Citrus Sinensis ID: 025878

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKAYDAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIEREHIKAIVLFLGCSTYFINKPIFPLDMR
cEEEcccccEEEEccHHHHHHHHHHcccccccccccccccHHccccccEEEccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHHHHcccc
ccEEcccccEEEEccHHHHHHHHHHcccHHccccccHHHHHHEEccccEEEccccHHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccEEcccccEEEEEEEccccccHHHHHHHHHHcc
MHLRLGLMTTIVVSSPQAAEQFLKTHDlifasrpplqaskYMSYQQknfamapygSYWRKVRKICTQNLLsnakinyfqPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVlgkkcsdyefderGFENVVQEGMEligkpnlgdyipqitglDLQGLTKRLKAVAKAYDAFLEKIIDEHvqskdenrtEDFVDVMLsfegsedtEKKIEREHIKAIVLFLgcstyfinkpifpldmr
MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKAYDAFLEKIIdehvqskdenrteDFVDVMLSFEGSEDTEKKIEREHIKAIVlflgcstyfinkpifpldmr
MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKAYDAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIEREHIKAIVLFLGCSTYFINKPIFPLDMR
****LGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKAYDAFLEKIIDEHV**********FVDVMLSF*********IEREHIKAIVLFLGCSTYFINKPIFP****
MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKE*****CVVDISAKLSALSANMTCRMVLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKAYDAFLEKII****************DVMLSFEGSE**EKKIEREHIKAIVLFLGCSTYFINKPIFPLDMR
MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKAYDAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIEREHIKAIVLFLGCSTYFINKPIFPLDMR
*HLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKAYDAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIEREHIKAIVLFLGCSTYFINKPIFPLDMR
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKAYDAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIEREHIKAIVLFLGCSTYFINKPIFPLDMR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query247 2.2.26 [Sep-21-2011]
Q50EK4 525 Cytochrome P450 750A1 OS= N/A no 0.919 0.432 0.415 9e-43
Q9LVD2 502 Cytochrome P450 71B10 OS= yes no 0.923 0.454 0.340 2e-37
Q9LIP6 500 Cytochrome P450 71B34 OS= no no 0.955 0.472 0.360 5e-37
Q9LIP5 500 Cytochrome P450 71B35 OS= no no 0.919 0.454 0.357 7e-37
P37118 505 Cytochrome P450 71A2 OS=S N/A no 0.906 0.443 0.348 4e-36
P24465 502 Cytochrome P450 71A1 OS=P N/A no 0.914 0.450 0.362 3e-35
O49340 497 Cytochrome P450 71A12 OS= no no 0.935 0.464 0.341 5e-35
Q9STL1 490 Cytochrome P450 71A22 OS= no no 0.890 0.448 0.353 6e-35
O49342 497 Indoleacetaldoxime dehydr no no 0.935 0.464 0.316 1e-34
Q9LIP4 500 Cytochrome P450 71B36 OS= no no 0.919 0.454 0.349 1e-34
>sp|Q50EK4|C75A1_PINTA Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1 Back     alignment and function desciption
 Score =  173 bits (439), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 144/238 (60%), Gaps = 11/238 (4%)

Query: 1   MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRK 60
           + LR G + T+VVSS + A+ FLKTHDLIFASRPP    KY  Y  K+ A +PYG +WRK
Sbjct: 77  LFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRK 136

Query: 61  VRKICTQNLLSNAKINYFQPIRKEELDLLI-DYFKEAARARCVVDISAKLSALSANMTCR 119
           +RKIC   LL++ +I  F+ +R+EEL  +I   ++E+   R  V++S  +S   AN+  R
Sbjct: 137 MRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWR 196

Query: 120 MVLGKKCSDYEF--DERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKA 177
           ++  KK SD +   D +GF ++V E    +G  N+GD+IP +  LDLQG+ + LK     
Sbjct: 197 ILARKKFSDNDLGADGKGFADLVVEVSIAVGSLNIGDFIPYLDCLDLQGIKRALKKANAR 256

