+.+.++|.. .+.           +......| 
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~-----------~~~~~~~Y~  156 (259)
T d1ja9a_          88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT-----------GIPNHALYA  156 (259)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC-----------SCCSCHHHH
T ss_pred             EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc-----------CCCCchhHH
Confidence            9999987321                        1333444555334666665533 221           11122345 


Q ss_pred             cchHHHHHHHh-------hcCCcEEEeecceeeCCC------------CCcchHHHHHHHHHcCCCeeecCCCcceEeee
Q 025702          130 KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL------------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLG  190 (249)
Q Consensus       130 ~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (249)
                      .+|...+.+.+       ..++++..+.||++-.+.            ........+...+.+..++.         -+.
T Consensus       157 asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g  227 (259)
T d1ja9a_         157 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK---------RIG  227 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS---------SCB
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC---------CCc
Confidence            88988777653       468999999999986531            01111223333444444332         245


Q ss_pred             eHHHHHHHHHHHhcCCC--CCCceEEecCCc
Q 025702          191 HVKDLARAFVQVLGNEK--ASRQVFNISGEK  219 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~  219 (249)
                      .++|+|++++++++...  -.|+.+.+.+|.
T Consensus       228 ~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         228 YPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            68999999999997643  378899988874

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.56  E-value=1.8e-14  Score=108.29  Aligned_cols=183  Identities=15%  Similarity=0.195  Sum_probs=122.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |||++-||+++++.|+++|++|++.+|+++...              ..+.+++.+|+++ .+.+.+.+.  ++|++||+
T Consensus        10 TGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~--------------~~~~~~~~~Dv~~~~~~~~~~~g--~iD~lVnn   73 (234)
T d1o5ia_          10 LAASRGIGRAVADVLSQEGAEVTICARNEELLK--------------RSGHRYVVCDLRKDLDLLFEKVK--EVDILVLN   73 (234)
T ss_dssp             ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--------------HTCSEEEECCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--------------hcCCcEEEcchHHHHHHHHHHhC--CCcEEEec
Confidence            799999999999999999999999999864421              1345678899976 344444444  79999999


Q ss_pred             CCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           80 NGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        80 ~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      ||....                        .++.++..++  +..++|++||.....           +......| .+|
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~-----------~~~~~~~Y~asK  142 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------PIENLYTSNSAR  142 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTBHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc-----------cccccccchhHH
Confidence            986311                        1333444444  557899999876531           11222235 888


Q ss_pred             HHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          133 LNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       133 ~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                      ...+.+.       ...++++..+.||.+-.+...............+..++.         .+..++|+|+++++++..
T Consensus       143 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v~fL~S~  213 (234)
T d1o5ia_         143 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMR---------RMAKPEEIASVVAFLCSE  213 (234)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTS---------SCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCh
Confidence            8877654       246899999999998776421111112223333333321         245689999999999865


Q ss_pred             C--CCCCceEEecCCc
Q 025702          206 E--KASRQVFNISGEK  219 (249)
Q Consensus       206 ~--~~~~~~~~i~~~~  219 (249)
                      .  -..|+++.+.+|-
T Consensus       214 ~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         214 KASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             hhcCCcCcEEEECccc
Confidence            3  2368899998875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.56  E-value=8e-15  Score=110.61  Aligned_cols=190  Identities=18%  Similarity=0.259  Sum_probs=129.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++.||.++++.|.++|++|++..|+..+..+        ...+...++.++++|++++++++++++..     ++|+
T Consensus        11 tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1          11 TGAASGIGRAALDLFAREGASLVAVDREERLLAE--------AVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            7999999999999999999999999998765321        22233567889999999999998877642     7999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREAD--------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      +||+++....                    .    .+.++..+++.+.++.+||....            .......| .
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~------------~~~~~~~Y~~  150 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL------------GAFGLAHYAA  150 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC------------CHHHHHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc------------cccCccccch
Confidence            9999875321                    1    22233334444455555554321            11112335 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHh
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVL  203 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  203 (249)
                      +|...|.+.+       ..++++..+.||.+-.+.. ............+..++.         -+..++|+|+++.+++
T Consensus       151 sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~-~~~~~~~~~~~~~~~p~~---------r~~~p~dva~~v~fL~  220 (241)
T d2a4ka1         151 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT-AGLPPWAWEQEVGASPLG---------RAGRPEEVAQAALFLL  220 (241)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG-TTSCHHHHHHHHHTSTTC---------SCBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH-HhhhHhHHHHHHhCCCCC---------CCcCHHHHHHHHHHHh
Confidence            8988887653       4579999999999866532 122333444444444332         2456899999999999


Q ss_pred             cCC--CCCCceEEecCCcc
Q 025702          204 GNE--KASRQVFNISGEKY  220 (249)
Q Consensus       204 ~~~--~~~~~~~~i~~~~~  220 (249)
                      ...  .-.|+.+.+.+|..
T Consensus       221 S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         221 SEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             cchhCCCcCceEEeCCCcc
Confidence            753  34788999988864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.55  E-value=2.7e-14  Score=109.19  Aligned_cols=196  Identities=14%  Similarity=0.148  Sum_probs=124.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh---ccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||++-||++++++|+++|++|++.+|+.....+..     .++..   ...++.++.+|++|+++++++++..     +
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   85 (264)
T d1spxa_          11 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-----QQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   85 (264)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999865522110     11111   1346899999999999888887642     7


Q ss_pred             CcEEEecCCCCh-------------h-----------h----hHHHHHhCC-CCCeEEEeecccc-ccCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREA-------------D-----------E----VEPILDALP-NLEQFIYCSSAGV-YLKSDLLPHCETDT  122 (249)
Q Consensus        73 ~d~Vi~~~~~~~-------------~-----------~----~~~~~~a~~-~~~~~i~~Ss~~v-~~~~~~~~~~e~~~  122 (249)
                      +|++||++|...             +           +    ++.++..++ +..++|.++|... +           .+
T Consensus        86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~-----------~~  154 (264)
T d1spxa_          86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL-----------HA  154 (264)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS-----------SC
T ss_pred             CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc-----------cc
Confidence            999999988521             0           1    223333444 3346666665432 1           11


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch--------HHHHHHHHHcCCCeeecCCCcce
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV--------EEWFFHRLKAGRPIPIPGSGIQV  186 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  186 (249)
                      ......| .+|...+.+.+       ..+++++.+.||.+-.+......        .........+..++.        
T Consensus       155 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--------  226 (264)
T d1spxa_         155 TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG--------  226 (264)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS--------
T ss_pred             CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC--------
Confidence            1123346 88988776642       46899999999999776421110        111122222222221        


Q ss_pred             EeeeeHHHHHHHHHHHhcCC---CCCCceEEecCCccc
Q 025702          187 TQLGHVKDLARAFVQVLGNE---KASRQVFNISGEKYV  221 (249)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~  221 (249)
                       -+..++|+|++++++++.+   -..|+.+.+.+|..+
T Consensus       227 -R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         227 -VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             -SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             -CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence             2455899999999998643   247899999888653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.55  E-value=1.2e-14  Score=110.33  Aligned_cols=190  Identities=16%  Similarity=0.172  Sum_probs=127.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC-----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK-----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~-----~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|++....+        ...+...+..++.+|++|+++++++++..     ++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~--------~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_          12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ--------LAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH--------HHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            7999999999999999999999999997654211        11223467888999999998888777642     7999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREAD------------------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      +||++|....                        .++.++..++ +..++|++||...+-           +......| 
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~-----------~~~~~~~Y~  152 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL-----------PIEQYAGYS  152 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------CCTTBHHHH
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc-----------Ccccccccc
Confidence            9999986321                        1334455555 457999999977631           11222346 


Q ss_pred             cchHHHHHHHh-------h--cCCcEEEeecceeeCCCCCcchHHHHH-----HHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          130 KGKLNTESVLE-------S--KGVNWTSLRPVYIYGPLNYNPVEEWFF-----HRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       130 ~~k~~~e~~~~-------~--~~~~~~~~r~~~v~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      .+|...+.+.+       .  .++++..+.||.+..+.     .....     ........     .....-.+..++|+
T Consensus       153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~-----~~~~~gr~~~pedv  222 (253)
T d1hxha_         153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM-----MQASLPKGVSKEMVLHDP-----KLNRAGRAYMPERI  222 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH-----HHHHSCTTCCHHHHBCBT-----TTBTTCCEECHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh-----HHhhCcchhhHHHHHhCc-----cccccCCCCCHHHH
Confidence            88987766542       2  35899999999987652     11000     01111110     00111236678999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCc
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      |+++++++...  --.|+.+++.+|-
T Consensus       223 A~~v~fL~S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         223 AQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHhChhhCCCcCcEEEECccH
Confidence            99999998653  3478899998863

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=3.9e-14  Score=107.04  Aligned_cols=191  Identities=13%  Similarity=0.105  Sum_probs=128.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-CCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-KGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-~~~d~Vi~~   79 (249)
                      |||++-||+++++.|+++|++|++.+|++.+..+...          ..++....+|+.+.+.++...+. .++|++||+
T Consensus        12 TGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~   81 (245)
T d2ag5a1          12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (245)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------STTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------ccCCceeeeeccccccccccccccccceeEEec
Confidence            7999999999999999999999999998755322111          35788888999887776665553 379999999


Q ss_pred             CCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           80 NGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        80 ~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      +|....                    +    .+.++..+.  +..++|++||....          ..+......| .+|
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVNRCVYSTTK  151 (245)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTTBHHHHHHH
T ss_pred             ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccchhHHHHHH
Confidence            987321                    1    222333333  56799999975431          1122233345 889


Q ss_pred             HHHHHHHh-------hcCCcEEEeecceeeCCCCCc-----chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          133 LNTESVLE-------SKGVNWTSLRPVYIYGPLNYN-----PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       133 ~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      ...+.+.+       ..++++..+.||.+-.|....     .........+.+..++         .-+..++|+|+++.
T Consensus       152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedva~~v~  222 (245)
T d2ag5a1         152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAEEIAMLCV  222 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHH
Confidence            88887653       468999999999998763110     0111222333333332         12556899999999


Q ss_pred             HHhcCC--CCCCceEEecCCcc
Q 025702          201 QVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++...  ...|+.+.|.+|..
T Consensus       223 fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         223 YLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHhChhhCCCcCceEEeCCCcC
Confidence            999753  34789999998865

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.55  E-value=6.9e-14  Score=107.15  Aligned_cols=199  Identities=15%  Similarity=0.131  Sum_probs=131.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|+++|++|++++|+.....+..     .++ .....+.++.+|++|+++++++++.     -++|+
T Consensus        12 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-----~~l-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   85 (268)
T d2bgka1          12 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-----NNI-GSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   85 (268)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHh-cCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence            799999999999999999999999999865521110     011 1134678899999999988888763     27999


Q ss_pred             EEecCCCChh--------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD--------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKS  127 (249)
Q Consensus        76 Vi~~~~~~~~--------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~  127 (249)
                      +||++|....                          .++.++..+.  +..++|++||...+-.          ......
T Consensus        86 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~----------~~~~~~  155 (268)
T d2bgka1          86 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA----------GEGVSH  155 (268)
T ss_dssp             EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC----------CTTSCH
T ss_pred             eccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc----------cccccc
Confidence            9999885210                          1333444543  5668999998765311          111122


Q ss_pred             cc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc---chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          128 RH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN---PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       128 ~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      .| .+|...+.+.+       ..++++..+.||.+-.+....   .-..............        ...+..++|+|
T Consensus       156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--------~gr~~~pedvA  227 (268)
T d2bgka1         156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL--------KGTLLRAEDVA  227 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS--------CSCCCCHHHHH
T ss_pred             ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcccc--------CCCCcCHHHHH
Confidence            46 88988776653       468999999999998875321   1111111112221110        01245689999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCccccH
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYVTF  223 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~s~  223 (249)
                      +++++++...  .-.|+++.+.+|-..+.
T Consensus       228 ~~v~fL~S~~s~~itGq~i~VDGG~t~~~  256 (268)
T d2bgka1         228 DAVAYLAGDESKYVSGLNLVIDGGYTRTN  256 (268)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHhChhhCCccCceEEECcCcccCC
Confidence            9999999653  34789999999875543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=4.6e-14  Score=107.54  Aligned_cols=195  Identities=13%  Similarity=0.099  Sum_probs=124.9

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|  -||++++++|+++|++|++..|+......      ............++.+|++|+++++++++.     -++
T Consensus        14 TGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (256)
T d1ulua_          14 MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE------AEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (256)
T ss_dssp             ESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH------HHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             ECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH------HHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence            68887  59999999999999999888887433111      011222234677899999999888887753     269


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHh----CCCCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDA----LPNLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a----~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||+++....                        ....+..+    +++..++|++||......           ...
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~-----------~~~  156 (256)
T d1ulua_          88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----------VPK  156 (256)
T ss_dssp             EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----------CTT
T ss_pred             eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC-----------CCC
Confidence            999999986311                        11222222    223468999998776311           122


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..++++..+.||.+..+..... ..........+..++.         -+..++|+|
T Consensus       157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA  227 (256)
T d1ulua_         157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR---------RNITQEEVG  227 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS---------SCCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            3346 88988777653       4689999999999877642211 1123333444433332         244589999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCccc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      +++++++...  ...|+.+.+.+|..+
T Consensus       228 ~~v~fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         228 NLGLFLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhCCccCCeEEECcCEeC
Confidence            9999999753  247889999888654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.53  E-value=2.2e-14  Score=109.48  Aligned_cols=202  Identities=14%  Similarity=0.195  Sum_probs=130.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|+++|++|++++|+..+..+..    +....+.+.++..+.+|++|+++++++++.     -++|+
T Consensus        15 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~----~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          15 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT----EKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH----HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            799999999999999999999999999877632211    011122356789999999999988887753     27999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC---CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++....                    +    ++.++..+.   ...+++..|+...+......    .........
T Consensus        91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~----~~~~~~~~~  166 (260)
T d1h5qa_          91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----LNGSLTQVF  166 (260)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----TTEECSCHH
T ss_pred             ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc----cccCccccc
Confidence            9999986311                    1    233344432   34456666655543211000    000112234


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.       ...++++..+.||.+-.+.. ............+..++.         -+..++|+|++++
T Consensus       167 Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl~---------R~g~pedvA~~v~  236 (260)
T d1h5qa_         167 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT-AHMDKKIRDHQASNIPLN---------RFAQPEEMTGQAI  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG-GGSCHHHHHHHHHTCTTS---------SCBCGGGGHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcch-hccCHHHHHHHHhcCCCC---------CCcCHHHHHHHHH
Confidence            5 8898877664       34689999999999876632 112233344444444432         1345899999999


Q ss_pred             HHhcCC--CCCCceEEecCCcc
Q 025702          201 QVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       201 ~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++...  .-.|+.+.+.+|..
T Consensus       237 fL~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         237 LLLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHhcchhCCCcCceEEECCCee
Confidence            998653  24689999988864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.52  E-value=2.8e-13  Score=103.98  Aligned_cols=197  Identities=17%  Similarity=0.113  Sum_probs=128.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|+++|++|++.+|+..+..+..    ...+.+....+.++.+|++|++++.+.++.     -++|+
T Consensus        24 TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~----~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   99 (272)
T d1g0oa_          24 TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV----VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI   99 (272)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHH----HHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999998865422111    112233356789999999999888887763     27999


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-c
Q 025702           76 VYDINGREAD------------------------EVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-K  130 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~  130 (249)
                      ++|+++....                        ..+.++..+.+..+.++++|.....          .+......| .
T Consensus       100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~----------~~~~~~~~Y~a  169 (272)
T d1g0oa_         100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA----------KAVPKHAVYSG  169 (272)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC----------SSCSSCHHHHH
T ss_pred             cccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc----------ccccchhhHHH
Confidence            9999886321                        1333444455556777777654310          111233346 8


Q ss_pred             chHHHHHHHh-------hcCCcEEEeecceeeCCCC----------C-cchHHHHHH-HHHcCCCeeecCCCcceEeeee
Q 025702          131 GKLNTESVLE-------SKGVNWTSLRPVYIYGPLN----------Y-NPVEEWFFH-RLKAGRPIPIPGSGIQVTQLGH  191 (249)
Q Consensus       131 ~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~----------~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~  191 (249)
                      +|...+.+.+       ..+++++.+.||.+-.+..          . ......... ...+..++         .-+..
T Consensus       170 sKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~~~  240 (272)
T d1g0oa_         170 SKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL---------RRVGL  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT---------CSCBC
T ss_pred             HHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC---------CCCcC
Confidence            8988777653       4689999999999865410          0 000111111 11222222         13566


Q ss_pred             HHHHHHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          192 VKDLARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       192 ~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      .+|+|+++.+++....  ..|+.+.+.+|..
T Consensus       241 peevA~~v~fL~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         241 PIDIARVVCFLASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence            8999999999997533  3788999988864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.50  E-value=1.7e-14  Score=109.52  Aligned_cols=189  Identities=13%  Similarity=0.072  Sum_probs=123.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh----C-CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~-~~d~   75 (249)
                      |||++.||+.+++.|.++|++|++.+|+.....+         ...  ....+..+|+.|.++++++++.    . ++|+
T Consensus         6 TGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~---------~~~--~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           6 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE---------LEA--FAETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH---------HHH--HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHh--hhCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999987655211         110  1112345677776555555432    1 7999


Q ss_pred             EEecCCCChh-------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD-------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~-------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++....                         .++.++..++  +..++|++||...+..           ......
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~-----------~~~~~~  143 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------WKELST  143 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------CTTCHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc-----------cccccc
Confidence            9999875211                         1233344444  5679999999775421           112234


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-------HHHHHHHHHcCCCeeecCCCcceEeeeeHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-------EEWFFHRLKAGRPIPIPGSGIQVTQLGHVK  193 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (249)
                      | .+|...+.+.+       ..++++..+.||.+-.+......       .+.....+.+..++.         -+..++
T Consensus       144 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~---------R~g~pe  214 (252)
T d1zmta1         144 YTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ---------RLGTQK  214 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS---------SCBCHH
T ss_pred             cccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC---------CCcCHH
Confidence            6 89988776653       46899999999999876421111       122333344433332         245589


Q ss_pred             HHHHHHHHHhcCCC--CCCceEEecCCcc
Q 025702          194 DLARAFVQVLGNEK--ASRQVFNISGEKY  220 (249)
Q Consensus       194 D~a~~~~~~~~~~~--~~~~~~~i~~~~~  220 (249)
                      |+|++++++++...  ..|+.+.+.+|-.
T Consensus       215 dvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         215 ELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            99999999997643  3789999998864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.49  E-value=7.4e-14  Score=105.11  Aligned_cols=172  Identities=14%  Similarity=0.141  Sum_probs=118.8

Q ss_pred             CCCcccchHHHHHHHHHcCCe-------EEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC--
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQ-------VTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK--   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~-------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~--   71 (249)
                      |||++-||+++++.|.++|++       |++.+|+.....+.     ..++...+..+.++.+|++|+++++++++..  
T Consensus         7 TGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~-----~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           7 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKI-----SLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHH-----HHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHH-----HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            799999999999999999987       88888886552211     1122223467888999999999888777632  


Q ss_pred             ---CCcEEEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCC
Q 025702           72 ---GFDVVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (249)
Q Consensus        72 ---~~d~Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (249)
                         ++|++||+++....                        .++.++..++  +..++|++||...+..           
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----------  150 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA-----------  150 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC-----------
Confidence               79999999986321                        1344455554  5679999999776421           


Q ss_pred             CCCCCcc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHH
Q 025702          123 VDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKD  194 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (249)
                      ......| .+|...+.+.       ...+++++.+.||.+-.+....               +   . ......+..++|
T Consensus       151 ~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------------~---~-~~~~~~~~~Ped  211 (240)
T d2bd0a1         151 FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------------V---D-DEMQALMMMPED  211 (240)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------------C---C-STTGGGSBCHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------------c---C-HhhHhcCCCHHH
Confidence            1123346 8898777654       3468999999999987763110               0   0 011123456899


Q ss_pred             HHHHHHHHhcCCC
Q 025702          195 LARAFVQVLGNEK  207 (249)
Q Consensus       195 ~a~~~~~~~~~~~  207 (249)
                      +|+++++++..+.
T Consensus       212 vA~~v~~l~s~~~  224 (240)
T d2bd0a1         212 IAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHHTSCT
T ss_pred             HHHHHHHHHcCCc
Confidence            9999999998764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.48  E-value=3e-14  Score=109.50  Aligned_cols=198  Identities=16%  Similarity=0.141  Sum_probs=126.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh---ccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||++-||+++++.|+++|++|++.+|+.++..+.     ..++.+   ...++..+.+|++|+++++++++..     +
T Consensus        10 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~-----~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   84 (274)
T d1xhla_          10 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEET-----KQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK   84 (274)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999999986542110     011111   1246889999999999888877642     7


Q ss_pred             CcEEEecCCCChh--------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREAD--------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        73 ~d~Vi~~~~~~~~--------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      +|++||++|....                          .++.++..+.  +..+++++||.....           +..
T Consensus        85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-----------~~~  153 (274)
T d1xhla_          85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-----------AHS  153 (274)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-----------CCT
T ss_pred             ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc-----------cCC
Confidence            9999999885210                          1223333343  455777777655321           111


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCC----c-chHHHHHHHHHcC-CCeeecCCCcceEeee
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----N-PVEEWFFHRLKAG-RPIPIPGSGIQVTQLG  190 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~----~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i  190 (249)
                      ....| .+|...+.+.+       ..+++++.+.||.+-.|...    . ............. ..+++       .-+.
T Consensus       154 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-------gR~g  226 (274)
T d1xhla_         154 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-------GHCG  226 (274)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SSCB
T ss_pred             CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-------CCCc
Confidence            23346 88988776643       46899999999999776310    0 1111111111111 11111       1245


Q ss_pred             eHHHHHHHHHHHhcCC---CCCCceEEecCCccc
Q 025702          191 HVKDLARAFVQVLGNE---KASRQVFNISGEKYV  221 (249)
Q Consensus       191 ~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~  221 (249)
                      .++|+|+++++++..+   .-.|+.+.+.+|..+
T Consensus       227 ~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l  260 (274)
T d1xhla_         227 KPEEIANIIVFLADRNLSSYIIGQSIVADGGSTL  260 (274)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHcCCccccCccCcEEEeCcCHHH
Confidence            6899999999998632   347899999998753

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.47  E-value=3.7e-14  Score=108.89  Aligned_cols=199  Identities=15%  Similarity=0.150  Sum_probs=125.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh---ccCceEEEEeccCCHHHHHHhhhhC-----C
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAK-----G   72 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~d~~d~~~l~~~~~~~-----~   72 (249)
                      |||++-||+++++.|.++|++|++.+|++.+..+..     ..+.+   ...++..+.+|++|+++++++++..     +
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   85 (272)
T d1xkqa_          11 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-----QIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   85 (272)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             eCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999875521100     11111   1346889999999999888877642     7


Q ss_pred             CcEEEecCCCChh------------------------h----hHHHHHhCC-CCCeEEEeec-cccccCCCCCCCCCCCC
Q 025702           73 FDVVYDINGREAD------------------------E----VEPILDALP-NLEQFIYCSS-AGVYLKSDLLPHCETDT  122 (249)
Q Consensus        73 ~d~Vi~~~~~~~~------------------------~----~~~~~~a~~-~~~~~i~~Ss-~~v~~~~~~~~~~e~~~  122 (249)
                      +|++||++|....                        +    ++.++..++ +..++|+++| ....           .+
T Consensus        86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~-----------~~  154 (272)
T d1xkqa_          86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP-----------QA  154 (272)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS-----------SC
T ss_pred             ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc-----------cC
Confidence            9999999886311                        1    222333333 3345665555 3321           11


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCC----c-chHHHHHHHHHcC-CCeeecCCCcceEe
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNY----N-PVEEWFFHRLKAG-RPIPIPGSGIQVTQ  188 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~----~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~  188 (249)
                      ......| .+|...+.+.+       ..++++..+.||.+-.+...    . ............. ..+++       .-
T Consensus       155 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-------gR  227 (272)
T d1xkqa_         155 QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-------GA  227 (272)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SS
T ss_pred             CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-------CC
Confidence            1123346 88988776643       46899999999998766310    0 1111111111111 11111       12


Q ss_pred             eeeHHHHHHHHHHHhcCC---CCCCceEEecCCcccc
Q 025702          189 LGHVKDLARAFVQVLGNE---KASRQVFNISGEKYVT  222 (249)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~---~~~~~~~~i~~~~~~s  222 (249)
                      +..++|+|+++++++..+   ...|+.+.+.+|..+.
T Consensus       228 ~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         228 AGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             CcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            556899999999998642   2478999999987653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.45  E-value=1.6e-13  Score=106.63  Aligned_cols=199  Identities=17%  Similarity=0.161  Sum_probs=127.3

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||+|.||+++++.|+++|++|++++|+..+..+...    ....+....+..+.+|++|.+++.++++.     .++|+
T Consensus        31 TGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~----~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi  106 (294)
T d1w6ua_          31 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE----QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  106 (294)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH----HHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccch
Confidence            7999999999999999999999999998765321110    11112346788999999999988776643     37999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhC--C-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           76 VYDINGREAD--------------------E----VEPILDAL--P-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~--~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +||+++....                    .    .......+  . ....++.+||......           ......
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~-----------~~~~~~  175 (294)
T d1w6ua_         107 VINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-----------SGFVVP  175 (294)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-----------CTTCHH
T ss_pred             hhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc-----------ccccch
Confidence            9999986321                    0    11111111  1 4456677766554211           112223


