Citrus Sinensis ID: 025709

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK
cccccccccEEECcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccEEEEEEEEEEcccccEECccccEEEcccHHHHHHcccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccHHHcHHHHHHHHHHHHHHccccEEEcccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccc
****SNA*SVLELDA***************************************************YKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT****
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MDGLSNAFSVLELDADDSQVKTPAAASSSSSSSSSCKSVESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Oligoribonuclease 3'-to-5' exoribonuclease specific for small oligoribonucleotides.probableQ9ZVE0
Oligoribonuclease, mitochondrial 3'-to-5' exoribonuclease specific for small oligoribonucleotides. Active on small (primarily </=5 nucleotides in length) single-stranded RNA and DNA oligomers. May have a role for cellular nucleotide recycling.probableQ9D8S4
Oligoribonuclease, mitochondrial 3'-to-5' exoribonuclease specific for small oligoribonucleotides. Active on small (primarily </=5 nucleotides in length) single-stranded RNA and DNA oligomers. May have a role for cellular nucleotide recycling.probableQ5U1X1

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TR8, chain A
Confidence level:very confident
Coverage over the Query: 65-245
View the alignment between query and template
View the model in PyMOL