Query: 178 YDAFLEKIIDEHVQSKDENRTE--------DFVDVMLSFEGSEDTEKKIEREHIKAIV 227
           +DAF EK+IDEH+ +      E        D +DV+L    +++T  K+ RE IKAI 
Sbjct: 257 FDAFAEKMIDEHINASTIRNGEADAGCHVKDIIDVLLEMAKNDNTGAKVTREIIKAIT 314

Pinus taeda (taxid: 3352)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|Q9LVD2|C71BA_ARATH Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1 Back     alignment and function description
>sp|Q9LIP6|C71BV_ARATH Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1 Back     alignment and function description
>sp|Q9LIP5|C71BW_ARATH Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1 Back     alignment and function description
>sp|P37118|C71A2_SOLME Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1 Back     alignment and function description
>sp|P24465|C71A1_PERAE Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=2 Back     alignment and function description
>sp|O49340|C71AC_ARATH Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1 Back     alignment and function description
>sp|Q9STL1|C71AM_ARATH Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1 Back     alignment and function description
>sp|O49342|C71AD_ARATH Indoleacetaldoxime dehydratase OS=Arabidopsis thaliana GN=CYP71A13 PE=1 SV=1 Back     alignment and function description
>sp|Q9LIP4|C71BX_ARATH Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query247
255582520 505 flavonoid 3-hydroxylase, putative [Ricin 0.923 0.451 0.697 7e-90
224093824 497 cytochrome P450 [Populus trichocarpa] gi 0.923 0.458 0.657 7e-84
356511127 536 PREDICTED: cytochrome P450 71A1-like [Gl 0.923 0.425 0.650 2e-83
224093840 497 cytochrome P450 [Populus trichocarpa] gi 0.923 0.458 0.649 7e-83
224093842 497 cytochrome P450 [Populus trichocarpa] gi 0.923 0.458 0.653 2e-81
224093838 497 cytochrome P450 [Populus trichocarpa] gi 0.923 0.458 0.653 3e-81
224093820296 cytochrome P450 [Populus trichocarpa] gi 0.923 0.770 0.614 6e-78
224093826 493 cytochrome P450 [Populus trichocarpa] gi 0.923 0.462 0.614 7e-77
225438595 498 PREDICTED: cytochrome P450 71A1 [Vitis v 0.923 0.457 0.585 2e-76
296082484 563 unnamed protein product [Vitis vinifera] 0.923 0.404 0.585 4e-76
>gi|255582520|ref|XP_002532045.1| flavonoid 3-hydroxylase, putative [Ricinus communis] gi|223528288|gb|EEF30335.1| flavonoid 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  335 bits (860), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 159/228 (69%), Positives = 191/228 (83%)

Query: 1   MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRK 60
           MHLRLGL++TIVVSSPQAAE FLKTHDL FASRPP QA+K++SY+QKN + APYGSYWR 
Sbjct: 74  MHLRLGLVSTIVVSSPQAAESFLKTHDLAFASRPPHQAAKFISYEQKNLSFAPYGSYWRN 133

Query: 61  VRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRM 120
           VRK+CT  LLSN K+N F+ +RKEELDLLID  K A+  R  VD+SAK+++LSA+M+CRM
Sbjct: 134 VRKMCTLELLSNVKVNSFKSMRKEELDLLIDCIKNASCQRVAVDLSAKVASLSADMSCRM 193

Query: 121 VLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAKAYDA 180
           V GKK  D EFDERGF+ V+QEGM L   PNLG+YIPQI GLDLQGLTKR+KAV+K +D+
Sbjct: 194 VFGKKYMDKEFDERGFKAVIQEGMHLGAAPNLGNYIPQIAGLDLQGLTKRMKAVSKVFDS 253