Q ss_pred             c-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCc--chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYN--PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+       ..++++..+.||.+-.+....  ...........+..++.         -+..++|+|++
T Consensus       176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~  246 (294)
T d1w6ua_         176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------RLGTVEELANL  246 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------SCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------CCCCHHHHHHH
Confidence            5 88988877653       468999999999997764211  11112233334433332         24458999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCccccH
Q 025702          199 FVQVLGNE--KASRQVFNISGEKYVTF  223 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~~s~  223 (249)
                      +.+++...  --.|+++.+.+|..+..
T Consensus       247 v~fL~sd~s~~itG~~i~vDGG~~l~~  273 (294)
T d1w6ua_         247 AAFLCSDYASWINGAVIKFDGGEEVLI  273 (294)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTHHHHH
T ss_pred             HHHHhCchhcCCCCcEEEECCChhhee
Confidence            99999753  34789999999875433

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.44  E-value=1.9e-13  Score=105.00  Aligned_cols=192  Identities=19%  Similarity=0.177  Sum_probs=125.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|.++|++|++++|+++...+        ...+...++..+.+|+++.++++++++.     -++|+
T Consensus        11 TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~--------~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_          11 TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE--------LETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            7999999999999999999999999998654221        1122356789999999999888877753     27999


Q ss_pred             EEecCCCChh-----------------------------hhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           76 VYDINGREAD-----------------------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        76 Vi~~~~~~~~-----------------------------~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      +||+||....                             .++.++..++ +..++|++||...+-.           ...
T Consensus        83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~-----------~~~  151 (276)
T d1bdba_          83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYP-----------NGG  151 (276)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTST-----------TSS
T ss_pred             ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccC-----------CCC
Confidence            9999985210                             1223344443 3468888887654311           112


Q ss_pred             CCcc-cchHHHHHHHh------hcCCcEEEeecceeeCCCCCcch---------HHHHHHHHHcCCCeeecCCCcceEee
Q 025702          126 KSRH-KGKLNTESVLE------SKGVNWTSLRPVYIYGPLNYNPV---------EEWFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~------~~~~~~~~~r~~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                      ...| .+|...+.+.+      ..++++..+.||.+-.+......         ...+...+.+..++.         -+
T Consensus       152 ~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~  222 (276)
T d1bdba_         152 GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG---------RM  222 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS---------SC
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC---------CC
Confidence            2336 88988776543      13489999999998765321110         111222233333322         23


Q ss_pred             eeHHHHHHHHHHHhcC---CCCCCceEEecCCcc
Q 025702          190 GHVKDLARAFVQVLGN---EKASRQVFNISGEKY  220 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~---~~~~~~~~~i~~~~~  220 (249)
                      ..++|+|+++++++..   ....|+.+++.+|-.
T Consensus       223 g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~  256 (276)
T d1bdba_         223 PEVEEYTGAYVFFATRGDAAPATGALLNYDGGLG  256 (276)
T ss_dssp             CCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGG
T ss_pred             cCHHHHHHHHHHHcCCcccCCeeCcEEEECcChh
Confidence            4589999999998753   234789999988754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.41  E-value=3.3e-12  Score=97.27  Aligned_cols=181  Identities=16%  Similarity=0.129  Sum_probs=117.4

Q ss_pred             CCCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhC----CCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAK----GFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~----~~d~   75 (249)
                      |||+|.||.++++.|.++|+ +|+++.|+..+... . .....++...+..+.++.+|++|.++++++++..    ..|.
T Consensus        15 TGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~-~-~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~   92 (259)
T d2fr1a1          15 TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG-A-GELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSA   92 (259)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT-H-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEE
T ss_pred             ECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHH-H-HHHHHHHHhccccccccccccchHHHHHHhhccccccccccc
Confidence            79999999999999999998 57778886433111 0 0011222333567899999999999998887642    5899


Q ss_pred             EEecCCCCh--------------------hhhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           76 VYDINGREA--------------------DEVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        76 Vi~~~~~~~--------------------~~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      |+|+++...                    .+...+.+++.  ...++|++||...+-..           .....| .+|
T Consensus        93 vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~-----------~~~~~YaAak  161 (259)
T d2fr1a1          93 VFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA-----------PGLGGYAPGN  161 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC-----------TTCTTTHHHH
T ss_pred             cccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCC-----------cccHHHHHHH
Confidence            999988631                    23444555554  56789999987764211           112235 888


Q ss_pred             HHHHHHH---hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCCCC
Q 025702          133 LNTESVL---ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKA  208 (249)
Q Consensus       133 ~~~e~~~---~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  208 (249)
                      ...+.+.   +..+++++.+.||.+.+++.....   ..    +  .+.     ..-...+..+++++++..++.++..
T Consensus       162 a~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~---~~----~--~~~-----~~G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         162 AYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGP---VA----D--RFR-----RHGVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCBC---------------------CT-----TTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             HhHHHHHHHHHhCCCCEEECCCCcccCCccccch---HH----H--HHH-----hcCCCCCCHHHHHHHHHHHHhCCCc
Confidence            8777654   457899999999988776421110   00    0  010     0113467899999999999988754

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=1e-11  Score=94.45  Aligned_cols=195  Identities=14%  Similarity=0.108  Sum_probs=126.5

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|  -||+++++.|+++|++|++..|++..... .     .+..........+..|..+..+....++.     ...
T Consensus        11 TGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (258)
T d1qsga_          11 TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGR-V-----EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   84 (258)
T ss_dssp             CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHH-H-----HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             ECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H-----HHHHhhcCCcceeecccchHHHHHHHHHHhhhccccc
Confidence            79988  68899999999999999999998543111 0     12222245677788898887766655532     268


Q ss_pred             cEEEecCCCChh-------------------------hhHHHHHhC----CCCCeEEEeeccccccCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD-------------------------EVEPILDAL----PNLEQFIYCSSAGVYLKSDLLPHCETDTVD  124 (249)
Q Consensus        74 d~Vi~~~~~~~~-------------------------~~~~~~~a~----~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~  124 (249)
                      |.++|+++....                         ....+..++    ++.+.+|++||.....           +..
T Consensus        85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~-----------~~~  153 (258)
T d1qsga_          85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------AIP  153 (258)
T ss_dssp             EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------BCT
T ss_pred             ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc-----------CCC
Confidence            999999876311                         122233332    2345688888876521           112


Q ss_pred             CCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcc-hHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          125 PKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNP-VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       125 ~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ....| .+|...+.+.+       ..++++..++||.+..+..... ..........+..++.         -+..++|+
T Consensus       154 ~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peei  224 (258)
T d1qsga_         154 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR---------RTVTIEDV  224 (258)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS---------SCCCHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC---------CCcCHHHH
Confidence            23346 89988887653       4679999999999988753221 2222333333333321         24558999


Q ss_pred             HHHHHHHhcCC--CCCCceEEecCCccc
Q 025702          196 ARAFVQVLGNE--KASRQVFNISGEKYV  221 (249)
Q Consensus       196 a~~~~~~~~~~--~~~~~~~~i~~~~~~  221 (249)
                      |+++.+++.+.  .-.|+++.+.+|..+
T Consensus       225 a~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         225 GNSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCchhcCccCceEEECcCHHH
Confidence            99999999653  347899999998754

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.7e-12  Score=98.54  Aligned_cols=183  Identities=16%  Similarity=0.165  Sum_probs=114.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||++-||.++++.|.++|++|++..|++.+..+..     .++..  ....+.++.+|++|++++.++++.     -++
T Consensus        16 TGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i   90 (257)
T d1xg5a_          16 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-----AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV   90 (257)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----HHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            799999999999999999999999999865522110     11111  124788899999999988887753     279


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHhCC----CCCeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDALP----NLEQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a~~----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |++||+|+....                        .++.++..+.    +..++|++||...+..         .+...
T Consensus        91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~---------~p~~~  161 (257)
T d1xg5a_          91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV---------LPLSV  161 (257)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC---------CSCGG
T ss_pred             CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC---------CCCcc
Confidence            999999987321                        1222333322    3469999998775311         11112


Q ss_pred             CCcc-cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHH
Q 025702          126 KSRH-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL  195 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  195 (249)
                      ...| .+|...+.+.+         ..++++..+.||.+-.+... ..............         ....+..++|+
T Consensus       162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~-~~~~~~~~~~~~~~---------~~~r~~~pedv  231 (257)
T d1xg5a_         162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF-KLHDKDPEKAAATY---------EQMKCLKPEDV  231 (257)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH-HHTTTCHHHHHHHH---------C---CBCHHHH
T ss_pred             cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh-hcChhhHHHHHhcC---------CCCCCcCHHHH
Confidence            2335 88877766542         35788999999877554200 00000001111111         12345679999


Q ss_pred             HHHHHHHhcCCC
Q 025702          196 ARAFVQVLGNEK  207 (249)
Q Consensus       196 a~~~~~~~~~~~  207 (249)
                      |++++++++.+.
T Consensus       232 A~~v~fL~s~~a  243 (257)
T d1xg5a_         232 AEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhCChh
Confidence            999999998764

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.37  E-value=1.8e-12  Score=100.60  Aligned_cols=207  Identities=12%  Similarity=0.078  Sum_probs=131.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCC-CCchhhhhccCceEEEEeccCCHHHHHHhhhh----C-CCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-ESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA----K-GFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~----~-~~d   74 (249)
                      |||++-||+++++.|+++|++|++.+|+.+.....-.. ..+....+.......+.+|+.|.+..+++++.    . ++|
T Consensus        13 TGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iD   92 (302)
T d1gz6a_          13 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRID   92 (302)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCC
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999876542211110 01111222233445567788877665555542    2 799


Q ss_pred             EEEecCCCChh------------------------hhHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD------------------------EVEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~------------------------~~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      ++||+||....                        .++.++..++  +..++|++||...+-.           ......
T Consensus        93 iLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~-----------~~~~~~  161 (302)
T d1gz6a_          93 VVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG-----------NFGQAN  161 (302)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------CTTCHH
T ss_pred             EEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCC-----------CCCcHH
Confidence            99999987321                        1333444554  5679999999775421           112234


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      | .+|...+.+.       ...++++..+.|+.+-.+.  ....+                  ......+.++|+|.+++
T Consensus       162 Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~--~~~~~------------------~~~~~~~~PedvA~~v~  221 (302)
T d1gz6a_         162 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT--ETVMP------------------EDLVEALKPEYVAPLVL  221 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT--GGGSC------------------HHHHHHSCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcch--hhcCc------------------HhhHhcCCHHHHHHHHH
Confidence            6 8998877664       3468999999998763321  11100                  01112345799999999


Q ss_pred             HHhcCC-CCCCceEEecCC-------------------ccccHHHHHHHHHHHhCCCc
Q 025702          201 QVLGNE-KASRQVFNISGE-------------------KYVTFDGLARACAKVTGYCI  238 (249)
Q Consensus       201 ~~~~~~-~~~~~~~~i~~~-------------------~~~s~~~l~~~~~~~~g~~~  238 (249)
                      +++... ...|+++.+.+|                   .+.|..++++.+.+....+.
T Consensus       222 fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~~  279 (302)
T d1gz6a_         222 WLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSN  279 (302)
T ss_dssp             HHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTT
T ss_pred             HHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCccc
Confidence            988532 235777776655                   23567888888888876544

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.1e-13  Score=102.69  Aligned_cols=171  Identities=15%  Similarity=0.163  Sum_probs=116.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||++++++|+++|++|++.+|++.+..+.     ..++.....++..+.+|++|++++.++++.     -++|+
T Consensus        13 TGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~-----~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi   87 (244)
T d1yb1a_          13 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEET-----AAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI   87 (244)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence            79999999999999999999999999987653211     122333356889999999999988877753     26999


Q ss_pred             EEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc
Q 025702           76 VYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH  129 (249)
Q Consensus        76 Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  129 (249)
                      +||+++....                    +    ++.++..+.  +..++|++||...+.           +......|
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~-----------~~~~~~~Y  156 (244)
T d1yb1a_          88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-----------SVPFLLAY  156 (244)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------CHHHHHHH
T ss_pred             eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC-----------CCCCcHHH
Confidence            9999987321                    1    333444444  567899999977631           11112346


Q ss_pred             -cchHHHHHHHh-------h---cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          130 -KGKLNTESVLE-------S---KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       130 -~~k~~~e~~~~-------~---~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                       .+|...+.+.+       .   .+++++.+.||.+-.+......                    ......+..+|+|+.
T Consensus       157 ~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~--------------------~~~~~~~~pe~va~~  216 (244)
T d1yb1a_         157 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS--------------------TSLGPTLEPEEVVNR  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH--------------------HHHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC--------------------ccccCCCCHHHHHHH
Confidence             88987666542       1   4689999999987655321110                    011234468999999


Q ss_pred             HHHHhcCCC
Q 025702          199 FVQVLGNEK  207 (249)
Q Consensus       199 ~~~~~~~~~  207 (249)
                      ++..+..+.
T Consensus       217 i~~~~~~~~  225 (244)
T d1yb1a_         217 LMHGILTEQ  225 (244)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHhcCC
Confidence            999887754

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.33  E-value=1.6e-12  Score=98.54  Aligned_cols=191  Identities=17%  Similarity=0.092  Sum_probs=122.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccC-CHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~-d~~~l~~~~~~-----~~~d   74 (249)
                      |||++-||..++++|+++|.+|+++.|+.++.... .   +........++.++.+|++ +.+++.++++.     -++|
T Consensus        11 TGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD   86 (254)
T d1sbya1          11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-A---ELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-H---HHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             ecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-H---HHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999887653211 0   0011112357888999997 55556655542     2799


Q ss_pred             EEEecCCCChh----------------hhHHHHHhCC-----CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cch
Q 025702           75 VVYDINGREAD----------------EVEPILDALP-----NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGK  132 (249)
Q Consensus        75 ~Vi~~~~~~~~----------------~~~~~~~a~~-----~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k  132 (249)
                      ++||+||....                .++.++..+.     ...++|++||...+.           +......| .+|
T Consensus        87 ilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~-----------~~~~~~~Y~asK  155 (254)
T d1sbya1          87 ILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-----------AIHQVPVYSASK  155 (254)
T ss_dssp             EEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------CCTTSHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc-----------CCCCCHHHHHHH
Confidence            99999997321                1333444443     236799999877641           11223345 889


Q ss_pred             HHHHHHH-------hhcCCcEEEeecceeeCCCC--Ccch--HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHH
Q 025702          133 LNTESVL-------ESKGVNWTSLRPVYIYGPLN--YNPV--EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQ  201 (249)
Q Consensus       133 ~~~e~~~-------~~~~~~~~~~r~~~v~g~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  201 (249)
                      .....+.       ...+++++.+.||.+..+..  ....  ....+.....            .+.....+++|++++.
T Consensus       156 aal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~va~~~~~  223 (254)
T d1sbya1         156 AAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQNFVK  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc------------cCCCCCHHHHHHHHHH
Confidence            8776654       35689999999999987620  0000  0000000000            1234468999999999


Q ss_pred             HhcCCCCCCceEEecCCc
Q 025702          202 VLGNEKASRQVFNISGEK  219 (249)
Q Consensus       202 ~~~~~~~~~~~~~i~~~~  219 (249)
                      +++... .|+++.+.+|.
T Consensus       224 ~~~~~~-tG~vi~vdgG~  240 (254)
T d1sbya1         224 AIEANK-NGAIWKLDLGT  240 (254)
T ss_dssp             HHHHCC-TTCEEEEETTE
T ss_pred             hhhCCC-CCCEEEECCCE
Confidence            887765 68899988875

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.32  E-value=2.5e-11  Score=91.18  Aligned_cols=184  Identities=16%  Similarity=0.168  Sum_probs=117.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh----hCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----AKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~----~~~~d~V   76 (249)
                      |||++-||+++++.|.++|++|++++|+++.                 .+...+.+|+.+......+..    ....+.+
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           7 TGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence            7999999999999999999999999998654                 345567889987655554443    2344555


Q ss_pred             EecCCCCh-------------h---------------hhHHHHHh------CC--CCCeEEEeeccccccCCCCCCCCCC
Q 025702           77 YDINGREA-------------D---------------EVEPILDA------LP--NLEQFIYCSSAGVYLKSDLLPHCET  120 (249)
Q Consensus        77 i~~~~~~~-------------~---------------~~~~~~~a------~~--~~~~~i~~Ss~~v~~~~~~~~~~e~  120 (249)
                      ++.++...             .               ..+.++..      +.  +..++|++||...+-.         
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~---------  140 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---------  140 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC---------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC---------
Confidence            55443210             0               01112222      11  3468999999776422         


Q ss_pred             CCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeH
Q 025702          121 DTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHV  192 (249)
Q Consensus       121 ~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  192 (249)
                        ......| .+|...+.+.+       ..++++..+.||.+..+..... ............++  .+      -+..+
T Consensus       141 --~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~~--~~------R~g~p  209 (241)
T d1uaya_         141 --QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL-PEKAKASLAAQVPF--PP------RLGRP  209 (241)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS-CHHHHHHHHTTCCS--SC------SCCCH
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh-hhhHHHHHHhcCCC--CC------CCcCH
Confidence              1122345 89988877653       4689999999999876531111 11222222233221  11      23458


Q ss_pred             HHHHHHHHHHhcCCCCCCceEEecCCccc
Q 025702          193 KDLARAFVQVLGNEKASRQVFNISGEKYV  221 (249)
Q Consensus       193 ~D~a~~~~~~~~~~~~~~~~~~i~~~~~~  221 (249)
                      +|+|++++++++.....|+++.+.+|-.+
T Consensus       210 edvA~~v~fL~s~~~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         210 EEYAALVLHILENPMLNGEVVRLDGALRM  238 (241)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHHhCCCCCCCEEEECCcccC
Confidence            99999999999876567899999887543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=4e-11  Score=90.53  Aligned_cols=187  Identities=16%  Similarity=0.191  Sum_probs=117.5

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||.+++++|.++|++|++++|+.+...        ....+.........+|+.+.+.++.....     ...|.
T Consensus        11 TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1          11 TGGASGLGLATAERLVGQGASAVLLDLPNSGGE--------AQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH--------HHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH--------HHHHHhCCCcccccccccccccccccccccccccccccc
Confidence            799999999999999999999999999876632        12223356788888999887665544432     36788


Q ss_pred             EEecCCCChh--------------------------h----hHHHHHhCC--------CCCeEEEeeccccccCCCCCCC
Q 025702           76 VYDINGREAD--------------------------E----VEPILDALP--------NLEQFIYCSSAGVYLKSDLLPH  117 (249)
Q Consensus        76 Vi~~~~~~~~--------------------------~----~~~~~~a~~--------~~~~~i~~Ss~~v~~~~~~~~~  117 (249)
                      +++.++.+..                          +    ++.++..+.        +..++|++||...+..      
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------  156 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG------  156 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC------
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC------
Confidence            8877543210                          1    122222211        2347999999876421      


Q ss_pred             CCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEee
Q 025702          118 CETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQL  189 (249)
Q Consensus       118 ~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (249)
                           ......| .+|...+.+.+       ..++++..+.||.+..+.. ..+.........+..++  .+      -+
T Consensus       157 -----~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~-~~~~~~~~~~~~~~~pl--~~------R~  222 (248)
T d2o23a1         157 -----QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL-TSLPEKVCNFLASQVPF--PS------RL  222 (248)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSS--SC------SC
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchh-hcCCHHHHHHHHhcCCC--CC------CC
Confidence                 1223346 99988887653       4689999999999877642 11122222222232221  11      24


Q ss_pred             eeHHHHHHHHHHHhcCCCCCCceEEe
Q 025702          190 GHVKDLARAFVQVLGNEKASRQVFNI  215 (249)
Q Consensus       190 i~~~D~a~~~~~~~~~~~~~~~~~~i  215 (249)
                      ..++|+|++++++++.+--.|++++|
T Consensus       223 g~peevA~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         223 GDPAEYAHLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             cCHHHHHHHHHHHHhCCCCCceEeEC
Confidence            56899999999999865556666654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=8.9e-12  Score=95.99  Aligned_cols=197  Identities=16%  Similarity=0.129  Sum_probs=117.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEe---cCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh---CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFT---RGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA---KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~---r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~---~~~d   74 (249)
                      |||++-||+++++.|.++|.+|+.+.   |+...... +. .....+.....++..+.+|++|.+++.++++.   ..+|
T Consensus         8 TGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~-l~-~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~id   85 (285)
T d1jtva_           8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR-LW-EAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVD   85 (285)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHH-HH-HHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCS
T ss_pred             ccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHH-HH-HHHHHHhccCCceEEEeccccchHhhhhhhhhccccchh
Confidence            79999999999999999998755554   43322110 00 00001111245789999999999998887753   3699


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCC--CCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALP--NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~--~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      +++|+++....                    +    ++.++..++  +..++|++||...+-           +......
T Consensus        86 ilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~-----------~~~~~~~  154 (285)
T d1jtva_          86 VLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-----------GLPFNDV  154 (285)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS-----------CCTTCHH
T ss_pred             hhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC-----------CCCCchH
Confidence            99999886311                    1    333444444  567999999977631           1122334


Q ss_pred             c-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcc--h------------HHHHHHHHHcCCCeeecCCCcce
Q 025702          129 H-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNP--V------------EEWFFHRLKAGRPIPIPGSGIQV  186 (249)
Q Consensus       129 ~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~  186 (249)
                      | .+|...+.+.       ...+++++.+.||.+-.+.....  .            ...+.........+.       .
T Consensus       155 Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  227 (285)
T d1jtva_         155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF-------R  227 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH-------H
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh-------c
Confidence            6 8898877664       35689999999999876531110  0            001111111101010       1


Q ss_pred             EeeeeHHHHHHHHHHHhcCCCCCCceEEecCCc
Q 025702          187 TQLGHVKDLARAFVQVLGNEKASRQVFNISGEK  219 (249)
Q Consensus       187 ~~~i~~~D~a~~~~~~~~~~~~~~~~~~i~~~~  219 (249)
                      .....++|+|+++++++..+.+  ...++.+..
T Consensus       228 ~~~~~PeeVA~~v~~~~~~~~p--~~ry~~g~~  258 (285)
T d1jtva_         228 EAAQNPEEVAEVFLTALRAPKP--TLRYFTTER  258 (285)
T ss_dssp             HHCBCHHHHHHHHHHHHHCSSC--CSEEESCST
T ss_pred             ccCCCHHHHHHHHHHHHhCCCC--CeEEecHHH
Confidence            1245689999999999988653  223355533

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=1.2e-12  Score=99.67  Aligned_cols=190  Identities=16%  Similarity=0.098  Sum_probs=117.3

Q ss_pred             CCCcccchHHHHHHHHH---cCCeEEEEecCCCccccCCCCCCchhhhh--ccCceEEEEeccCCHHHHHHhhhh-----
Q 025702            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAE--FSSKILHLKGDRKDYDFVKSSLSA-----   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~d~~d~~~l~~~~~~-----   70 (249)
                      |||++-||++++++|.+   +|++|++++|+.....+..     .++..  ...++.++.+|++|++++.++++.     
T Consensus        12 TGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~-----~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~   86 (259)
T d1oaaa_          12 TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-----EELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-----HHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             eCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH-----HHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence            79999999999999975   6999999999876532110     11111  134688899999999888877642     


Q ss_pred             ----CCCcEEEecCCCCh-----------------------h----hhHHHHHhCC--C--CCeEEEeeccccccCCCCC
Q 025702           71 ----KGFDVVYDINGREA-----------------------D----EVEPILDALP--N--LEQFIYCSSAGVYLKSDLL  115 (249)
Q Consensus        71 ----~~~d~Vi~~~~~~~-----------------------~----~~~~~~~a~~--~--~~~~i~~Ss~~v~~~~~~~  115 (249)
                          ...|+++|+++...                       .    .++.++..++  +  ..++|++||...+.     
T Consensus        87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~-----  161 (259)
T d1oaaa_          87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-----  161 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-----
T ss_pred             hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC-----
Confidence                24678999877421                       0    1333455555  2  35899999876531     


Q ss_pred             CCCCCCCCCCCCcc-cchHHHHHHH-----hhcCCcEEEeecceeeCCCCCcc----hHHHHHHHHHcCCCeeecCCCcc
Q 025702          116 PHCETDTVDPKSRH-KGKLNTESVL-----ESKGVNWTSLRPVYIYGPLNYNP----VEEWFFHRLKAGRPIPIPGSGIQ  185 (249)
Q Consensus       116 ~~~e~~~~~~~~~~-~~k~~~e~~~-----~~~~~~~~~~r~~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  185 (249)
                            +......| .+|...+.+.     +..++++..+.||.+..+.....    ..+.....+....+         
T Consensus       162 ------~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---------  226 (259)
T d1oaaa_         162 ------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS---------  226 (259)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH---------
T ss_pred             ------CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCC---------
Confidence                  11223446 8898877654     34688999999999876521000    00011111111000         


Q ss_pred             eEeeeeHHHHHHHHHHHhcCCC-CCCceEEe
Q 025702          186 VTQLGHVKDLARAFVQVLGNEK-ASRQVFNI  215 (249)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~i  215 (249)
                      ...+..++|+|++++.+++... ..|+.+++
T Consensus       227 ~~r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         227 DGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             TTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CCCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            0123568999999999886532 34555554

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.24  E-value=1.4e-10  Score=88.83  Aligned_cols=194  Identities=11%  Similarity=0.045  Sum_probs=121.4

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCC
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGF   73 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~   73 (249)
                      |||+|  -||.+++++|+++|++|++++|++.....      ..++.+......+..+|+++++.+.++++.     -.+
T Consensus        11 TGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~------~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~i   84 (274)
T d2pd4a1          11 VGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKR------VRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   84 (274)
T ss_dssp             ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHH------HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             ECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH------HHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCC
Confidence            68876  69999999999999999999998532110      112223345677889999998877766642     279


Q ss_pred             cEEEecCCCChh------------------------hhHHHHHh-CC--CC-CeEEEeeccccccCCCCCCCCCCCCCCC
Q 025702           74 DVVYDINGREAD------------------------EVEPILDA-LP--NL-EQFIYCSSAGVYLKSDLLPHCETDTVDP  125 (249)
Q Consensus        74 d~Vi~~~~~~~~------------------------~~~~~~~a-~~--~~-~~~i~~Ss~~v~~~~~~~~~~e~~~~~~  125 (249)
                      |+++|+++....                        ........ ..  +. ..++.+|+.....           +...
T Consensus        85 d~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-----------~~~~  153 (274)
T d2pd4a1          85 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-----------YMAH  153 (274)
T ss_dssp             EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------BCTT
T ss_pred             CeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc-----------cccc
Confidence            999999886321                        01111111 12  22 3355555444321           1122