Query: 181 FLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIEREHIKAIVL 228
           F EKIIDEH++ KDENRT+DFVDVML F GSE +E  I R++IKAI+L
Sbjct: 254 FFEKIIDEHMEFKDENRTKDFVDVMLGFMGSEVSEYHIGRDNIKAIIL 301

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224093824|ref|XP_002310007.1| cytochrome P450 [Populus trichocarpa] gi|222852910|gb|EEE90457.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356511127|ref|XP_003524281.1| PREDICTED: cytochrome P450 71A1-like [Glycine max] Back     alignment and taxonomy information
>gi|224093840|ref|XP_002310015.1| cytochrome P450 [Populus trichocarpa] gi|222852918|gb|EEE90465.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224093842|ref|XP_002310016.1| cytochrome P450 [Populus trichocarpa] gi|222852919|gb|EEE90466.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224093838|ref|XP_002310014.1| cytochrome P450 [Populus trichocarpa] gi|222852917|gb|EEE90464.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224093820|ref|XP_002310005.1| cytochrome P450 [Populus trichocarpa] gi|222852908|gb|EEE90455.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224093826|ref|XP_002310008.1| cytochrome P450 [Populus trichocarpa] gi|222852911|gb|EEE90458.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225438595|ref|XP_002280620.1| PREDICTED: cytochrome P450 71A1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296082484|emb|CBI21489.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query247
TAIR|locus:2079251 500 CYP71B34 ""cytochrome P450, fa 0.943 0.466 0.365 2.1e-36
TAIR|locus:2165595 502 CYP71B10 ""cytochrome P450, fa 0.923 0.454 0.344 5.7e-36
TAIR|locus:2079306 500 CYP71B35 ""cytochrome P450, fa 0.919 0.454 0.362 1.2e-35
TAIR|locus:504955640 490 CYP71A22 ""cytochrome P450, fa 0.890 0.448 0.353 5.1e-35
TAIR|locus:2142075 497 CYP71A20 ""cytochrome P450, fa 0.939 0.466 0.333 5.8e-34
TAIR|locus:2093531 501 CYP71B23 ""cytochrome P450, fa 0.947 0.467 0.367 7.4e-34
TAIR|locus:504955642 490 CYP71A21 ""cytochrome P450, fa 0.890 0.448 0.362 1.2e-33
TAIR|locus:504955634 483 CYP71A23 ""cytochrome P450, fa 0.902 0.461 0.358 1.5e-33
TAIR|locus:2079316 500 CYP71B37 ""cytochrome P450, fa 0.919 0.454 0.331 2e-33
TAIR|locus:2079311 500 CYP71B36 ""cytochrome P450, fa 0.914 0.452 0.356 2.5e-33
TAIR|locus:2079251 CYP71B34 ""cytochrome P450, family 71, subfamily B, polypeptide 34"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 88/241 (36%), Positives = 136/241 (56%)

Query:     1 MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRK 60
             M L+LG + T++VSS + A+Q LK HDL   SRP    ++ +SY   + A +PY  YW++
Sbjct:    66 MLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKE 125

Query:    61 VRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRM 120
             VRK+  Q L S+ +++  QPI+ EE+  LID   E+A  +  ++++  L AL+ ++ CR 
Sbjct:   126 VRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRT 185

Query:   121 VLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGL-DL-QGLTKRLKAVAKAY 178
                        +   F N+V+E +E++G  +  D+IP +  + DL  GL  R +   +  
Sbjct:   186 AFSVNFEGTVLNSERFNNIVREALEMLGSFSASDFIPYVGRIIDLLTGLQGRRERSMRDL 245

Query:   179 DAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDT--EKKIEREHIKAI---VLFLGCS 233
             DAF E++ D H Q K+E  +EDFVD++L  E  E      K+ R HIKAI   VL  G  
Sbjct:   246 DAFYEQMFDLHKQKKEEG-SEDFVDLLLRLEKEEAVLGNDKLTRNHIKAILMDVLLAGMD 304

Query:   234 T 234
             T
Sbjct:   305 T 305
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2165595 CYP71B10 ""cytochrome P450, family 71, subfamily B, polypeptide 10"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079306 CYP71B35 ""cytochrome P450, family 71, subfamily B, polypeptide 35"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955640 CYP71A22 ""cytochrome P450, family 71, subfamily A, polypeptide 22"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142075 CYP71A20 ""cytochrome P450, family 71, subfamily A, polypeptide 20"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093531 CYP71B23 ""cytochrome P450, family 71, subfamily B, polypeptide 23"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955642 CYP71A21 ""cytochrome P450, family 71, subfamily A, polypeptide 21"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955634 CYP71A23 ""cytochrome P450, family 71, subfamily A, polypeptide 23"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079316 CYP71B37 ""cytochrome P450, family 71, subfamily B, polypeptide 37"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079311 CYP71B36 ""cytochrome P450, family 71, subfamily B, polypeptide 36"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 8e-48
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 4e-44
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 3e-41
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 2e-37
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 7e-37
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 6e-28
pfam00067 461 pfam00067, p450, Cytochrome P450 8e-23
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 9e-20
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 3e-10
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 1e-08
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 0.002
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information 
 Score =  164 bits (418), Expect = 8e-48
 Identities = 80/236 (33%), Positives = 127/236 (53%), Gaps = 9/236 (3%)

Query: 1   MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRK 60
           ++LRLG +  I    P+   + L   D +FASRP   A+ +++Y   + A+AP G +W++
Sbjct: 68  VYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKR 127

Query: 61  VRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRM 120
           +R+IC ++LL+  ++  F   R EE   LI    EAA+    V++   L A S N   RM
Sbjct: 128 MRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRM 187

Query: 121 VLGKK----CSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLDLQGLTKRLKAVAK 176
           +LGK+     S    +   F ++  E   L+G   LGDY+P    LD  G  K+++ V K
Sbjct: 188 LLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEK 247

Query: 177 AYDAFLEKIIDEHVQSKDENRTE----DFVDVMLSFEGSEDTEKKIEREHIKAIVL 228
             D F +KIIDEH +++          DFVDV+LS  G E+ ++ ++   IKA++ 
Sbjct: 248 RVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPG-ENGKEHMDDVEIKALMQ 302

Length = 514
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 247
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN02971 543 tryptophan N-hydroxylase 100.0
PLN02966 502 cytochrome P450 83A1 99.98
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.98
PLN02655 466 ent-kaurene oxidase 99.97
PLN02183 516 ferulate 5-hydroxylase 99.97
PLN03112 514 cytochrome P450 family protein; Provisional 99.97
PLN00168 519 Cytochrome P450; Provisional 99.97
PLN03018 534 homomethionine N-hydroxylase 99.97
PTZ00404 482 cytochrome P450; Provisional 99.97
PLN02738 633 carotene beta-ring hydroxylase 99.97
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.97
PLN02290 516 cytokinin trans-hydroxylase 99.96
PLN02394 503 trans-cinnamate 4-monooxygenase 99.96
PLN02936 489 epsilon-ring hydroxylase 99.96
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.96
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.96
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.95
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.95
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.95
PLN02500 490 cytochrome P450 90B1 99.95
PLN02196 463 abscisic acid 8'-hydroxylase 99.93
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.93
PLN02774 463 brassinosteroid-6-oxidase 99.93
PLN02302 490 ent-kaurenoic acid oxidase 99.92
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.91
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.9
PLN02648 480 allene oxide synthase 99.7
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.46
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=6.1e-37  Score=242.65  Aligned_cols=243  Identities=37%  Similarity=0.633  Sum_probs=205.1