Q ss_pred             CCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcch-HHHHHHHHHcCCCeeecCCCcceEeeeeHHHHH
Q 025702          126 KSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPV-EEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLA  196 (249)
Q Consensus       126 ~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  196 (249)
                      ...| .+|...+.+.+       ..++++..+.||.+..+...... ............+.         .-+..++|+|
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedIA  224 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVG  224 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHH
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------cCCcCHHHHH
Confidence            2345 78888777653       46899999999999876432211 12222222222222         1245689999


Q ss_pred             HHHHHHhcCC--CCCCceEEecCCcc
Q 025702          197 RAFVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       197 ~~~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++.++++..  ...|+.+.+.+|..
T Consensus       225 ~~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         225 NAGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhChhhCCCcCceEEECCChh
Confidence            9999999763  24788999999874

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.22  E-value=5.1e-11  Score=91.74  Aligned_cols=200  Identities=11%  Similarity=0.036  Sum_probs=117.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchh--------------hhhccCceEEEEeccCCHHHHHH
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQE--------------FAEFSSKILHLKGDRKDYDFVKS   66 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~v~~~~~d~~d~~~l~~   66 (249)
                      |||++-||+++++.|.++|++|++.+|+.......+.+.....              .......+....+|+++.+++++
T Consensus         8 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~~   87 (284)
T d1e7wa_           8 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAE   87 (284)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHHH
Confidence            7999999999999999999999998887644221111000000              00001223345567888888877


Q ss_pred             hhhh-----CCCcEEEecCCCChhh-----------------------hHHHH-----------H-------h---CC--
Q 025702           67 SLSA-----KGFDVVYDINGREADE-----------------------VEPIL-----------D-------A---LP--   95 (249)
Q Consensus        67 ~~~~-----~~~d~Vi~~~~~~~~~-----------------------~~~~~-----------~-------a---~~--   95 (249)
                      +++.     -++|++||++|.....                       ...++           +       .   .+  
T Consensus        88 ~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~  167 (284)
T d1e7wa_          88 LVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRG  167 (284)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSC
T ss_pred             HHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcC
Confidence            7653     2799999998863110                       00011           1       1   11  


Q ss_pred             CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHH
Q 025702           96 NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWF  167 (249)
Q Consensus        96 ~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~  167 (249)
                      +..++|+++|....           .+......| .+|...+.+.+       ..++++..+.||..-...   ......
T Consensus       168 ~~~~ii~~~s~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~---~~~~~~  233 (284)
T d1e7wa_         168 TNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD---DMPPAV  233 (284)
T ss_dssp             SCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG---GSCHHH
T ss_pred             CCCccccccccccc-----------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc---cCCHHH
Confidence            23466777665532           112223346 88988777653       468999999998642221   122333


Q ss_pred             HHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          168 FHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                      .....+..++  .+      -+..++|+|+++++++...  ...|+.+.+.+|..++
T Consensus       234 ~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         234 WEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            4444444332  11      2445899999999999753  2478999999987654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.19  E-value=1.4e-10  Score=88.38  Aligned_cols=195  Identities=14%  Similarity=0.139  Sum_probs=117.9

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhh-hccCceEEEEeccCC----HHHHHHhhhh-----
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFA-EFSSKILHLKGDRKD----YDFVKSSLSA-----   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~d~~d----~~~l~~~~~~-----   70 (249)
                      |||++-||.+++++|+++|++|++++|+.++..+.+.    .++. ........+..|..+    .+.+.++++.     
T Consensus         7 TGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           7 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV----AELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH----HHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999999765322111    1111 113456666666643    3444443321     


Q ss_pred             CCCcEEEecCCCChhh-----------------------------------hHHHHHhCC-------CCCeEEEeecccc
Q 025702           71 KGFDVVYDINGREADE-----------------------------------VEPILDALP-------NLEQFIYCSSAGV  108 (249)
Q Consensus        71 ~~~d~Vi~~~~~~~~~-----------------------------------~~~~~~a~~-------~~~~~i~~Ss~~v  108 (249)
                      -++|++||++|.....                                   .......+.       ....++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            2799999999852110                                   011111111       1234555555443


Q ss_pred             ccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeec
Q 025702          109 YLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP  180 (249)
Q Consensus       109 ~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  180 (249)
                      .           .+......| .+|...+.+.+       +.++++..+.||.+..+....   ........+..++   
T Consensus       163 ~-----------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---~~~~~~~~~~~pl---  225 (266)
T d1mxha_         163 D-----------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---QETQEEYRRKVPL---  225 (266)
T ss_dssp             G-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---HHHHHHHHTTCTT---
T ss_pred             c-----------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---HHHHHHHHhcCCC---
Confidence            2           111123335 78988777643       468999999999987764322   2233344443332   


Q ss_pred             CCCcceEeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCccc
Q 025702          181 GSGIQVTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYV  221 (249)
Q Consensus       181 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~  221 (249)
                      +     +-+..++|+|+++++++....  -.|+.+.+.+|..+
T Consensus       226 ~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         226 G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            1     123458999999999997643  47889999998754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.18  E-value=1.7e-10  Score=86.34  Aligned_cols=171  Identities=12%  Similarity=0.074  Sum_probs=108.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHH-------hhhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKS-------SLSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~-------~~~~~~~   73 (249)
                      |||+|-||+++++.|.++|++|+++++......               .....+..|..+.+..+.       .+...++
T Consensus         8 TGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           8 YGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999998765421               223334445544333322       2222368


Q ss_pred             cEEEecCCCChh-------------------------hhHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           74 DVVYDINGREAD-------------------------EVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        74 d~Vi~~~~~~~~-------------------------~~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |++||++|....                         ..+.++..+++..++|++||...+..           ......
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-----------~~~~~~  141 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------TPGMIG  141 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC-----------ccCCcc
Confidence            999999884210                         12223333444468999999776411           112234


Q ss_pred             c-cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+         ..+++++.+.||.+..|.         ........         ..-.++..+++++.
T Consensus       142 Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~---------~~~~~~~~---------~~~~~~~pe~va~~  203 (236)
T d1dhra_         142 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM---------NRKSMPEA---------DFSSWTPLEFLVET  203 (236)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH---------HHHHSTTS---------CGGGSEEHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc---------chhhCccc---------hhhcCCCHHHHHHH
Confidence            6 89988887753         246899999999987762         11111111         11245678999999


Q ss_pred             HHHHhcCCC--CCCceEEe
Q 025702          199 FVQVLGNEK--ASRQVFNI  215 (249)
Q Consensus       199 ~~~~~~~~~--~~~~~~~i  215 (249)
                      +..++....  ..|..+.+
T Consensus       204 ~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         204 FHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHHHTTTTCCCTTCEEEE
T ss_pred             HHHHhCCCccCCCCCeEEE
Confidence            999987643  35666655

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.17  E-value=5.3e-10  Score=84.30  Aligned_cols=184  Identities=16%  Similarity=0.118  Sum_probs=109.1

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-------C
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K   71 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-------~   71 (249)
                      |||++-||.+++++|+++|+  .|++.+|+.+...+. .       .....++.++.+|++|.++++++++.       .
T Consensus         9 TGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l-~-------~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           9 TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-K-------SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH-H-------TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             eCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHH-H-------HhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999984  788888887653221 0       11145799999999998887766642       2


Q ss_pred             CCcEEEecCCCChh---------------------hh----HHHHHhCC-------------CCCeEEEeeccccccCCC
Q 025702           72 GFDVVYDINGREAD---------------------EV----EPILDALP-------------NLEQFIYCSSAGVYLKSD  113 (249)
Q Consensus        72 ~~d~Vi~~~~~~~~---------------------~~----~~~~~a~~-------------~~~~~i~~Ss~~v~~~~~  113 (249)
                      +.|++||+||....                     +.    +.++..++             ...+++.+|+...+-...
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            48999999985211                     11    11222221             124677777654431111


Q ss_pred             CCCCCCCCCCCCCCcc-cchHHHHHHH-------hhcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcc
Q 025702          114 LLPHCETDTVDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQ  185 (249)
Q Consensus       114 ~~~~~e~~~~~~~~~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (249)
                      .    ......+...| .+|.....+.       +..+++++.+.||++-.+..                     +    
T Consensus       161 ~----~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~---------------------~----  211 (250)
T d1yo6a1         161 T----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG---------------------G----  211 (250)
T ss_dssp             C----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             c----ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC---------------------C----
Confidence            0    01112222336 8898766554       35689999999998755420                     0    


Q ss_pred             eEeeeeHHHHHHHHHHHhcCCC--CCCceEEecCCcccc
Q 025702          186 VTQLGHVKDLARAFVQVLGNEK--ASRQVFNISGEKYVT  222 (249)
Q Consensus       186 ~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~i~~~~~~s  222 (249)
                      ....+.+++.++.++..+....  ..|+.|+ -++++..
T Consensus       212 ~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~-~~g~p~~  249 (250)
T d1yo6a1         212 KNAALTVEQSTAELISSFNKLDNSHNGRFFM-RNLKPYE  249 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEE-TTEEECC
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCCCCCeEEEC-CCCeeCC
Confidence            0012456888888888887532  2455444 4556554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.16  E-value=2.1e-10  Score=85.75  Aligned_cols=173  Identities=14%  Similarity=0.125  Sum_probs=107.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHH-------HHhhhhCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFV-------KSSLSAKGF   73 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l-------~~~~~~~~~   73 (249)
                      |||+|-||++++++|+++|++|++++|++.+..               .....+.+|..+.+..       ...++..++
T Consensus         8 TGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           8 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            799999999999999999999999999876521               1223344555543322       222222368


Q ss_pred             cEEEecCCCChh---------------------h----hHHHHHhCCCCCeEEEeeccccccCCCCCCCCCCCCCCCCCc
Q 025702           74 DVVYDINGREAD---------------------E----VEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSR  128 (249)
Q Consensus        74 d~Vi~~~~~~~~---------------------~----~~~~~~a~~~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~  128 (249)
                      |++||+||....                     +    .+.++..+++..++|++||...+..           ......
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~-----------~~~~~~  141 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----------TPSMIG  141 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHH
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCC-----------cccccc
Confidence            999999985211                     1    2223333444468999998775421           112234


Q ss_pred             c-cchHHHHHHHhh---------cCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          129 H-KGKLNTESVLES---------KGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       129 ~-~~k~~~e~~~~~---------~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      | .+|...+.+.+.         .++++..+.|+.+-.+.         ........         ....++..+|+++.
T Consensus       142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~---------~~~~~~~~---------~~~~~~~~~~va~~  203 (235)
T d1ooea_         142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---------NRKWMPNA---------DHSSWTPLSFISEH  203 (235)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---------HHHHSTTC---------CGGGCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc---------hhhhCcCC---------ccccCCCHHHHHHH
Confidence            6 999988877532         35678888998875541         11111111         11246778999999


Q ss_pred             HHHHhcCC---CCCCceEEecC
Q 025702          199 FVQVLGNE---KASRQVFNISG  217 (249)
Q Consensus       199 ~~~~~~~~---~~~~~~~~i~~  217 (249)
                      ++..+..+   ...|..+.+.+
T Consensus       204 ~~~~l~~~~~~~~tG~~i~v~~  225 (235)
T d1ooea_         204 LLKWTTETSSRPSSGALLKITT  225 (235)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHHhcCccccCCCceEEEEEe
Confidence            88766543   23566666643

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.11  E-value=1.5e-09  Score=81.65  Aligned_cols=143  Identities=18%  Similarity=0.203  Sum_probs=95.5

Q ss_pred             CCCcccchHHHHHHHHH---cCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-------
Q 025702            1 MGGTRFIGVFLSRLLVK---EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------   70 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-------   70 (249)
                      |||++-||++++++|++   +|++|++.+|++++... +     ..+.....++.++.+|++|+++++++++.       
T Consensus         8 TGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~-~-----~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           8 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-L-----EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-H-----HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             eCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH-H-----HHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            79999999999999975   68999999999776321 1     12222346899999999998887766652       


Q ss_pred             CCCcEEEecCCCChh---------------------h----hHHHHHhCC-------------CCCeEEEeeccccccCC
Q 025702           71 KGFDVVYDINGREAD---------------------E----VEPILDALP-------------NLEQFIYCSSAGVYLKS  112 (249)
Q Consensus        71 ~~~d~Vi~~~~~~~~---------------------~----~~~~~~a~~-------------~~~~~i~~Ss~~v~~~~  112 (249)
                      .++|++||+||....                     +    ++.++..++             +..++|++||....  .
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~--~  159 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS--I  159 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC--S
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc--c
Confidence            369999999885210                     1    111222211             34688999985532  0


Q ss_pred             CCCCCCCCCCCCCCCcc-cchHHHHHHH-------hhcCCcEEEeecceeeCC
Q 025702          113 DLLPHCETDTVDPKSRH-KGKLNTESVL-------ESKGVNWTSLRPVYIYGP  157 (249)
Q Consensus       113 ~~~~~~e~~~~~~~~~~-~~k~~~e~~~-------~~~~~~~~~~r~~~v~g~  157 (249)
                            ...+......| .+|.....+.       .+.+++++.+.||++-.+
T Consensus       160 ------~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         160 ------QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             ------TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             ------CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence                  00111122245 8998766553       356899999999998766

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.09  E-value=2.9e-10  Score=86.69  Aligned_cols=196  Identities=15%  Similarity=0.103  Sum_probs=116.5

Q ss_pred             CCCcc--cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh--------
Q 025702            1 MGGTR--FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA--------   70 (249)
Q Consensus         1 ~G~tG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~--------   70 (249)
                      |||+|  -||.+++++|.++|++|++..|+..+..+...       .....+...+.+|+.+++....+++.        
T Consensus        12 tGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~-------~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1          12 SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT-------DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             CCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH-------TTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             ECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH-------HHcCCceeeEeeecccccccccccchhhhccccC
Confidence            68655  49999999999999999999988765311111       11245678889999998666555432        


Q ss_pred             CCCcEEEecCCCChh--------------h-----------hHHHHHhCC---CCCeEEEeeccccccCCCCCCCCCCCC
Q 025702           71 KGFDVVYDINGREAD--------------E-----------VEPILDALP---NLEQFIYCSSAGVYLKSDLLPHCETDT  122 (249)
Q Consensus        71 ~~~d~Vi~~~~~~~~--------------~-----------~~~~~~a~~---~~~~~i~~Ss~~v~~~~~~~~~~e~~~  122 (249)
                      ...|+++|+++....              .           ......+..   +....|.++|....           ..
T Consensus        85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~-----------~~  153 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-----------RA  153 (268)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-----------SC
T ss_pred             CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc-----------cc
Confidence            147999999885210              0           111111111   22344444443331           11


Q ss_pred             CCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCC-------CCcc----hHHHHHHHHHcCCCeeecCCC
Q 025702          123 VDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPL-------NYNP----VEEWFFHRLKAGRPIPIPGSG  183 (249)
Q Consensus       123 ~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~  183 (249)
                      ......| .+|...+.+.+       ..++++..+.||.+-.+.       ....    ....+.....+..++.     
T Consensus       154 ~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~-----  228 (268)
T d2h7ma1         154 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG-----  228 (268)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC-----
T ss_pred             CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC-----
Confidence            1112235 88888877653       467999999999886541       0111    1111222222222221     


Q ss_pred             cceEeeeeHHHHHHHHHHHhcCC--CCCCceEEecCCcccc
Q 025702          184 IQVTQLGHVKDLARAFVQVLGNE--KASRQVFNISGEKYVT  222 (249)
Q Consensus       184 ~~~~~~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~~~s  222 (249)
                         +.+..++|+|+++.+++...  .-.|+++.+.+|...+
T Consensus       229 ---rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         229 ---WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             ---CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             ---CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence               12445799999999999653  3368899999887543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1e-09  Score=83.62  Aligned_cols=174  Identities=14%  Similarity=0.091  Sum_probs=111.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d~   75 (249)
                      |||++-||+++++.|+++|++|++++|+.+...+...    .........+..+.+|..+.+.....++.     ...|+
T Consensus        20 TGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~   95 (269)
T d1xu9a_          20 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM   95 (269)
T ss_dssp             SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence            7999999999999999999999999998765321100    00112245677888999887766655542     26899


Q ss_pred             EEecCCCChh------------------------hhHHHHHhCC-CCCeEEEeeccccccCCCCCCCCCCCCCCCCCcc-
Q 025702           76 VYDINGREAD------------------------EVEPILDALP-NLEQFIYCSSAGVYLKSDLLPHCETDTVDPKSRH-  129 (249)
Q Consensus        76 Vi~~~~~~~~------------------------~~~~~~~a~~-~~~~~i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-  129 (249)
                      ++++++....                        .++.++..++ +..++|++||...+-           +......| 
T Consensus        96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~-----------~~p~~~~Y~  164 (269)
T d1xu9a_          96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV-----------AYPMVAAYS  164 (269)
T ss_dssp             EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS-----------CCTTCHHHH
T ss_pred             cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcC-----------CCCCchHHH
Confidence            9998876311                        1233343444 457899999877531           11223346 


Q ss_pred             cchHHHHHHHh---------hcCCcEEEeecceeeCCCCCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHH
Q 025702          130 KGKLNTESVLE---------SKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFV  200 (249)
Q Consensus       130 ~~k~~~e~~~~---------~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  200 (249)
                      .+|...+.+.+         ..+++++.+.||.+-.+         +......+.         ........+++|+.++
T Consensus       165 asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~~e~~a~~i~  226 (269)
T d1xu9a_         165 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---------TAMKAVSGI---------VHMQAAPKEECALEII  226 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---------HHHHHSCGG---------GGGGCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc---------HHHHhccCC---------ccccCCCHHHHHHHHH
Confidence            89988776542         24578889999987554         111111111         1123456799999999


Q ss_pred             HHhcCCC
Q 025702          201 QVLGNEK  207 (249)
Q Consensus       201 ~~~~~~~  207 (249)
                      ..+....
T Consensus       227 ~~~~~~~  233 (269)
T d1xu9a_         227 KGGALRQ  233 (269)
T ss_dssp             HHHHTTC
T ss_pred             HHhhcCC
Confidence            8876654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.9e-10  Score=88.00  Aligned_cols=175  Identities=15%  Similarity=0.083  Sum_probs=111.8

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhh-----CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSA-----KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-----~~~d   74 (249)
                      |||++-||.+++++|+++ |++|++.+|+.++..+.     ..++.....++.++.+|++|.++++++++.     -++|
T Consensus         9 TGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           9 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAA-----VQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHH-----HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-----HHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            899999999999999986 89999999997763211     112222346789999999999888776653     2799


Q ss_pred             EEEecCCCChh--------------------h----hHHHHHhCCCCCeEEEeeccccccC-CCCCC-------------
Q 025702           75 VVYDINGREAD--------------------E----VEPILDALPNLEQFIYCSSAGVYLK-SDLLP-------------  116 (249)
Q Consensus        75 ~Vi~~~~~~~~--------------------~----~~~~~~a~~~~~~~i~~Ss~~v~~~-~~~~~-------------  116 (249)
                      ++||+||....                    +    ++.++..+++..++|++||...... ....+             
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~  163 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  163 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccch
Confidence            99999986311                    1    2333444444468999998654210 00000             


Q ss_pred             ----------------CCCCCCCCCCCcc-cchHHHHHHH--------h---hcCCcEEEeecceeeCCCCCcchHHHHH
Q 025702          117 ----------------HCETDTVDPKSRH-KGKLNTESVL--------E---SKGVNWTSLRPVYIYGPLNYNPVEEWFF  168 (249)
Q Consensus       117 ----------------~~e~~~~~~~~~~-~~k~~~e~~~--------~---~~~~~~~~~r~~~v~g~~~~~~~~~~~~  168 (249)
                                      ........+...| .+|.....+.        .   ..++.+..+.||++-.+....       
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~-------  236 (275)
T d1wmaa1         164 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-------  236 (275)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------
T ss_pred             hhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC-------
Confidence                            0001122234446 8887655432        1   137899999999987653100       


Q ss_pred             HHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcC
Q 025702          169 HRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGN  205 (249)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  205 (249)
                                     .   ....++|.|+.+++++..
T Consensus       237 ---------------~---~~~~pee~A~~~~~~a~~  255 (275)
T d1wmaa1         237 ---------------K---ATKSPEEGAETPVYLALL  255 (275)
T ss_dssp             ---------------T---CSBCHHHHTHHHHHHHSC
T ss_pred             ---------------c---ccCCHHHHHHHHHHHHcC
Confidence                           0   112478999988887643

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.93  E-value=1.7e-08  Score=78.94  Aligned_cols=201  Identities=8%  Similarity=-0.026  Sum_probs=109.7

Q ss_pred             CC--CcccchHHHHHHHHHcCCeEEEEecCCCcccc-------CCCCCCchhhhhccCceEEEE----------------
Q 025702            1 MG--GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ-------QLPGESDQEFAEFSSKILHLK----------------   55 (249)
Q Consensus         1 ~G--~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~v~~~~----------------   55 (249)
                      ||  ++.-||+++++.|.++|.+|++..+.......       .+.........+.........                
T Consensus         8 TGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (329)
T d1uh5a_           8 AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETK   87 (329)
T ss_dssp             ECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHHHH
T ss_pred             eCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchhhh
Confidence            57  44579999999999999999998876532100       000000000000001111222                


Q ss_pred             ----eccCCHHHHHHhhhh-----CCCcEEEecCCCChh----------------------hhHHHHHh----CCCCCeE
Q 025702           56 ----GDRKDYDFVKSSLSA-----KGFDVVYDINGREAD----------------------EVEPILDA----LPNLEQF  100 (249)
Q Consensus        56 ----~d~~d~~~l~~~~~~-----~~~d~Vi~~~~~~~~----------------------~~~~~~~a----~~~~~~~  100 (249)
                          +|+.+.+.++.+++.     -+.|++||+++....                      +...+.++    +++..++
T Consensus        88 ~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsI  167 (329)
T d1uh5a_          88 NNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSI  167 (329)
T ss_dssp             TSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccccccc
Confidence                244443333333321     279999999875210                      01112233    3344689


Q ss_pred             EEeeccccccCCCCCCCCCCCCCCCCCcc-cchHHHHHHHh--------hcCCcEEEeecceeeCCC-------------
Q 025702          101 IYCSSAGVYLKSDLLPHCETDTVDPKSRH-KGKLNTESVLE--------SKGVNWTSLRPVYIYGPL-------------  158 (249)
Q Consensus       101 i~~Ss~~v~~~~~~~~~~e~~~~~~~~~~-~~k~~~e~~~~--------~~~~~~~~~r~~~v~g~~-------------  158 (249)
                      |.+||......          -+....+| .+|...+.+.+        ++++++..+.||.+-.+.             
T Consensus       168 v~iss~~~~~~----------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~  237 (329)
T d1uh5a_         168 ISLTYHASQKV----------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEEECGGGTSC----------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred             ccceeehhccc----------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence            99987665211          11223456 78988876652        358999999999874410             


Q ss_pred             -------------------------------CCcchHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHHHHHHhcCC-
Q 025702          159 -------------------------------NYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNE-  206 (249)
Q Consensus       159 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-  206 (249)
                                                     ..............+..++         .-+...+|+|.+++++++.. 
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------~R~~~pedvA~~v~fLaSd~s  308 (329)
T d1uh5a_         238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL---------RQKLLSTDIGSVASFLLSRES  308 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSS---------CSCCCHHHHHHHHHHHHSGGG
T ss_pred             hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCC---------CCCcCHHHHHHHHHHHhCchh
Confidence                                           0001111222222222222         12456899999999998753 


Q ss_pred             -CCCCceEEecCCcc
Q 025702          207 -KASRQVFNISGEKY  220 (249)
Q Consensus       207 -~~~~~~~~i~~~~~  220 (249)
                       ...|+.+.+.+|..
T Consensus       309 ~~iTGq~i~VDGG~~  323 (329)
T d1uh5a_         309 RAITGQTIYVDNGLN  323 (329)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             CCccCCeEEECCCcc
Confidence             34789999988864

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.89  E-value=1.6e-08  Score=77.94  Aligned_cols=84  Identities=7%  Similarity=-0.008  Sum_probs=56.7

Q ss_pred             cccchHHHHHHH--------hhcCCcEEEeecceeeCCCCCc-chHHHHHHHHHcCCCeeecCCCcceEeeeeHHHHHHH
Q 025702          128 RHKGKLNTESVL--------ESKGVNWTSLRPVYIYGPLNYN-PVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARA  198 (249)
Q Consensus       128 ~~~~k~~~e~~~--------~~~~~~~~~~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  198 (249)
                      |+.+|...+.+.        .+.+++++.+.||.+..+.... .....+.....+..++.         .+..++|+|++
T Consensus       192 y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg---------R~~~peevA~~  262 (297)
T d1d7oa_         192 MSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQ---------KTLTADEVGNA  262 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSC---------CCBCHHHHHHH
T ss_pred             eecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCC---------CCCCHHHHHHH
Confidence            337786665543        3468999999999998876433 23334455554444432         23458999999


Q ss_pred             HHHHhcCC--CCCCceEEecCCcc
Q 025702          199 FVQVLGNE--KASRQVFNISGEKY  220 (249)
Q Consensus       199 ~~~~~~~~--~~~~~~~~i~~~~~  220 (249)
                      +++++...  .-.|+.+.+.+|..
T Consensus       263 v~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         263 AAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCchhcCCcCceEEECcCHh
Confidence            99999653  34788999988863

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.83  E-value=3.4e-08  Score=74.36  Aligned_cols=188  Identities=16%  Similarity=0.140  Sum_probs=100.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh----h--CCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS----A--KGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~----~--~~~d   74 (249)
                      |||++-||++++++|+++|++|++++|+..+.                      ..|+.+.+.......    +  ...|
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------------~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------IADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            79999999999999999999999999986542                      235555443332221    1  2699


Q ss_pred             EEEecCCCChh-------------hhHH----HHHhCC--CCCeEEEeeccccccC-CCCCCCC----------------
Q 025702           75 VVYDINGREAD-------------EVEP----ILDALP--NLEQFIYCSSAGVYLK-SDLLPHC----------------  118 (249)
Q Consensus        75 ~Vi~~~~~~~~-------------~~~~----~~~a~~--~~~~~i~~Ss~~v~~~-~~~~~~~----------------  118 (249)
                      .++++++....             ....    .++...  .......+++...... ....+..                
T Consensus        65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~  144 (257)
T d1fjha_          65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehh
Confidence            99999876321             1111    122221  2334444443322110 0000000                


Q ss_pred             CCCCCCCCCcc-cchHHHHHHHh-------hcCCcEEEeecceeeCCCCCcchH-HHHHHHHHcC-CCeeecCCCcceEe
Q 025702          119 ETDTVDPKSRH-KGKLNTESVLE-------SKGVNWTSLRPVYIYGPLNYNPVE-EWFFHRLKAG-RPIPIPGSGIQVTQ  188 (249)
Q Consensus       119 e~~~~~~~~~~-~~k~~~e~~~~-------~~~~~~~~~r~~~v~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~  188 (249)
                      ......+...| .+|...+.+.+       ..++++..+.||.+-.+.....+. ........+. .++         .-
T Consensus       145 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Pl---------gR  215 (257)
T d1fjha_         145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM---------GR  215 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST---------TS
T ss_pred             ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCC---------CC
Confidence            00000111235 88988887653       468999999999987763211110 0111111111 111         12


Q ss_pred             eeeHHHHHHHHHHHhcCC--CCCCceEEecCCc
Q 025702          189 LGHVKDLARAFVQVLGNE--KASRQVFNISGEK  219 (249)
Q Consensus       189 ~i~~~D~a~~~~~~~~~~--~~~~~~~~i~~~~  219 (249)
                      +..++|+|+++.++++..  .-.|+.+.+.+|-
T Consensus       216 ~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         216 RAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CcCHHHHHHHHHHHhCchhCCccCceEEeCCCc
Confidence            456899999999998653  3478899998874

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.60  E-value=1.2e-08  Score=73.48  Aligned_cols=74  Identities=19%  Similarity=0.196  Sum_probs=59.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |||+|.+|+.+++.|+++|++|++++|+.++.....     ..+. ....+.+..+|+.|.+++.+.+.  ++|+|||++
T Consensus        29 tGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~-----~~~~-~~~~~~~~~~d~~~~~~~~~~~~--~iDilin~A  100 (191)
T d1luaa1          29 LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA-----DSVN-KRFKVNVTAAETADDASRAEAVK--GAHFVFTAG  100 (191)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----HHHH-HHHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred             ECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHH-----HHHH-hccchhhhhhhcccHHHHHHHhc--CcCeeeecC
Confidence            799999999999999999999999999976632110     0111 12356678899999999999998  999999998


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      +.
T Consensus       101 g~  102 (191)
T d1luaa1         101 AI  102 (191)
T ss_dssp             CT
T ss_pred             cc
Confidence            85

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.98  E-value=6.7e-06  Score=55.02  Aligned_cols=68  Identities=16%  Similarity=0.158  Sum_probs=54.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+++++.|.+.|++|++++.++.......           ..+...+.+|.++++.+.++ ++  ++|.||-+.+
T Consensus         7 G~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-----------~~~~~~~~gd~~~~~~l~~a~i~--~a~~vi~~~~   73 (134)
T d2hmva1           7 GLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-----------SYATHAVIANATEENELLSLGIR--NFEYVIVAIG   73 (134)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-----------TTCSEEEECCTTCTTHHHHHTGG--GCSEEEECCC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-----------HhCCcceeeecccchhhhccCCc--cccEEEEEcC
Confidence            4589999999999999999999999887643322           24667889999999998876 55  8899887776


Q ss_pred             CC
Q 025702           82 RE   83 (249)
Q Consensus        82 ~~   83 (249)
                      .+
T Consensus        74 ~~   75 (134)
T d2hmva1          74 AN   75 (134)
T ss_dssp             SC
T ss_pred             ch
Confidence            54

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.78  E-value=1.1e-05  Score=53.84  Aligned_cols=68  Identities=19%  Similarity=0.361  Sum_probs=53.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHh-hhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSS-LSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~-~~~~~~d~Vi~~~~   81 (249)
                      |.|.+|+.+++.|.+.|++|++++++++.....         .. ..++.++.+|.+|++.++++ ++  .++.++.+..
T Consensus         7 G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---------~~-~~~~~vi~Gd~~~~~~l~~~~i~--~a~~vv~~t~   74 (132)
T d1lssa_           7 GIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKA---------SA-EIDALVINGDCTKIKTLEDAGIE--DADMYIAVTG   74 (132)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HH-HCSSEEEESCTTSHHHHHHTTTT--TCSEEEECCS
T ss_pred             CCCHHHHHHHHHHHHCCCCcceecCChhhhhhh---------hh-hhhhhhccCcccchhhhhhcChh--hhhhhcccCC
Confidence            459999999999999999999999987653211         10 12678899999999999877 44  8999998766


Q ss_pred             C
Q 025702           82 R   82 (249)
Q Consensus        82 ~   82 (249)
                      .
T Consensus        75 ~   75 (132)
T d1lssa_          75 K   75 (132)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=0.00017  Score=46.03  Aligned_cols=66  Identities=12%  Similarity=-0.024  Sum_probs=53.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|.+|+.++.+..+.|+++++++.+++......             .-+++.+|+.|.+.+.++....++|+|..-..
T Consensus        18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------------a~~~i~~~~~d~~~l~~~~~~~~~DviT~E~E   83 (111)
T d1kjqa2          18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPHYIVPEIE   83 (111)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCSEEEECSS
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------------CCeEEECCCCCHHHHHHHHHhhCCceEEEEec
Confidence            5799999999999999999999999877644322             23567899999999999887668899975444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=0.00019  Score=48.28  Aligned_cols=87  Identities=20%  Similarity=0.248  Sum_probs=48.5

Q ss_pred             CCCcccchHHHHHHHHHcC----CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||||++|+.+++.|+++.    .+++.+.++.........           ..-.....+..+.+.    ++  ++|++
T Consensus         7 vGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~-----------~~~~~~~~~~~~~~~----~~--~~Div   69 (146)
T d1t4ba1           7 IGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSF-----------GGTTGTLQDAFDLEA----LK--ALDII   69 (146)
T ss_dssp             ESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGG-----------GTCCCBCEETTCHHH----HH--TCSEE
T ss_pred             ECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccc-----------cCCceeeecccchhh----hh--cCcEE
Confidence            5999999999999988863    366666655443211000           011111223334333    34  89999


Q ss_pred             EecCCCChhhhHHHHHhCC--CCC-eEEEeecc
Q 025702           77 YDINGREADEVEPILDALP--NLE-QFIYCSSA  106 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~--~~~-~~i~~Ss~  106 (249)
                      |.+++.  .....+...+.  +++ .+|=.||.
T Consensus        70 F~a~~~--~~s~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          70 VTCQGG--DYTNEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             EEecCc--hHHHHhhHHHHhcCCCeecccCCcc
Confidence            999874  44555555543  332 34444443

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.39  E-value=0.00031  Score=49.16  Aligned_cols=98  Identities=14%  Similarity=0.258  Sum_probs=65.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||+|-+|...++.....|.+|+++++++++...         ....+....+...|-...+.+.+.....++|+||++.
T Consensus        36 ~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~---------~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~v  106 (182)
T d1v3va2          36 SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY---------LKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV  106 (182)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------HHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             EeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH---------HHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEec
Confidence            5899999999999999999999999998765211         1111112222222333344555555556899999999


Q ss_pred             CCChhhhHHHHHhCCCCCeEEEeeccccc
Q 025702           81 GREADEVEPILDALPNLEQFIYCSSAGVY  109 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~~~~~~i~~Ss~~v~  109 (249)
                      |  .......++.++.-.+++.++....+
T Consensus       107 G--~~~~~~~~~~l~~~G~~v~~G~~~~~  133 (182)
T d1v3va2         107 G--GEFLNTVLSQMKDFGKIAICGAISVY  133 (182)
T ss_dssp             C--HHHHHHHGGGEEEEEEEEECCCGGGT
T ss_pred             C--chhhhhhhhhccCCCeEEeecceeec
Confidence            8  35667778888744678877765554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.31  E-value=0.00016  Score=50.37  Aligned_cols=69  Identities=17%  Similarity=0.185  Sum_probs=50.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|.+|+++++.|.++||+|++++|+..........         .+.......+..+.......+.  ..|.++.+...
T Consensus         9 GaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~---------~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~~~   77 (182)
T d1e5qa1           9 GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---------VQHSTPISLDVNDDAALDAEVA--KHDLVISLIPY   77 (182)
T ss_dssp             CCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTCHHHHHHHHT--TSSEEEECSCG
T ss_pred             CCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc---------ccccccccccccchhhhHhhhh--ccceeEeeccc
Confidence            459999999999999999999999998874321111         2344555566667777777777  78888876653

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.12  E-value=0.00021  Score=48.03  Aligned_cols=87  Identities=15%  Similarity=0.102  Sum_probs=47.8

Q ss_pred             CCCcccchHHHHHHHHHcCC---eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH---QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi   77 (249)
                      +||||++|+.+++.|.+++|   ++..+..+.+.-. ...          ...-+....++.+     ..+.  ++|++|
T Consensus         8 vGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk-~i~----------~~~~~~~~~~~~~-----~~~~--~~d~vf   69 (144)
T d2hjsa1           8 VGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ-RMG----------FAESSLRVGDVDS-----FDFS--SVGLAF   69 (144)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC-EEE----------ETTEEEECEEGGG-----CCGG--GCSEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCc-cee----------eccccchhccchh-----hhhc--cceEEE
Confidence            49999999999999987653   6666654433211 000          0011111112211     2233  889999


Q ss_pred             ecCCCChhhhHHHHHhCC-CCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDALP-NLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss~~  107 (249)
                      .+.+.  .....+...+. ...++|-.|+..
T Consensus        70 ~a~p~--~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          70 FAAAA--EVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             ECSCH--HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ecCCc--chhhhhccccccCCceEEeechhh
Confidence            87763  44444444433 445777777544

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.92  E-value=0.0018  Score=43.33  Aligned_cols=88  Identities=20%  Similarity=0.276  Sum_probs=48.9

Q ss_pred             CCCcccchHHHHHHHHHcC----CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG----HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +||||++|+.+++.|+++.    .++..++.+.....  .+..        .... ....+..+.+.    ++  ++|+|
T Consensus         6 iGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk--~~~~--------~~~~-~~~~~~~~~~~----~~--~~Dvv   68 (147)
T d1mb4a1           6 VGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP--APNF--------GKDA-GMLHDAFDIES----LK--QLDAV   68 (147)
T ss_dssp             ESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB--CCCS--------SSCC-CBCEETTCHHH----HT--TCSEE
T ss_pred             ECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc--cccc--------CCcc-eeeecccchhh----hc--cccEE
Confidence            5999999999999998754    35555554433211  1110        0111 11112233332    34  89999


Q ss_pred             EecCCCChhhhHHHHHhCC--CCC-eEEEeeccc
Q 025702           77 YDINGREADEVEPILDALP--NLE-QFIYCSSAG  107 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~--~~~-~~i~~Ss~~  107 (249)
                      |.+.+.  .....+...+.  +.+ .+|=.|+..
T Consensus        69 F~alp~--~~s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          69 ITCQGG--SYTEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             EECSCH--HHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             EEecCc--hHHHHHhHHHHHcCCceEEEeCCccc
Confidence            998874  44555555543  332 577667544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.91  E-value=0.0012  Score=44.60  Aligned_cols=86  Identities=12%  Similarity=0.211  Sum_probs=50.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH-HHHHHhhhhC-CCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAK-GFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~-~~l~~~~~~~-~~d~Vi~   78 (249)
                      +||.|.+|+.+++.|.++||+|.+.+|++.........         .....+....+... +.+.++.... .-.++++
T Consensus        15 IGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD   85 (152)
T d2pv7a2          15 VGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA---------NADVVIVSVPINLTLETIERLKPYLTENMLLAD   85 (152)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT---------TCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred             EcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh---------hccccccccchhhheeeeecccccccCCceEEE
Confidence            47799999999999999999999999987663221110         12333333333322 2222333221 3357778


Q ss_pred             cCCCChhhhHHHHHhCC
Q 025702           79 INGREADEVEPILDALP   95 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~   95 (249)
                      +++......+.+.+.+.
T Consensus        86 ~~Svk~~~~~~~~~~~~  102 (152)
T d2pv7a2          86 LTSVKREPLAKMLEVHT  102 (152)
T ss_dssp             CCSCCHHHHHHHHHHCS
T ss_pred             ecccCHHHHHHHHHHcc
Confidence            87765555555544443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.84  E-value=0.00056  Score=47.31  Aligned_cols=87  Identities=16%  Similarity=0.188  Sum_probs=56.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||+|-+|...++.+...|.+|+++++++++...         ..+  -+...+ .|..+..  .+.-...++|+||++.
T Consensus        34 ~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~---------~~~--lGa~~~-i~~~~~~--~~~~~~~g~D~v~d~~   99 (171)
T d1iz0a2          34 QAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL---------PLA--LGAEEA-ATYAEVP--ERAKAWGGLDLVLEVR   99 (171)
T ss_dssp             SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH---------HHH--TTCSEE-EEGGGHH--HHHHHTTSEEEEEECS
T ss_pred             Eeccccchhhhhhhhccccccccccccccccccc---------ccc--ccccee-eehhhhh--hhhhcccccccccccc
Confidence            5889999999999999999999999988655211         111  122222 2444322  2222334899999998


Q ss_pred             CCChhhhHHHHHhCCCCCeEEEee
Q 025702           81 GREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      |.   .....++.++...+++.++
T Consensus       100 G~---~~~~~~~~l~~~G~~v~~G  120 (171)
T d1iz0a2         100 GK---EVEESLGLLAHGGRLVYIG  120 (171)
T ss_dssp             CT---THHHHHTTEEEEEEEEEC-
T ss_pred             ch---hHHHHHHHHhcCCcEEEEe
Confidence            83   3455666666446788765

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.83  E-value=0.00062  Score=47.52  Aligned_cols=93  Identities=16%  Similarity=0.146  Sum_probs=62.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH---HHHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY---DFVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~---~~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|...++.+...|.+|+++++++++.. .+.        +  .+...+ .|..++   +.+.+.....++|+||
T Consensus        32 ~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~-~l~--------~--~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~   99 (183)
T d1pqwa_          32 HSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLS--------R--LGVEYV-GDSRSVDFADEILELTDGYGVDVVL   99 (183)
T ss_dssp             TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHH--------T--TCCSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             ECCCCCcccccchhhccccccceeeeccccccc-ccc--------c--cccccc-ccCCccCHHHHHHHHhCCCCEEEEE
Confidence            589999999999999999999999998765421 111        1  222222 344554   3444444445899999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      ++.+.  ......++.++...++|.++...
T Consensus       100 d~~g~--~~~~~~~~~l~~~G~~v~~G~~~  127 (183)
T d1pqwa_         100 NSLAG--EAIQRGVQILAPGGRFIELGKKD  127 (183)
T ss_dssp             ECCCT--HHHHHHHHTEEEEEEEEECSCGG
T ss_pred             ecccc--hHHHHHHHHhcCCCEEEEEccCC
Confidence            99984  45666777777446888876433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.80  E-value=0.00017  Score=50.94  Aligned_cols=31  Identities=29%  Similarity=0.418  Sum_probs=28.7

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      +||+|.+|++|++.|.++||+|.+.+|++++
T Consensus         6 igGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           6 LGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4888999999999999999999999998765

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.0013  Score=44.50  Aligned_cols=73  Identities=15%  Similarity=0.213  Sum_probs=54.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|-+|+.+++.|.+.|++|+++..++........       .....++.++.+|.+|++.++++-- ..++.||-+...
T Consensus        10 G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~-------~~~~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi~~~~~   81 (153)
T d1id1a_          10 GHSILAINTILQLNQRGQNVTVISNLPEDDIKQLE-------QRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALSDN   81 (153)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-------HHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECSSC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHH-------HhhcCCcEEEEccCcchHHHHHhcc-ccCCEEEEcccc
Confidence            55889999999999999999999988754211000       0113579999999999998865433 279999988775


Q ss_pred             C
Q 025702           83 E   83 (249)
Q Consensus        83 ~   83 (249)
                      .
T Consensus        82 d   82 (153)
T d1id1a_          82 D   82 (153)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.67  E-value=0.00087  Score=46.52  Aligned_cols=93  Identities=19%  Similarity=0.169  Sum_probs=60.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC-HHHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD-YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d-~~~l~~~~~~~~~d~Vi~~   79 (249)
                      .||+|-+|+..++.....|.+|++.++++.+....         ...+.. .++  |..+ .++........++|+||++
T Consensus        38 ~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~---------~~lGa~-~vi--~~~~~~~~~~~~~~~~gvD~vid~  105 (176)
T d1xa0a2          38 TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL---------RVLGAK-EVL--AREDVMAERIRPLDKQRWAAAVDP  105 (176)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH---------HHTTCS-EEE--ECC---------CCSCCEEEEEEC
T ss_pred             EeccchHHHHHHHHHHHcCCceEEecCchHHHHHH---------Hhcccc-eee--ecchhHHHHHHHhhccCcCEEEEc
Confidence            58999999999999999999999999988774211         111122 222  3322 1222334445689999999


Q ss_pred             CCCChhhhHHHHHhCCCCCeEEEeeccc
Q 025702           80 NGREADEVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      .+.  ......++.++...|++.++...
T Consensus       106 vgg--~~~~~~l~~l~~~Griv~~G~~~  131 (176)
T d1xa0a2         106 VGG--RTLATVLSRMRYGGAVAVSGLTG  131 (176)
T ss_dssp             STT--TTHHHHHHTEEEEEEEEECSCCS
T ss_pred             CCc--hhHHHHHHHhCCCceEEEeeccc
Confidence            884  45777788887556888777543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.62  E-value=0.0013  Score=44.88  Aligned_cols=29  Identities=24%  Similarity=0.378  Sum_probs=26.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.+++.|+++||+|++.+|++..
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~   35 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEA   35 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcch
Confidence            57999999999999999999999998766

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.60  E-value=0.00098  Score=46.27  Aligned_cols=93  Identities=15%  Similarity=0.085  Sum_probs=56.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|..+++.|+++||+|++.+|++++........        .....  .......+.+...+.  .+|.++-+...
T Consensus         9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~--------~~~~~--~~~a~~~~~~~~~~~--~~~~ii~~~~~   76 (176)
T d2pgda2           9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANE--------AKGTK--VLGAHSLEEMVSKLK--KPRRIILLVKA   76 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTT--------TTTSS--CEECSSHHHHHHHBC--SSCEEEECSCT
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhc--------ccccc--ccchhhhhhhhhhhc--ccceEEEecCc
Confidence            5699999999999999999999999987632211100        00000  001235566666666  88888877654


Q ss_pred             Chh---hhHHHHHhCCCCCeEEEeeccc
Q 025702           83 EAD---EVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        83 ~~~---~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      ...   ....++..++..+-+|-+||..
T Consensus        77 ~~~v~~v~~~l~~~~~~g~iiid~sT~~  104 (176)
T d2pgda2          77 GQAVDNFIEKLVPLLDIGDIIIDGGNSE  104 (176)
T ss_dssp             THHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred             hHHHHHHHHHHHhccccCcEEEecCcch
Confidence            321   2333445555445677666544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0014  Score=45.37  Aligned_cols=90  Identities=11%  Similarity=0.137  Sum_probs=60.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|...++.+...|.+|+++++++++... .        .+  -+... ..|.++.+   .+.+.....++|+||
T Consensus        35 ~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~-~--------~~--~Ga~~-vi~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          35 HGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-V--------LQ--NGAHE-VFNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-H--------HH--TTCSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             EeccccccccccccccccCccccccccccccccc-c--------cc--cCccc-ccccccccHHHHhhhhhccCCceEEe
Confidence            4889999999999999999999999987654211 0        11  12221 23565544   333444445799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      ++.+.  ......++.++...+++.++
T Consensus       103 d~~g~--~~~~~~~~~l~~~G~iv~~G  127 (174)
T d1yb5a2         103 EMLAN--VNLSKDLSLLSHGGRVIVVG  127 (174)
T ss_dssp             ESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred             ecccH--HHHHHHHhccCCCCEEEEEe
Confidence            99883  45666777777446888775

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.51  E-value=0.0023  Score=43.66  Aligned_cols=99  Identities=10%  Similarity=0.044  Sum_probs=57.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCC--chhhhhccCceEEEEeccCCHHHHHHhhhh-------C-C
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES--DQEFAEFSSKILHLKGDRKDYDFVKSSLSA-------K-G   72 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~-------~-~   72 (249)
                      |.|.+|+.+++.|+++||+|.+.+|++...........  .....+......++..-+.+....+.++..       . .
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~~~l~~   87 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP   87 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHHHHSCT
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccccccCCC
Confidence            67999999999999999999999998766322111000  001111123334444444454444444321       1 2


Q ss_pred             CcEEEecCCCChhhhHHHHHhCC-CCCeEE
Q 025702           73 FDVVYDINGREADEVEPILDALP-NLEQFI  101 (249)
Q Consensus        73 ~d~Vi~~~~~~~~~~~~~~~a~~-~~~~~i  101 (249)
                      =++|+++..........+.+.++ ..-+|+
T Consensus        88 g~iiid~st~~p~~~~~~~~~~~~~gi~~~  117 (162)
T d3cuma2          88 GTLVLECSTIAPTSARKIHAAARERGLAML  117 (162)
T ss_dssp             TCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHHCCCcEE
Confidence            35777777777777777766665 333554

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.36  E-value=0.00091  Score=46.55  Aligned_cols=86  Identities=12%  Similarity=0.018  Sum_probs=48.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|.+|..++..|.++||+|.+++|++...........   .....+..............+.+.++  ++|+||-+.. 
T Consensus         8 GaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e~~~--~aD~iii~v~-   81 (184)
T d1bg6a2           8 GLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGA---IIAEGPGLAGTAHPDLLTSDIGLAVK--DADVILIVVP-   81 (184)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTS---EEEESSSCCEEECCSEEESCHHHHHT--TCSEEEECSC-
T ss_pred             CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC---CchhhhhhhhhhhhhhhhhhhHhHhc--CCCEEEEEEc-
Confidence            45999999999999999999999998654221100000   00000111111111111223456666  8999998754 


Q ss_pred             ChhhhHHHHHhCC
Q 025702           83 EADEVEPILDALP   95 (249)
Q Consensus        83 ~~~~~~~~~~a~~   95 (249)
                       ......+++.++
T Consensus        82 -~~~~~~~~~~i~   93 (184)
T d1bg6a2          82 -AIHHASIAANIA   93 (184)
T ss_dssp             -GGGHHHHHHHHG
T ss_pred             -hhHHHHHHHHhh
Confidence             345566666544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.32  E-value=0.0016  Score=43.50  Aligned_cols=71  Identities=25%  Similarity=0.295  Sum_probs=41.8

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +||+|.+|++++..|..+|.  ++..++.++.+...       .++... ........-+ ......+.++  ++|+|+.
T Consensus         6 iGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-------~Dl~~~-~~~~~~~~~~-~~~~~~~~~~--~aDivVi   74 (144)
T d1mlda1           6 LGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-------ADLSHI-ETRATVKGYL-GPEQLPDCLK--GCDVVVI   74 (144)
T ss_dssp             ETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-------HHHTTS-SSSCEEEEEE-SGGGHHHHHT--TCSEEEE
T ss_pred             ECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-------HHHhhh-hhhcCCCeEE-cCCChHHHhC--CCCEEEE
Confidence            48899999999999998874  78888865433110       011100 0111111111 2333445565  9999999


Q ss_pred             cCCC
Q 025702           79 INGR   82 (249)
Q Consensus        79 ~~~~   82 (249)
                      ++|.
T Consensus        75 tag~   78 (144)
T d1mlda1          75 PAGV   78 (144)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            9885

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.19  E-value=0.0077  Score=43.23  Aligned_cols=64  Identities=11%  Similarity=0.065  Sum_probs=45.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcEEEecC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      .||.+|.+|++++..+|++|+.++.......              ..++..+...-.+  .+.+.+.+.  .+|++|++|
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~~~~~t~~~m~~~~~~~~~--~~D~~i~aA   93 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------PPFVKRVDVMTALEMEAAVNASVQ--QQNIFIGCA   93 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------CTTEEEEECCSHHHHHHHHHHHGG--GCSEEEECC
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------ccccccceehhhHHHHHHHHhhhc--cceeEeeee
Confidence            6899999999999999999999998765421              2456665443221  123334444  899999998


Q ss_pred             CC
Q 025702           81 GR   82 (249)
Q Consensus        81 ~~   82 (249)
                      +.
T Consensus        94 Av   95 (223)
T d1u7za_          94 AV   95 (223)
T ss_dssp             BC
T ss_pred             ch
Confidence            75

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.13  E-value=0.00081  Score=46.12  Aligned_cols=29  Identities=28%  Similarity=0.405  Sum_probs=26.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.+++.|.++||+|++++|++..
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~   35 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQST   35 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            56999999999999999999999998654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.05  E-value=0.0065  Score=41.90  Aligned_cols=91  Identities=18%  Similarity=0.145  Sum_probs=60.6