Q ss_pred             CeeecCCeeEEEeCCHHHHHHHHHhcccCCCCCCc-chhhhhccCCCcceEecCCChhHHHHHHHHHHhhcCHHHHHhhH
Q 025878            1 MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPP-LQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSNAKINYFQ   79 (247)
Q Consensus         1 ~~~~~g~~~~vvi~~p~~i~~i~~~~~~~~~~r~~-~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~~~~~~   79 (247)
                      |++|+|+.|+|||||++.++|++++++..|++||. ......+..++.|++++.||+.|+.+||++...+|+.+.++...
T Consensus        63 ~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~  142 (489)
T KOG0156|consen   63 FTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFM  142 (489)
T ss_pred             EEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhH
Confidence            57999999999999999999999999999999997 23446666566799999889999999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCceehHHHHHHHHHHHHHHHhhccccCCch-hhHHHHHHHHHHHHhhhcCCCcccccc-
Q 025878           80 PIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYE-FDERGFENVVQEGMELIGKPNLGDYIP-  157 (247)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~dvi~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p-  157 (247)
                      ....++++.+++.+.+ ..+++++|+...+..++.++|++++||.+++..+ +...++.+.+.+.....+.+.+.+++| 
T Consensus       143 ~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~  221 (489)
T KOG0156|consen  143 EIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPF  221 (489)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhH
Confidence            8889999999999987 3334799999999999999999999999998753 455678999999999999888899999 


Q ss_pred             cccccc-ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCccHHHHHhcccCCCcccCCCcHHHHHHHH--HHhcccc
Q 025878          158 QITGLD-LQGLTKRLKAVAKAYDAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIEREHIKAIV--LFLGCST  234 (247)
Q Consensus       158 ~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--~~~AG~d  234 (247)
                      ++++++ ..+..+........+..++++.|+++++..+.+...|++|.||+..++++... +++++|...+  +++||+|
T Consensus       222 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtd  300 (489)
T KOG0156|consen  222 LLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGDEEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTD  300 (489)
T ss_pred             HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccc
Confidence            677663 23556666666767999999999999875411223899999998865433222 9999999999  9999999


Q ss_pred             cccccCCCCCC
Q 025878          235 YFINKPIFPLD  245 (247)
Q Consensus       235 Tta~t~~~~l~  245 (247)
                      |||+|+.|++.
T Consensus       301 Tta~Tl~Wa~a  311 (489)
T KOG0156|consen  301 TTATTLEWAMA  311 (489)
T ss_pred             hHHHHHHHHHH
Confidence            99999999863

>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
3qz1_A 496 Crystal Structure Of Bovine Steroid Of 21-Hydroxyla 6e-09
2hi4_A 495 Crystal Structure Of Human Microsomal P450 1a2 In C 5e-05
2f9q_A 479 Crystal Structure Of Human Cytochrome P450 2d6 Leng 1e-04
4i8v_A 491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 2e-04
3ruk_A 494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 3e-04
3qm4_A 479 Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Compl 3e-04
1og2_A 475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 5e-04
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase (P450c21) Length = 496 Back     alignment and structure 
Iteration: 1

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 18/238 (7%)
Query: 3   LRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVR 62
           LRLGL   +V++S +  E+ +    + FA RP + + K +S + ++ ++  Y   W+  +
Sbjct: 62  LRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHK 121
Query: 63  KICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAAR--ARCVVDISAKLSALSANMTCRM 120
           K+    LL   + +      +  +D L   F E  R  A   V I  + S L+ ++ C +
Sbjct: 122 KLTRSALLLGTRSSM-----EPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYL 176
Query: 121 VLGKKCSDYEFDERGFENVVQEGMELIGKPNLG--DYIPQITGLDLQGLTKRLKAVAKAY 178
             G K          F + VQ+ M+     ++   D +P +      GL  RLK   +  
Sbjct: 177 TFGNKEDTL---VHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLW-RLKQAIENR 232
Query: 179 DAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIER-----EHIKAIVLFLG 231
           D  +EK +  H +S    +  D  D ML   G +  E+   +      H+  + LF+G
Sbjct: 233 DHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIG 290
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6 Length = 479 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex Length = 479 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 2e-46
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 6e-45
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 1e-37
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 3e-33
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 5e-30
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 1e-25
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 4e-25
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 4e-25
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 1e-22
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 5e-21
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 2e-20
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 4e-19
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 4e-17
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 3e-16
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 1e-14
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 2e-14
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 7e-14
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 2e-13
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 2e-13
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 9e-11
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 4e-10
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 6e-10
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 9e-09
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 1e-06
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
 Score =  159 bits (405), Expect = 2e-46
 Identities = 37/242 (15%), Positives = 72/242 (29%), Gaps = 23/242 (9%)

Query: 1   MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKY-MSYQQKNFAMAPYGSYWR 59
              +LG + ++ V  P+      K+               Y   YQ+    +    + W+
Sbjct: 49  YREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWK 108

Query: 60  KVRKICTQNLLSNAKINYFQPIRKEE----LDLLIDYFKEAARARCVVDISAKLSALSAN 115
           K R    Q +++      F P+        + +L    K+A       DIS  L   +  
Sbjct: 109 KDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFE 168

Query: 116 MTCRMVLGKKCSDYEFDERG----FENVVQEGMELIGK-----PNLGDYIPQITGLDLQG 166
               ++ G++    E         F + + +            P+L            + 
Sbjct: 169 SITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRT---KTWKD 225

Query: 167 LTKRLKAVAKAYDAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIEREHIKAI 226
                  +    D + +    E  Q    +   D+  ++    G      K+  E IKA 
Sbjct: 226 HVAAWDVIFSKADIYTQNFYWELRQKGSVH--HDYRGILYRLLGDS----KMSFEDIKAN 279

Query: 227 VL 228
           V 
Sbjct: 280 VT 281
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query247
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.98
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.98
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.97
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.97
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.97
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.97
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.97
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.97
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.97
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.97
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.96
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.96
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.96
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.95
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.95
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.95
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.94
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.94
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.94
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.94
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.94
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.94
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.93
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.93
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.93
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.93
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.92
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.92
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.92
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.92
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.92
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.92
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.92
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.92
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.91
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.91
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.91
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.91
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.91
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.91
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.91
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.91
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.91
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.91
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.91
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.91
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.91
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.91
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.9
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.9
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.9
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.9
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.9
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.9
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.9
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.9
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.9
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.89
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.89
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.89
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.89
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.88
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.88
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.87
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.87
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.86
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.86
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.84
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.82
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.81
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.78
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.74
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.69
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.67
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.62
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 98.27
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=100.00  E-value=7.8e-33  Score=223.79  Aligned_cols=241  Identities=17%  Similarity=0.255  Sum_probs=187.3

Q ss_pred             CeeecCCeeEEEeCCHHHHHHHHHhcccCCCCCCcchhhhhccCCCcceEecCCChhHHHHHHHHHHhhcCH--HHHHhh
Q 025878            1 MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRKVRKICTQNLLSN--AKINYF   78 (247)
Q Consensus         1 ~~~~~g~~~~vvi~~p~~i~~i~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~--~~~~~~   78 (247)
                      |++++|+.++|+|+||+++++++.+++..|++|+..........++.|++++++|+.|+++||++.+. |+.  ..+..+
T Consensus        46 ~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~-f~~~~~~~~~~  124 (494)
T 3swz_A           46 YSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMAT-FALFKDGDQKL  124 (494)
T ss_dssp             EEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHHHHTTTTCSSSSSCSSHHHHHHHHHHHHH-TTTTSSSTTCH
T ss_pred             EEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHHhccCCCCeEeCCCCHHHHHHHHHHHHH-HHHhcchHHHH
Confidence            46899999999999999999999988889999987665555544445888887899999999999986 653  446778