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~Vi   77 (249)
                      +||+|-+|...++.+...|.+|+++++++.+....         .+.  +... ..|..+++   .+.++-...++|+|+
T Consensus        35 ~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~---------~~l--Ga~~-vi~~~~~d~~~~v~~~t~g~g~d~v~  102 (179)
T d1qora2          35 HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA---------LKA--GAWQ-VINYREEDLVERLKEITGGKKVRVVY  102 (179)
T ss_dssp             SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH---------HHH--TCSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             EccccccchHHHHHHHHhCCeEeecccchHHHHHH---------Hhc--CCeE-EEECCCCCHHHHHHHHhCCCCeEEEE
Confidence            58999999999999999999999999998763211         111  2222 23555543   444444455799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      ++.+.  ......++.++...+++..+.
T Consensus       103 d~~g~--~~~~~~~~~l~~~G~~v~~g~  128 (179)
T d1qora2         103 DSVGR--DTWERSLDCLQRRGLMVSFGN  128 (179)
T ss_dssp             ECSCG--GGHHHHHHTEEEEEEEEECCC
T ss_pred             eCccH--HHHHHHHHHHhcCCeeeeccc
Confidence            99874  455666777664446766553

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.02  E-value=0.0017  Score=43.89  Aligned_cols=20  Identities=20%  Similarity=0.370  Sum_probs=17.9

Q ss_pred             CCCcccchHHHHHHHHHcCC
Q 025702            1 MGGTRFIGVFLSRLLVKEGH   20 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~   20 (249)
                      +||||++|+.|++.|.++.+
T Consensus         7 vGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           7 VGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             ETTTSHHHHHHHHHHHTCCS
T ss_pred             ECCCcHHHHHHHHHHHcCCC
Confidence            59999999999999988864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.97  E-value=0.025  Score=36.57  Aligned_cols=88  Identities=10%  Similarity=0.168  Sum_probs=55.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh---hCCCcEEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~---~~~~d~Vi   77 (249)
                      .|++|-.|+.|.+.+.+.|+++.+.......  ..+.          ..+   +..|++.++.+.+.++   +.+.-.|+
T Consensus         6 ~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--~~~~----------~~D---VvIDFS~p~~~~~~l~~~~~~~~p~Vi   70 (128)
T d1vm6a3           6 VGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--EELD----------SPD---VVIDFSSPEALPKTVDLCKKYRAGLVL   70 (128)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--EECS----------CCS---EEEECSCGGGHHHHHHHHHHHTCEEEE
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEECCCcH--HHhc----------cCC---EEEEecCHHHHHHHHHHHHhcCCCEEE
Confidence            4899999999999999999987765432211  1111          122   3558887766655553   34777888


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      -+.|........+-+++++. ++++.+
T Consensus        71 GTTG~~~~~~~~i~~~ak~~-pv~~a~   96 (128)
T d1vm6a3          71 GTTALKEEHLQMLRELSKEV-PVVQAY   96 (128)
T ss_dssp             CCCSCCHHHHHHHHHHTTTS-EEEECS
T ss_pred             EcCCCCHHHHHHHHHHHhhC-CEEeee
Confidence            88887666655555555533 555443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.92  E-value=0.0092  Score=40.41  Aligned_cols=30  Identities=30%  Similarity=0.451  Sum_probs=27.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |.|.+|+.++..|.+.|++|.+++|++...
T Consensus         7 GaG~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           7 GCGALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CcCHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            349999999999999999999999998764

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.85  E-value=0.01  Score=40.46  Aligned_cols=92  Identities=10%  Similarity=0.080  Sum_probs=58.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEe-ccCCHHHHHHhhh---hCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG-DRKDYDFVKSSLS---AKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-d~~d~~~l~~~~~---~~~~d~Vi~   78 (249)
                      |+|.+|...+..+...|.+|+++++++.+....         .+......++.- .-.+...+.+.+.   ..++|+||.
T Consensus        34 G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a---------~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid  104 (170)
T d1e3ja2          34 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA---------KNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID  104 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred             cccccchhhHhhHhhhcccccccchHHHHHHHH---------HHcCCcEEEeccccccccchhhhhhhcccccCCceeee
Confidence            468899999998888899999999987763210         111122222221 1223344434333   247999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           79 INGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      +.+. .......++.++...+++.++
T Consensus       105 ~~g~-~~~~~~a~~~~~~~G~iv~~G  129 (170)
T d1e3ja2         105 CSGN-EKCITIGINITRTGGTLMLVG  129 (170)
T ss_dssp             CSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred             cCCC-hHHHHHHHHHHhcCCceEEEe
Confidence            9985 334566778888556888776

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.79  E-value=0.021  Score=39.40  Aligned_cols=80  Identities=18%  Similarity=0.099  Sum_probs=54.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|..-|.+|++.+|.+.....                        .-.+.++++++  .+|+|+.+...
T Consensus        49 G~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~------------------------~~~~~l~ell~--~sDiv~~~~pl  102 (181)
T d1qp8a1          49 GLGEIGTRVGKILAALGAQVRGFSRTPKEGPW------------------------RFTNSLEEALR--EARAAVCALPL  102 (181)
T ss_dssp             SCSTHHHHHHHHHHHTTCEEEEECSSCCCSSS------------------------CCBSCSHHHHT--TCSEEEECCCC
T ss_pred             ccccccccceeeeeccccccccccccccccce------------------------eeeechhhhhh--ccchhhccccc
Confidence            56889999999999999999999987654210                        00123567777  89999977665


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +..    --...++.++...-||.+|-..+
T Consensus       103 ~~~t~~li~~~~l~~mk~~ailIN~~RG~i  132 (181)
T d1qp8a1         103 NKHTRGLVKYQHLALMAEDAVFVNVGRAEV  132 (181)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             ccccccccccceeeeccccceEEecccccc
Confidence            322    13445666665567887775554

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.57  E-value=0.0022  Score=43.21  Aligned_cols=82  Identities=11%  Similarity=0.012  Sum_probs=49.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|+++|++|++.++.+.+.....           ..++.+. .      ...++++  .+|+||-+...
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~-----------~~~~~~~-~------~~~e~~~--~~diIi~~v~~   66 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER-----------ARTVGVT-E------TSEEDVY--SCPVVISAVTP   66 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH-----------HHHHTCE-E------CCHHHHH--TSSEEEECSCG
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh-----------hhccccc-c------cHHHHHh--hcCeEEEEecC
Confidence            6799999999999999999999888776532111           0112111 1      1234455  89999988664


Q ss_pred             ChhhhHHHHHh-CC-CCCeEEEeecc
Q 025702           83 EADEVEPILDA-LP-NLEQFIYCSSA  106 (249)
Q Consensus        83 ~~~~~~~~~~a-~~-~~~~~i~~Ss~  106 (249)
                        .....++.. .. ..+.+|-+||.
T Consensus        67 --~~~~~~~~~~~~~~~~~~id~st~   90 (152)
T d1i36a2          67 --GVALGAARRAGRHVRGIYVDINNI   90 (152)
T ss_dssp             --GGHHHHHHHHHTTCCSEEEECSCC
T ss_pred             --chHHHHHHhhcccCCceeeccCcC
Confidence              233333333 22 23455555543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.49  E-value=0.016  Score=39.94  Aligned_cols=94  Identities=16%  Similarity=0.144  Sum_probs=54.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc-ccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI-AQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|..|++++..|.+.|++|++..|..+.. ...+...-.  ..  .-.......++.-.+.+.++++  ++|+|+.+..
T Consensus         7 GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~--~~--~~~~~~~~~~i~~~~~~~~~~~--~ad~Ii~avp   80 (180)
T d1txga2           7 GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGRE--HP--RLGVKLNGVEIFWPEQLEKCLE--NAEVVLLGVS   80 (180)
T ss_dssp             SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCC--BT--TTTBCCCSEEEECGGGHHHHHT--TCSEEEECSC
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhh--hh--hhcchhccccccccccHHHHHh--ccchhhcccc
Confidence            569999999999999999999999854431 000000000  00  0001001112223455667777  8999998765


Q ss_pred             CChhhhHHHHHhCC---CCCeEEEee
Q 025702           82 READEVEPILDALP---NLEQFIYCS  104 (249)
Q Consensus        82 ~~~~~~~~~~~a~~---~~~~~i~~S  104 (249)
                        ....+.+++.+.   +...+|.++
T Consensus        81 --s~~~~~~~~~l~~~l~~~~ii~~t  104 (180)
T d1txga2          81 --TDGVLPVMSRILPYLKDQYIVLIS  104 (180)
T ss_dssp             --GGGHHHHHHHHTTTCCSCEEEECC
T ss_pred             --hhhhHHHHHhhccccccceecccc
Confidence              466677777654   334555444

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.47  E-value=0.0027  Score=44.00  Aligned_cols=91  Identities=18%  Similarity=0.149  Sum_probs=60.4

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||+|-+|+..++.....|.+|++++|++.+....         .  .-+...+ .|..+.+ ..+.+.....|.++++.
T Consensus        38 ~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~---------~--~lGad~v-i~~~~~~-~~~~l~~~~~~~vvD~V  104 (177)
T d1o89a2          38 TGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL---------K--SLGASRV-LPRDEFA-ESRPLEKQVWAGAIDTV  104 (177)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH---------H--HHTEEEE-EEGGGSS-SCCSSCCCCEEEEEESS
T ss_pred             EEccccchHHHHHHHHHcCCCeEEEecchhHHHHH---------H--hhccccc-cccccHH-HHHHHHhhcCCeeEEEc
Confidence            58999999999999999999999999988773211         1  1133322 2333322 22344445789999988


Q ss_pred             CCChhhhHHHHHhCCCCCeEEEeecc
Q 025702           81 GREADEVEPILDALPNLEQFIYCSSA  106 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~~~~~~i~~Ss~  106 (249)
                      +.  ......++.++...+++.++..
T Consensus       105 gg--~~~~~~l~~l~~~Griv~~G~~  128 (177)
T d1o89a2         105 GD--KVLAKVLAQMNYGGCVAACGLA  128 (177)
T ss_dssp             CH--HHHHHHHHTEEEEEEEEECCCT
T ss_pred             ch--HHHHHHHHHhccccceEeeccc
Confidence            73  4466677777745588877643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.32  E-value=0.0044  Score=41.69  Aligned_cols=78  Identities=12%  Similarity=0.058  Sum_probs=50.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|.+|+++++.|++.|+++++..|++++.... .       .+  -++...    .+   ..++++  ++|+||-+.. 
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l-~-------~~--~g~~~~----~~---~~~~~~--~~dvIilavk-   66 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEI-A-------EQ--LALPYA----MS---HQDLID--QVDLVILGIK-   66 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHH-H-------HH--HTCCBC----SS---HHHHHH--TCSEEEECSC-
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhh-c-------cc--cceeee----ch---hhhhhh--ccceeeeecc-
Confidence            679999999999999999999999886653211 0       00  122111    12   344555  8999997664 


Q ss_pred             ChhhhHHHHHhCCCCCeEE
Q 025702           83 EADEVEPILDALPNLEQFI  101 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i  101 (249)
                       .+....+++.++..+.+|
T Consensus        67 -p~~~~~vl~~l~~~~~ii   84 (152)
T d2ahra2          67 -PQLFETVLKPLHFKQPII   84 (152)
T ss_dssp             -GGGHHHHHTTSCCCSCEE
T ss_pred             -hHhHHHHhhhcccceeEe
Confidence             355667777666433444

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.30  E-value=0.0042  Score=42.50  Aligned_cols=91  Identities=18%  Similarity=0.172  Sum_probs=57.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCH-HHHHHhhhhCCCcEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY-DFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~-~~l~~~~~~~~~d~Vi~~   79 (249)
                      +||+|-+|...++.....|.+|+++++++++...         ....  +...+ .|..+. ..........++|+|+++
T Consensus        30 ~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~---------~~~l--Gad~v-i~~~~~~~~~~~~~~~~gvd~vid~   97 (167)
T d1tt7a2          30 TGATGGVGGIAVSMLNKRGYDVVASTGNREAADY---------LKQL--GASEV-ISREDVYDGTLKALSKQQWQGAVDP   97 (167)
T ss_dssp             ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH---------HHHH--TCSEE-EEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred             eCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH---------HHhh--cccce-EeccchhchhhhcccCCCceEEEec
Confidence            4899999999999998899999999999877321         1111  22222 122211 011111223479999999


Q ss_pred             CCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           80 NGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      .+-  ......++.++...+++.++.
T Consensus        98 vgg--~~~~~~~~~l~~~G~iv~~G~  121 (167)
T d1tt7a2          98 VGG--KQLASLLSKIQYGGSVAVSGL  121 (167)
T ss_dssp             CCT--HHHHHHHTTEEEEEEEEECCC
T ss_pred             CcH--HHHHHHHHHhccCceEEEeec
Confidence            873  455667777774457776654

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.28  E-value=0.0062  Score=42.32  Aligned_cols=26  Identities=23%  Similarity=0.544  Sum_probs=21.8

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFT   26 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~   26 (249)
                      +||||++|+.|++.|.++. .++..+.
T Consensus        11 lGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1          11 LGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             ESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             ECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            5999999999999999985 4666555

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.20  E-value=0.0065  Score=42.35  Aligned_cols=94  Identities=13%  Similarity=0.156  Sum_probs=54.0

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEE-EecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTL-FTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~V   76 (249)
                      +||+|-+|+..++.....|.++++ .++++++....         .. ..+.. ...|..+   .+.+++.. ..++|+|
T Consensus        37 ~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l---------~~-~~gad-~vi~~~~~~~~~~~~~~~-~~GvDvv  104 (187)
T d1vj1a2          37 SGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFL---------TS-ELGFD-AAVNYKTGNVAEQLREAC-PGGVDVY  104 (187)
T ss_dssp             SSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHH---------HH-HSCCS-EEEETTSSCHHHHHHHHC-TTCEEEE
T ss_pred             ECCCchhhHHHHHHHHHcCCcceecccchHHHHhhh---------hh-cccce-EEeeccchhHHHHHHHHh-ccCceEE
Confidence            589999999999999888976554 45543332110         00 11222 1224443   23333433 3589999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEeecccc
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      |++.+.  ......++.++...+++.++..+-
T Consensus       105 ~D~vGg--~~~~~~~~~l~~~G~iv~~G~~s~  134 (187)
T d1vj1a2         105 FDNVGG--DISNTVISQMNENSHIILCGQISQ  134 (187)
T ss_dssp             EESSCH--HHHHHHHTTEEEEEEEEEC-----
T ss_pred             EecCCc--hhHHHHhhhccccccEEEeccccc
Confidence            999983  456666777775568887765544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.14  E-value=0.00079  Score=47.48  Aligned_cols=103  Identities=15%  Similarity=0.194  Sum_probs=59.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhcc-Cce-----------EEEEeccCCHHHHHHhhhh
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFS-SKI-----------LHLKGDRKDYDFVKSSLSA   70 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~v-----------~~~~~d~~d~~~l~~~~~~   70 (249)
                      |+|.+|+.++..++..|++|+++++++........ ..+..+.... .+.           .-....+.-..++...+. 
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~-~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~~~a~~-   88 (192)
T d1f0ya2          11 GGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK-GIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVH-   88 (192)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHHHHTT-
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh-hHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccchhHhhhc-
Confidence            45999999999999999999999999764211100 0000000000 000           000000111112334555 


Q ss_pred             CCCcEEEecCCCChhhhHHHHHhCC--CCCeEEEeecccc
Q 025702           71 KGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGV  108 (249)
Q Consensus        71 ~~~d~Vi~~~~~~~~~~~~~~~a~~--~~~~~i~~Ss~~v  108 (249)
                       ++|.|+-+...+...-+.++..+.  -....|+.|+++.
T Consensus        89 -~ad~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasnTS~  127 (192)
T d1f0ya2          89 -STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS  127 (192)
T ss_dssp             -SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS
T ss_pred             -ccceehhhcccchhHHHHHHHHHhhhcccCceeeccCcc
Confidence             899999999988888888888765  2345566665443

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.10  E-value=0.013  Score=40.27  Aligned_cols=92  Identities=17%  Similarity=0.165  Sum_probs=50.0

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCc-eEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSK-ILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +||||++|+.+++.|.++. .++..+..+...-. .+        ....+. ..-......+.+.   ..+  ++|+||.
T Consensus         7 vGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~-~i--------~~~~p~~~~~~~~~~~~~~~---~~~--~~dvvf~   72 (176)
T d1vkna1           7 IGATGYTGLELVRLLKNHPEAKITYLSSRTYAGK-KL--------EEIFPSTLENSILSEFDPEK---VSK--NCDVLFT   72 (176)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTS-BH--------HHHCGGGCCCCBCBCCCHHH---HHH--HCSEEEE
T ss_pred             ECCCcHHHHHHHHHHHhCCCceEEEeeccccCCC-cc--------cccCchhhccccccccCHhH---hcc--ccceEEE
Confidence            5999999999999999875 56666654332211 00        000011 0101112223333   333  7899998


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEeeccccc
Q 025702           79 INGREADEVEPILDALPNLEQFIYCSSAGVY  109 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~Ss~~v~  109 (249)
                      +.+...  ...++....+ .++|=.|+..-+
T Consensus        73 a~p~~~--s~~~~~~~~~-~~VIDlSadfRl  100 (176)
T d1vkna1          73 ALPAGA--SYDLVRELKG-VKIIDLGADFRF  100 (176)
T ss_dssp             CCSTTH--HHHHHTTCCS-CEEEESSSTTTC
T ss_pred             ccccHH--HHHHHHhhcc-ceEEecCccccc
Confidence            877643  3344443333 478877765543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.04  E-value=0.026  Score=39.16  Aligned_cols=97  Identities=12%  Similarity=0.204  Sum_probs=58.8

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEe---ccCCH-HHHHHhhh--hCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKG---DRKDY-DFVKSSLS--AKGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---d~~d~-~~l~~~~~--~~~~d   74 (249)
                      .||+|-+|...++.....|.+|++++|++.......     ..+.+.+.. .++..   |..+. +.+.+...  ..++|
T Consensus        36 ~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~-----~~~~~lGad-~vi~~~~~~~~~~~~~v~~~~~~~g~~vd  109 (189)
T d1gu7a2          36 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-----ASLKELGAT-QVITEDQNNSREFGPTIKEWIKQSGGEAK  109 (189)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-----HHHHHHTCS-EEEEHHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred             eCCCchHHHHHHHHHhhcCCeEEEEEecccccchHH-----hhhhhcccc-EEEeccccchhHHHHHHHHHHhhccCCce
Confidence            478999999999999889999999998876532110     011111111 22222   12121 22333322  23699


Q ss_pred             EEEecCCCChhhhHHHHHhCCCCCeEEEeec
Q 025702           75 VVYDINGREADEVEPILDALPNLEQFIYCSS  105 (249)
Q Consensus        75 ~Vi~~~~~~~~~~~~~~~a~~~~~~~i~~Ss  105 (249)
                      +|+++.+  .......++.++...++|.++.
T Consensus       110 vv~D~vg--~~~~~~~~~~l~~~G~~v~~G~  138 (189)
T d1gu7a2         110 LALNCVG--GKSSTGIARKLNNNGLMLTYGG  138 (189)
T ss_dssp             EEEESSC--HHHHHHHHHTSCTTCEEEECCC
T ss_pred             EEEECCC--cchhhhhhhhhcCCcEEEEECC
Confidence            9999987  4556777888885568886653

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.04  E-value=0.01  Score=34.68  Aligned_cols=31  Identities=26%  Similarity=0.251  Sum_probs=28.2

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      +||+|-+|...++.+...|.+|+++++++++
T Consensus        38 ~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          38 TGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             EeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            5899999999999888899999999998765

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.02  E-value=0.02  Score=39.44  Aligned_cols=27  Identities=19%  Similarity=0.322  Sum_probs=22.4

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEec
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTR   27 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r   27 (249)
                      +||||++|+.|++.|.++ .+++..+..
T Consensus         7 iGATGyvG~eLlrlL~~HP~~ei~~l~~   34 (179)
T d2g17a1           7 VGASGYAGAELVSYVNRHPHMTITALTV   34 (179)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred             ECcccHHHHHHHHHHHhCCCCceEeeEe
Confidence            599999999999999998 467766543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.93  E-value=0.0052  Score=40.92  Aligned_cols=30  Identities=27%  Similarity=0.412  Sum_probs=25.9

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCC
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKA   30 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~   30 (249)
                      +||+|.+|++++..|..++  .++..+++++.
T Consensus         6 iGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           6 IGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             ECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            4889999999999999988  48999888753

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.93  E-value=0.023  Score=39.83  Aligned_cols=83  Identities=13%  Similarity=0.091  Sum_probs=51.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|..-|.+|++.++........                     +....+.+.++++  .+|+|+.+...
T Consensus        50 G~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~---------------------~~~~~~~l~~~l~--~sDii~~~~pl  106 (197)
T d1j4aa1          50 GTGHIGQVFMQIMEGFGAKVITYDIFRNPELEK---------------------KGYYVDSLDDLYK--QADVISLHVPD  106 (197)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH---------------------TTCBCSCHHHHHH--HCSEEEECSCC
T ss_pred             cccccchhHHHhHhhhcccccccCccccccccc---------------------ceeeecccccccc--ccccccccCCc
Confidence            679999999999999999999998765432110                     1112234666776  78887766554


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +..    .....++.+++..-+|.+|=..+
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~sRG~i  136 (197)
T d1j4aa1         107 VPANVHMINDESIAKMKQDVVIVNVSRGPL  136 (197)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred             cccccccccHHHHhhhCCccEEEecCchhh
Confidence            322    12445555665456666664333

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.90  E-value=0.0028  Score=38.36  Aligned_cols=63  Identities=14%  Similarity=0.050  Sum_probs=41.1

Q ss_pred             CCCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      +||+|.-|  |++.|+++|++|.+-++...+..+.+.          ..++.+..+  .+.+.    ++  ++|.||...
T Consensus         9 IgG~GMs~--LA~~L~~~G~~VsGSD~~~~~~t~~L~----------~~Gi~i~~g--h~~~~----i~--~~d~vV~Ss   68 (89)
T d1j6ua1           9 IGGIGMSA--VALHEFSNGNDVYGSNIEETERTAYLR----------KLGIPIFVP--HSADN----WY--DPDLVIKTP   68 (89)
T ss_dssp             TTSHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHH----------HTTCCEESS--CCTTS----CC--CCSEEEECT
T ss_pred             ECHHHHHH--HHHHHHhCCCeEEEEeCCCChhHHHHH----------HCCCeEEee--ecccc----cC--CCCEEEEec
Confidence            35666544  799999999999999988655322222          245665543  23332    23  789999887


Q ss_pred             CCC
Q 025702           81 GRE   83 (249)
Q Consensus        81 ~~~   83 (249)
                      +..
T Consensus        69 AI~   71 (89)
T d1j6ua1          69 AVR   71 (89)
T ss_dssp             TCC
T ss_pred             CcC
Confidence            753

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.87  E-value=0.035  Score=38.50  Aligned_cols=82  Identities=17%  Similarity=0.060  Sum_probs=53.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|..-|.+|+..++.......               ..       ...+.++++++  ..|+|+.+...
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---------------~~-------~~~~~l~ell~--~sDii~i~~pl  106 (188)
T d1sc6a1          51 GYGHIGTQLGILAESLGMYVYFYDIENKLPLG---------------NA-------TQVQHLSDLLN--MSDVVSLHVPE  106 (188)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCT---------------TC-------EECSCHHHHHH--HCSEEEECCCS
T ss_pred             ecccchhhhhhhcccccceEeeccccccchhh---------------hh-------hhhhhHHHHHh--hccceeecccC
Confidence            67899999999999999999999986543211               11       11124566776  77888766554


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +..    -....++.+++...+|.+|=..+
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~aRG~l  136 (188)
T d1sc6a1         107 NPSTKNMMGAKEISLMKPGSLLINASRGTV  136 (188)
T ss_dssp             STTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred             CcchhhhccHHHHhhCCCCCEEEEcCcHHh
Confidence            321    24556666765556776664443

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.56  E-value=0.055  Score=37.83  Aligned_cols=81  Identities=14%  Similarity=0.025  Sum_probs=52.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|..-|.+|++.++.......              ..+.     .   ..++++++  .+|+|+.+...
T Consensus        52 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------------~~~~-----~---~~l~~l~~--~~D~v~~~~pl  107 (199)
T d1dxya1          52 GTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH--------------PDFD-----Y---VSLEDLFK--QSDVIDLHVPG  107 (199)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCCSSCC--------------TTCE-----E---CCHHHHHH--HCSEEEECCCC
T ss_pred             ecccccccccccccccceeeeccCCccchhhh--------------cchh-----H---HHHHHHHH--hcccceeeecc
Confidence            67999999999999999999999987554211              1111     1   23556666  78888876654


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeeccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      +..    --...++.++...-+|.+|=..
T Consensus       108 t~~T~~li~~~~l~~mk~~a~lIN~aRG~  136 (199)
T d1dxya1         108 IEQNTHIINEAAFNLMKPGAIVINTARPN  136 (199)
T ss_dssp             CGGGTTSBCHHHHHHSCTTEEEEECSCTT
T ss_pred             cccccccccHHHhhccCCceEEEecccHh
Confidence            322    2344566677555777776433

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.55  E-value=0.022  Score=34.78  Aligned_cols=62  Identities=19%  Similarity=0.259  Sum_probs=41.0

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      ||+|.  +.|++.|.++|++|.+-++......+.+.          ..++.+..+.-  ++.    +.  +.|.||...+
T Consensus        17 gG~GM--s~LA~~L~~~G~~VsGSD~~~~~~~~~L~----------~~Gi~v~~g~~--~~~----i~--~~d~vV~S~A   76 (96)
T d1p3da1          17 GGAGM--SGIAEILLNEGYQISGSDIADGVVTQRLA----------QAGAKIYIGHA--EEH----IE--GASVVVVSSA   76 (96)
T ss_dssp             TSTTH--HHHHHHHHHHTCEEEEEESCCSHHHHHHH----------HTTCEEEESCC--GGG----GT--TCSEEEECTT
T ss_pred             CHHHH--HHHHHHHHhCCCEEEEEeCCCChhhhHHH----------HCCCeEEECCc--ccc----CC--CCCEEEECCC
Confidence            55554  66899999999999999988655322221          24666554432  222    33  7899998877