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCceehHHHHHHHHHHHHHHHhhccccCCchhhHHHHHHHHHHHHhhhcCCCccccccc
Q 025878           79 QPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQ  158 (247)
Q Consensus        79 ~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~dvi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  158 (247)
                      ++.+.+++..+++.+.+  ..|+++|+...+.++++|+|+.++||.+++..++....+......+........+.+++||
T Consensus       125 ~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~  202 (494)
T 3swz_A          125 EKIICQEISTLCDMLAT--HNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPW  202 (494)
T ss_dssp             HHHHHHHHHHHHHHHHH--TTTEEECCHHHHHHHHHHHHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCG
T ss_pred             HHHHHHHHHHHHHHHHH--cCCCcccHHHHHHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence            99999999999999974  3567999999999999999999999998876554444444444444444444457778899


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCccHHHHHhcccCCC--------cccCCCcHHHHHHHH--H
Q 025878          159 ITGLDLQGLTKRLKAVAKAYDAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSE--------DTEKKIEREHIKAIV--L  228 (247)
Q Consensus       159 l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~--------~~~~~l~~~~i~~~~--~  228 (247)
                      +++++ ....+.+....+.+.+++..+++++++..+.....|+++.+++...+.        .....++++++..++  +
T Consensus       203 l~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~  281 (494)
T 3swz_A          203 LKIFP-NKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDI  281 (494)
T ss_dssp             GGTSC-CSHHHHHHHHHHHHHHHHHHHHHHHTTTCCTTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHH
T ss_pred             HHHcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHH
Confidence            88773 223455666777788888888988877654445679999999753211        112348999999988  9


Q ss_pred             HhcccccccccCCCCCC
Q 025878          229 FLGCSTYFINKPIFPLD  245 (247)
Q Consensus       229 ~~AG~dTta~t~~~~l~  245 (247)
                      ++||+|||++|++|++.
T Consensus       282 ~~AG~dTta~~l~~~l~  298 (494)
T 3swz_A          282 FGAGVETTTSVVKWTLA  298 (494)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             hhcchhHHHHHHHHHHH
Confidence            99999999999999864
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 247
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 2e-23
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 2e-20
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 3e-17
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 1e-15
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 2e-15
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 9e-14
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 6e-08
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 7e-08
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 2e-07
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 95.9 bits (237), Expect = 2e-23
 Identities = 34/233 (14%), Positives = 82/233 (35%), Gaps = 6/233 (2%)

Query: 1   MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAMAPYGSYWRK 60
             + LG    +V+    A  + L      F+ R  +     +            G  WR 
Sbjct: 39  FTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFA--NGERWRA 96

Query: 61  VRKICTQNLLSNAKINYFQPIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRM 120
           +R+     +            R +E    +      ++   ++D +    ++++N+ C +
Sbjct: 97  LRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGA-LLDNTLLFHSITSNIICSI 155

Query: 121 VLGKKCSDYEFDERGFENVVQEGMELIGKPNLGDYIPQITGLD-LQGLTKRLKAVAKAYD 179
           V GK+    +       ++  +   LI   +   +      L    G  +++    +  +
Sbjct: 156 VFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEIN 215

Query: 180 AFLEKIIDEHVQSKDENRTEDFVDVM--LSFEGSEDTEKKIEREHIKAIVLFL 230
            F+ + +++H  + D +   DF+DV      +   D   +   +++   VL L
Sbjct: 216 TFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSL 268
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query247
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.96
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.94
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.93
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.92
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.91
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.91
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.89
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.89
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.85
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.83
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.83
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.82
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.78
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.78
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.77
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.72
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.72
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.68
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.67
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.5
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 99.31
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=99.96  E-value=1.4e-28  Score=194.92  Aligned_cols=231  Identities=12%  Similarity=0.154  Sum_probs=167.1