Q ss_pred             CC
Q 025702           82 RE   83 (249)
Q Consensus        82 ~~   83 (249)
                      ..
T Consensus        77 I~   78 (96)
T d1p3da1          77 IK   78 (96)
T ss_dssp             SC
T ss_pred             cC
Confidence            53

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.52  E-value=0.0062  Score=41.62  Aligned_cols=87  Identities=13%  Similarity=0.077  Sum_probs=53.1

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccC-CHHHHHHhhhhCCCcEEEecCCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRK-DYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~-d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      +|.+|...++.+...|.+|+++++++.+...         ..+.  +...+. |.. +.+..+...+  ++|.++.+.+.
T Consensus        36 aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~---------a~~l--Ga~~~i-~~~~~~~~~~~~~~--~~d~vi~~~~~  101 (168)
T d1piwa2          36 LGGIGSMGTLISKAMGAETYVISRSSRKRED---------AMKM--GADHYI-ATLEEGDWGEKYFD--TFDLIVVCASS  101 (168)
T ss_dssp             CSHHHHHHHHHHHHHTCEEEEEESSSTTHHH---------HHHH--TCSEEE-EGGGTSCHHHHSCS--CEEEEEECCSC
T ss_pred             CCCcchhHHHHhhhccccccccccchhHHHH---------hhcc--CCcEEe-eccchHHHHHhhhc--ccceEEEEecC
Confidence            4889999998888889999999998776321         1111  222222 333 2333444444  89999998765


Q ss_pred             Chhh-hHHHHHhCCCCCeEEEee
Q 025702           83 EADE-VEPILDALPNLEQFIYCS  104 (249)
Q Consensus        83 ~~~~-~~~~~~a~~~~~~~i~~S  104 (249)
                      .... ....++.++...+++.++
T Consensus       102 ~~~~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1piwa2         102 LTDIDFNIMPKAMKVGGRIVSIS  124 (168)
T ss_dssp             STTCCTTTGGGGEEEEEEEEECC
T ss_pred             CccchHHHHHHHhhccceEEEec
Confidence            4332 334455555345777765

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.49  E-value=0.22  Score=33.51  Aligned_cols=90  Identities=13%  Similarity=0.128  Sum_probs=57.8

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCce-EEEEeccCCHHHHHHhhh---hCCCcEEE
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKI-LHLKGDRKDYDFVKSSLS---AKGFDVVY   77 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~d~~d~~~l~~~~~---~~~~d~Vi   77 (249)
                      |.|.+|...+..+...|. +|+++++++.+....         .+  -+. .++..+-.+.....+.+.   ..++|+||
T Consensus        34 G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a---------~~--~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi  102 (171)
T d1pl8a2          34 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA---------KE--IGADLVLQISKESPQEIARKVEGQLGCKPEVTI  102 (171)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH---------HH--TTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCceEEeccCCHHHHHHH---------HH--hCCcccccccccccccccccccccCCCCceEEE
Confidence            459999999999988897 799988887663210         01  122 222333334444444332   24799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      .+.|. .......++.++...++++++
T Consensus       103 d~~G~-~~~~~~a~~~~~~gG~iv~~G  128 (171)
T d1pl8a2         103 ECTGA-EASIQAGIYATRSGGTLVLVG  128 (171)
T ss_dssp             ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred             eccCC-chhHHHHHHHhcCCCEEEEEe
Confidence            99986 334566777788666888776

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=94.34  E-value=0.038  Score=37.99  Aligned_cols=89  Identities=15%  Similarity=0.225  Sum_probs=55.3

Q ss_pred             CCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--H-H---HHHHhhhhCCCc
Q 025702            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--Y-D---FVKSSLSAKGFD   74 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~-~---~l~~~~~~~~~d   74 (249)
                      |+ |-+|...++.+...|. +|+++++++.+...         ..+.+.. .++  |..+  . +   .+.+.....++|
T Consensus        36 Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~---------a~~lGa~-~vi--~~~~~~~~~~~~~i~~~~~~~g~D  102 (182)
T d1vj0a2          36 GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKL---------AEEIGAD-LTL--NRRETSVEERRKAIMDITHGRGAD  102 (182)
T ss_dssp             CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHH---------HHHTTCS-EEE--ETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred             CC-Cccchhheecccccccccccccccccccccc---------cccccce-EEE--eccccchHHHHHHHHHhhCCCCce
Confidence            54 8899999999999996 79999998765311         0111111 222  3332  2 2   233333345799


Q ss_pred             EEEecCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           75 VVYDINGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        75 ~Vi~~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      +||.+.|.. ......++.++...+++.++
T Consensus       103 vvid~vG~~-~~~~~a~~~l~~~G~iv~~G  131 (182)
T d1vj0a2         103 FILEATGDS-RALLEGSELLRRGGFYSVAG  131 (182)
T ss_dssp             EEEECSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             EEeecCCch-hHHHHHHHHhcCCCEEEEEe
Confidence            999998862 34566677777445777665

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.33  E-value=0.017  Score=40.38  Aligned_cols=85  Identities=11%  Similarity=0.022  Sum_probs=51.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.|..-|.+|++.++........              .     .++...+.++++++  .+|+|+.+...
T Consensus        56 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~--------------~-----~~~~~~~~l~~ll~--~sD~i~~~~pl  114 (193)
T d1mx3a1          56 GLGRVGQAVALRAKAFGFNVLFYDPYLSDGVER--------------A-----LGLQRVSTLQDLLF--HSDCVTLHCGL  114 (193)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHH--------------H-----HTCEECSSHHHHHH--HCSEEEECCCC
T ss_pred             ccccccccceeeeeccccceeeccCcccccchh--------------h-----hccccccchhhccc--cCCEEEEeecc
Confidence            578999999999999999999999875542110              0     01112234556666  77777765543


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +..    .-...+..++...-+|.+|=..+
T Consensus       115 t~~T~~li~~~~l~~mk~~a~lIN~sRG~i  144 (193)
T d1mx3a1         115 NEHNHHLINDFTVKQMRQGAFLVNTARGGL  144 (193)
T ss_dssp             CTTCTTSBSHHHHTTSCTTEEEEECSCTTS
T ss_pred             cccchhhhhHHHHhccCCCCeEEecCCceE
Confidence            221    13345555664456666664443

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.30  E-value=0.022  Score=39.47  Aligned_cols=96  Identities=16%  Similarity=0.159  Sum_probs=56.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCC-------------CCchhhhhccCceEEEEeccCCHHHHHHhhh
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPG-------------ESDQEFAEFSSKILHLKGDRKDYDFVKSSLS   69 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~   69 (249)
                      |+|.+|+.++..++..|++|+++++++.........             ..+.........+.. ..|.       +.+.
T Consensus        11 GaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~-~~~~-------~~~~   82 (186)
T d1wdka3          11 GAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP-TLSY-------GDFG   82 (186)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE-ESSS-------TTGG
T ss_pred             CcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeec-cccc-------cccc
Confidence            459999999999999999999999987542111000             000000000011111 1111       1123


Q ss_pred             hCCCcEEEecCCCChhhhHHHHHhCC--CCCeEEEeecccc
Q 025702           70 AKGFDVVYDINGREADEVEPILDALP--NLEQFIYCSSAGV  108 (249)
Q Consensus        70 ~~~~d~Vi~~~~~~~~~~~~~~~a~~--~~~~~i~~Ss~~v  108 (249)
                        ++|.||-+...+...-+.++..+.  -.+..|+.|+++.
T Consensus        83 --~adlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSnTS~  121 (186)
T d1wdka3          83 --NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST  121 (186)
T ss_dssp             --GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred             --ccceeeeeecchHHHHHHHHHHHHhhcCCCeeEEecccc
Confidence              889999998888887777777755  2334555555443

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=94.30  E-value=0.03  Score=38.31  Aligned_cols=89  Identities=13%  Similarity=0.071  Sum_probs=56.1

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEEe
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi~   78 (249)
                      |+|-+|...++.+...|. +|+++++++.+....         .+.+ -.+++  |..+   .+.+.+.....++|+||.
T Consensus        35 GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a---------~~lG-a~~~i--~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          35 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA---------KFYG-ATDIL--NYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             CCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH---------HHHT-CSEEE--CGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             cCCcchhhhhhhhhcccccccccccchhhhHHHH---------HhhC-ccccc--cccchhHHHHHHHHhhccCcceEEE
Confidence            348899999998888896 788888876552110         1111 12222  4433   344555555557999999


Q ss_pred             cCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           79 INGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      +.+.. ......++.++...+++.++
T Consensus       103 ~~g~~-~~~~~a~~~~~~~G~iv~~G  127 (174)
T d1jqba2         103 AGGGS-ETLSQAVKMVKPGGIISNIN  127 (174)
T ss_dssp             CSSCT-THHHHHHHHEEEEEEEEECC
T ss_pred             ccCCH-HHHHHHHHHHhcCCEEEEEe
Confidence            99863 33455677777555777765

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.28  E-value=0.02  Score=38.94  Aligned_cols=91  Identities=12%  Similarity=0.186  Sum_probs=54.3

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~V   76 (249)
                      +|++|-+|...+..+...| .+|+++++++.+...         ..+.+.. .++  |..+.+   .+.+.....++|+|
T Consensus        34 ~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~---------~~~~Ga~-~~i--~~~~~~~~~~~~~~~~~~~~d~v  101 (170)
T d1jvba2          34 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA---------AKRAGAD-YVI--NASMQDPLAEIRRITESKGVDAV  101 (170)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH---------HHHHTCS-EEE--ETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             EeccccceeeeeecccccccccccccccchhhHHH---------HHHcCCc-eee--ccCCcCHHHHHHHHhhcccchhh
Confidence            4788999999999998888 588888887654211         0111111 223  334333   33333333479999


Q ss_pred             EecCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           77 YDINGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      |.+++. .......++.++...+++.++
T Consensus       102 id~~g~-~~~~~~a~~~l~~~G~iv~~G  128 (170)
T d1jvba2         102 IDLNNS-EKTLSVYPKALAKQGKYVMVG  128 (170)
T ss_dssp             EESCCC-HHHHTTGGGGEEEEEEEEECC
T ss_pred             hccccc-chHHHhhhhhcccCCEEEEec
Confidence            999874 223344455666445777665

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=94.26  E-value=0.013  Score=39.77  Aligned_cols=89  Identities=13%  Similarity=0.113  Sum_probs=50.4

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEe-cCCCcccc-CCCCCCchhhhhc-cCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFT-RGKAPIAQ-QLPGESDQEFAEF-SSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~-r~~~~~~~-~~~~~~~~~~~~~-~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      .|++|.+|+.+++.+.+. +.++.+.. |...+... ....     .... ..++.+ .      +.+..+++  .+|+|
T Consensus        10 ~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~-----~~~~~~~~~~~-~------~~~~~~~~--~~DVi   75 (162)
T d1diha1          10 AGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGE-----LAGAGKTGVTV-Q------SSLDAVKD--DFDVF   75 (162)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTC-----SSSSSCCSCCE-E------SCSTTTTT--SCSEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhh-----hhccccCCcee-e------ccHHHHhc--ccceE
Confidence            489999999999999886 56766554 33322110 0000     0000 011111 1      22334555  89999


Q ss_pred             EecCCCChhhhHHHHHhCC-CCCeEEEeec
Q 025702           77 YDINGREADEVEPILDALP-NLEQFIYCSS  105 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~-~~~~~i~~Ss  105 (249)
                      |.+..  ...+...++.|. ...++|.-+|
T Consensus        76 IDFs~--p~~~~~~~~~a~~~~~~~ViGTT  103 (162)
T d1diha1          76 IDFTR--PEGTLNHLAFCRQHGKGMVIGTT  103 (162)
T ss_dssp             EECSC--HHHHHHHHHHHHHTTCEEEECCC
T ss_pred             EEecc--HHHHHHHHHHHHhccceeEEecC
Confidence            99976  467777777766 4446554443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=94.22  E-value=0.01  Score=39.26  Aligned_cols=70  Identities=14%  Similarity=0.104  Sum_probs=41.6

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhh---hccCceEEEEeccCCHHHHHHhhhhCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFA---EFSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~   75 (249)
                      +|++|.+|++++..|..++.  ++..++........   +....++.   .......+...|+   ++    ++  ++|+
T Consensus         6 iGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~---~g~a~Dl~~~~~~~~~~~i~~~~~---~~----~~--~aDi   73 (142)
T d1o6za1           6 VGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDT---VGQAADTNHGIAYDSNTRVRQGGY---ED----TA--GSDV   73 (142)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHH---HHHHHHHHHHHTTTCCCEEEECCG---GG----GT--TCSE
T ss_pred             ECCCCcHHHHHHHHHHhCCCCCEEEEEecCCccccc---ceeecchhhcccccCCceEeeCCH---HH----hh--hcCE
Confidence            48899999999999999984  78887754322100   00000111   1123444444443   22    34  9999


Q ss_pred             EEecCCC
Q 025702           76 VYDINGR   82 (249)
Q Consensus        76 Vi~~~~~   82 (249)
                      |+-++|.
T Consensus        74 VvitaG~   80 (142)
T d1o6za1          74 VVITAGI   80 (142)
T ss_dssp             EEECCCC
T ss_pred             EEEeccc
Confidence            9999885

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.04  E-value=0.085  Score=33.73  Aligned_cols=64  Identities=17%  Similarity=0.168  Sum_probs=50.0

Q ss_pred             cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         6 ~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      +.+.+.+++|.+.|++++.+..++.......            .-..-++..-...+.+.++++.+++|.|+-..|
T Consensus        28 y~~~~a~~alke~g~~~iliN~NP~TVstd~------------d~aD~lYfePlt~e~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          28 YSGAQACKALREEGYRVINVNSNPATIMTDP------------EMADATYIEPIHWEVVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSCTTCGGGCG------------GGSSEEECSCCCHHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHHHcCCeEEEecCchHhhhcCh------------hhcceeeeecCCHHHHHHHHHHhCcCCeEEEee
Confidence            4678899999999999999999998854321            122334556677899999999999999997665

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.82  E-value=0.13  Score=32.37  Aligned_cols=64  Identities=13%  Similarity=0.038  Sum_probs=49.2

Q ss_pred             cchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            6 FIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         6 ~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      +.+.+.+++|.+.|++++.+..+|........            -..-++..-...+.+.++++.+++|.|+-..|
T Consensus        25 y~~~~a~~aLk~~g~~~IliN~NPeTVstd~d------------~aD~lYfeplt~e~v~~Ii~~E~p~~ii~~~G   88 (121)
T d1a9xa4          25 YCCVHASLALREDGYETIMVNCNPETVSTDYD------------TSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT------------SSSEEECCCCSHHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHHhcCCeEEEEecChhhhhcChh------------hcCceEEccCCHHHHHHHHHHhCCCEEEeehh
Confidence            56789999999999999999999988543221            22334555667888999999889999997655

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.76  E-value=0.029  Score=32.65  Aligned_cols=30  Identities=20%  Similarity=0.136  Sum_probs=26.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |+|.+|+.++.+-.+.|+++++++-+++..
T Consensus         8 G~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           8 GNGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             BCSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             cCCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            679999999999999999999999876653

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.63  E-value=0.027  Score=36.40  Aligned_cols=66  Identities=15%  Similarity=0.059  Sum_probs=48.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |-|-+|+.+++.|.  +++|.++..++......           ...++.++.+|.++++.|+++-- .+++.++-+...
T Consensus         7 G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~-----------~~~~~~~i~Gd~~~~~~L~~a~i-~~A~~vi~~~~~   72 (129)
T d2fy8a1           7 GWSESTLECLRELR--GSEVFVLAEDENVRKKV-----------LRSGANFVHGDPTRVSDLEKANV-RGARAVIVNLES   72 (129)
T ss_dssp             SCCHHHHHHHHTSC--GGGEEEEESCTTHHHHH-----------HHTTCEEEESCTTSHHHHHHTTC-TTCSEEEECCSS
T ss_pred             CCCHHHHHHHHHHc--CCCCEEEEcchHHHHHH-----------HhcCccccccccCCHHHHHHhhh-hcCcEEEEeccc
Confidence            45789999999984  56788888776653211           13689999999999998876432 378999977664

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=93.55  E-value=0.058  Score=37.08  Aligned_cols=75  Identities=17%  Similarity=0.162  Sum_probs=50.5

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|..|++++.+|.+.|. +++++.|+++...+...  ...++.. .-.......++.+.+.+...+.  .+|.|||+..
T Consensus        25 GaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~--l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~diiIN~Tp   99 (182)
T d1vi2a1          25 GAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA--FAQRVNE-NTDCVVTVTDLADQQAFAEALA--SADILTNGTK   99 (182)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH--HHHHHHH-HSSCEEEEEETTCHHHHHHHHH--TCSEEEECSS
T ss_pred             CCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHH--HHHHHHh-hcCcceEeeecccccchhhhhc--ccceeccccC
Confidence            457789999999999985 78888888765321100  0001111 1123455678888888888887  9999999976


Q ss_pred             C
Q 025702           82 R   82 (249)
Q Consensus        82 ~   82 (249)
                      .
T Consensus       100 ~  100 (182)
T d1vi2a1         100 V  100 (182)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.029  Score=38.08  Aligned_cols=86  Identities=14%  Similarity=0.122  Sum_probs=56.4

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~~   83 (249)
                      +|-+|...++.+...|.+++++++++.+...         ..+  -+... ..|..+.+......+  ++|++|.+.+..
T Consensus        39 aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~---------a~~--lGad~-~i~~~~~~~~~~~~~--~~D~vid~~g~~  104 (168)
T d1uufa2          39 IGGLGHMGIKLAHAMGAHVVAFTTSEAKREA---------AKA--LGADE-VVNSRNADEMAAHLK--SFDFILNTVAAP  104 (168)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHH--HTCSE-EEETTCHHHHHTTTT--CEEEEEECCSSC
T ss_pred             cchHHHHHHHHhhcccccchhhccchhHHHH---------Hhc--cCCcE-EEECchhhHHHHhcC--CCceeeeeeecc
Confidence            4789999998888899999999987765211         011  12221 236666666555555  899999998853


Q ss_pred             hhhhHHHHHhCCCCCeEEEee
Q 025702           84 ADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        84 ~~~~~~~~~a~~~~~~~i~~S  104 (249)
                       ......++.++...+++.++
T Consensus       105 -~~~~~~~~~l~~~G~iv~~G  124 (168)
T d1uufa2         105 -HNLDDFTTLLKRDGTMTLVG  124 (168)
T ss_dssp             -CCHHHHHTTEEEEEEEEECC
T ss_pred             -hhHHHHHHHHhcCCEEEEec
Confidence             23455566666445777665

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=93.33  E-value=0.0068  Score=41.04  Aligned_cols=64  Identities=19%  Similarity=0.193  Sum_probs=43.2

Q ss_pred             CCcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecC
Q 025702            2 GGTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      |+ |-+|+.+++.|...|. ++.++.|+..+.... .       .++  +..     ..+.+++.+.+.  ++|+||.+.
T Consensus        31 Ga-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l-~-------~~~--~~~-----~~~~~~~~~~l~--~~Divi~at   92 (159)
T d1gpja2          31 GA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVEL-A-------RDL--GGE-----AVRFDELVDHLA--RSDVVVSAT   92 (159)
T ss_dssp             SC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-H-------HHH--TCE-----ECCGGGHHHHHH--TCSEEEECC
T ss_pred             CC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHH-H-------Hhh--hcc-----cccchhHHHHhc--cCCEEEEec
Confidence            54 9999999999999997 688888886553211 1       000  122     123456667777  999999997


Q ss_pred             CCC
Q 025702           81 GRE   83 (249)
Q Consensus        81 ~~~   83 (249)
                      +..
T Consensus        93 ss~   95 (159)
T d1gpja2          93 AAP   95 (159)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            643

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.31  E-value=0.014  Score=40.06  Aligned_cols=30  Identities=23%  Similarity=0.414  Sum_probs=27.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPI   32 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~   32 (249)
                      |.|.+|..+++.|++.||+|++.+|++++.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            579999999999999999999999987763

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=93.31  E-value=0.12  Score=31.01  Aligned_cols=63  Identities=11%  Similarity=0.138  Sum_probs=41.6

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGRE   83 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~~   83 (249)
                      -|-.|.++++.|.++|++|++.+.+.........          ...+.++.... +.+    .+.  ++|.||-.-|..
T Consensus        13 lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~----------~~~~~~~~~~~-~~~----~~~--~~d~vi~SPGi~   75 (93)
T d2jfga1          13 LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL----------PEAVERHTGSL-NDE----WLM--AADLIVASPGIA   75 (93)
T ss_dssp             CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS----------CTTSCEEESBC-CHH----HHH--HCSEEEECTTSC
T ss_pred             ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH----------hhccceeeccc-chh----hhc--cCCEEEECCCCC
Confidence            4678999999999999999999987664321111          13444444443 222    234  779999887753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.18  E-value=0.083  Score=33.57  Aligned_cols=29  Identities=24%  Similarity=0.268  Sum_probs=27.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|++|-.++..|.+.|.+|+++.+.+..
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          37 GGGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CcchhHHHHHHHhhcccceEEEEeecccc
Confidence            67999999999999999999999998765

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=93.00  E-value=0.021  Score=37.90  Aligned_cols=67  Identities=13%  Similarity=0.203  Sum_probs=42.3

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhh---hccCceEEEEeccCCHHHHHHhhhhCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFA---EFSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~   75 (249)
                      +| +|++|..++..|..+|  .++.++++++.......     .++.   .......+..+|+   +    .++  ++|+
T Consensus        11 IG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a-----~Dl~~a~~~~~~~~~~~~d~---~----~~~--~adi   75 (146)
T d1ez4a1          11 VG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDA-----LDLEDAQAFTAPKKIYSGEY---S----DCK--DADL   75 (146)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHH-----HHHHGGGGGSCCCEEEECCG---G----GGT--TCSE
T ss_pred             EC-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHH-----HHHhccccccCCceEeeccH---H----Hhc--cccE
Confidence            36 5999999999999987  58999998764321000     0010   1122344444544   2    234  9999


Q ss_pred             EEecCCC
Q 025702           76 VYDINGR   82 (249)
Q Consensus        76 Vi~~~~~   82 (249)
                      |+.+++.
T Consensus        76 vvitag~   82 (146)
T d1ez4a1          76 VVITAGA   82 (146)
T ss_dssp             EEECCCC
T ss_pred             EEEeccc
Confidence            9999876

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=92.87  E-value=0.032  Score=38.81  Aligned_cols=86  Identities=14%  Similarity=0.077  Sum_probs=52.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.||+.+++.+..-|.+|+..++..........           .       .....+.++++++  .+|+|+.+...
T Consensus        54 G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-----------~-------~~~~~~~l~~ll~--~sD~v~l~~pl  113 (191)
T d1gdha1          54 GFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-----------Y-------QATFHDSLDSLLS--VSQFFSLNAPS  113 (191)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-----------H-------TCEECSSHHHHHH--HCSEEEECCCC
T ss_pred             ecccchHHHHHHHHhhccccccccccccccchhhc-----------c-------cccccCCHHHHHh--hCCeEEecCCC
Confidence            56899999999999999999999876554211000           0       0111234667777  77888765544


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeecccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAGV  108 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~v  108 (249)
                      +..    --...++.++...-||.+|=..+
T Consensus       114 t~~T~~li~~~~l~~mk~~a~lIN~sRG~i  143 (191)
T d1gdha1         114 TPETRYFFNKATIKSLPQGAIVVNTARGDL  143 (191)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSCGGG
T ss_pred             CchHhheecHHHhhCcCCccEEEecCCccc
Confidence            221    23445566665556776664443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.87  E-value=0.38  Score=31.04  Aligned_cols=80  Identities=15%  Similarity=0.226  Sum_probs=45.6

Q ss_pred             CCCcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh---hCCCcEE
Q 025702            1 MGGTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS---AKGFDVV   76 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~---~~~~d~V   76 (249)
                      .|++|-+|+.+++.+.+. ++++.+.....+....         ..  ..+.. +..|++.++.+.+.++   +.+.-.|
T Consensus         5 ~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~---------~~--~~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~V   72 (135)
T d1yl7a1           5 LGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSL---------LT--DGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAV   72 (135)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHH---------HH--TTTCS-EEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhh---------hc--cccCC-EEEEcccHHHHHHHHHHHHhcCCCEE
Confidence            489999999999998875 5777665533222110         00  01121 3457766654443332   3467777


Q ss_pred             EecCCCChhhhHHHHH
Q 025702           77 YDINGREADEVEPILD   92 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~   92 (249)
                      +-+.|........+-+
T Consensus        73 iGTTG~~~~~~~~l~~   88 (135)
T d1yl7a1          73 VGTTGFTAERFQQVES   88 (135)
T ss_dssp             ECCCCCCHHHHHHHHH
T ss_pred             EeccccchhHHHHHHH
Confidence            7777776554444444

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.62  E-value=0.12  Score=34.15  Aligned_cols=88  Identities=18%  Similarity=0.192  Sum_probs=52.2

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEec-------------------cC
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGD-------------------RK   59 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d-------------------~~   59 (249)
                      +|+||.||+....-+.+.  .++|.+++-+.+-..  +    ..+..++.+..-++.-.                   +.
T Consensus         7 lGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~--L----~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           7 LGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTR--M----VEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHH--H----HHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             EcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHH--H----HHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence            599999999999998886  489999987654410  0    11222222222222100                   12


Q ss_pred             CHHHHHHhhhhCCCcEEEecCCCChhhhHHHHHhCC
Q 025702           60 DYDFVKSSLSAKGFDVVYDINGREADEVEPILDALP   95 (249)
Q Consensus        60 d~~~l~~~~~~~~~d~Vi~~~~~~~~~~~~~~~a~~   95 (249)
                      ..+.+.++.....+|.|++...- ..+....+.+++
T Consensus        81 g~~~l~~~~~~~~~D~vi~AI~G-~aGL~~t~~aik  115 (151)
T d1q0qa2          81 GQQAACDMAALEDVDQVMAAIVG-AAGLLPTLAAIR  115 (151)
T ss_dssp             SHHHHHHHHTCTTCCEEEECCSS-GGGHHHHHHHHH
T ss_pred             ChHHHHHHhcCCCCCEEEEecCc-ccHHHHHHHHHh
Confidence            34566666655578998876432 456666666666

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.62  E-value=0.083  Score=34.93  Aligned_cols=67  Identities=18%  Similarity=0.288  Sum_probs=41.9

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCccccCCCCCCchhhhh----ccCceEEEEeccCCHHHHHHhhhhCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAPIAQQLPGESDQEFAE----FSSKILHLKGDRKDYDFVKSSLSAKGFD   74 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~d~~d~~~l~~~~~~~~~d   74 (249)
                      +|+ |.+|.+++..|...+.  ++..+++++.......     .++..    ....+.+...|+       +.++  ++|
T Consensus        12 iGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a-----~Dl~~~~~~~~~~~~~~~~d~-------~~l~--daD   76 (148)
T d1ldna1          12 IGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDA-----MDFNHGKVFAPKPVDIWHGDY-------DDCR--DAD   76 (148)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHH-----HHHHHHTTSSSSCCEEEECCG-------GGTT--TCS
T ss_pred             ECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchh-----ccHhhCccccCCCeEEEECCH-------HHhc--cce
Confidence            465 9999999999999874  8999988765421100     01110    123344444443       2344  899


Q ss_pred             EEEecCCC
Q 025702           75 VVYDINGR   82 (249)
Q Consensus        75 ~Vi~~~~~   82 (249)
                      +|+.+++.
T Consensus        77 vvvitag~   84 (148)
T d1ldna1          77 LVVICAGA   84 (148)
T ss_dssp             EEEECCSC
T ss_pred             eEEEeccc
Confidence            99999876

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.54  E-value=0.11  Score=32.43  Aligned_cols=85  Identities=14%  Similarity=0.093  Sum_probs=54.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|.+|..-++.|++.|.+|++++....+....+..         ..+++++...+.+.+     +.  +++.|+.+.+.
T Consensus        19 G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~d-----l~--~~~lv~~at~d   82 (113)
T d1pjqa1          19 GGGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN---------EGMLTLVEGPFDETL-----LD--SCWLAIAATDD   82 (113)
T ss_dssp             CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT---------TTSCEEEESSCCGGG-----GT--TCSEEEECCSC
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh---------cCCceeeccCCCHHH-----hC--CCcEEeecCCC
Confidence            568999999999999999999998766553221111         246777776665432     44  77888865443


Q ss_pred             ChhhhHHHHHhCCCCCeEEEee
Q 025702           83 EADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        83 ~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                       ...-..+.+.++..+.+|++.
T Consensus        83 -~~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          83 -DTVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             -HHHHHHHHHHHHHTTCEEEET
T ss_pred             -HHHHHHHHHHHHHcCCEEEeC
Confidence             333445556666444566544

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.53  E-value=0.24  Score=32.44  Aligned_cols=29  Identities=24%  Similarity=0.368  Sum_probs=22.5

Q ss_pred             CCCcccchHHHHHHHHHc-C--CeEEEEecCC
Q 025702            1 MGGTRFIGVFLSRLLVKE-G--HQVTLFTRGK   29 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~-g--~~v~~~~r~~   29 (249)
                      +|++|.+|++++..|..+ +  .++..++..+
T Consensus         6 iGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~   37 (145)
T d2cmda1           6 LGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (145)
T ss_dssp             ETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred             EcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence            588999999999887543 4  6888887643

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=92.50  E-value=0.042  Score=37.49  Aligned_cols=88  Identities=14%  Similarity=0.153  Sum_probs=50.9

Q ss_pred             CCcccchHHHHHHHHHcCCeEE-EEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHH---HHHHhhhhCCCcEEE
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVT-LFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYD---FVKSSLSAKGFDVVY   77 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~---~l~~~~~~~~~d~Vi   77 (249)
                      |+ |-+|...+..+...|.+++ +.++++.+... .        .++ .-.+++  |..+++   .+.++.. .++|+||
T Consensus        36 G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-a--------~~~-Ga~~~i--~~~~~~~~~~i~~~t~-gg~D~vi  101 (174)
T d1f8fa2          36 GA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL-A--------KQL-GATHVI--NSKTQDPVAAIKEITD-GGVNFAL  101 (174)
T ss_dssp             SC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-H--------HHH-TCSEEE--ETTTSCHHHHHHHHTT-SCEEEEE
T ss_pred             CC-CHHHhhhhhcccccccceeeeeccHHHHHHH-H--------HHc-CCeEEE--eCCCcCHHHHHHHHcC-CCCcEEE
Confidence            54 8899999998888887655 45555443210 0        111 122333  444433   3333322 3799999


Q ss_pred             ecCCCChhhhHHHHHhCCCCCeEEEee
Q 025702           78 DINGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      .+.+. .......++.++...++++++
T Consensus       102 d~~G~-~~~~~~~~~~~~~~G~i~~~G  127 (174)
T d1f8fa2         102 ESTGS-PEILKQGVDALGILGKIAVVG  127 (174)
T ss_dssp             ECSCC-HHHHHHHHHTEEEEEEEEECC
T ss_pred             EcCCc-HHHHHHHHhcccCceEEEEEe
Confidence            99985 233455566666555777766

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=92.32  E-value=0.24  Score=32.30  Aligned_cols=30  Identities=17%  Similarity=0.244  Sum_probs=23.6

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~   31 (249)
                      +|+ |.+|.+++..|+.++.  ++..+++++..
T Consensus         7 IGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           7 IGA-GFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             ECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            465 9999999999999874  89999988765

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.23  E-value=0.054  Score=37.49  Aligned_cols=29  Identities=21%  Similarity=0.229  Sum_probs=25.8

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|+.+++.|..-|.+|...++...+
T Consensus        51 G~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          51 AAGRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CCSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             cccccchhhhhhhhccCceEEEEeecccc
Confidence            67899999999999999999999987654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=92.14  E-value=0.041  Score=37.43  Aligned_cols=91  Identities=15%  Similarity=0.137  Sum_probs=53.3

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|.+|...++.+...|. .|+++++++.+... .        .+ ....+++..+-.+.+...+.....++|+||.+.+
T Consensus        40 GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~-~--------~~-~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g  109 (172)
T d1h2ba2          40 GVGGLGHIAVQLLKVMTPATVIALDVKEEKLKL-A--------ER-LGADHVVDARRDPVKQVMELTRGRGVNVAMDFVG  109 (172)
T ss_dssp             CCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHH-H--------HH-TTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCChHHHHHHHHHHhhcCcccccccchhHHHHH-H--------hh-cccceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence            468899999998887775 66767776654211 0        11 1222333322222344444444457999999998


Q ss_pred             CChhhhHHHHHhCCCCCeEEEee
Q 025702           82 READEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        82 ~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      .. ......++.++...+++.++
T Consensus       110 ~~-~~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         110 SQ-ATVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             CH-HHHHHGGGGEEEEEEEEECC
T ss_pred             cc-hHHHHHHHHHhCCCEEEEEe
Confidence            52 23455566666446777665

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.96  E-value=0.14  Score=33.93  Aligned_cols=56  Identities=20%  Similarity=0.166  Sum_probs=40.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~   79 (249)
                      +.||+|..++..|.+.|.+|+++.+.+.....                     .|-.....+.+.+.+.+++...+.
T Consensus        48 ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~~---------------------~~~~~~~~~~~~l~~~GV~i~~~~  103 (156)
T d1djqa2          48 DTYFMAPSLAEKLATAGHEVTIVSGVHLANYM---------------------HFTLEYPNMMRRLHELHVEELGDH  103 (156)
T ss_dssp             CCSSHHHHHHHHHHHTTCEEEEEESSCTTTHH---------------------HHTTCHHHHHHHHHHTTCEEEETE
T ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCCccccc---------------------cchhHHHHHHHHHhhccceEEecc
Confidence            56999999999999999999999998654211                     133445556666665666666543

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.88  E-value=0.22  Score=34.75  Aligned_cols=88  Identities=14%  Similarity=0.089  Sum_probs=48.7

Q ss_pred             cccchHHHHHHHHHcCCeEEEEecCCCccc-cCCCCCCchhhhhccCceEEEE-eccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            4 TRFIGVFLSRLLVKEGHQVTLFTRGKAPIA-QQLPGESDQEFAEFSSKILHLK-GDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~~~-~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      ++..|..++++|++.|++|.++...+.+.. ............  ..++.++. .++.+++ +.+.++..++|.++.+..
T Consensus         8 ~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~--~~~i~~~~~~~~~~~~-~~~~i~~~~~Dlii~~g~   84 (203)
T d2blna2           8 YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAA--ERGIPVYAPDNVNHPL-WVERIAQLSPDVIFSFYY   84 (203)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHH--HHTCCEECCSCCCSHH-HHHHHHHTCCSEEEEESC
T ss_pred             cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHH--HcCCcceecccccchh-hhhhhhhhcccceeeeec
Confidence            455799999999999999987665443311 111111111111  23566554 3555554 445566679999987654


Q ss_pred             CChhhhHHHHHhCC
Q 025702           82 READEVEPILDALP   95 (249)
Q Consensus        82 ~~~~~~~~~~~a~~   95 (249)
                      . .---..+++..+
T Consensus        85 ~-~ii~~~il~~~~   97 (203)
T d2blna2          85 R-HLIYDEILQLAP   97 (203)
T ss_dssp             C-SCCCHHHHTTCT
T ss_pred             c-cchhcccchhhH
Confidence            3 233345665554

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.66  E-value=0.15  Score=33.82  Aligned_cols=19  Identities=21%  Similarity=0.135  Sum_probs=17.2

Q ss_pred             CCCcccchHHHHHHHHHcC
Q 025702            1 MGGTRFIGVFLSRLLVKEG   19 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g   19 (249)
                      +||+|++|++++..|...+
T Consensus        10 iGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1          10 TGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             SSTTSHHHHHHHHHHHTTT
T ss_pred             ECCCCHHHHHHHHHHHhcc
Confidence            6999999999999999865

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.60  E-value=0.077  Score=37.09  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|..++..|.+.|++|++++.++..
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            67999999999999999999999987654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.49  E-value=0.063  Score=37.01  Aligned_cols=83  Identities=13%  Similarity=0.076  Sum_probs=49.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.+..-|.+|++.++...+....            ...++        ...++++++  .+|+|+.+...
T Consensus        51 G~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~------------~~~~~--------~~~l~ell~--~sDiv~~~~Pl  108 (184)
T d1ygya1          51 GLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA------------QLGIE--------LLSLDDLLA--RADFISVHLPK  108 (184)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH------------HHTCE--------ECCHHHHHH--HCSEEEECCCC
T ss_pred             cccchhHHHHHHhhhccceEEeecCCCChhHHh------------hcCce--------eccHHHHHh--hCCEEEEcCCC
Confidence            678999999999998899999998876542110            01111        123456676  77888766554


Q ss_pred             Chh----hhHHHHHhCCCCCeEEEeeccc
Q 025702           83 EAD----EVEPILDALPNLEQFIYCSSAG  107 (249)
Q Consensus        83 ~~~----~~~~~~~a~~~~~~~i~~Ss~~  107 (249)
                      +..    --...+..++....||.+|=..
T Consensus       109 t~~T~~lin~~~l~~mk~~a~lIN~sRG~  137 (184)
T d1ygya1         109 TPETAGLIDKEALAKTKPGVIIVNAARGG  137 (184)
T ss_dssp             STTTTTCBCHHHHTTSCTTEEEEECSCTT
T ss_pred             CchhhhhhhHHHHhhhCCCceEEEecchh
Confidence            321    1233444455444666666333

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=91.27  E-value=0.0042  Score=41.75  Aligned_cols=81  Identities=16%  Similarity=0.102  Sum_probs=42.3

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |+|.+|+++++.|.+.++.+.+..|++++....         .+. .+.  ...+.      .++.+  ..|+||-+...
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l---------~~~-~~~--~~~~~------~~~~~--~~DiVil~v~d   65 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNL---------AEV-YGG--KAATL------EKHPE--LNGVVFVIVPD   65 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHH---------HHH-TCC--CCCSS------CCCCC-----CEEECSCT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcch---------hhc-ccc--cccch------hhhhc--cCcEEEEeccc
Confidence            689999999998866444446778876653211         100 011  01121      23444  78888877653


Q ss_pred             ChhhhHHHHHhCC-CCCeEEEeec
Q 025702           83 EADEVEPILDALP-NLEQFIYCSS  105 (249)
Q Consensus        83 ~~~~~~~~~~a~~-~~~~~i~~Ss  105 (249)
                        .....+++.+. +.+-+|++|+
T Consensus        66 --~~i~~v~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          66 --RYIKTVANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             --TTHHHHHTTTCCSSCCEEECCS
T ss_pred             --hhhhHHHhhhcccceeeeeccc
Confidence              45566777765 4445566654

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.21  E-value=0.53  Score=29.37  Aligned_cols=24  Identities=17%  Similarity=0.216  Sum_probs=20.6

Q ss_pred             ccchHHHHHHHHHcCCeEEEEecC
Q 025702            5 RFIGVFLSRLLVKEGHQVTLFTRG   28 (249)
Q Consensus         5 G~iG~~l~~~L~~~g~~v~~~~r~   28 (249)
                      +..|..+.+.|++.||+|+.+..+
T Consensus        14 ~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1          14 AKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             TSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCcHHHHHHHHHHCCCEEEEEccc
Confidence            678999999999999998887544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.19  E-value=0.14  Score=32.54  Aligned_cols=29  Identities=21%  Similarity=0.297  Sum_probs=26.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        30 G~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          30 GGGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCchHHHHHHHHHhhCcceeEEEecccc
Confidence            56999999999999999999999998765

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.12  E-value=0.2  Score=31.70  Aligned_cols=29  Identities=28%  Similarity=0.512  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|-.++..|.+.|.+|+++.+.+..
T Consensus        37 GgG~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          37 GSGYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CChHHHHHHHHHhhccceEEEEEEecCcc
Confidence            67999999999999999999999998755

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=90.77  E-value=1.5  Score=29.31  Aligned_cols=91  Identities=15%  Similarity=0.141  Sum_probs=55.2

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |.|-+|...+..+...|. .|++.+.++.+....         .++ .-..++...-.|  ...+.......++|+||.+
T Consensus        36 G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a---------~~~-Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~  105 (174)
T d1e3ia2          36 GLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA---------KAL-GATDCLNPRELDKPVQDVITELTAGGVDYSLDC  105 (174)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH---------HHT-TCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred             CCChHHHHHHHHHHHhCCceeeeeccchHHHHHH---------HHh-CCCcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence            358899999999999997 577777776552110         011 112222221112  3344444455699999999


Q ss_pred             CCCChhhhHHHHHhCC-CCCeEEEee
Q 025702           80 NGREADEVEPILDALP-NLEQFIYCS  104 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~-~~~~~i~~S  104 (249)
                      .|. .......++.++ +..+++.++
T Consensus       106 ~G~-~~~~~~a~~~~~~g~G~~v~vG  130 (174)
T d1e3ia2         106 AGT-AQTLKAAVDCTVLGWGSCTVVG  130 (174)
T ss_dssp             SCC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred             ccc-chHHHHHHHHhhcCCeEEEecC
Confidence            986 334555666666 456888776

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=90.63  E-value=0.044  Score=36.44  Aligned_cols=29  Identities=24%  Similarity=0.351  Sum_probs=25.9

Q ss_pred             CcccchHHHHHHHHHcC-CeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~   31 (249)
                      |+|.+|+++++.|++.| ++|++.+|+++.
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~   36 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEK   36 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence            56999999999999887 999999998765

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=90.58  E-value=1.2  Score=29.92  Aligned_cols=91  Identities=11%  Similarity=0.138  Sum_probs=55.8

Q ss_pred             CcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEE-eccCC-HHHHHHhhhhCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK-GDRKD-YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~d~~d-~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |.|-+|...+..+...| .+|+++++++.+.....         +++. ..++. -|-.+ .+.+.+.....++|++|.+
T Consensus        37 G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak---------~~GA-~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~  106 (176)
T d1d1ta2          37 GLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM---------AVGA-TECISPKDSTKPISEVLSEMTGNNVGYTFEV  106 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH---------HHTC-SEEECGGGCSSCHHHHHHHHHTSCCCEEEEC
T ss_pred             CCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHH---------hcCC-cEEECccccchHHHHHHHHhccccceEEEEe
Confidence            45889999999999998 58999999887732110         1111 12221 12211 3344444555689999999


Q ss_pred             CCCChhhhHHHHHhCC-CCCeEEEee
Q 025702           80 NGREADEVEPILDALP-NLEQFIYCS  104 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~-~~~~~i~~S  104 (249)
                      .+.. ......+..+. +..+++.++
T Consensus       107 ~g~~-~~~~~a~~~~~~~~G~~v~vG  131 (176)
T d1d1ta2         107 IGHL-ETMIDALASCHMNYGTSVVVG  131 (176)
T ss_dssp             SCCH-HHHHHHHTTSCTTTCEEEECS
T ss_pred             CCch-HHHHHHHHHhhcCCeEEEEEE
Confidence            8862 23344444554 557888777

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.53  E-value=0.079  Score=35.56  Aligned_cols=72  Identities=10%  Similarity=-0.036  Sum_probs=52.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|.+|+.+++.|...|-+|++...+|....+.           ...+.++.        .+++++.  ..|+|+-+.+.
T Consensus        31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A-----------~~dG~~v~--------~~~~a~~--~adivvtaTGn   89 (163)
T d1li4a1          31 GYGDVGKGCAQALRGFGARVIITEIDPINALQA-----------AMEGYEVT--------TMDEACQ--EGNIFVTTTGC   89 (163)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTCEEC--------CHHHHTT--TCSEEEECSSC
T ss_pred             ccccccHHHHHHHHhCCCeeEeeecccchhHHh-----------hcCceEee--------ehhhhhh--hccEEEecCCC
Confidence            679999999999999999999999987653211           12233322        3445565  88999988887


Q ss_pred             ChhhhHHHHHhCC
Q 025702           83 EADEVEPILDALP   95 (249)
Q Consensus        83 ~~~~~~~~~~a~~   95 (249)
                      ...-...-++.++
T Consensus        90 ~~vI~~eh~~~MK  102 (163)
T d1li4a1          90 IDIILGRHFEQMK  102 (163)
T ss_dssp             SCSBCHHHHTTCC
T ss_pred             ccchhHHHHHhcc
Confidence            6566777777777

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=90.34  E-value=0.024  Score=38.90  Aligned_cols=18  Identities=22%  Similarity=0.169  Sum_probs=16.4

Q ss_pred             CCCcccchHHHHHHHHHc
Q 025702            1 MGGTRFIGVFLSRLLVKE   18 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~   18 (249)
                      +||+|.+|++++..|.+.
T Consensus        30 ~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          30 SGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             ETTTSHHHHHHHHHHHHT
T ss_pred             ECCCcHHHHHHHHHHHcC
Confidence            699999999999999875

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.09  E-value=0.15  Score=32.02  Aligned_cols=29  Identities=24%  Similarity=0.387  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          29 GGGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCCccceeeeeeecccccEEEEEEeccee
Confidence            56999999999999999999999998764

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.08  E-value=0.29  Score=32.63  Aligned_cols=89  Identities=11%  Similarity=0.058  Sum_probs=51.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhh-hCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLS-AKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~-~~~~d~Vi~~~~   81 (249)
                      |+|.+|...+..+...|.+|+++++++.+....         .+.+. -+++  |..+.+..+.+.+ ..+.+.++.+++
T Consensus        35 GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a---------~~~Ga-~~~i--~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          35 GIGGLGHVAVQYARAMGLHVAAIDIDDAKLELA---------RKLGA-SLTV--NARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---------HHTTC-SEEE--ETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             eccccHHHHHHHHHHcCCccceecchhhHHHhh---------hccCc-cccc--cccchhHHHHHHHhhcCCcccccccc
Confidence            458899999998888899999999987663211         11111 1222  4443333222221 125666666655


Q ss_pred             CChhhhHHHHHhCCCCCeEEEee
Q 025702           82 READEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        82 ~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      . .......++.++...+++.++
T Consensus       103 ~-~~~~~~~~~~l~~~G~iv~~G  124 (166)
T d1llua2         103 S-NSAFGQAIGMARRGGTIALVG  124 (166)
T ss_dssp             C-HHHHHHHHTTEEEEEEEEECC
T ss_pred             c-chHHHHHHHHhcCCcEEEEEE
Confidence            4 344555666666445777665

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=89.97  E-value=0.1  Score=34.12  Aligned_cols=72  Identities=13%  Similarity=0.034  Sum_probs=41.8

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      +|+ |.+|++++..|...+  .++..++.++......... .............+...  .|.+    .++  ++|+|+-
T Consensus         6 IGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d-~~~~~~~~~~~~~i~~~--~~~~----~~~--dadvvvi   75 (142)
T d1guza1           6 IGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALD-MYESGPVGLFDTKVTGS--NDYA----DTA--NSDIVII   75 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHH-HHTTHHHHTCCCEEEEE--SCGG----GGT--TCSEEEE
T ss_pred             ECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhh-hhcccchhcccceEEec--CCHH----Hhc--CCeEEEE
Confidence            475 999999999999987  5899999887652110000 00000001123333322  2232    244  9999999


Q ss_pred             cCCC
Q 025702           79 INGR   82 (249)
Q Consensus        79 ~~~~   82 (249)
                      ++|.
T Consensus        76 tag~   79 (142)
T d1guza1          76 TAGL   79 (142)
T ss_dssp             CCSC
T ss_pred             EEec
Confidence            9885

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=89.84  E-value=0.58  Score=31.45  Aligned_cols=90  Identities=13%  Similarity=0.039  Sum_probs=54.2

Q ss_pred             cccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC--HHHHHHhhhhCCCcEEEecC
Q 025702            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD--YDFVKSSLSAKGFDVVYDIN   80 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d--~~~l~~~~~~~~~d~Vi~~~   80 (249)
                      .|-+|...++.+...|. +|+++++++.+.....         + ..-..++...-.|  .+.........++|+||.+.
T Consensus        36 aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~---------~-lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~  105 (174)
T d1p0fa2          36 LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI---------E-LGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA  105 (174)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH---------H-TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCchhHHHHHHHHHcCCceeeccCChHHHHHHHH---------H-cCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcC
Confidence            48899999999998885 7888888776632110         1 1112222111122  23344444445899999998


Q ss_pred             CCChhhhHHHHHhCC-CCCeEEEee
Q 025702           81 GREADEVEPILDALP-NLEQFIYCS  104 (249)
Q Consensus        81 ~~~~~~~~~~~~a~~-~~~~~i~~S  104 (249)
                      +. .......+..++ +..+++.++
T Consensus       106 g~-~~~~~~~~~~~~~~~G~~v~vG  129 (174)
T d1p0fa2         106 GR-IETMMNALQSTYCGSGVTVVLG  129 (174)
T ss_dssp             CC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred             CC-chHHHHHHHHHHHhcCceEEEE
Confidence            86 344555666665 456777766

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=88.91  E-value=0.073  Score=35.71  Aligned_cols=30  Identities=10%  Similarity=0.158  Sum_probs=24.9

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~   31 (249)
                      +| .|.+|+.++..|...|.  ++..+++++..
T Consensus        26 IG-aG~VG~~~A~~l~~~~l~~ElvLiD~~~~~   57 (160)
T d1i0za1          26 VG-VGQVGMACAISILGKSLADELALVDVLEDK   57 (160)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             EC-CCHHHHHHHHHHHhcCCCcEEEEEEeccch
Confidence            36 49999999999999985  88888887544

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.81  E-value=0.2  Score=33.24  Aligned_cols=28  Identities=14%  Similarity=0.186  Sum_probs=22.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|.+|..+++.|++.|+.+ +..|++.+
T Consensus         7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           7 GLGAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CCSTTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eHHHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            57999999999999988865 56676654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.58  E-value=0.17  Score=32.03  Aligned_cols=29  Identities=38%  Similarity=0.536  Sum_probs=26.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        39 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~l   67 (122)
T d1xhca2          39 GGGFIGLELAGNLAEAGYHVKLIHRGAMF   67 (122)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred             CCcHHHHHHHHHhhcccceEEEEeccccc
Confidence            67999999999999999999999987643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=88.55  E-value=0.45  Score=31.88  Aligned_cols=76  Identities=14%  Similarity=0.194  Sum_probs=44.6

Q ss_pred             CcccchHHHHHHHHHc-CCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKE-GHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|++|+.+++.|.+. +.+++++.........               .....  ..   +.+....+  ++|+|+.+.+
T Consensus        10 G~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---------------~~~~~--~~---~~~~~~~~--~~D~Vvi~tp   67 (170)
T d1f06a1          10 GYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---------------KTPVF--DV---ADVDKHAD--DVDVLFLCMG   67 (170)
T ss_dssp             CCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---------------SSCEE--EG---GGGGGTTT--TCSEEEECSC
T ss_pred             CChHHHHHHHHHHHhCCCcEEEEEEeccccccc---------------ccccc--cc---hhhhhhcc--ccceEEEeCC
Confidence            5799999999999886 5787766654433211               11111  11   12233444  8999998776


Q ss_pred             CChhhhHHHHHhCCCCCeEE
Q 025702           82 READEVEPILDALPNLEQFI  101 (249)
Q Consensus        82 ~~~~~~~~~~~a~~~~~~~i  101 (249)
                      .. ....-+..+++..+++|
T Consensus        68 ~~-~h~~~a~~aL~aG~~vv   86 (170)
T d1f06a1          68 SA-TDIPEQAPKFAQFACTV   86 (170)
T ss_dssp             TT-THHHHHHHHHTTTSEEE
T ss_pred             Cc-ccHHHHHHHHHCCCcEE
Confidence            54 33444555566434555

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.41  E-value=0.23  Score=31.23  Aligned_cols=29  Identities=24%  Similarity=0.339  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        29 G~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          29 GAGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            56999999999999999999999998765

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.27  E-value=0.27  Score=32.53  Aligned_cols=19  Identities=16%  Similarity=0.038  Sum_probs=16.6

Q ss_pred             CCCcccchHHHHHHHHHcC
Q 025702            1 MGGTRFIGVFLSRLLVKEG   19 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g   19 (249)
                      +||+|.+|++++..|.+.+
T Consensus         9 iGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           9 TGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             SSTTSHHHHTTHHHHHTTT
T ss_pred             ECCCCHHHHHHHHHHHHHH
Confidence            6999999999999998653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=88.15  E-value=1.8  Score=30.68  Aligned_cols=104  Identities=13%  Similarity=0.113  Sum_probs=62.2

Q ss_pred             CcccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCC--------------CchhhhhccCceEEEEeccC-CHHHHHH
Q 025702            3 GTRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGE--------------SDQEFAEFSSKILHLKGDRK-DYDFVKS   66 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~~~d~~-d~~~l~~   66 (249)
                      |.|-+|++++..|...|. ++++++.+.-.........              ....+....+.+++...+.. +.+....
T Consensus        37 G~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~~~~~~~~  116 (247)
T d1jw9b_          37 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAA  116 (247)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhhhhccccc
Confidence            457799999999999996 6777775554421111100              01234455666766665543 4555666


Q ss_pred             hhhhCCCcEEEecCCCChhhhHHHHH-hCC-CCCeEEEeecccccc
Q 025702           67 SLSAKGFDVVYDINGREADEVEPILD-ALP-NLEQFIYCSSAGVYL  110 (249)
Q Consensus        67 ~~~~~~~d~Vi~~~~~~~~~~~~~~~-a~~-~~~~~i~~Ss~~v~~  110 (249)
                      .+.  .+|+|+.+...  ...+.++. ++. ...++|+.+..+.+|
T Consensus       117 ~~~--~~divid~~d~--~~~~~~in~~~~~~~ip~i~g~~~~~~g  158 (247)
T d1jw9b_         117 LIA--EHDLVLDCTDN--VAVRNQLNAGCFAAKVPLVSGAAIRMEG  158 (247)
T ss_dssp             HHH--TSSEEEECCSS--HHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred             ccc--ccceeeeccch--hhhhhhHHHHHHHhCCCccccccccccc
Confidence            676  89999987654  33343443 354 445788766555444

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=88.09  E-value=0.19  Score=31.55  Aligned_cols=29  Identities=28%  Similarity=0.497  Sum_probs=26.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        29 GgG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          29 GSGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCchHHHHHHHHHHhccccceeeehhccc
Confidence            56999999999999999999999998754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.03  E-value=0.19  Score=31.38  Aligned_cols=29  Identities=28%  Similarity=0.334  Sum_probs=26.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        28 GgG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          28 GGGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            67999999999999999999999998655

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.93  E-value=0.22  Score=31.53  Aligned_cols=26  Identities=23%  Similarity=0.443  Sum_probs=24.1

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRG   28 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~   28 (249)
                      |.|++|-.++..|.+.|.+|+++.|+
T Consensus        27 GgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          27 GASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCccHHHHHHHHhhcCCeEEEEEec
Confidence            56999999999999999999999875

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.89  E-value=0.23  Score=31.03  Aligned_cols=29  Identities=34%  Similarity=0.516  Sum_probs=26.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|-.++..|.+.|.+|.++.|.+..
T Consensus        28 GgG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          28 GAGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCChhhHHHHHHhhccccEEEEEeecchh
Confidence            67999999999999999999999998754

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=87.75  E-value=0.25  Score=31.45  Aligned_cols=85  Identities=9%  Similarity=0.056  Sum_probs=51.5

Q ss_pred             CcccchHHHHHHHHH-cCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCC
Q 025702            3 GTRFIGVFLSRLLVK-EGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDING   81 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~   81 (249)
                      |+|.+|+.|++++.. .+|+++++..+........           -.++.++  +   .+.+.++.+ ...+.++-+..
T Consensus        10 GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~-----------I~Gi~V~--~---~~~l~~~~~-~~i~iai~~i~   72 (126)
T d2dt5a2          10 GMGRLGSALADYPGFGESFELRGFFDVDPEKVGRP-----------VRGGVIE--H---VDLLPQRVP-GRIEIALLTVP   72 (126)
T ss_dssp             CCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE-----------ETTEEEE--E---GGGHHHHST-TTCCEEEECSC
T ss_pred             cCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE-----------ECCEEEe--c---HHHHHHHHh-hcccEEEEeCC
Confidence            579999999998764 3688888776544321111           2466654  2   344556555 35666555544


Q ss_pred             CChhhhHHHHHhCC--CCCeEEEeecc
Q 025702           82 READEVEPILDALP--NLEQFIYCSSA  106 (249)
Q Consensus        82 ~~~~~~~~~~~a~~--~~~~~i~~Ss~  106 (249)
                        ....+.+++.|.  +++.+..++..
T Consensus        73 --~~~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          73 --REAAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             --HHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             --HHHHHHHHHHHHHcCCCEEeecCce
Confidence              355666777765  77766665543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=87.71  E-value=0.064  Score=35.44  Aligned_cols=30  Identities=17%  Similarity=0.349  Sum_probs=24.2

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~   31 (249)
                      +| .|.+|..++..|+.+|  .++..++.++..
T Consensus         7 IG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~   38 (146)
T d1hyha1           7 IG-LGNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (146)
T ss_dssp             EC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             EC-cCHHHHHHHHHHHhcCCCceEEEEecccch
Confidence            46 5999999999999887  478888876544

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.21  E-value=0.36  Score=31.00  Aligned_cols=29  Identities=24%  Similarity=0.391  Sum_probs=26.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|++|-.++..|.+.|.+|.++.+.+..
T Consensus        42 GgG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          42 GGGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCchHHHHHHHHHHhhCcceeeeeecccc
Confidence            56999999999999999999999998765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.10  E-value=0.27  Score=31.18  Aligned_cols=29  Identities=24%  Similarity=0.424  Sum_probs=26.4

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|-.++..|.+.|.+|+++.|++.-
T Consensus        29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          29 GAGYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             cCCccHHHHHHHHhcCCcEEEEEeecccc
Confidence            56999999999999999999999998654

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.00  E-value=0.36  Score=30.83  Aligned_cols=80  Identities=11%  Similarity=0.048  Sum_probs=51.5

Q ss_pred             CCCc---ccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEE
Q 025702            1 MGGT---RFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVV   76 (249)
Q Consensus         1 ~G~t---G~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~V   76 (249)
                      +|+|   +..|..+.+.|++.| ++|+.+..+....                .++. .+-++.|      +-.  .+|.+
T Consensus        14 VGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i----------------~G~~-~y~sl~d------lp~--~vDlv   68 (129)
T d2csua1          14 IGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV----------------QGVK-AYKSVKD------IPD--EIDLA   68 (129)
T ss_dssp             ETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE----------------TTEE-CBSSTTS------CSS--CCSEE
T ss_pred             EccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc----------------CCeE-eecchhh------cCC--CCceE
Confidence            3676   789999999988766 6888887654331                1221 1223333      222  78988


Q ss_pred             EecCCCChhhhHHHHHhCC--CCCeEEEeeccc
Q 025702           77 YDINGREADEVEPILDALP--NLEQFIYCSSAG  107 (249)
Q Consensus        77 i~~~~~~~~~~~~~~~a~~--~~~~~i~~Ss~~  107 (249)
                      +-+..  ...+..+++.+.  +++.++.+|+..
T Consensus        69 vi~vp--~~~~~~~~~~~~~~g~~~~vi~s~Gf   99 (129)
T d2csua1          69 IIVVP--KRFVKDTLIQCGEKGVKGVVIITAGF   99 (129)
T ss_dssp             EECSC--HHHHHHHHHHHHHHTCCEEEECCCSS
T ss_pred             EEecC--hHHhHHHHHHHHHcCCCEEEEecccc
Confidence            86665  466666777755  888888887643

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=86.93  E-value=0.23  Score=32.38  Aligned_cols=30  Identities=17%  Similarity=0.320  Sum_probs=24.2

Q ss_pred             CCCcccchHHHHHHHHHcC-CeEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEG-HQVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~   31 (249)
                      +|+ |.+|.+++..|..++ .++..++.++..
T Consensus         7 IGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~   37 (142)
T d1uxja1           7 IGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV   37 (142)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred             ECC-CHHHHHHHHHHHhCCcceEEEEeecccc
Confidence            364 999999999998887 488888877654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=86.92  E-value=1.2  Score=29.61  Aligned_cols=90  Identities=17%  Similarity=0.137  Sum_probs=52.2

Q ss_pred             CCcccchHHHHHHHHHcC-CeEEEEecCCCccccCCCCCCchhhhhccCceEEEE--eccCC-HHHHHHhhhhCCCcEEE
Q 025702            2 GGTRFIGVFLSRLLVKEG-HQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK--GDRKD-YDFVKSSLSAKGFDVVY   77 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~d~~d-~~~l~~~~~~~~~d~Vi   77 (249)
                      |+ |-+|...+..+...| .+|+++++++.+.....           ..+...+.  .+-.+ .+.........++|+||
T Consensus        36 Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-----------~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vi  103 (176)
T d2jhfa2          36 GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-----------EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF  103 (176)
T ss_dssp             CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-----------HhCCeeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence            66 458999999988887 58888888877632111           11222222  12222 33444444445899999


Q ss_pred             ecCCCChhhhHHHHHhCC-CCCeEEEee
Q 025702           78 DINGREADEVEPILDALP-NLEQFIYCS  104 (249)
Q Consensus        78 ~~~~~~~~~~~~~~~a~~-~~~~~i~~S  104 (249)
                      .+.+.. ......+..++ +...++..+
T Consensus       104 d~~G~~-~~~~~a~~~~~~~~g~~~~~~  130 (176)
T d2jhfa2         104 EVIGRL-DTMVTALSCCQEAYGVSVIVG  130 (176)
T ss_dssp             ECSCCH-HHHHHHHHHBCTTTCEEEECS
T ss_pred             ecCCch-hHHHHHHHHHhcCCcceEEec
Confidence            998862 33455566666 444444433

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.54  E-value=0.66  Score=29.98  Aligned_cols=74  Identities=9%  Similarity=-0.001  Sum_probs=45.2

Q ss_pred             CCc---ccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEe
Q 025702            2 GGT---RFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYD   78 (249)
Q Consensus         2 G~t---G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~   78 (249)
                      |++   +..|..+++.|++.||+|+.+.-.....                .+... .-+      +.++-.  .+|.|+-
T Consensus        26 GaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i----------------~G~~~-~~s------l~dlp~--~iD~v~i   80 (139)
T d2d59a1          26 GASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV----------------LGRKC-YPS------VLDIPD--KIEVVDL   80 (139)
T ss_dssp             TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEEC-BSS------GGGCSS--CCSEEEE
T ss_pred             eecCCCCCchHHHHHHHHHCCCEEEEECCccccc----------------CCCcc-ccc------ccccCc--cceEEEE
Confidence            555   6789999999999999988886543221                12211 112      223333  6788776


Q ss_pred             cCCCChhhhHHHHHhCC--CCCeEEE
Q 025702           79 INGREADEVEPILDALP--NLEQFIY  102 (249)
Q Consensus        79 ~~~~~~~~~~~~~~a~~--~~~~~i~  102 (249)
                      +..  ......+++.+.  +.+.+++
T Consensus        81 ~vp--~~~~~~~~~e~~~~g~k~v~~  104 (139)
T d2d59a1          81 FVK--PKLTMEYVEQAIKKGAKVVWF  104 (139)
T ss_dssp             CSC--HHHHHHHHHHHHHHTCSEEEE
T ss_pred             EeC--HHHHHHHHHHHHHhCCCEEEE
Confidence            655  456666666654  6665544

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.52  E-value=0.47  Score=30.76  Aligned_cols=67  Identities=22%  Similarity=0.286  Sum_probs=40.8

Q ss_pred             CCCcccchHHHHHHHHHcC--CeEEEEecCCCccccCCCCCCchhhhh---ccCceEEEEeccCCHHHHHHhhhhCCCcE
Q 025702            1 MGGTRFIGVFLSRLLVKEG--HQVTLFTRGKAPIAQQLPGESDQEFAE---FSSKILHLKGDRKDYDFVKSSLSAKGFDV   75 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~d~~d~~~l~~~~~~~~~d~   75 (249)
                      +|+ |.+|++++..|+.++  .++..++.++......     ..++..   ..........|.   +    .++  ++|+
T Consensus         6 IGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~-----~~Dl~~~~~~~~~~~~~~~~~---~----~~~--~adi   70 (140)
T d1a5za1           6 VGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGD-----ALDLIHGTPFTRRANIYAGDY---A----DLK--GSDV   70 (140)
T ss_dssp             ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHH-----HHHHHHHGGGSCCCEEEECCG---G----GGT--TCSE
T ss_pred             ECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccch-----hccccccccccccccccCCcH---H----Hhc--CCCE
Confidence            365 999999999999887  5888888776442110     001111   122334333332   2    244  8999


Q ss_pred             EEecCCC
Q 025702           76 VYDINGR   82 (249)
Q Consensus        76 Vi~~~~~   82 (249)
                      |+-+++.
T Consensus        71 vvitag~   77 (140)
T d1a5za1          71 VIVAAGV   77 (140)
T ss_dssp             EEECCCC
T ss_pred             EEEeccc
Confidence            9999876

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.43  E-value=0.26  Score=31.16  Aligned_cols=29  Identities=21%  Similarity=0.360  Sum_probs=26.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|-.++..|.+.|.+|+++.|++..
T Consensus        32 G~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          32 GAGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             ccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            56999999999999999999999999776

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=86.33  E-value=0.54  Score=30.87  Aligned_cols=29  Identities=28%  Similarity=0.315  Sum_probs=24.1

Q ss_pred             CCCcccchHHHHHHHHHc--CCeEEEEecCC
Q 025702            1 MGGTRFIGVFLSRLLVKE--GHQVTLFTRGK   29 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~--g~~v~~~~r~~   29 (249)
                      +|+||.||+...+-+.+.  .++|.+++-+.
T Consensus         8 lGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           8 LGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             ETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             ECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            599999999999999875  47888887654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=86.07  E-value=0.16  Score=35.06  Aligned_cols=75  Identities=16%  Similarity=0.263  Sum_probs=46.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCcccc---------CCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQ---------QLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGF   73 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~---------~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~   73 (249)
                      |+|..|++++..|.+.|++|.+.+|+++....         .++.      ..+..++.+       ...+.++++  +.
T Consensus        14 GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~------~~l~~~i~~-------t~~l~~a~~--~a   78 (189)
T d1n1ea2          14 GSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKG------VQLASNITF-------TSDVEKAYN--GA   78 (189)
T ss_dssp             CCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTT------CBCCTTEEE-------ESCHHHHHT--TC
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccc------ccccccccc-------chhhhhccC--CC
Confidence            56999999999999999999999997654210         0110      001123321       224556676  88


Q ss_pred             cEEEecCCCChhhhHHHHHhC
Q 025702           74 DVVYDINGREADEVEPILDAL   94 (249)
Q Consensus        74 d~Vi~~~~~~~~~~~~~~~a~   94 (249)
                      |.|+.+..  ....+.+++.+
T Consensus        79 d~iiiavP--s~~~~~~~~~~   97 (189)
T d1n1ea2          79 EIILFVIP--TQFLRGFFEKS   97 (189)
T ss_dssp             SCEEECSC--HHHHHHHHHHH
T ss_pred             CEEEEcCc--HHHHHHHHHHH
Confidence            99987665  34555555543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.04  E-value=0.72  Score=30.48  Aligned_cols=87  Identities=9%  Similarity=0.073  Sum_probs=52.7

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEEec
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi~~   79 (249)
                      |+|-+|...+..+...|.+|+++++++.+....         .  .-++..+. |..+   .+.+.....  +.+.+|.+
T Consensus        35 G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~---------k--~~Ga~~~~-~~~~~~~~~~~~~~~~--~~~~~v~~  100 (168)
T d1rjwa2          35 GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA---------K--ELGADLVV-NPLKEDAAKFMKEKVG--GVHAAVVT  100 (168)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH---------H--HTTCSEEE-CTTTSCHHHHHHHHHS--SEEEEEES
T ss_pred             ecccchhhhhHHHhcCCCeEeccCCCHHHhhhh---------h--hcCcceec-ccccchhhhhcccccC--CCceEEee
Confidence            568899999988888999999999887663110         1  12333332 2322   233444443  66666666


Q ss_pred             CCCChhhhHHHHHhCCCCCeEEEee
Q 025702           80 NGREADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        80 ~~~~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                      ++. .......++.++...+++.++
T Consensus       101 ~~~-~~~~~~a~~~l~~~G~i~~~g  124 (168)
T d1rjwa2         101 AVS-KPAFQSAYNSIRRGGACVLVG  124 (168)
T ss_dssp             SCC-HHHHHHHHHHEEEEEEEEECC
T ss_pred             cCC-HHHHHHHHHHhccCCceEecc
Confidence            653 455666777777445666554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=85.82  E-value=0.29  Score=32.72  Aligned_cols=29  Identities=17%  Similarity=0.368  Sum_probs=24.7

Q ss_pred             CcccchHHHHHHHHHcCC--eEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~   31 (249)
                      |.|.+|..+++.|.+.|+  +|++.++++..
T Consensus         8 G~G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           8 GVGFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             SCSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             ccCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            569999999999999985  78888887654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.81  E-value=0.3  Score=31.04  Aligned_cols=29  Identities=14%  Similarity=0.233  Sum_probs=26.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |.|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        33 GgG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          33 GGGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             SCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            56999999999999999999999998755

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.18  E-value=0.34  Score=35.80  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=25.5

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKA   30 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~   30 (249)
                      .||..|.+|+++|+.+|++|+.+++..+
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            5899999999999999999999987754

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.96  E-value=0.66  Score=31.89  Aligned_cols=89  Identities=13%  Similarity=0.040  Sum_probs=52.1

Q ss_pred             cccchHHHHHHHHHcCC-eEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC---HHHHHHhhhhCCCcEEEec
Q 025702            4 TRFIGVFLSRLLVKEGH-QVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD---YDFVKSSLSAKGFDVVYDI   79 (249)
Q Consensus         4 tG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d---~~~l~~~~~~~~~d~Vi~~   79 (249)
                      +|-+|...+..+...|. +|+++++++.+....         .  .-+...+. |..+   .+.+.++....++|++|.+
T Consensus        34 aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a---------~--~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~  101 (195)
T d1kola2          34 AGPVGLAAAASARLLGAAVVIVGDLNPARLAHA---------K--AQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDA  101 (195)
T ss_dssp             CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH---------H--HTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred             cCHHHHHHHHHHHhhcccceeeecccchhhHhh---------h--hccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence            48899888877777775 788888876552111         1  12344332 3333   2445555555689999999


Q ss_pred             CCCCh--------------hhhHHHHHhCCCCCeEEEee
Q 025702           80 NGREA--------------DEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        80 ~~~~~--------------~~~~~~~~a~~~~~~~i~~S  104 (249)
                      .|...              ......++.++...+++.++
T Consensus       102 vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G  140 (195)
T d1kola2         102 VGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG  140 (195)
T ss_dssp             CCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred             ccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEee
Confidence            87431              23444555566444666554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=83.43  E-value=0.13  Score=34.53  Aligned_cols=89  Identities=12%  Similarity=0.142  Sum_probs=62.2

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |.|-.|..-++.....|..|.+++.+.......        ...+...++..   ..+.+.+.+.++  ++|+||.++-.
T Consensus        39 GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l--------~~~~~~~~~~~---~~~~~~l~~~~~--~aDivI~aali  105 (168)
T d1pjca1          39 GGGVVGTEAAKMAVGLGAQVQIFDINVERLSYL--------ETLFGSRVELL---YSNSAEIETAVA--EADLLIGAVLV  105 (168)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGSEEE---ECCHHHHHHHHH--TCSEEEECCCC
T ss_pred             CCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHH--------HHhhcccceee---hhhhhhHHHhhc--cCcEEEEeeec
Confidence            458899999999999999999999987653210        01112344433   356778888888  99999988653


Q ss_pred             -----ChhhhHHHHHhCCCCCeEEEee
Q 025702           83 -----EADEVEPILDALPNLEQFIYCS  104 (249)
Q Consensus        83 -----~~~~~~~~~~a~~~~~~~i~~S  104 (249)
                           ...-++.+++.++.-.-+|=++
T Consensus       106 pG~~aP~lIt~~mv~~Mk~GSVIVDva  132 (168)
T d1pjca1         106 PGRRAPILVPASLVEQMRTGSVIVDVA  132 (168)
T ss_dssp             TTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred             CCcccCeeecHHHHhhcCCCcEEEEee
Confidence                 2345788888888444566555

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=82.65  E-value=0.57  Score=31.74  Aligned_cols=27  Identities=15%  Similarity=0.221  Sum_probs=21.8

Q ss_pred             CcccchHHHHHHHHHcC-CeEEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEG-HQVTLFTRGK   29 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g-~~v~~~~r~~   29 (249)
                      |.|.||+.+++.|.+++ .+|+++....
T Consensus         8 GfGRIGR~v~Ral~~~~dievVaInd~~   35 (178)
T d1b7go1           8 GYGTIGKRVADAIIKQPDMKLVGVAKTS   35 (178)
T ss_dssp             CCSHHHHHHHHHHHTCTTEEEEEEECSS
T ss_pred             CCCHHHHHHHHHHHhCCCCEEEEEECCC
Confidence            46889999999999874 7888886543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.55  E-value=0.75  Score=30.50  Aligned_cols=30  Identities=13%  Similarity=0.247  Sum_probs=24.4

Q ss_pred             CCCcccchHHHHHHHHHcCC--eEEEEecCCCc
Q 025702            1 MGGTRFIGVFLSRLLVKEGH--QVTLFTRGKAP   31 (249)
Q Consensus         1 ~G~tG~iG~~l~~~L~~~g~--~v~~~~r~~~~   31 (249)
                      +| .|.+|++++..|...|.  ++..+++++..
T Consensus        25 IG-aG~VG~~~A~~l~~~~l~~elvL~D~~~~~   56 (159)
T d2ldxa1          25 VG-VGDVGMACAISILLKGLADELALVDADTDK   56 (159)
T ss_dssp             EC-CSHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred             EC-CCHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            36 49999999999999874  78888877544

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=80.64  E-value=0.76  Score=28.58  Aligned_cols=29  Identities=14%  Similarity=0.200  Sum_probs=26.6

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCc
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAP   31 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~   31 (249)
                      |+|++|-.++..|.+.|.+|.++.|.+.-
T Consensus        29 GgG~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          29 GGSKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCCHHHHHHHHHHHhcchhheEeeccchh
Confidence            67999999999999999999999998654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=80.57  E-value=0.54  Score=33.83  Aligned_cols=27  Identities=33%  Similarity=0.562  Sum_probs=25.0

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGK   29 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~   29 (249)
                      |+|..|..++.+|.++|++|+++.+..
T Consensus        11 GaGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1          11 GGGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            569999999999999999999999875

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=80.51  E-value=1.9  Score=31.79  Aligned_cols=65  Identities=20%  Similarity=0.246  Sum_probs=41.3

Q ss_pred             CCcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCC----------HHHHHHhhhhC
Q 025702            2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD----------YDFVKSSLSAK   71 (249)
Q Consensus         2 G~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d----------~~~l~~~~~~~   71 (249)
                      ||.+-.-..++++|.++||+|.++++.....   .           ..+++++......          ...+...++..
T Consensus        13 GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (370)
T d2iw1a1          13 GGLQRDFMRIASTVAARGHHVRVYTQSWEGD---C-----------PKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEH   78 (370)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCEEEEESEECSC---C-----------CTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEecCCCCC---C-----------CCceEEEEcCccccccchhhHHHHHHHHHHHHhc
Confidence            6666666788999999999999998754331   1           2355555554432          11233444556


Q ss_pred             CCcEEEecC
Q 025702           72 GFDVVYDIN   80 (249)
Q Consensus        72 ~~d~Vi~~~   80 (249)
                      .+|.|++..
T Consensus        79 ~~d~v~~~~   87 (370)
T d2iw1a1          79 PADRVVGFN   87 (370)
T ss_dssp             CCSEEEESS
T ss_pred             ccceeeecc
Confidence            899888653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=80.29  E-value=0.42  Score=31.81  Aligned_cols=72  Identities=11%  Similarity=-0.078  Sum_probs=52.9

Q ss_pred             CcccchHHHHHHHHHcCCeEEEEecCCCccccCCCCCCchhhhhccCceEEEEeccCCHHHHHHhhhhCCCcEEEecCCC
Q 025702            3 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGR   82 (249)
Q Consensus         3 ~tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~d~~~l~~~~~~~~~d~Vi~~~~~   82 (249)
                      |=|++|+.+++.|...|.+|+++..+|-...+.           ...++++        ..++++++  ..|++|-+.|.
T Consensus        30 GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA-----------~mdGf~v--------~~~~~a~~--~aDi~vTaTGn   88 (163)
T d1v8ba1          30 GYGDVGKGCASSMKGLGARVYITEIDPICAIQA-----------VMEGFNV--------VTLDEIVD--KGDFFITCTGN   88 (163)
T ss_dssp             CCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-----------HTTTCEE--------CCHHHHTT--TCSEEEECCSS
T ss_pred             cccccchhHHHHHHhCCCEEEEEecCchhhHHH-----------HhcCCcc--------CchhHccc--cCcEEEEcCCC
Confidence            458999999999999999999999998663221           1234443        23456666  88999988887


Q ss_pred             ChhhhHHHHHhCC
Q 025702           83 EADEVEPILDALP   95 (249)
Q Consensus        83 ~~~~~~~~~~a~~   95 (249)
                      ...-...-++.++
T Consensus        89 ~~vI~~~h~~~MK  101 (163)
T d1v8ba1          89 VDVIKLEHLLKMK  101 (163)
T ss_dssp             SSSBCHHHHTTCC
T ss_pred             CccccHHHHHHhh
Confidence            6556677777777