Q ss_pred             CeeecCCeeEEEeCCHHHHHHHHHhcccCCCCCCcchhhhhccCCCcceEe-cCCChhHHHHHHHHHHhhcCHHHHHhhH
Q 025878            1 MHLRLGLMTTIVVSSPQAAEQFLKTHDLIFASRPPLQASKYMSYQQKNFAM-APYGSYWRKVRKICTQNLLSNAKINYFQ   79 (247)
Q Consensus         1 ~~~~~g~~~~vvi~~p~~i~~i~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-~~~g~~w~~~R~~~~~~~f~~~~~~~~~   79 (247)
                      |++++|+.++|+|+||++|++++.++...+..+........+.++  |++. ..+|++|+++|+++.+. |++++++.+.
T Consensus        38 f~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~g~~wk~~Rk~l~~~-fs~~~l~~~~  114 (453)
T d2ij2a1          38 FKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFAGD--GLFTSWTHEKNWKKAHNILLPS-FSQQAMKGYH  114 (453)
T ss_dssp             EEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHHTT--SGGGSCTTSHHHHHHHHHHGGG-GSTTTHHHHH
T ss_pred             EEEEeCCceEEEECCHHHHHHHHhcCCcccccccHhHHHHHhcCC--cEEecCCChHHHHHHHHHHHHH-hhhhhhhhhh
Confidence            578999999999999999999997655455444333232323222  4443 23499999999999975 9999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCceehHHHHHHHHHHHHHHHhhccccCCch-----hhHHHHHHHHHHHHhhhcCCCccc
Q 025878           80 PIRKEELDLLIDYFKEAARARCVVDISAKLSALSANMTCRMVLGKKCSDYE-----FDERGFENVVQEGMELIGKPNLGD  154 (247)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~dvi~~~~fg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  154 (247)
                      +.+.++++++++.|.+ ..+++++|+.+++.++++|+++.++||.+++...     +....+...+...+..     +..
T Consensus       115 ~~i~~~~~~li~~l~~-~~~~~~idl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  188 (453)
T d2ij2a1         115 AMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNK-----LQR  188 (453)
T ss_dssp             HHHHHHHHHHHHHHHT-CCTTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHT-----C--
T ss_pred             hhHHHHHHHHHHHhhh-cCCCCccchHHHHHHHhhhcchhcccccccchhhhccchHHHHhhhhccchhhhh-----hhh
Confidence            9999999999999975 3467799999999999999999999999876442     1122233333322221     122


Q ss_pred             cccccccccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCccHHHHHhcccCCCcccCCCcHHHHHHHH--HHhcc
Q 025878          155 YIPQITGLDLQGLTKRLKAVAKAYDAFLEKIIDEHVQSKDENRTEDFVDVMLSFEGSEDTEKKIEREHIKAIV--LFLGC  232 (247)
Q Consensus       155 ~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~--~~~AG  232 (247)
                      ..|++...  ....+.+.+..+.+.++++++++++++..  +...|+++.++....+ +.+..++++++.+++  +++||
T Consensus       189 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~~~~d~l~~ll~~~~~-~~~~~ls~~ei~~~~~~~l~ag  263 (453)
T d2ij2a1         189 ANPDDPAY--DENKRQFQEDIKVMNDLVDKIIADRKASG--EQSDDLLTHMLNGKDP-ETGEPLDDENIRYQIITFLIAG  263 (453)
T ss_dssp             -CTTSGGG--HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCSSHHHHHHHCCCT-TTCCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccc--hhhHHHHHHHHHHHHHHHHHHHhhhcccc--ccccchhhhhhhhccc-ccCcchhhhHHHhhhccccccc
Confidence            23332222  33345666777788889998888877653  4567999999877543 223459999999999  99999


Q ss_pred             cccccccCCCCCC
Q 025878          233 STYFINKPIFPLD  245 (247)
Q Consensus       233 ~dTta~t~~~~l~  245 (247)
                      +|||+++++|++.
T Consensus       264 ~~tta~~l~~~l~  276 (453)
T d2ij2a1         264 HETTSGLLSFALY  276 (453)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             cccchhhhhcchh
Confidence            9999999999864
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure